BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008069
(579 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum
GN=CRTISO PE=1 SV=1
Length = 615
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/517 (76%), Positives = 433/517 (83%), Gaps = 7/517 (1%)
Query: 68 SFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNF-NGSTLRSEDLGCGESERN 126
SF + N+L K + KPRY K D L N + L G +++
Sbjct: 5 SFMYPNSLLDGTCKTVALGDSKPRYNKQRSSCFDPLIIGNCTDQQQLCGLSWGVDKAKGR 64
Query: 127 RDFALM-AKTVMSVDNLVEIGGN---EGMSRGADDYDAIVIGSGIGGLVAATQLAVKGAR 182
R + K V+ VD VE G+ EG G+ YDAIVIGSGIGGLVAATQLAVKGA+
Sbjct: 65 RGGTVSNLKAVVDVDKRVESYGSSDVEGNESGS--YDAIVIGSGIGGLVAATQLAVKGAK 122
Query: 183 VLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDP 242
VLVLEKYVIPGGSSG+YERDGY FDVGSSVMFGFSDKGNLNLITQALAAVG ++EVIPDP
Sbjct: 123 VLVLEKYVIPGGSSGFYERDGYKFDVGSSVMFGFSDKGNLNLITQALAAVGRKLEVIPDP 182
Query: 243 TTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLE 302
TTVHFHLPNDLSVR+HREY DF+ EL SKFPHEKEG++ FY ECWKIFN+LNSLELKSLE
Sbjct: 183 TTVHFHLPNDLSVRIHREYDDFIEELVSKFPHEKEGIIKFYSECWKIFNSLNSLELKSLE 242
Query: 303 EPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTP 362
EPIYLFGQFFK+PLECLTLAYYLPQNAG+IARKYI+DP LLSFIDAECFIVST+NALQTP
Sbjct: 243 EPIYLFGQFFKKPLECLTLAYYLPQNAGSIARKYIRDPGLLSFIDAECFIVSTVNALQTP 302
Query: 363 MINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGV 422
MINASMVLCDRHFGGINYPVGGVG IAKSLAKGL D GS+ILY+ANVT +IL+ GKAVGV
Sbjct: 303 MINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLDDHGSQILYRANVTSIILDNGKAVGV 362
Query: 423 RLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEV 482
+LSDGR+FYAKTI+SNATRWDTFGKLLK E LPKEEENFQK YVKAPSFLSIHMGVKA+V
Sbjct: 363 KLSDGRKFYAKTIVSNATRWDTFGKLLKAENLPKEEENFQKAYVKAPSFLSIHMGVKADV 422
Query: 483 LPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGL 542
LPPDTDCHHFVLEDDW LE+PYGSIFLSIPTVLDSSLAPEGHHILHIFT SIEDWEGL
Sbjct: 423 LPPDTDCHHFVLEDDWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGL 482
Query: 543 AQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREV 579
+ KDY+AKKE+VA+ II+RLE LFPGLK SI F+EV
Sbjct: 483 SPKDYEAKKEVVAERIISRLEKTLFPGLKSSILFKEV 519
>sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO
PE=2 SV=1
Length = 615
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/513 (74%), Positives = 437/513 (85%), Gaps = 19/513 (3%)
Query: 73 NTLPFSDYKF---SR---MKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGCGESERN 126
N+L +YK SR +K +PR +K L L NF C S R
Sbjct: 20 NSLLSQNYKLFDNSRSFGLKSLRPRCQKDGLLYPKPL---NFGF---------CRVSRRK 67
Query: 127 RDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVL 186
R + +V+SVD +E G+ R + +YDAIVIGSGIGGLVAATQLAVKGA+VLVL
Sbjct: 68 RKPNFVLNSVLSVDKELESDETVGLGR-SREYDAIVIGSGIGGLVAATQLAVKGAKVLVL 126
Query: 187 EKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVH 246
EKY+IPGGSSGYYERDG+TFDVGSSVMFGFSDKGNLNLITQALAAVGC+MEVIPDP+TVH
Sbjct: 127 EKYLIPGGSSGYYERDGFTFDVGSSVMFGFSDKGNLNLITQALAAVGCKMEVIPDPSTVH 186
Query: 247 FHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIY 306
FHLP++LSV VHREY++F +ELTSKFPHEKEG+ FYGECWKIFNALNSLELKSLEEPIY
Sbjct: 187 FHLPSNLSVLVHREYNEFFSELTSKFPHEKEGIFKFYGECWKIFNALNSLELKSLEEPIY 246
Query: 307 LFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINA 366
LFGQFFK+P+ECLTLAYYLPQNAG+IARK+IKDP++LSFIDAECFIVST+NAL+TPMINA
Sbjct: 247 LFGQFFKKPMECLTLAYYLPQNAGDIARKFIKDPEVLSFIDAECFIVSTVNALKTPMINA 306
Query: 367 SMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD 426
SMVLCDRH+GGINYPVGGVGGIAKSLAKGL D+GSEI YKANV +I+E GKAVGVRL++
Sbjct: 307 SMVLCDRHYGGINYPVGGVGGIAKSLAKGLVDQGSEIQYKANVKSIIVENGKAVGVRLAN 366
Query: 427 GREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD 486
G E +AK IISNATRWDTFGKLLK ++LPKEEENFQKLY+KAPSFLSIH+GVK++VLPPD
Sbjct: 367 GNEIFAKNIISNATRWDTFGKLLKQDELPKEEENFQKLYIKAPSFLSIHLGVKSDVLPPD 426
Query: 487 TDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKD 546
TDCHHFVLEDDW+ LE PYGSIFLSIPTVLDSSLAPEG+HILHIFT SIEDW+G++QKD
Sbjct: 427 TDCHHFVLEDDWSNLEVPYGSIFLSIPTVLDSSLAPEGNHILHIFTTSSIEDWQGMSQKD 486
Query: 547 YDAKKELVADEIINRLENKLFPGLKQSIAFREV 579
Y+ KKELVADEII+RLE KLFPGL+ SI +EV
Sbjct: 487 YEKKKELVADEIISRLEKKLFPGLQSSIVLKEV 519
>sp|Q9M9Y8|CRTSO_ARATH Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana
GN=CRTISO PE=2 SV=2
Length = 595
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/433 (86%), Positives = 400/433 (92%), Gaps = 2/433 (0%)
Query: 149 EGMSR--GADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTF 206
+G R G YDAIVIGSGIGGLVAATQLAVK ARVLVLEKY+IPGGSSG+YERDGYTF
Sbjct: 67 QGTKRDGGESLYDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIPGGSSGFYERDGYTF 126
Query: 207 DVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVA 266
DVGSSVMFGFSDKGNLNLITQAL AVG +MEVIPDPTTVHFHLPN+LSVR+HREY DF+A
Sbjct: 127 DVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNNLSVRIHREYDDFIA 186
Query: 267 ELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP 326
ELTSKFPHEKEG+L FYG+CWKIFN+LNSLELKSLEEPIYLFGQFF++PLECLTLAYYLP
Sbjct: 187 ELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLP 246
Query: 327 QNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVG 386
QNAG IARKYIKDPQLLSFIDAECFIVST+NALQTPMINASMVLCDRH+GGINYPVGGVG
Sbjct: 247 QNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGVG 306
Query: 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFG 446
GIAKSLA+GL D+GSEI YKANV +IL+ GKAVGVRL+DGREF+AKTIISNATRWDTFG
Sbjct: 307 GIAKSLAEGLVDQGSEIQYKANVKSIILDHGKAVGVRLADGREFFAKTIISNATRWDTFG 366
Query: 447 KLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYG 506
KLLKGE+LPKEEENFQK+YVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDW LEEPYG
Sbjct: 367 KLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEPYG 426
Query: 507 SIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKL 566
SIFLSIPT+LDSSLAP+G HILHIFT SIEDWEGL K+Y+AKKE VA II RLE KL
Sbjct: 427 SIFLSIPTILDSSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKEDVAARIIQRLEKKL 486
Query: 567 FPGLKQSIAFREV 579
FPGL SI F+EV
Sbjct: 487 FPGLSSSITFKEV 499
>sp|Q52QW3|CRTS1_ONCHC Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO1 PE=2 SV=1
Length = 587
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/434 (79%), Positives = 395/434 (91%)
Query: 146 GGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYT 205
G G A++YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG+++RDG+T
Sbjct: 58 GSEAGKVEEAEEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFFQRDGFT 117
Query: 206 FDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFV 265
FDVGSSVMFGFSDKGNLNLITQAL AV C++ IPDPTTVHFHLP++LS+RVHREY F+
Sbjct: 118 FDVGSSVMFGFSDKGNLNLITQALEAVDCKLRTIPDPTTVHFHLPDNLSIRVHREYDMFI 177
Query: 266 AELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL 325
+EL + FPHEKEG+ FY ECWKIFN+LNSLELKSLEEP+YLFGQFF++P+ECLTLAYYL
Sbjct: 178 SELVNYFPHEKEGIRRFYNECWKIFNSLNSLELKSLEEPMYLFGQFFRKPVECLTLAYYL 237
Query: 326 PQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGV 385
PQNAG+IARK+IKDPQLLSFIDAECFIVST+ AL TPMINASMVLCDRHFGGINYPVGGV
Sbjct: 238 PQNAGDIARKFIKDPQLLSFIDAECFIVSTVKALHTPMINASMVLCDRHFGGINYPVGGV 297
Query: 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTF 445
GGIAK+LA GL +KGS++LYKANVTK++L+ GKAVGV+LS+GREF+AKT+ISNATRWDTF
Sbjct: 298 GGIAKALANGLVNKGSKLLYKANVTKILLKDGKAVGVKLSNGREFFAKTVISNATRWDTF 357
Query: 446 GKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPY 505
GKLLK E +P+EE+NF+K+Y+KAPSFLSIHMGVKA VLPPDTDCHHF+LED+W RLE PY
Sbjct: 358 GKLLKVEDIPQEEKNFKKIYLKAPSFLSIHMGVKAFVLPPDTDCHHFILEDNWGRLELPY 417
Query: 506 GSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENK 565
GSIFLSIPTVLD SLAPEGHHI HIFT SIE+WEGL+ K+Y+ KKELVADEII RLE K
Sbjct: 418 GSIFLSIPTVLDPSLAPEGHHIFHIFTTSSIENWEGLSHKEYEEKKELVADEIITRLEKK 477
Query: 566 LFPGLKQSIAFREV 579
LFPGLK S+ +EV
Sbjct: 478 LFPGLKDSVVLKEV 491
>sp|Q52QW2|CRTS2_ONCHC Prolycopene isomerase 2, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO2 PE=2 SV=1
Length = 587
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/434 (79%), Positives = 395/434 (91%)
Query: 146 GGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYT 205
G G A++YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG+++RDG+T
Sbjct: 58 GSEAGKVEEAEEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFFQRDGFT 117
Query: 206 FDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFV 265
FDVGSSVMFGFSDKGNLNLITQAL AV C++ IPDPTTVHFHLP++LS+RVHREY F+
Sbjct: 118 FDVGSSVMFGFSDKGNLNLITQALEAVDCKLRTIPDPTTVHFHLPDNLSIRVHREYDMFI 177
Query: 266 AELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL 325
+EL + FPHEKEG+ FY ECWKIFN+LNSLELKSLEEP+YLFGQFF++P+ECLTLA+YL
Sbjct: 178 SELVNYFPHEKEGIRRFYNECWKIFNSLNSLELKSLEEPMYLFGQFFRKPVECLTLAFYL 237
Query: 326 PQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGV 385
PQNAG+IARK+IKDPQLLSFIDAECFIVST+ AL TPMINASMVLCDRHFGGINYPVGGV
Sbjct: 238 PQNAGDIARKFIKDPQLLSFIDAECFIVSTVKALHTPMINASMVLCDRHFGGINYPVGGV 297
Query: 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTF 445
GGIAK+LA GL +KGS++LYKANVTK++L+ GKAVGV+LS+GREF+AKT+ISNATRWDTF
Sbjct: 298 GGIAKALANGLVNKGSKLLYKANVTKILLKDGKAVGVKLSNGREFFAKTVISNATRWDTF 357
Query: 446 GKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPY 505
GKLLK E +P+EE+NF+K+Y+KAPSFLSIHMGVKA VLPPDTDCHHF+LED+W RLE PY
Sbjct: 358 GKLLKVEDIPQEEKNFKKIYLKAPSFLSIHMGVKAFVLPPDTDCHHFILEDNWGRLELPY 417
Query: 506 GSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENK 565
GSIFLSIPTVLD SLAPEGHHI HIFT SIE+WEGL+ K+Y+ KKELVADEII RLE K
Sbjct: 418 GSIFLSIPTVLDPSLAPEGHHIFHIFTTSSIENWEGLSHKEYEEKKELVADEIITRLEKK 477
Query: 566 LFPGLKQSIAFREV 579
LFPGLK S+ +EV
Sbjct: 478 LFPGLKDSVVLKEV 491
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 179/438 (40%), Gaps = 43/438 (9%)
Query: 161 IVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKG 220
+VIG+G GGL A +L G ++LE+ PGG + + G+TFD G +V+ +D
Sbjct: 5 VVIGAGFGGLALAIRLQAAGIPTVLLEQRDKPGGRAYVWHDQGFTFDAGPTVI---TDPT 61
Query: 221 NLN-LITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGV 279
L L T A + + ++P + ++ + ++ A++T P + EG
Sbjct: 62 ALEALFTLAGRRMEDYVRLLPVKPFYRLCWESGKTLDYANDSAELEAQITQFNPRDVEGY 121
Query: 280 LAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKD 339
F +F L L S+ P F + + L L + Q+ ++I+D
Sbjct: 122 RRFLAYSQAVFQE-GYLRLGSV--PFLSFRDMLRAGPQLLKLQAW--QSVYQSVSRFIED 176
Query: 340 PQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADK 399
L +V N T I + +R +G + +P GG G + + K D
Sbjct: 177 EHLRQAFSFHSLLVGG-NPFTTSSIYTLIHALEREWG-VWFPEGGTGALVNGMVKLFTDL 234
Query: 400 GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEE 459
G EI A V ++++ + VRL+DGR F + SNA +T+ KLL + ++
Sbjct: 235 GGEIELNARVEELVVADNRVSQVRLADGRIFDTDAVASNADVVNTYKKLLGHHPVGQKRA 294
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFV------------------LEDDWNRL 501
+ + S ++ G+ P HH + L DD+
Sbjct: 295 AALERKSMSNSLFVLYFGLNQ---PHSQLAHHTICFGPRYRELIDEIFTGSALADDF--- 348
Query: 502 EEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINR 561
S++L P V D SLAP G F + + G A D+ + + D I +
Sbjct: 349 -----SLYLHSPCVTDPSLAPPG---CASFYVLAPVPHLGNAPLDWAQEGPKLRDRIFDY 400
Query: 562 LENKLFPGLKQSIAFREV 579
LE + PGL+ + + +
Sbjct: 401 LEERYMPGLRSQLVTQRI 418
>sp|P21685|CRTI_PANAN Phytoene desaturase (lycopene-forming) OS=Pantoea ananas GN=crtI
PE=1 SV=1
Length = 492
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 178/430 (41%), Gaps = 39/430 (9%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G GGL A +L G VL+LE+ PGG + YE G+TFD G +V+ +
Sbjct: 6 VIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVI------TD 59
Query: 222 LNLITQALAAVGCEM----EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
+ I + A G ++ E++P + + + A++ P + E
Sbjct: 60 PSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVE 119
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYI 337
G F +F L+L ++ P F + + L + ++ + YI
Sbjct: 120 GYRQFLDYSRAVFKE-GYLKLGTV--PFLSFRDMLRAAPQLAKLQAW--RSVYSKVASYI 174
Query: 338 KDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLA 397
+D L +V N T I + +R + G+ +P GG G + + + K
Sbjct: 175 EDEHLRQAFSFHSLLVGG-NPFATSSIYTLIHALEREW-GVWFPRGGTGALVQGMIKLFQ 232
Query: 398 DKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE 457
D G E++ A V+ + K V L DGR F + + SNA T+ LL Q P
Sbjct: 233 DLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS--QHPAA 290
Query: 458 EENFQKLYVK--APSFLSIHMGVKAEVLPPDTDCHHFV---------LEDDWNR--LEEP 504
+ KL K + S ++ G+ D HH V +++ +N L E
Sbjct: 291 VKQSNKLQTKRMSNSLFVLYFGLNHH---HDQLAHHTVCFGPRYRELIDEIFNHDGLAED 347
Query: 505 YGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLEN 564
+ S++L P V DSSLAPEG + + + G A D+ + + D I LE
Sbjct: 348 F-SLYLHAPCVTDSSLAPEG---CGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQ 403
Query: 565 KLFPGLKQSI 574
PGL+ +
Sbjct: 404 HYMPGLRSQL 413
>sp|Q5BLE8|RETST_DANRE Putative all-trans-retinol 13,14-reductase OS=Danio rerio GN=retsat
PE=2 SV=1
Length = 607
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 203/461 (44%), Gaps = 44/461 (9%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSS 211
SR +D DA+V+GSGIGGL A LA G +VLVLE++ GG ++ G+ FDVG
Sbjct: 57 SRVPEDLDAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGGCCHTFKEQGFEFDVGIH 116
Query: 212 VMFGFSDKGNLNLITQALAAVGCEMEVIPDP-TTVHFHLPNDLSVRVHREYSD---FVAE 267
+ S+ L I + + + + +P V P + R+++ YS ++ E
Sbjct: 117 YIGELSNHKPLRCIIDQMTNGQLQWDPLENPFDNVVIGPPENR--RIYQIYSGRKRYMDE 174
Query: 268 LTSKFPHEKEGVLAFYGECWKIFNALNSLE-LKSLEEPIYLFGQFFKRPLECLTLAYYLP 326
L FP E++ + + C ++ + + LK L PI F + + Y
Sbjct: 175 LKKCFPGEEKAIDEYVRLCKEVGQGVWVMVLLKFLPTPIANFLVRTGLANRLTSFSRYAS 234
Query: 327 QNAGNIARKYIKDPQLLSFIDAECFIVSTINAL-QTPMINASMVLCDRHFGGINYPVGGV 385
++ ++ + ++ L + + +I T + + + ++ + + G YP GG
Sbjct: 235 RSLTDVVNELTQNKDLRAVL---SYIFGTYGKIPKEASFSMHSLIVNHYMNGAWYPKGGA 291
Query: 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDGRE---FYAKTIISNATR 441
IA + + G +L +A V +++L K A+GV + G+E A +IS+A
Sbjct: 292 TEIAYHMIPIIEKAGGAVLVRAPVNRILLNDAKEAIGVSVLKGQEEVHVRAPIVISDAGI 351
Query: 442 WDTFGKLLKG--EQLPKEEENFQKLYVKAPSFLSIHMGVKA--EVLPPDTDCHHFVLEDD 497
++T+ LL + +P ++ L S LSI +G+ E L D + E++
Sbjct: 352 FNTYEYLLPKDVQTMPAIQKQLSMLQ-HGDSGLSIFIGLDGTKEELGLKADNYFIYPENN 410
Query: 498 WNRLEEPYGS------------IFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQ- 544
+ L E Y S IF++ P+ DS+ PE T+ S ++E +
Sbjct: 411 IDELLEDYRSGNREESAKKNPLIFVASPSAKDSTW-PERTPGKSTLTVVSFANYEWFEEW 469
Query: 545 ---------KDYDAKKELVADEIINRLENKLFPGLKQSIAF 576
DY KEL + I+ + +++P +K I +
Sbjct: 470 KDDKVKNRSTDYKQLKELFINYILEAV-TEIYPKIKDRIEY 509
>sp|P54978|CRTI_PARSN Phytoene desaturase (lycopene-forming) OS=Paracoccus sp. (strain
N81106 / MBIC 01143) GN=crtI PE=3 SV=2
Length = 501
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 171/432 (39%), Gaps = 39/432 (9%)
Query: 160 AIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDK 219
AIVIG+G GGL A +L G ++E PGG + + G+ FD G +V+ +D
Sbjct: 11 AIVIGAGFGGLALAIRLQSAGIATTLVEARDKPGGRAYVWHDQGHLFDAGPTVI---TDP 67
Query: 220 GNLNLITQALAAVGCEMEVIPDPTTVHFHL--PNDLSVRVHREYSDFVAELTSKFPHEKE 277
L + AL +V P + + L P E ++ P + E
Sbjct: 68 DALKEL-WALTGQDMARDVTLMPVSPFYRLMWPGGKVFDYVNEADQLERQIAQFNPDDLE 126
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYI 337
G F +++ ++L ++ P GQ K + L Y +A +A +I
Sbjct: 127 GYRRFRDYAEEVYQE-GYVKLGTV--PFLKLGQMLKAAPALMKLEAYKSVHA-KVA-TFI 181
Query: 338 KDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLA 397
KDP L +V N T I A + +R GG+ + GG + +
Sbjct: 182 KDPYLRQAFSYHTLLVGG-NPFSTSSIYALIHALERR-GGVWFAKGGTNQLVAGMVALFE 239
Query: 398 DKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE 457
G ++L A V ++ + +A GV L+DGR A + SN + LL +
Sbjct: 240 RLGGQMLLNAKVARIDTDGPRATGVTLADGRALTADMVASNGDVMHNYRDLLG--HTARG 297
Query: 458 EENFQKLYVK--APSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN----------RLEEPY 505
+ + L K + S +H G++ P D H + + +L E +
Sbjct: 298 QSRAKSLNAKRWSMSLFVLHFGLREA--PKDVAHHTILFGPRYKELVNEIFKGPKLAEDF 355
Query: 506 GSIFLSIPTVLDSSLAPEG---HHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRL 562
S++L P D +AP G H++L G A D+ + AD I+ L
Sbjct: 356 -SLYLHSPCTTDPEMAPPGMSTHYVLAPVPHL------GRADIDWAVEGPRYADRILASL 408
Query: 563 ENKLFPGLKQSI 574
E +L P L+ ++
Sbjct: 409 EERLIPNLRANL 420
>sp|Q8VHE9|RETST_RAT All-trans-retinol 13,14-reductase OS=Rattus norvegicus GN=Retsat
PE=2 SV=1
Length = 609
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 168/380 (44%), Gaps = 36/380 (9%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
+SR + DA+VIGSGIGGL +A LA G RVLVLE++ GG + +G FD G
Sbjct: 60 VSRVPEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGENGLEFDTGI 119
Query: 211 SVMFGFSDKGN-----LNLITQALAAVGCEMEVIPDPTTVHFHL---PNDLS-VRVHREY 261
+ G +GN L+ IT+ +++ P + + PN ++
Sbjct: 120 HYI-GRMREGNIGRFILDQITEG------QLDWAPMASPFDLMILEGPNGRKEFPMYSGR 172
Query: 262 SDFVAELTSKFPHEKEGVLAFYGECWKIF--NALNSLELKSLEEPIYLFGQFFKRPLECL 319
+++ L KFP E E V+ Y E K+ +++ LK L P+ F
Sbjct: 173 KEYIQGLKEKFPKE-EAVIDKYMELVKVVAHGVSHAILLKFLPLPLTQLLNKFGLLTRFS 231
Query: 320 TLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTP---MINASMVLCDRHFG 376
Q+ + ++ P+L + + +I+ T TP + +L D +
Sbjct: 232 PFCRASTQSLAEVLKQLGASPELQAVLS---YILPTYGV--TPSHTTFSLHALLVDHYIQ 286
Query: 377 GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YA 432
G YP G IA + G +L +A V V+L+ G+A GV + G+E Y
Sbjct: 287 GAYYPRRGSSEIAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQELVNIYC 346
Query: 433 KTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAP--SFLSIHMGVKA--EVLPPDTD 488
+ISNA ++T+ LL E + + ++L + P S LSI + +K E L +
Sbjct: 347 PVVISNAGMFNTYQHLLP-ESVRYLPDVKKQLTMVKPGLSMLSIFICLKGTKEELKLQST 405
Query: 489 CHHFVLEDDWNRLEEPYGSI 508
++ + D ++ E Y S+
Sbjct: 406 NYYVYFDTDMDKAMECYVSM 425
>sp|P54980|CRTI_RHOS4 Phytoene desaturase (neurosporene-forming) OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=crtI PE=3 SV=2
Length = 518
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 190/446 (42%), Gaps = 44/446 (9%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
+S +D A+VIGSG+GGL AA +L KG RV V++K +PGG ++G+ FD+G
Sbjct: 4 ISPASDADRALVIGSGLGGLAAAMRLGAKGWRVTVIDKLDVPGGRGSSITQEGHRFDLGP 63
Query: 211 SVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTS 270
+++ + +L ++E+ P P+ V + AE+
Sbjct: 64 TIVT--VPQSLRDLWKTCGRDFDADVELKPIDPFYEVRWPDGSHFTVRQSTEAMKAEVAR 121
Query: 271 KFPHEKEGVLAFYGEC----WKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP 326
P + G F + W + L + L + I + F + +
Sbjct: 122 LSPGDVAGYEKFLKDSEKRYWFGYEDLGRRSMHKLWDLIKVLPTF-----GMMRADRSVY 176
Query: 327 QNAGNIARKYIKDPQL---LSF----IDAECFIVSTINALQTPMINASMVLCDRHFGGIN 379
Q+A +KD +L LSF I + F V+++ L + + ++ FG ++
Sbjct: 177 QHAA----LRVKDERLRMALSFHPLFIGGDPFNVTSMYILVSQL--------EKEFG-VH 223
Query: 380 YPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNA 439
Y +GGV IA ++AK + +G V ++++E+G A GVRL+ G A ++SNA
Sbjct: 224 YAIGGVAAIAAAMAKVIEGQGGSFRMNTEVDEILVEKGTATGVRLASGEVLRAGLVVSNA 283
Query: 440 TRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKA-EVLPPDTDCHHFVLEDDW 498
T+ +LL+ + + K + + G K + + PD H V +
Sbjct: 284 DAGHTYMRLLRNHPRRRWTDAHVKSRRWSMGLFVWYFGTKGTKGMWPDVGHHTIVNAPRY 343
Query: 499 NRLEEPY---------GSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDA 549
L E S+++ P++ D ++APEG + + + + D+ A
Sbjct: 344 KGLVEDIFLKGKLAKDMSLYIHRPSITDPTVAPEGDDTF--YALSPVPHLKQAQPVDWQA 401
Query: 550 KKELVADEIINRLENKLFPGLKQSIA 575
E + ++ LE + PG+ + I
Sbjct: 402 VAEPYRESVLEVLEQSM-PGIGERIG 426
>sp|Q64FW2|RETST_MOUSE All-trans-retinol 13,14-reductase OS=Mus musculus GN=Retsat PE=1
SV=3
Length = 609
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 171/385 (44%), Gaps = 46/385 (11%)
Query: 151 MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGS 210
+SR + DA+VIGSGIGGL +A LA G RVLVLE++ GG + +G FD G
Sbjct: 60 VSRVPEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGENGLEFDTGI 119
Query: 211 SVMFGFSDKGN-----LNLITQALAAVGCEMEVIPDPTTVHFHL---PNDLS-VRVHREY 261
+ G +GN L+ IT+ +++ P + + PN ++
Sbjct: 120 HYI-GRMREGNIGRFILDQITEG------QLDWAPMASPFDLMILEGPNGRKEFPMYSGR 172
Query: 262 SDFVAELTSKFPHEKEGVLAFYGECWKIF--NALNSLELKSLEEPIYL----FGQFFKRP 315
+++ L KFP E E V+ Y E K+ +++ LK L P+ FG +
Sbjct: 173 KEYIQGLKKKFPKE-EAVIDKYMELVKVVARGVSHAVLLKFLPLPLTQLLSKFGLLTRFS 231
Query: 316 LECL----TLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC 371
C +LA L Q + + + LS+I + + A + +L
Sbjct: 232 PFCRASTQSLAEVLQQLGASRELQAV-----LSYIFPTYGVTPSHTAF-----SLHALLV 281
Query: 372 DRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF 430
D + G YP GG IA + G +L +A V V+L+ G+A GV + G+E
Sbjct: 282 DHYIQGAYYPRGGSSEIAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQEL 341
Query: 431 ---YAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAP--SFLSIHMGVKA--EVL 483
Y +ISNA ++T+ LL E + + ++L + P S LSI + +K E L
Sbjct: 342 VNIYCPVVISNAGMFNTYQHLLP-ETVRHLPDVKKQLAMVRPGLSMLSIFICLKGTKEDL 400
Query: 484 PPDTDCHHFVLEDDWNRLEEPYGSI 508
+ ++ + D ++ E Y S+
Sbjct: 401 KLQSTNYYVYFDTDMDKAMERYVSM 425
>sp|P17054|CRTI_RHOCB Phytoene desaturase (neurosporene-forming) OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=crtI PE=1 SV=1
Length = 524
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 205/467 (43%), Gaps = 86/467 (18%)
Query: 148 NEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFD 207
EGM R A+VIG+G+GGL AA +L KG +V V+++ PGG + G+ FD
Sbjct: 5 TEGMGR------AVVIGAGLGGLAAAMRLGAKGYKVTVVDRLDRPGGRGSSITKGGHRFD 58
Query: 208 VGSSVMFGFSDKGNLNLITQALAAVGCEME----VIPDPTTVHFHLPNDLSVRVHREYSD 263
+G +++ D+ + + A G + + ++P P+ + + +
Sbjct: 59 LGPTIVT-VPDR-----LRELWADCGRDFDKDVSLVPMEPFYTIDFPDGEKYTAYGDDAK 112
Query: 264 FVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECL-TLA 322
AE+ P + EG F +++A E + + ++P+ L L
Sbjct: 113 VKAEVARISPGDVEGFRHF------MWDAKARYE--------FGYENLGRKPMSKLWDLI 158
Query: 323 YYLP--------QNAGNIARKYIKDPQL---LSF----IDAECFIVSTINALQTPMINAS 367
LP ++ A+K +KD L LSF I + F V+++ L + +
Sbjct: 159 KVLPTFGWLRADRSVYGHAKKMVKDDHLRFALSFHPLFIGGDPFHVTSMYILVSQL---- 214
Query: 368 MVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSD 426
++ FG ++Y +GGV IA ++AK + D+G E+ V ++++ + GKA G+RL D
Sbjct: 215 ----EKKFG-VHYAIGGVQAIADAMAKVITDQGGEMRLNTEVDEILVSRDGKATGIRLMD 269
Query: 427 GREFYAKTIISNATRWDTFGKLLKG-EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPP 485
G E A+ ++SNA T+ +LL+ ++ +E K F+ + G K
Sbjct: 270 GTELPAQVVVSNADAGHTYKRLLRNRDRWRWTDEKLDKKRWSMGLFV-WYFGTKGTAKMW 328
Query: 486 DTDCHHFVLEDDWNRLEEPYGSIFLS------------IPTVLDSSLAPEGHHILHIFTI 533
HH V+ R +E IF+ P+V D + AP+G ++ +
Sbjct: 329 KDVGHHTVVVG--PRYKEHVQDIFIKGELAEDMSLYVHRPSVTDPTAAPKGDDTFYVLSP 386
Query: 534 C------SIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSI 574
+ DW A+K Y AK ++ +E +L PG+ + I
Sbjct: 387 VPNLGFDNGVDWSVEAEK-YKAK-------VLKVIEERLLPGVAEKI 425
>sp|Q3MHH6|PYRD2_BOVIN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Bos taurus GN=PYROXD2 PE=2 SV=1
Length = 581
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 187/495 (37%), Gaps = 97/495 (19%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGF 216
+YDA+V+G+G GLVAA L G V E+ + GG++ V ++ GF
Sbjct: 34 EYDAVVVGAGHNGLVAAAYLQRFGVNTAVFERRHVIGGAA-----------VTEEIVPGF 82
Query: 217 SDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLS---------------------V 255
L++ + E+E+ +H P + V
Sbjct: 83 KFSRASYLLSLLRPQIYSELELKKHGLRLHLRNPYSFTPMLEEGTGGKVPRSLLLGTDMV 142
Query: 256 RVHREYSDFVAELTSKFPHEKEGVLAFYG-----------------ECWKIFNALNSLEL 298
++ + F + FP + AF E ++ + L L+
Sbjct: 143 ENQKQIAQFSKKDAQAFPKYE----AFMDRLALAIDPLLDSAPVDLEAFQRGSLLQRLKS 198
Query: 299 KSLEEPIYLFGQFFKRPLECLTLAYY--LPQNAGNIARKYIKDPQLLSFIDAECFIVSTI 356
S +P++ G L YY L A + ++ + L + + + I
Sbjct: 199 LSTLKPLWQAGCILGAQLP----QYYQVLTAPAAKVLDQWFESEPLKATLATDAVI---- 250
Query: 357 NALQTPMINASMVLCDRHF--------GGINYPVGGVGGIAKSLAKGLADKGSEILYKAN 408
A+ P I S + H G Y GG+G ++ ++A G I +
Sbjct: 251 GAMTNPYIPGSGYVLLHHVMGSLEGVRGAWGYVQGGMGALSDAIASSATAHGVSIFTEKT 310
Query: 409 VTKVILEQGKAV-GVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE---------- 457
V KV + G V GV L DG E +K ++SNA+ TF KL E LP+E
Sbjct: 311 VAKVQVSSGGRVQGVVLQDGSEVRSKVVLSNASPQITFLKLTPQEWLPEEFVARIAQLDT 370
Query: 458 EENFQKLYV---KAPSFLSIHMGVKAEVLP----------PDTDCHHFVLEDDWNRLEEP 504
+ K+ V + P FL+ + LP DT H ED + L
Sbjct: 371 KSPVTKINVAVNRLPDFLAAPNTPGDQPLPHHQCSIHLNCEDTLLVHQAFEDTLDGLPSK 430
Query: 505 YGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLEN 564
I L IP+ LD +LAP G H++ +FT + G D + ++ AD + + +E
Sbjct: 431 RPLIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAGGKAWD-EQQRNTYADRVFDCIE- 488
Query: 565 KLFPGLKQSIAFREV 579
PG K S+ R++
Sbjct: 489 AYAPGFKGSVVGRDI 503
>sp|Q3U4I7|PYRD2_MOUSE Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2
Length = 580
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 193/500 (38%), Gaps = 108/500 (21%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGF 216
+YDA+VIG+G GLVAA L G V E+ + GG++ V ++ GF
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAA-----------VTEEIIPGF 82
Query: 217 SDKGNLNLITQALAAVGCEMEVIPDPTTVHFH----------------LPNDLSVRV--- 257
L++ + ++E+ +H LP L +
Sbjct: 83 KFSRASYLLSLLRPQICTDLELKKHGLKLHLRDPYSFTPMLEEGTLNRLPRSLLLGTDMA 142
Query: 258 --HREYSDFVAELTSKFPHE---KEGVLAF---------------YGECWKIFNALNSLE 297
+E S F + FP E K VLA +G + AL++L
Sbjct: 143 ANQKEISQFSRKDAQAFPREEFMKRLVLAIDPLLDAAPVDTTAFHHGSLLQRLGALSTL- 201
Query: 298 LKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTIN 357
K L + G + E LT + ++ + L + + + + I
Sbjct: 202 -KPLLKAGRTLGAQLPQYCEVLTAPI------SKVLDQWFESEPLKATLATD----AVIG 250
Query: 358 ALQTPMINASMVLCDRHF--------GGINYPVGGVGGIAKSLAKGLADKGSEILYKANV 409
A+ +P S + H G +Y GG+G ++ ++A A +G+ I + V
Sbjct: 251 AMTSPHTPGSGYVLLHHVMGSLEGTQGAWSYVQGGMGALSDAIASSAATRGASIFTEKTV 310
Query: 410 TKV-ILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLP----------KEE 458
KV + +G+ GV L DG E ++ ++S A+ TF +L E LP +
Sbjct: 311 AKVQVNSEGRVQGVTLQDGEEVRSRVVLSCASPQVTFLELTPQEWLPGAFVKRISQLDTQ 370
Query: 459 ENFQKLYV---KAPSF----------------LSIHMGVKAEVLPPDTDCHHFVLEDDWN 499
K+ V + P+F SIH+ + DT H ED
Sbjct: 371 SPVTKINVAVDRLPNFQAAPNAPGDQPQGHHQCSIHLNCE------DTLLLHQAFEDAKG 424
Query: 500 RLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEII 559
L I L IP+ LD +LAP G H++ +FT + G + + +K AD++
Sbjct: 425 GLPSQKPMIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAG-GKVWNEQEKNTYADKVF 483
Query: 560 NRLENKLFPGLKQSIAFREV 579
+ +E PG K+S+ R++
Sbjct: 484 DCIE-AYAPGFKRSVLARDI 502
>sp|Q5RAP5|PYRD2_PONAB Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Pongo abelii GN=PYROXD2 PE=2 SV=1
Length = 581
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 34/258 (13%)
Query: 354 STINALQTPMINAS-MVLCDRHFGGI-------NYPVGGVGGIAKSLAKGLADKGSEILY 405
+ I A+ +P S VL GG+ Y GG+G ++ ++A G+ I
Sbjct: 248 AVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFT 307
Query: 406 KANVTKV-ILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE-EENFQK 463
+ V KV + +G GV L DG E +K ++SN + TF KL E LP+E E +
Sbjct: 308 EKTVAKVQVNSEGCVQGVVLEDGTEVRSKVVLSNTSPQITFLKLTPQEWLPEEFLERISQ 367
Query: 464 LYVKA------------PSFLSIHMGVKAEVLP----------PDTDCHHFVLEDDWNRL 501
L ++ PSFL+ + + LP DT H ED + L
Sbjct: 368 LDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGL 427
Query: 502 EEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINR 561
I L IP+ LD LAP G H++ +FT + G D + +++ AD + +
Sbjct: 428 PSHRPIIELCIPSSLDPPLAPSGCHVVSLFTQYTPYTLAGGKAWD-EQERDAYADRVFDC 486
Query: 562 LENKLFPGLKQSIAFREV 579
+E PG K S+ R++
Sbjct: 487 VE-VYAPGFKDSVVGRDI 503
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196
+YDA+VIG+G GLV A L G V E+ + GG++
Sbjct: 34 EYDAVVIGAGHNGLVVAAYLQRLGVNTAVFERRHVIGGAA 73
>sp|Q8N2H3|PYRD2_HUMAN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Homo sapiens GN=PYROXD2 PE=2 SV=2
Length = 581
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 34/258 (13%)
Query: 354 STINALQTPMINAS-MVLCDRHFGGI-------NYPVGGVGGIAKSLAKGLADKGSEILY 405
+ I A+ +P S VL GG+ Y GG+G ++ ++A G+ I
Sbjct: 248 AVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFT 307
Query: 406 KANVTKV-ILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE-EENFQK 463
+ V KV + +G GV L DG E +K ++SN + TF KL E LP+E E +
Sbjct: 308 EKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEEFLERISQ 367
Query: 464 LYVKAP------------SFLSIHMGVKAEVLP----------PDTDCHHFVLEDDWNRL 501
L ++P SFL+ + + LP DT H ED + L
Sbjct: 368 LDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGL 427
Query: 502 EEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINR 561
I L IP+ LD +LAP G H++ +FT G D + +++ AD + +
Sbjct: 428 PSHRPVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWD-EQERDAYADRVFDC 486
Query: 562 LENKLFPGLKQSIAFREV 579
+E PG K S+ R++
Sbjct: 487 IE-VYAPGFKDSVVGRDI 503
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196
+YDA+VIG+G GLVAA L G V E+ + GG++
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAA 73
>sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Rattus norvegicus GN=Pyroxd2 PE=2 SV=1
Length = 581
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 190/495 (38%), Gaps = 97/495 (19%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGF 216
+YDA+VIG+G GLVAA L G V E+ + GG++ V ++ GF
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAA-----------VTEEIIPGF 82
Query: 217 SDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRV------------------- 257
L++ + ++E+ +H P + +
Sbjct: 83 KFSRASYLLSLLRPQIYTDLELKKHGLKLHLRNPYSFTPMLEEGTLSKPPRSLLLGTDVA 142
Query: 258 --HREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNA----LNSLELKSLEEPIYLFGQF 311
++ S F + FP +E + + +A + +L+ SL + +
Sbjct: 143 ENQKQISQFSRKDAQAFPRYEEFMKRLVLAIDPLLDAAPVDIAALQHGSLLQRLRALSTL 202
Query: 312 FKRPL--ECLTLAYYLPQ-------NAGNIARKYIKDPQLLSFIDAECFIVSTINALQTP 362
RPL TL LPQ + ++ + L + + + + I A+ +P
Sbjct: 203 --RPLLKAGRTLGAQLPQYYEVLTAPISKVLDQWFESEPLKATLATD----AVIGAMTSP 256
Query: 363 MINASMVLCDRHF--------GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKV-I 413
S + H G +Y GG+G ++ ++A G+ I + V KV +
Sbjct: 257 HTPGSGYVLLHHVMGSLEGMQGAWSYVQGGMGALSDAIASSATAHGASIFTEKTVAKVQV 316
Query: 414 LEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLP----------KEEENFQK 463
+G+ GV L G E ++ ++S A+ TF +L E LP + K
Sbjct: 317 NSEGRVQGVVLQGGEEVRSRVVLSCASPQVTFLELTPQEWLPGAFVKRISQLDTQSPVTK 376
Query: 464 LYV---KAPSF----------------LSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEP 504
+ V + P+F SIH+ + DT H ED L
Sbjct: 377 INVAVDRLPNFQAAPNAPGDQPQAHHQCSIHLNCE------DTLLLHQAFEDAKGGLPSQ 430
Query: 505 YGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLEN 564
I L IP+ LD +LAP G H++ +FT + G D + KK AD++ + +E
Sbjct: 431 RPMIELCIPSSLDPTLAPTGCHVVSLFTQYTPYTLAGGKVWD-EQKKNTYADKVFDCIE- 488
Query: 565 KLFPGLKQSIAFREV 579
PG K+S+ R++
Sbjct: 489 AYAPGFKRSVLGRDI 503
>sp|Q7A3E2|CRTN_STAAN Dehydrosqualene desaturase OS=Staphylococcus aureus (strain N315)
GN=crtN PE=1 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q99R76|CRTN_STAAM Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtN PE=3 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|O07855|CRTN_STAAE Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Newman)
GN=crtN PE=1 SV=2
Length = 502
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q2FV60|CRTN_STAA8 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain NCTC
8325) GN=crtN PE=3 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q2FDU6|CRTN_STAA3 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain USA300)
GN=crtN PE=3 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q8NUQ6|CRTN_STAAW Dehydrosqualene desaturase OS=Staphylococcus aureus (strain MW2)
GN=crtN PE=3 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q6G6B3|CRTN_STAAS Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MSSA476) GN=crtN PE=3 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q5HCY9|CRTN_STAAC Dehydrosqualene desaturase OS=Staphylococcus aureus (strain COL)
GN=crtN PE=3 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 174/395 (44%), Gaps = 48/395 (12%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGCMNQLKKDGFTFDMGPTIVM------M 58
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHF----HLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
++ A G E + + + + +D + V + ++ L S P
Sbjct: 59 PDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDLAELQQMLESIEPGSTH 118
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAG 330
G ++F + +K + Y + +++P + + + +A
Sbjct: 119 GFMSFLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHAD 168
Query: 331 NIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAK 390
+ YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+
Sbjct: 169 QLIEHYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQ 226
Query: 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGK 447
LA+ D G I A + ++I++ +A ++++ D R+F I+ A + + +
Sbjct: 227 GLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAE 283
Query: 448 LLKGEQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEE 503
L + P ++ L +FL +++G+ +V H+ + DD+ +EE
Sbjct: 284 SLMPDFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEE 341
Query: 504 PY-------GSIFLSIPTVLDSSLAPEGHHILHIF 531
+ SI++ +P V D SLAPEG +++
Sbjct: 342 IFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q2YWE8|CRTN_STAAB Dehydrosqualene desaturase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtN PE=3 SV=1
Length = 502
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 173/391 (44%), Gaps = 40/391 (10%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++ +
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNTNVGGRMNQLKKDGFTFDMGPTIVMMPDVYKD 64
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLA 281
+ + E+ + V+F D + V + ++ L S P G ++
Sbjct: 65 VFTMCGKNYEDYIELRQLRYIYDVYFD--RDDRITVPTDLAELQHMLESIEPGSTHGFMS 122
Query: 282 FYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAGNIAR 334
F + +K + Y + +++P + + + +A +
Sbjct: 123 FLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHADQLIE 172
Query: 335 KYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAK 394
YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+ LA+
Sbjct: 173 HYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQGLAQ 230
Query: 395 GLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGKLLKG 451
D G I A + ++I++ +A ++++ D R+F I+ A + + + L
Sbjct: 231 LNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAESLMP 287
Query: 452 EQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEEPY-- 505
+ P ++ L +FL +++G+ +V H+ + DD+ +EE +
Sbjct: 288 DFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFSDDFRGNIEEIFEG 345
Query: 506 -----GSIFLSIPTVLDSSLAPEGHHILHIF 531
SI++ +P V D SLAPEG +++
Sbjct: 346 RLSYDPSIYVYVPAVADKSLAPEGKTGIYVL 376
>sp|Q64FG0|RETST_MACFA All-trans-retinol 13,14-reductase OS=Macaca fascicularis GN=RETSAT
PE=2 SV=1
Length = 610
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 206/480 (42%), Gaps = 86/480 (17%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSS 211
SR + D +VIGSG GGL AA LA G RVLVLE++ GG+ + +G FD G
Sbjct: 62 SRVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGACHTFGENGLEFDTGIH 121
Query: 212 VMFGFSDKGN-----LNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSV----RVHREYS 262
+ G ++G+ L+ IT+ +++ +P + P D+ V +EY
Sbjct: 122 YI-GRMEEGSIGRFILDQITEG------QLDWVPMSS------PFDIMVLEGPNGRKEYP 168
Query: 263 DFVAE------LTSKFPHEKEGVLAFYGECWKIFN--ALNSLELKSLEEPIYLFGQFFKR 314
+ E L KFP E E ++ Y + K+ + +++ LK L P+ Q R
Sbjct: 169 MYSGEKAYIQGLKEKFPQE-EAIIDKYIKLVKVVSNGVAHAILLKFLPLPVI---QLLDR 224
Query: 315 PLECLTLAYYLP------QNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINA-S 367
C L + P Q+ + ++ +L + + +I T TP +A S
Sbjct: 225 ---CGLLTRFSPFLHASTQSLAEVLQQLGASSELQAVLS---YIFPTYGV--TPRHSAFS 276
Query: 368 M--VLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRL 424
M +L + + G YP GG IA + G +L +A V V+L+ GKA GV +
Sbjct: 277 MHALLVNHYLKGAFYPRGGSSEIAFHTIPVIQRAGGAVLTRATVQSVLLDSAGKACGVSV 336
Query: 425 SDGREF---YAKTIISNATRWDTFGKLLKGEQ--LP--KEEENFQKLYVKAPSFLSIHMG 477
G E Y ++SNA ++T+ LL G LP K++ + + S G
Sbjct: 337 KKGHELVNIYCPVVVSNAGLFNTYEHLLPGNARCLPGVKQQLGMVRPGLGMMSVFICLQG 396
Query: 478 VKAEVLPPDTDCHHFVLED-DWNRLEEPYGS------------IFLSIPTVLDSSLAPE- 523
K ++ P T+ ++V D D ++ E Y S +F++ P+ D +
Sbjct: 397 TKEDLHLPSTN--YYVYHDTDMDQAMERYVSMPREKAAEHIPLLFIAFPSAKDPTWEDRF 454
Query: 524 -GHHILHIFTICSIEDW--------EGLAQKDYDAKKELVADEIINRLENKLFPGLKQSI 574
G + I I S +W +G DY+ K + ++ + KLFP L+ +
Sbjct: 455 PGRSSM-IMLIPSAYEWFEEWQAELKGKRGSDYETYKNSFVEASMS-VAMKLFPQLEGKV 512
>sp|P54979|CRTJ_MYXXA zeta-carotene-forming phytoene desaturase OS=Myxococcus xanthus
GN=carA2 PE=1 SV=1
Length = 517
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 183/419 (43%), Gaps = 54/419 (12%)
Query: 179 KGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEV 238
+G V V EK PGG + DG+T+D+G +++ + + AVG +E
Sbjct: 29 QGFDVQVFEKTQGPGGRCNRLQVDGFTWDLGPTIVL------MPEVFEETFRAVGRRIE- 81
Query: 239 IPDPTTVHFHLPNDLSVRVH-REYSD--FVAELTSKFPHEKEGVLAFYGECWKIFNALNS 295
D T+ L D + RVH R+ SD F +EL + E E V + F A
Sbjct: 82 --DYLTL---LRCDPNYRVHFRDRSDVTFTSELCA-MGRELERVEPGSYARYLAFLAQGR 135
Query: 296 LELKSLEEPIYLFGQFF---KRPLECLTLAYYLPQNA-----GNIARKYIKDPQLLSFID 347
++ ++ + +L G+ + + L LA A +++R + +D +L + +
Sbjct: 136 VQYRTSLD--HLVGRNYAGLRDYLSPRVLARIFQVRAHRRMYADVSR-FFQDERLRAAMT 192
Query: 348 AECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKA 407
+ + ++ +P + + + G I +P GG+ I ++L + ++G Y A
Sbjct: 193 FQTMYLG-VSPYASPAVYGLLPFTELGVG-IWFPKGGLYAIPQALERLAREEGVRFHYGA 250
Query: 408 NVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL--KGEQLPKEEENFQKLY 465
V +++ + G+ GVRL G A ++ NA + KLL K L ++E KL
Sbjct: 251 PVERILTDGGRTRGVRLEGGEVVEADAVLCNADLPYAYEKLLDPKATTLKRKE----KLR 306
Query: 466 VKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN---------RL-EEPYGSIFLSIPTV 515
+ ++ +++G+K P+ H+ V D+ R+ E+P S +++ PT
Sbjct: 307 YTSSGYM-LYLGMKRRY--PELLHHNVVFGRDYKGSFDDIFEFRVPEDP--SFYVNAPTR 361
Query: 516 LDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSI 574
D+SLAPEG L++ + D+ + V + R+ FP L+ I
Sbjct: 362 TDASLAPEGKDALYVLVPVPHQH----PDLDWKVEGPKVRAKFFARMAELGFPSLESDI 416
>sp|Q6GDN7|CRTN_STAAR Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MRSA252) GN=crtN PE=3 SV=1
Length = 502
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 173/391 (44%), Gaps = 40/391 (10%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
VIG+G+ GL AA ++A +G V + EK GG ++DG+TFD+G +++ +
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKKDGFTFDMGPAIVMMPDVYKD 64
Query: 222 LNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLA 281
+ + E+ + V+F D + V + ++ L S P G ++
Sbjct: 65 VFTMCGKNYEDYIELRQLRYIYDVYFD--RDDCITVPTDLAELQHMLESIEPGSTHGFMS 122
Query: 282 FYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLP-------QNAGNIAR 334
F + +K + Y + +++P + + + +A +
Sbjct: 123 FLTDVYKKYEIARR----------YFLERTYRKPSDFYNMTSLVQGAKLKTLNHADQLIE 172
Query: 335 KYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAK 394
YI + ++ + + + I+ + P + + + + + F G+++ GG+ G+A+ LA+
Sbjct: 173 HYIDNEKIQKLLAFQTLYIG-IDPKRGPSLYSIIPMIEMMF-GVHFIKGGMYGMAQGLAQ 230
Query: 395 GLADKGSEILYKANVTKVILEQ--GKAVGVRLS-DGREFYAKTIISNATRWDTFGKLLKG 451
D G I A + ++I++ +A ++++ D R+F I+ A + + + L
Sbjct: 231 LNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKF--DKILCTAD-FPSVAESLMP 287
Query: 452 EQLPKEE---ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-RLEEPY-- 505
+ P ++ L +FL +++G+ +V H+ + DD+ +EE +
Sbjct: 288 DFAPIKKYPPHKIADLDYSCSAFL-MYIGIDIDVT-DQVRLHNVIFADDFRGNIEEIFEG 345
Query: 506 -----GSIFLSIPTVLDSSLAPEGHHILHIF 531
SI++ +P V D SLAP+G +++
Sbjct: 346 RLSHDPSIYVYVPAVADKSLAPQGQTGIYVL 376
>sp|Q6NUM9|RETST_HUMAN All-trans-retinol 13,14-reductase OS=Homo sapiens GN=RETSAT PE=1
SV=2
Length = 610
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 142/319 (44%), Gaps = 41/319 (12%)
Query: 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFG 215
+ D +VIGSG GGL AA LA G RVLVLE++ GG + ++G FD G + G
Sbjct: 66 EKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEFDTGIHYI-G 124
Query: 216 FSDKGNL-NLITQALAAVGCEMEVIPDPTTVH-FHLPNDLSVRVHREYSDFVAE------ 267
++G++ I + + + P + PN +EY + E
Sbjct: 125 RMEEGSIGRFILDQITEGQLDWAPLSSPFDIMVLEGPNG-----RKEYPMYSGEKAYIQG 179
Query: 268 LTSKFPHEKEGVLAFYGECWKIFN--ALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYL 325
L KFP E E ++ Y + K+ + A +++ LK L P+ Q R C L +
Sbjct: 180 LKEKFPQE-EAIIDKYIKLVKVVSSGAPHAILLKFLPLPVV---QLLDR---CGLLTRFS 232
Query: 326 P------QNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINA-SM--VLCDRHFG 376
P Q+ + ++ +L + + +I T TP +A SM +L + +
Sbjct: 233 PFLQASTQSLAEVLQQLGASSELQAVLS---YIFPTYGV--TPNHSAFSMHALLVNHYMK 287
Query: 377 GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREF---YA 432
G YP GG IA + G +L KA V V+L+ GKA GV + G E Y
Sbjct: 288 GGFYPRGGSSEIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHELVNIYC 347
Query: 433 KTIISNATRWDTFGKLLKG 451
++SNA ++T+ LL G
Sbjct: 348 PIVVSNAGLFNTYEHLLPG 366
>sp|P54981|CRTI_STRGR Phytoene dehydrogenase OS=Streptomyces griseus GN=crtI PE=3 SV=1
Length = 507
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 157/422 (37%), Gaps = 67/422 (15%)
Query: 182 RVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM----E 237
RV V+E+ +PGG +G E G+ D G +V+ +L+ A AAVG M E
Sbjct: 33 RVTVVEREDVPGGRAGLLESGGFRIDTGPTVLT------MPDLVEDAFAAVGERMADRLE 86
Query: 238 VIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLE 297
+I + + VH + + A + +F ++ V W L ++
Sbjct: 87 LIRLAPAYRARFADGSQLDVHTDGAAMEAAV-EEFAGARQAVGYRRLRIW--LERLYRVQ 143
Query: 298 LK-----SLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFI 352
++ + + P+ L R L L L G+ ++ D +L +
Sbjct: 144 MRRFIDTNFDSPLQLAHPDLAR-LAALGGFGRLDARIGH----FVSDERLRRVFSFQALY 198
Query: 353 --VSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVT 410
V AL + A M G+ +P GG+ + +++A +D G+ + Y VT
Sbjct: 199 AGVPPARALAAYAVIAYMDTV----AGVYFPRGGMHALPRAMADAASDAGAVLRYGQRVT 254
Query: 411 KVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPS 470
+ + G V ++D ++ ++ L + P + +PS
Sbjct: 255 R-LERSGDRVTAVVTDQEHIPCDAVVLTPDLPVSYRLLGRTPHRPLPLRH-------SPS 306
Query: 471 FLSIHMGVKAEVLPPDTDCHHFVLEDDWNR-----------LEEPYGSIFLSIPTVLDSS 519
+ +H G PD H W + +P S+ ++ PT D S
Sbjct: 307 AVILHTGTDRTW--PDLAHHTISFGAAWKNTFHELTRTGRLMSDP--SLLITRPTATDPS 362
Query: 520 LAPEGHHILHIFTIC-------SIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQ 572
LAP G H+ ++ C + +W L + DE++ LE + PGL
Sbjct: 363 LAPPGKHLHYVLAPCPNTEVGPGVREWRELGPR--------YRDELLAELERREMPGLGA 414
Query: 573 SI 574
+I
Sbjct: 415 AI 416
>sp|Q2YWE5|CRTP_STAAB Diapolycopene oxygenase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtP PE=3 SV=1
Length = 497
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ K E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKKDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK--GEQLPKEEE 459
I V + + Q GVRL G A IISN T+ LL ++L K E
Sbjct: 241 TIHTGTRVDNIKIYQRHVTGVRLDTGEFVKADYIISNMEVIPTYKYLLHLGTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P + H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLEHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q7A3D9|CRTP_STAAN Diapolycopene oxygenase OS=Staphylococcus aureus (strain N315)
GN=crtP PE=1 SV=1
Length = 497
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSV---------MFGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S+ +F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNTHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q99R73|CRTP_STAAM Diapolycopene oxygenase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtP PE=1 SV=1
Length = 497
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSV---------MFGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S+ +F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNTHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q53589|CRTP_STAAE Diapolycopene oxygenase OS=Staphylococcus aureus (strain Newman)
GN=crtP PE=3 SV=2
Length = 497
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q5HCY6|CRTP_STAAC Diapolycopene oxygenase OS=Staphylococcus aureus (strain COL)
GN=crtP PE=3 SV=1
Length = 497
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q2FV57|CRTP_STAA8 Diapolycopene oxygenase OS=Staphylococcus aureus (strain NCTC 8325)
GN=crtP PE=1 SV=1
Length = 497
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q2FDU3|CRTP_STAA3 Diapolycopene oxygenase OS=Staphylococcus aureus (strain USA300)
GN=crtP PE=3 SV=1
Length = 497
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q8NUQ3|CRTP_STAAW Diapolycopene oxygenase OS=Staphylococcus aureus (strain MW2)
GN=crtP PE=3 SV=1
Length = 497
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q6G6B0|CRTP_STAAS Diapolycopene oxygenase OS=Staphylococcus aureus (strain MSSA476)
GN=crtP PE=3 SV=1
Length = 497
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA ++A G V + E+ GG +E DG+ FD+G S++ F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDGFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL--LKGEQLPKEEE 459
I A V + Q + GVRL G A IISN T+ L L ++L K E
Sbjct: 241 TIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIISNMEVIPTYKYLIHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q4L978|CRTP_STAHJ Diapolycopene oxygenase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtP PE=3 SV=1
Length = 502
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 175/439 (39%), Gaps = 67/439 (15%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVM---------FGFSDKGNL 222
AA +LA G V + +K GG E +G+ FD+G S++ F +SDK
Sbjct: 18 AAIRLAQSGFDVSLYDKNNHIGGKVNRLETEGFGFDLGPSILTMPYIFENLFNYSDKQMK 77
Query: 223 NLIT--------QALAAVGCEMEVIPDPTTV---HFHLPNDLSVRVHR--EYSDFVAELT 269
+ +T ++ G +++ D + + + +L ND ++H+ Y++ + T
Sbjct: 78 DYVTIERLPLQWRSFFTNGEVIDLYEDLSQMLNANTYLTNDDIQQLHQFLNYAEKIHRFT 137
Query: 270 SKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNA 329
K G A L L + E I ++ L L Y
Sbjct: 138 EK------GYFA--------------LGLDKVSEIIK-----YQGLLRSLKGVDYFSTMQ 172
Query: 330 GNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIA 389
I R YI+ +L + V + ++ P + ++++ ++ G+ Y GG+ +A
Sbjct: 173 QAINR-YIEKQKLRDMLGYFIKYVGS-SSYDAPAV-LTLLIHMQYEQGLWYVKGGIHKLA 229
Query: 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449
++L + ++G I +V + GVRL DG A I+SN T+ LL
Sbjct: 230 QALEQLAIEEGVAIHTGMDVCSIDTYFNHITGVRLDDGSHVSADYIVSNREVIPTYRDLL 289
Query: 450 KGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNR--LEEPYGS 507
K+ +K+Y A S +H+GV E H+F+ +D R E +
Sbjct: 290 HFSN--KKIAQLEKVYEPAASGYVMHLGVDKEY--AQLAHHNFLFSNDSKRNYREVFHDK 345
Query: 508 IFLSIPTVL-------DSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIIN 560
+ PT+ D + APEGH L + + ++ Y +E V D
Sbjct: 346 VLPQDPTIYLVNSNKSDPTQAPEGHENLKVLPHIPYIQNQPFTEEQYSDFRERVLD---- 401
Query: 561 RLENKLFPGLKQSIAFREV 579
+LE L+Q I + ++
Sbjct: 402 KLEKMGLTDLRQHIIYEDI 420
>sp|Q4L975|CRTN_STAHJ Dehydrosqualene desaturase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtN PE=3 SV=2
Length = 501
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 169/398 (42%), Gaps = 54/398 (13%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
V+G+G+ GL AA +LA KG +V + EK GG +++DG+TFD+G +++
Sbjct: 5 VVGAGVTGLAAAARLAAKGHQVTIFEKNEQVGGRMSQFKKDGFTFDMGPTIV-------- 56
Query: 222 LNLITQALAAVGCE--------MEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFP 273
++ AV E +++ P + + V V + + L + P
Sbjct: 57 --MVPDVYKAVFEESGKRFEDYVDMKPLTHIFDIYFSDKDKVSVSTDLAQLSQTLEATEP 114
Query: 274 HEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLEC---LTLAYYLP---- 326
+G + F + +K + Y + F++P E LTL L
Sbjct: 115 GSTQGFMQFLTDVYKRYEVARK----------YFLERTFRKPSEFYNPLTLYRGLKLKTF 164
Query: 327 QNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVG 386
NA + Y+ + ++ + + + I+ Q P I S++ G++Y GG+
Sbjct: 165 NNANQLIDNYVSNEKIRKLLAFQTLYIG-IDPKQGPSI-YSIIPMIEMVHGVHYIKGGMY 222
Query: 387 GIAKSLAKGLADKGSEILYKANVTKVILEQG--KAVGVRLS-DGREFYAKTIISNATRWD 443
G+A+ L + D G ++ A+V ++I++ +A G+R++ D R F ++ A
Sbjct: 223 GLAQGLLQLGQDHGVKVELNADVQEIIIDPKFKRADGLRVNGDIRRF--DKVLCTADFPY 280
Query: 444 TFGKLLKGEQLPKE--EENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWN-R 500
L+ K E + +FL I+ G+ + L H+ V D+
Sbjct: 281 VAQNLMPVHSPLKNYSPEKVDNMDYSCSAFL-IYAGINRQ-LRDKLHVHNVVFARDFRGN 338
Query: 501 LEEPYG-------SIFLSIPTVLDSSLAPEGHHILHIF 531
+++ + S++L P+V D +LAP+ +++
Sbjct: 339 IDDIFSGKMPDDPSLYLYFPSVEDEALAPKDQTGMYVL 376
>sp|Q02861|CRTI_MYXXA All-trans-zeta-carotene desaturase OS=Myxococcus xanthus GN=carC
PE=1 SV=1
Length = 529
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 160/421 (38%), Gaps = 77/421 (18%)
Query: 152 SRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG--------GSSGYYERDG 203
S G IV+G+G GGL AA LA +G RV V+EK +PG G+SG
Sbjct: 3 SEGGSVRHVIVVGAGPGGLSAAINLAGQGFRVTVVEKDAVPGGRMKGLTLGASGE----- 57
Query: 204 YTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSD 263
Y D G S++ G L I + A + D + LP D++ RVH + D
Sbjct: 58 YAVDTGPSIL---QLPGVLEQIFRRAA------RRLEDYVKL---LPLDVNTRVH--FWD 103
Query: 264 FVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLT--- 320
T++ E LA +G + +AL E+ + +F C +
Sbjct: 104 GTHLDTTRHLDRMEAELAKFGP--RQASALRQWMEDGREKYGIAYQKFI-----CTSADN 156
Query: 321 LAYYLPQNAGNIARKYIKDPQLLSFIDAECFI----VSTINALQTPMINASMVLCDRHFG 376
L YY P R K Q L + + F V+ A + + C F
Sbjct: 157 LGYYAPWRLAPTLR--FKPWQTL-YRQLDGFFHDDRVTYALAYPSKYLGLHPTTCSSVFS 213
Query: 377 ---------GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG 427
G+ + GG +++ + + D G+ V KV ++ G+AVGV+L G
Sbjct: 214 VIPFLELAFGVWHVEGGFRELSRGMMRCARDLGATFRMGTPVEKVRVDAGRAVGVKLVGG 273
Query: 428 REFYAKTIISNATRWDTFGKLLKGEQLPKE---EENFQKLYVKAPSFLSIH-MGVKAEVL 483
A ++ NA L+ E + ++ +F++ + + L
Sbjct: 274 EVLDADAVVVNADLAYAARSLIPAEAREGSRLTDAALERAKYSCSTFMAYYGLDTVYADL 333
Query: 484 PPDTDCHHFV-------------LEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHI 530
P HH + LED LE+P ++ P V D S AP GH L++
Sbjct: 334 P-----HHLIYLSESARRTDRDALEDRHVDLEDP--PFYVCNPGVTDPSGAPAGHSTLYV 386
Query: 531 F 531
Sbjct: 387 L 387
>sp|P48537|CRTI_CERNC Phytoene desaturase OS=Cercospora nicotianae GN=PDH1 PE=3 SV=1
Length = 621
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 377 GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKT 434
GI YPVGG + ++L K +G + + V K++L + G A GV L DGR A
Sbjct: 222 GIWYPVGGFHRVVEALVKIGEREGVDFRMETAVKKILLSEDGGVAKGVELEDGRRLEADV 281
Query: 435 IISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVL 494
+++N+ + KL LP + + L + S SI + P+ + H+ L
Sbjct: 282 VVNNSDLVYAYEKL-----LPIKTPYAESLKGRPGSCSSISFYWALDRQVPELEAHNIFL 336
Query: 495 EDDWNRL-----------EEPYGSIFLSIPTVLDSSLAPEG 524
D++ +EP S ++++P+ +DS+ APEG
Sbjct: 337 ADEYRESFDSIFKKHLIPDEP--SFYVNVPSRVDSTAAPEG 375
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 160 AIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFD 207
AIVIGSG+GG+ A +LA G V VLEK GG +GY FD
Sbjct: 10 AIVIGSGVGGVSTAARLARAGFHVTVLEKNNFTGGRCSLIHHEGYRFD 57
>sp|Q6GDN5|CRTP_STAAR Diapolycopene oxygenase OS=Staphylococcus aureus (strain MRSA252)
GN=crtP PE=3 SV=1
Length = 497
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 173/430 (40%), Gaps = 49/430 (11%)
Query: 172 AATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSV---------MFGFSDKGNL 222
AA ++A G V + E+ GG +E D + FD+G S+ +F +S K
Sbjct: 17 AAIRMAQSGYSVSLYEQNNHIGGKVNRHESDDFGFDLGPSILTMPYIFEKLFEYSKKQMS 76
Query: 223 NLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAF 282
+ +T PD TT+ DL + +E A L+ + E + L +
Sbjct: 77 DYVTIKRLPHQWR-SFFPDGTTI------DLYEGI-KETGQHNAILSKQDIEELQNYLNY 128
Query: 283 YGECWKIF-NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQ 341
+I + L +L + I G PL L Y+ I ++ I +P
Sbjct: 129 TRRIDRITEKGYFNYGLDTLSQIIKFHG-----PLNALINYDYVHTMQQAIDKR-ISNPY 182
Query: 342 LLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGS 401
L + V + ++ P + SM+ + G+ Y GG+ +A +L K ++G
Sbjct: 183 LRQMLGYFIKYVGS-SSYDAPAV-LSMLFHMQQEQGLWYVEGGIHHLANALEKLAREEGV 240
Query: 402 EILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK--GEQLPKEEE 459
I V + + GVRL G A IISN T+ LL ++L K E
Sbjct: 241 TIHTGTRVDNIKTYERCVTGVRLDTGEFVKADYIISNMEVIPTYKYLLHLDTQRLNKLER 300
Query: 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDD--WNRLEEPYGSIFLSIPTVL- 516
F+ A S +H+GV + P H+F ++ N + + + PT+
Sbjct: 301 EFE----PASSGYVMHLGVACQY--PQLAHHNFFFTENAYLNYQQVFHEKVLPDDPTIYL 354
Query: 517 ------DSSLAPEGHHILHIFT-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569
D + AP G+ + + I I+D + +DY AK D+I+++LE
Sbjct: 355 VNTNKTDHTQAPVGYENIKVLPHIPYIQD-QPFTTEDY-AK---FRDKILDKLEKMGLTD 409
Query: 570 LKQSIAFREV 579
L++ I + +V
Sbjct: 410 LRKHIIYEDV 419
>sp|Q8VXV7|LDL1_ARATH Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis
thaliana GN=LDL1 PE=1 SV=1
Length = 844
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 154 GADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDG-----YTFDV 208
G + + +V+G+G+ GLVAA QL G RVLVLE PGG + G DV
Sbjct: 262 GVEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMKGGDGVEAMADV 321
Query: 209 GSSVMFGFSDKGN-LNLITQALAAVGCEMEVIPDPTTVHFHLPN----DLSVRVHREYS- 262
G SV+ G + GN L ++ + L G + + D +LPN D SV E S
Sbjct: 322 GGSVLTGIN--GNPLGVLARQL---GLPLHKVRD--ICPLYLPNGELADASVDSKIEASF 374
Query: 263 ----DFVAELTSKFPHEKEGVLAFYGECWKIF 290
D V +L E + V GE + F
Sbjct: 375 NKLLDRVCKLRQSMIEENKSVDVPLGEALETF 406
>sp|B7MR55|STHA_ECO81 Soluble pyridine nucleotide transhydrogenase OS=Escherichia coli
O81 (strain ED1a) GN=sthA PE=3 SV=1
Length = 466
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYY 199
DYDAIVIGSG GG AA L +GARV V+E+Y GG ++
Sbjct: 6 DYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHW 48
>sp|Q83MI1|STHA_SHIFL Soluble pyridine nucleotide transhydrogenase OS=Shigella flexneri
GN=sthA PE=3 SV=1
Length = 466
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYY 199
DYDAIVIGSG GG AA L +GARV V+E+Y GG ++
Sbjct: 6 DYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHW 48
>sp|B1IVB6|STHA_ECOLC Soluble pyridine nucleotide transhydrogenase OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=sthA PE=3 SV=1
Length = 466
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYY 199
DYDAIVIGSG GG AA L +GARV V+E+Y GG ++
Sbjct: 6 DYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHW 48
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,346,715
Number of Sequences: 539616
Number of extensions: 9453101
Number of successful extensions: 26767
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 26224
Number of HSP's gapped (non-prelim): 602
length of query: 579
length of database: 191,569,459
effective HSP length: 123
effective length of query: 456
effective length of database: 125,196,691
effective search space: 57089691096
effective search space used: 57089691096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)