Query 008069
Match_columns 579
No_of_seqs 428 out of 2405
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 17:23:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008069.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008069hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 2.8E-46 9.6E-51 408.2 35.0 403 158-579 2-418 (501)
2 3ka7_A Oxidoreductase; structu 100.0 1.2E-30 4.3E-35 278.2 37.3 348 158-571 1-361 (425)
3 3nrn_A Uncharacterized protein 100.0 1.5E-29 5E-34 270.0 33.3 340 158-568 1-342 (421)
4 2ivd_A PPO, PPOX, protoporphyr 100.0 8.1E-27 2.8E-31 252.7 29.6 356 155-571 14-405 (478)
5 2bcg_G Secretory pathway GDP d 100.0 3.6E-27 1.2E-31 253.9 23.9 332 155-536 9-372 (453)
6 1s3e_A Amine oxidase [flavin-c 100.0 8.7E-26 3E-30 247.5 33.7 360 156-569 3-374 (520)
7 1d5t_A Guanine nucleotide diss 99.9 4.2E-27 1.4E-31 251.9 21.8 326 155-536 4-361 (433)
8 2yg5_A Putrescine oxidase; oxi 99.9 5.7E-25 2E-29 236.5 32.3 355 157-569 5-372 (453)
9 2vvm_A Monoamine oxidase N; FA 99.9 4.5E-24 1.5E-28 232.3 34.5 353 157-570 39-409 (495)
10 3i6d_A Protoporphyrinogen oxid 99.9 6E-25 2E-29 237.0 26.4 362 157-571 5-399 (470)
11 1sez_A Protoporphyrinogen oxid 99.9 5.3E-25 1.8E-29 240.1 25.9 362 156-569 12-423 (504)
12 2vdc_G Glutamate synthase [NAD 99.9 8.3E-28 2.8E-32 258.4 -2.1 177 42-236 7-189 (456)
13 3nks_A Protoporphyrinogen oxid 99.9 3.2E-24 1.1E-28 232.2 22.1 358 158-567 3-401 (477)
14 4gde_A UDP-galactopyranose mut 99.9 2E-24 6.7E-29 235.8 18.8 279 155-482 8-309 (513)
15 3lov_A Protoporphyrinogen oxid 99.9 8.2E-23 2.8E-27 221.1 27.6 351 157-569 4-394 (475)
16 2jae_A L-amino acid oxidase; o 99.9 3.7E-22 1.3E-26 216.8 26.0 353 156-576 10-409 (489)
17 4dsg_A UDP-galactopyranose mut 99.9 8.1E-22 2.8E-26 213.8 25.7 349 154-571 6-381 (484)
18 2xag_A Lysine-specific histone 99.9 7.4E-22 2.5E-26 225.3 23.6 165 376-569 562-737 (852)
19 3p1w_A Rabgdi protein; GDI RAB 99.9 1.6E-21 5.4E-26 208.7 23.8 331 155-534 18-386 (475)
20 1b37_A Protein (polyamine oxid 99.9 1.5E-20 5.2E-25 203.2 31.7 356 156-571 3-381 (472)
21 2iid_A L-amino-acid oxidase; f 99.9 6.5E-21 2.2E-25 207.4 26.4 356 156-568 32-402 (498)
22 2b9w_A Putative aminooxidase; 99.9 1.3E-19 4.4E-24 193.0 31.2 280 156-481 5-290 (424)
23 1gte_A Dihydropyrimidine dehyd 99.9 5.3E-24 1.8E-28 249.9 -3.1 176 43-236 65-255 (1025)
24 1vg0_A RAB proteins geranylger 99.9 1.1E-19 3.6E-24 199.9 30.0 260 224-533 238-508 (650)
25 1rsg_A FMS1 protein; FAD bindi 99.8 2.1E-20 7.1E-25 204.5 16.7 280 156-486 7-309 (516)
26 2z3y_A Lysine-specific histone 99.8 2.1E-18 7.2E-23 193.8 31.7 111 126-240 74-186 (662)
27 3k7m_X 6-hydroxy-L-nicotine ox 99.8 5.1E-19 1.7E-23 188.7 24.9 285 158-482 2-296 (431)
28 4gut_A Lysine-specific histone 99.8 8.1E-17 2.8E-21 182.7 29.7 350 156-569 335-697 (776)
29 3qj4_A Renalase; FAD/NAD(P)-bi 99.7 1.8E-16 6.3E-21 163.7 23.8 171 378-571 104-278 (342)
30 1v0j_A UDP-galactopyranose mut 99.7 1.7E-17 5.9E-22 175.4 14.7 299 156-533 6-317 (399)
31 1i8t_A UDP-galactopyranose mut 99.7 5.8E-17 2E-21 169.3 10.0 253 158-484 2-262 (367)
32 3ayj_A Pro-enzyme of L-phenyla 99.7 2.7E-16 9.1E-21 175.1 15.8 108 376-486 337-496 (721)
33 1yvv_A Amine oxidase, flavin-c 99.6 5.1E-14 1.7E-18 144.5 27.9 159 379-568 103-262 (336)
34 2bi7_A UDP-galactopyranose mut 99.6 4.3E-16 1.5E-20 163.7 12.4 226 157-446 3-241 (384)
35 3hdq_A UDP-galactopyranose mut 99.6 1.9E-15 6.5E-20 158.5 16.8 293 155-534 27-328 (397)
36 2e1m_A L-glutamate oxidase; L- 99.6 1E-14 3.5E-19 151.8 20.6 81 155-240 42-133 (376)
37 3dje_A Fructosyl amine: oxygen 99.5 1.5E-12 5.2E-17 138.8 19.1 72 377-450 148-226 (438)
38 3dme_A Conserved exported prot 99.4 3.2E-12 1.1E-16 132.4 16.7 68 377-444 138-210 (369)
39 3nyc_A D-arginine dehydrogenas 99.4 1.3E-12 4.5E-17 136.2 12.1 67 376-444 141-210 (381)
40 3ps9_A TRNA 5-methylaminomethy 99.4 1.5E-11 5.2E-16 138.5 20.9 67 376-443 404-473 (676)
41 1y56_B Sarcosine oxidase; dehy 99.4 5.1E-12 1.8E-16 132.0 14.9 66 377-443 137-205 (382)
42 4at0_A 3-ketosteroid-delta4-5a 99.4 6.6E-12 2.3E-16 136.8 16.2 60 384-443 200-264 (510)
43 3v76_A Flavoprotein; structura 99.3 1.1E-11 3.7E-16 131.4 15.3 65 377-443 123-187 (417)
44 1d4d_A Flavocytochrome C fumar 99.3 9.1E-11 3.1E-15 129.5 22.1 58 386-443 255-317 (572)
45 3pvc_A TRNA 5-methylaminomethy 99.3 6.2E-12 2.1E-16 142.0 12.9 67 376-443 399-469 (689)
46 2gag_B Heterotetrameric sarcos 99.3 9E-12 3.1E-16 131.1 13.3 66 377-443 162-230 (405)
47 1qo8_A Flavocytochrome C3 fuma 99.3 3.7E-11 1.3E-15 132.6 18.0 60 385-444 249-313 (566)
48 1y0p_A Fumarate reductase flav 99.3 5.1E-11 1.7E-15 131.6 18.4 58 386-443 255-317 (571)
49 2i0z_A NAD(FAD)-utilizing dehy 99.3 5.1E-11 1.8E-15 127.5 15.2 65 379-443 126-191 (447)
50 2uzz_A N-methyl-L-tryptophan o 99.2 3.4E-11 1.2E-15 125.1 13.1 70 377-450 137-209 (372)
51 3da1_A Glycerol-3-phosphate de 99.2 1E-11 3.4E-16 136.7 8.6 58 386-443 170-232 (561)
52 1pj5_A N,N-dimethylglycine oxi 99.2 8.7E-11 3E-15 135.4 16.4 68 376-444 138-208 (830)
53 2oln_A NIKD protein; flavoprot 99.2 4.1E-10 1.4E-14 118.3 20.0 65 377-443 141-208 (397)
54 3cgv_A Geranylgeranyl reductas 99.2 2.1E-10 7.2E-15 120.1 17.0 64 387-450 103-169 (397)
55 1ryi_A Glycine oxidase; flavop 99.2 1.8E-11 6.3E-16 127.7 8.7 67 376-444 151-220 (382)
56 2gqf_A Hypothetical protein HI 99.2 1.1E-10 3.7E-15 123.2 13.5 62 380-443 103-168 (401)
57 3nlc_A Uncharacterized protein 99.2 3.9E-10 1.3E-14 123.0 17.3 58 386-443 220-277 (549)
58 2gf3_A MSOX, monomeric sarcosi 99.2 5.2E-10 1.8E-14 116.9 17.7 57 386-444 150-206 (389)
59 2bry_A NEDD9 interacting prote 99.2 3.2E-12 1.1E-16 138.8 0.5 105 88-194 10-129 (497)
60 3axb_A Putative oxidoreductase 99.2 4.8E-11 1.6E-15 127.6 9.4 58 386-444 181-255 (448)
61 3kkj_A Amine oxidase, flavin-c 99.1 4.2E-11 1.4E-15 116.9 7.3 58 157-214 2-59 (336)
62 3oz2_A Digeranylgeranylglycero 99.1 3.7E-10 1.3E-14 117.7 14.3 64 387-450 103-169 (397)
63 2rgh_A Alpha-glycerophosphate 99.1 8.7E-10 3E-14 121.5 17.9 59 386-444 188-251 (571)
64 3nix_A Flavoprotein/dehydrogen 99.1 7.6E-10 2.6E-14 117.0 16.8 65 386-450 106-173 (421)
65 3rp8_A Flavoprotein monooxygen 99.1 4.8E-10 1.7E-14 118.2 14.7 61 386-449 127-187 (407)
66 3k30_A Histamine dehydrogenase 99.1 2.5E-11 8.6E-16 137.0 4.9 141 13-197 283-431 (690)
67 1o94_A Tmadh, trimethylamine d 99.1 2.5E-11 8.6E-16 137.7 4.3 149 13-197 280-429 (729)
68 2wdq_A Succinate dehydrogenase 99.1 1.8E-09 6E-14 119.4 18.3 59 386-444 143-207 (588)
69 2x3n_A Probable FAD-dependent 99.1 3.8E-10 1.3E-14 118.6 12.2 66 386-451 107-174 (399)
70 2vou_A 2,6-dihydroxypyridine h 99.1 1.7E-09 5.8E-14 113.7 16.4 61 387-450 100-160 (397)
71 2bs2_A Quinol-fumarate reducta 99.1 2.9E-09 9.8E-14 118.9 17.9 59 386-444 158-221 (660)
72 3i3l_A Alkylhalidase CMLS; fla 99.0 1.3E-09 4.5E-14 120.3 14.7 65 386-450 128-195 (591)
73 1ps9_A 2,4-dienoyl-COA reducta 99.0 1.1E-10 3.7E-15 131.4 6.0 143 14-197 270-413 (671)
74 3ihg_A RDME; flavoenzyme, anth 99.0 9.2E-10 3.1E-14 120.5 13.2 64 386-450 120-190 (535)
75 3atr_A Conserved archaeal prot 99.0 1.2E-09 4.1E-14 117.0 13.8 65 387-451 101-170 (453)
76 2gjc_A Thiazole biosynthetic e 99.0 2.7E-09 9.2E-14 108.3 15.4 70 127-196 16-106 (326)
77 2qa1_A PGAE, polyketide oxygen 99.0 2.7E-09 9.3E-14 115.7 16.4 63 387-450 107-172 (500)
78 1rp0_A ARA6, thiazole biosynth 99.0 2.4E-09 8.4E-14 107.3 14.2 56 387-442 120-190 (284)
79 2h88_A Succinate dehydrogenase 99.0 6.4E-09 2.2E-13 115.3 18.1 59 386-444 155-218 (621)
80 2qa2_A CABE, polyketide oxygen 99.0 3.2E-09 1.1E-13 115.1 15.1 63 387-450 108-173 (499)
81 3e1t_A Halogenase; flavoprotei 99.0 2.9E-09 1E-13 115.9 14.3 64 386-449 111-178 (512)
82 3alj_A 2-methyl-3-hydroxypyrid 99.0 4.3E-09 1.5E-13 109.8 14.9 62 386-451 107-168 (379)
83 2qcu_A Aerobic glycerol-3-phos 99.0 3.5E-09 1.2E-13 114.9 14.3 59 385-444 148-211 (501)
84 2gmh_A Electron transfer flavo 99.0 5.7E-09 1.9E-13 115.3 15.4 61 386-446 144-220 (584)
85 4a9w_A Monooxygenase; baeyer-v 98.9 6.2E-09 2.1E-13 106.8 13.9 56 387-443 77-132 (357)
86 1chu_A Protein (L-aspartate ox 98.9 3.9E-09 1.3E-13 115.5 12.9 59 386-444 138-209 (540)
87 1kf6_A Fumarate reductase flav 98.9 1.6E-08 5.6E-13 111.9 18.0 60 386-445 134-199 (602)
88 3c4n_A Uncharacterized protein 98.9 2E-09 6.7E-14 113.6 9.5 56 386-443 172-236 (405)
89 1k0i_A P-hydroxybenzoate hydro 98.9 5.1E-09 1.7E-13 109.7 12.5 63 387-450 104-170 (394)
90 3fmw_A Oxygenase; mithramycin, 98.9 2.2E-09 7.6E-14 118.2 9.7 64 386-450 148-214 (570)
91 3jsk_A Cypbp37 protein; octame 98.9 1E-08 3.5E-13 104.7 13.7 41 156-196 78-120 (344)
92 2xdo_A TETX2 protein; tetracyc 98.9 5.7E-09 1.9E-13 109.7 12.2 61 387-450 129-189 (398)
93 1jnr_A Adenylylsulfate reducta 98.9 3.9E-08 1.3E-12 109.8 18.7 57 387-443 152-218 (643)
94 4ap3_A Steroid monooxygenase; 98.9 1E-08 3.5E-13 112.4 13.6 52 156-207 20-71 (549)
95 3c96_A Flavin-containing monoo 98.9 8.6E-09 2.9E-13 108.8 12.6 62 387-450 108-176 (410)
96 3o0h_A Glutathione reductase; 98.9 4.2E-08 1.4E-12 105.9 18.1 57 386-443 232-288 (484)
97 2e5v_A L-aspartate oxidase; ar 98.9 5E-08 1.7E-12 105.0 18.3 59 386-445 119-178 (472)
98 3gwf_A Cyclohexanone monooxyge 98.9 7E-09 2.4E-13 113.4 11.6 57 387-443 88-147 (540)
99 3itj_A Thioredoxin reductase 1 98.9 6.5E-09 2.2E-13 106.0 10.7 54 390-443 212-271 (338)
100 3lxd_A FAD-dependent pyridine 98.9 5.5E-08 1.9E-12 102.8 18.1 59 385-443 193-251 (415)
101 4hb9_A Similarities with proba 98.9 1.5E-08 5.2E-13 106.2 13.3 51 400-450 123-173 (412)
102 2zxi_A TRNA uridine 5-carboxym 98.8 1.2E-08 4E-13 112.0 12.2 58 386-444 123-181 (637)
103 2zbw_A Thioredoxin reductase; 98.8 1.3E-08 4.3E-13 104.0 11.5 53 389-442 68-120 (335)
104 2cul_A Glucose-inhibited divis 98.8 3.4E-08 1.2E-12 95.8 13.4 57 387-444 69-126 (232)
105 3f8d_A Thioredoxin reductase ( 98.8 1.5E-08 5.3E-13 102.4 11.2 53 389-443 73-125 (323)
106 3fg2_P Putative rubredoxin red 98.8 2.8E-08 9.7E-13 104.6 13.3 59 385-443 183-241 (404)
107 3lzw_A Ferredoxin--NADP reduct 98.8 6E-09 2.1E-13 106.0 7.7 54 387-441 68-121 (332)
108 3ces_A MNMG, tRNA uridine 5-ca 98.8 1.3E-08 4.3E-13 112.2 10.5 58 386-444 124-182 (651)
109 3ab1_A Ferredoxin--NADP reduct 98.8 1.6E-08 5.6E-13 104.5 10.7 55 388-442 76-130 (360)
110 1w4x_A Phenylacetone monooxyge 98.8 3.7E-08 1.3E-12 107.9 13.6 42 156-197 15-56 (542)
111 2aqj_A Tryptophan halogenase, 98.8 5.7E-08 2E-12 106.3 14.9 59 386-445 165-224 (538)
112 4fk1_A Putative thioredoxin re 98.8 3.1E-08 1.1E-12 100.0 11.8 38 156-194 5-42 (304)
113 4dna_A Probable glutathione re 98.8 5.8E-08 2E-12 104.2 14.5 57 386-443 211-268 (463)
114 3cp8_A TRNA uridine 5-carboxym 98.7 3.7E-08 1.3E-12 108.4 12.2 56 387-443 118-174 (641)
115 3uox_A Otemo; baeyer-villiger 98.7 4.3E-08 1.5E-12 107.3 12.6 42 156-197 8-49 (545)
116 3r9u_A Thioredoxin reductase; 98.7 2.5E-08 8.4E-13 100.6 9.8 51 393-443 190-244 (315)
117 1trb_A Thioredoxin reductase; 98.7 2.8E-08 9.5E-13 100.7 9.7 58 386-443 184-247 (320)
118 1y56_A Hypothetical protein PH 98.7 6.7E-08 2.3E-12 104.5 13.2 49 394-443 265-313 (493)
119 3gyx_A Adenylylsulfate reducta 98.7 2E-07 6.9E-12 104.0 17.2 57 387-443 167-233 (662)
120 2gv8_A Monooxygenase; FMO, FAD 98.7 9.5E-08 3.2E-12 102.0 13.5 42 156-197 5-48 (447)
121 2r0c_A REBC; flavin adenine di 98.7 7.7E-08 2.6E-12 105.5 12.6 60 387-450 139-203 (549)
122 2weu_A Tryptophan 5-halogenase 98.7 6.4E-08 2.2E-12 105.1 11.2 59 386-445 173-232 (511)
123 3fpz_A Thiazole biosynthetic e 98.7 1.2E-08 4E-13 104.3 4.7 66 125-197 40-107 (326)
124 2ywl_A Thioredoxin reductase r 98.7 2.3E-07 7.9E-12 85.8 13.0 54 387-443 57-110 (180)
125 2pyx_A Tryptophan halogenase; 98.6 1.3E-07 4.5E-12 103.1 13.1 64 386-450 175-241 (526)
126 2e4g_A Tryptophan halogenase; 98.6 1.5E-07 5E-12 103.3 13.3 64 386-450 194-260 (550)
127 3d1c_A Flavin-containing putat 98.6 8.7E-08 3E-12 99.1 10.3 55 387-443 89-143 (369)
128 1xdi_A RV3303C-LPDA; reductase 98.6 3.3E-07 1.1E-11 99.3 15.2 58 386-444 223-280 (499)
129 3iwa_A FAD-dependent pyridine 98.6 1.9E-07 6.4E-12 100.4 13.0 58 385-443 201-258 (472)
130 2r9z_A Glutathione amide reduc 98.6 5.8E-07 2E-11 96.4 16.0 57 386-443 207-264 (463)
131 2q0l_A TRXR, thioredoxin reduc 98.6 4.4E-07 1.5E-11 91.4 14.2 51 391-443 64-114 (311)
132 2dkh_A 3-hydroxybenzoate hydro 98.6 1.1E-07 3.9E-12 106.1 10.7 65 386-451 141-219 (639)
133 1ges_A Glutathione reductase; 98.6 2.4E-07 8.3E-12 98.9 12.8 58 386-443 208-265 (450)
134 2q7v_A Thioredoxin reductase; 98.6 3.5E-07 1.2E-11 92.9 13.1 40 156-196 7-46 (325)
135 3fbs_A Oxidoreductase; structu 98.6 4.1E-07 1.4E-11 90.7 13.2 34 157-190 2-35 (297)
136 3cty_A Thioredoxin reductase; 98.6 5.3E-07 1.8E-11 91.3 14.1 40 156-196 15-54 (319)
137 2wpf_A Trypanothione reductase 98.6 7E-07 2.4E-11 96.6 15.4 59 386-444 235-293 (495)
138 3oc4_A Oxidoreductase, pyridin 98.6 6.2E-08 2.1E-12 103.6 7.0 56 386-443 189-244 (452)
139 1vdc_A NTR, NADPH dependent th 98.5 2.1E-07 7.2E-12 94.8 8.8 53 388-443 72-124 (333)
140 1q1r_A Putidaredoxin reductase 98.5 5.1E-07 1.7E-11 95.9 11.9 57 386-442 191-249 (431)
141 2xve_A Flavin-containing monoo 98.5 9.6E-07 3.3E-11 94.7 14.1 40 158-197 3-48 (464)
142 1dxl_A Dihydrolipoamide dehydr 98.5 1.4E-06 4.8E-11 93.5 15.4 42 156-197 5-46 (470)
143 3ef6_A Toluene 1,2-dioxygenase 98.5 9.1E-08 3.1E-12 101.0 5.5 57 386-443 185-241 (410)
144 2cdu_A NADPH oxidase; flavoenz 98.5 3.2E-07 1.1E-11 98.1 9.7 58 386-444 191-248 (452)
145 4b1b_A TRXR, thioredoxin reduc 98.5 3.6E-07 1.2E-11 99.6 10.0 58 386-444 263-320 (542)
146 3s5w_A L-ornithine 5-monooxyge 98.5 1.3E-06 4.6E-11 93.3 14.3 38 156-193 29-71 (463)
147 3qvp_A Glucose oxidase; oxidor 98.4 1.5E-06 5.3E-11 95.3 14.6 61 396-456 237-306 (583)
148 1fl2_A Alkyl hydroperoxide red 98.4 5.9E-07 2E-11 90.4 10.4 52 392-443 62-115 (310)
149 2a87_A TRXR, TR, thioredoxin r 98.4 9.2E-07 3.1E-11 90.3 11.7 40 155-195 12-51 (335)
150 3ics_A Coenzyme A-disulfide re 98.4 5.9E-07 2E-11 99.3 10.8 55 386-443 228-282 (588)
151 3h8l_A NADH oxidase; membrane 98.4 8.5E-07 2.9E-11 93.3 11.0 52 386-442 218-269 (409)
152 4gcm_A TRXR, thioredoxin reduc 98.4 1.9E-07 6.5E-12 94.3 5.7 41 156-197 5-45 (312)
153 1hyu_A AHPF, alkyl hydroperoxi 98.4 1.8E-06 6.3E-11 93.9 13.3 54 390-443 271-326 (521)
154 1n4w_A CHOD, cholesterol oxida 98.3 3.4E-06 1.2E-10 91.3 14.1 61 389-449 224-294 (504)
155 1ebd_A E3BD, dihydrolipoamide 98.3 3.7E-06 1.3E-10 89.8 14.2 39 157-196 3-41 (455)
156 1pn0_A Phenol 2-monooxygenase; 98.3 1.7E-06 5.9E-11 96.8 11.2 36 157-192 8-48 (665)
157 4g6h_A Rotenone-insensitive NA 98.3 6.1E-06 2.1E-10 89.2 14.8 55 386-441 272-330 (502)
158 3q9t_A Choline dehydrogenase a 98.3 3.5E-06 1.2E-10 92.5 12.5 54 398-451 218-278 (577)
159 3ntd_A FAD-dependent pyridine 98.3 3.7E-06 1.3E-10 92.3 12.2 57 386-443 192-267 (565)
160 1coy_A Cholesterol oxidase; ox 98.3 7.7E-06 2.6E-10 88.6 14.3 60 389-448 229-298 (507)
161 4a5l_A Thioredoxin reductase; 98.2 6E-07 2.1E-11 90.5 4.6 36 156-191 3-38 (314)
162 3fim_B ARYL-alcohol oxidase; A 98.2 6.1E-06 2.1E-10 90.4 12.0 63 395-457 217-290 (566)
163 3t37_A Probable dehydrogenase; 98.2 1.6E-06 5.6E-11 94.3 7.0 53 399-451 224-279 (526)
164 3klj_A NAD(FAD)-dependent dehy 98.2 3.2E-06 1.1E-10 88.3 8.8 44 396-442 72-115 (385)
165 1c0p_A D-amino acid oxidase; a 98.1 2E-06 6.8E-11 88.8 6.3 40 155-194 4-43 (363)
166 3urh_A Dihydrolipoyl dehydroge 98.1 1.8E-06 6E-11 93.3 4.8 58 385-443 238-300 (491)
167 4eqs_A Coenzyme A disulfide re 98.1 1.9E-05 6.6E-10 83.8 12.3 53 386-443 188-240 (437)
168 2jbv_A Choline oxidase; alcoho 98.0 1.6E-05 5.5E-10 86.9 11.5 48 398-445 221-275 (546)
169 3l8k_A Dihydrolipoyl dehydroge 98.0 1.9E-06 6.6E-11 92.4 3.9 41 157-197 4-44 (466)
170 2v3a_A Rubredoxin reductase; a 98.0 4.9E-05 1.7E-09 79.1 14.3 51 392-443 193-243 (384)
171 2x8g_A Thioredoxin glutathione 98.0 5E-07 1.7E-11 100.1 -1.0 109 62-188 22-138 (598)
172 1mo9_A ORF3; nucleotide bindin 98.0 5.2E-06 1.8E-10 90.3 6.2 58 386-443 255-316 (523)
173 3lad_A Dihydrolipoamide dehydr 98.0 5.6E-06 1.9E-10 88.9 5.9 59 385-444 220-281 (476)
174 2yqu_A 2-oxoglutarate dehydrog 98.0 6.7E-05 2.3E-09 80.0 14.1 50 394-444 216-265 (455)
175 2qae_A Lipoamide, dihydrolipoy 98.0 4.6E-06 1.6E-10 89.4 4.9 57 386-443 215-276 (468)
176 3qfa_A Thioredoxin reductase 1 97.9 6.4E-06 2.2E-10 89.5 5.7 58 386-443 250-315 (519)
177 3g3e_A D-amino-acid oxidase; F 97.9 4.6E-06 1.6E-10 85.6 3.8 50 386-450 142-191 (351)
178 3ic9_A Dihydrolipoamide dehydr 97.9 4.3E-06 1.5E-10 90.3 3.3 56 386-443 215-274 (492)
179 1ojt_A Surface protein; redox- 97.9 5.5E-06 1.9E-10 89.1 4.0 58 386-444 226-287 (482)
180 1zk7_A HGII, reductase, mercur 97.9 8E-06 2.7E-10 87.5 5.2 57 386-444 216-272 (467)
181 2yqu_A 2-oxoglutarate dehydrog 97.9 7.2E-06 2.5E-10 87.5 4.7 40 158-197 2-41 (455)
182 1zmd_A Dihydrolipoyl dehydroge 97.9 6.3E-06 2.2E-10 88.5 4.3 57 386-443 220-282 (474)
183 1v59_A Dihydrolipoamide dehydr 97.9 4.7E-06 1.6E-10 89.5 3.3 58 386-444 224-288 (478)
184 3dgz_A Thioredoxin reductase 2 97.9 7.5E-06 2.6E-10 88.2 4.9 58 386-443 225-287 (488)
185 3dk9_A Grase, GR, glutathione 97.9 6E-06 2E-10 88.8 3.8 58 386-443 228-293 (478)
186 3ihm_A Styrene monooxygenase A 97.9 7.2E-06 2.5E-10 86.9 4.3 35 156-190 21-55 (430)
187 2hqm_A GR, grase, glutathione 97.8 8.5E-06 2.9E-10 87.6 4.4 58 386-443 226-285 (479)
188 2eq6_A Pyruvate dehydrogenase 97.8 0.00016 5.6E-09 77.2 14.0 50 393-443 217-271 (464)
189 1fec_A Trypanothione reductase 97.8 1.2E-05 4.3E-10 86.6 5.2 59 386-444 231-289 (490)
190 1nhp_A NADH peroxidase; oxidor 97.8 0.00011 3.6E-09 78.2 12.0 49 393-443 198-246 (447)
191 2gqw_A Ferredoxin reductase; f 97.8 0.0002 6.8E-09 75.2 13.9 45 393-442 194-238 (408)
192 3c4a_A Probable tryptophan hyd 97.8 1.6E-05 5.5E-10 82.7 5.4 51 386-449 98-148 (381)
193 3dgh_A TRXR-1, thioredoxin red 97.8 1.5E-05 5.2E-10 85.7 5.2 58 386-443 227-289 (483)
194 1lvl_A Dihydrolipoamide dehydr 97.8 1.3E-05 4.4E-10 85.7 4.1 55 386-443 212-268 (458)
195 2eq6_A Pyruvate dehydrogenase 97.7 1.4E-05 4.7E-10 85.6 4.0 39 157-196 6-44 (464)
196 1onf_A GR, grase, glutathione 97.7 1.7E-05 5.9E-10 85.7 4.8 59 386-444 217-276 (500)
197 1fec_A Trypanothione reductase 97.7 0.00021 7.1E-09 77.0 13.2 36 157-192 187-225 (490)
198 2hqm_A GR, grase, glutathione 97.7 0.00021 7E-09 76.7 13.0 36 157-192 185-220 (479)
199 3pl8_A Pyranose 2-oxidase; sub 97.7 2.2E-05 7.4E-10 87.2 5.3 41 156-196 45-85 (623)
200 4b63_A L-ornithine N5 monooxyg 97.7 5.7E-05 2E-09 81.6 8.3 41 156-196 38-78 (501)
201 1ebd_A E3BD, dihydrolipoamide 97.7 0.00026 8.9E-09 75.3 13.0 50 394-444 219-271 (455)
202 2a8x_A Dihydrolipoyl dehydroge 97.7 2.1E-05 7.1E-10 84.1 4.3 57 386-443 212-271 (464)
203 1onf_A GR, grase, glutathione 97.7 0.00026 8.9E-09 76.4 13.0 36 157-192 176-211 (500)
204 2bc0_A NADH oxidase; flavoprot 97.6 0.00025 8.7E-09 76.2 12.3 49 393-443 243-291 (490)
205 1v59_A Dihydrolipoamide dehydr 97.6 0.00027 9.1E-09 75.7 12.4 37 157-193 183-219 (478)
206 1ojt_A Surface protein; redox- 97.6 0.00029 1E-08 75.5 12.0 36 157-192 185-220 (482)
207 1mo9_A ORF3; nucleotide bindin 97.6 0.00037 1.3E-08 75.6 12.9 35 158-192 215-249 (523)
208 3g5s_A Methylenetetrahydrofola 97.5 6.1E-05 2.1E-09 77.5 5.4 37 158-194 2-38 (443)
209 1m6i_A Programmed cell death p 97.5 0.00066 2.3E-08 73.0 13.7 50 393-443 233-282 (493)
210 1lqt_A FPRA; NADP+ derivative, 97.5 4.8E-05 1.7E-09 81.1 4.5 41 157-197 3-50 (456)
211 2gag_A Heterotetrameric sarcos 97.5 5.4E-05 1.8E-09 88.3 5.2 41 157-197 128-168 (965)
212 1zmd_A Dihydrolipoyl dehydroge 97.5 0.00052 1.8E-08 73.4 12.5 36 157-192 178-213 (474)
213 2a8x_A Dihydrolipoyl dehydroge 97.5 0.00063 2.2E-08 72.5 13.0 36 157-192 171-206 (464)
214 2qae_A Lipoamide, dihydrolipoy 97.5 0.00078 2.7E-08 71.9 13.0 36 157-192 174-209 (468)
215 3cgb_A Pyridine nucleotide-dis 97.5 0.00071 2.4E-08 72.5 12.7 49 393-443 234-282 (480)
216 1lvl_A Dihydrolipoamide dehydr 97.5 0.00056 1.9E-08 72.9 11.8 36 157-192 171-206 (458)
217 1cjc_A Protein (adrenodoxin re 97.5 7.9E-05 2.7E-09 79.6 5.1 42 156-197 5-48 (460)
218 1zk7_A HGII, reductase, mercur 97.4 0.00099 3.4E-08 71.1 13.2 36 157-192 176-211 (467)
219 3kd9_A Coenzyme A disulfide re 97.4 0.0001 3.5E-09 78.4 5.3 54 386-442 190-243 (449)
220 3h28_A Sulfide-quinone reducta 97.4 8.5E-05 2.9E-09 78.5 4.2 37 158-194 3-41 (430)
221 3lad_A Dihydrolipoamide dehydr 97.4 0.0014 4.9E-08 69.9 13.7 36 157-192 180-215 (476)
222 3urh_A Dihydrolipoyl dehydroge 97.4 0.0014 4.8E-08 70.4 13.5 36 157-192 198-233 (491)
223 1dxl_A Dihydrolipoamide dehydr 97.4 0.00064 2.2E-08 72.5 10.7 35 157-191 177-211 (470)
224 2gqw_A Ferredoxin reductase; f 97.3 0.00015 5.3E-09 76.0 5.6 38 156-193 6-45 (408)
225 1kdg_A CDH, cellobiose dehydro 97.3 0.00014 4.6E-09 79.5 5.3 61 389-449 198-267 (546)
226 1xhc_A NADH oxidase /nitrite r 97.3 0.00055 1.9E-08 70.7 9.1 34 158-191 144-177 (367)
227 1nhp_A NADH peroxidase; oxidor 97.3 0.00016 5.6E-09 76.7 5.1 36 158-193 1-38 (447)
228 3ic9_A Dihydrolipoamide dehydr 97.3 0.0017 5.7E-08 69.9 13.0 36 157-192 174-209 (492)
229 2bc0_A NADH oxidase; flavoprot 97.3 0.00018 6.1E-09 77.5 5.2 37 157-193 35-74 (490)
230 1m6i_A Programmed cell death p 97.3 0.0002 6.7E-09 77.2 5.3 39 155-193 9-49 (493)
231 3dgh_A TRXR-1, thioredoxin red 97.2 0.0015 5E-08 70.1 12.0 33 157-189 187-219 (483)
232 2v3a_A Rubredoxin reductase; a 97.2 0.00019 6.4E-09 74.6 4.7 34 157-190 4-39 (384)
233 3cgb_A Pyridine nucleotide-dis 97.2 0.00023 7.7E-09 76.4 5.1 38 157-194 36-75 (480)
234 3sx6_A Sulfide-quinone reducta 97.2 0.00024 8.2E-09 75.2 5.0 35 157-191 4-41 (437)
235 1ju2_A HydroxynitrIle lyase; f 97.2 0.00013 4.3E-09 79.6 2.7 58 392-449 200-267 (536)
236 3uox_A Otemo; baeyer-villiger 97.2 0.0013 4.6E-08 71.5 10.8 36 156-191 184-219 (545)
237 3ab1_A Ferredoxin--NADP reduct 97.2 0.0019 6.6E-08 66.0 11.3 47 396-442 212-262 (360)
238 3dk9_A Grase, GR, glutathione 97.2 0.0029 9.8E-08 67.7 13.1 36 157-192 187-222 (478)
239 1xhc_A NADH oxidase /nitrite r 97.1 0.00025 8.7E-09 73.3 4.2 52 386-443 183-234 (367)
240 3gwf_A Cyclohexanone monooxyge 97.1 0.0029 1E-07 68.8 12.7 36 156-191 177-212 (540)
241 2zbw_A Thioredoxin reductase; 97.1 0.003 1E-07 63.7 11.7 48 395-443 200-252 (335)
242 3dgz_A Thioredoxin reductase 2 97.1 0.0033 1.1E-07 67.4 12.5 34 157-190 185-218 (488)
243 3s5w_A L-ornithine 5-monooxyge 97.0 0.0073 2.5E-07 64.0 14.6 35 157-191 227-263 (463)
244 3vrd_B FCCB subunit, flavocyto 97.0 0.00048 1.6E-08 71.8 4.9 51 390-441 206-256 (401)
245 2q0l_A TRXR, thioredoxin reduc 97.0 0.007 2.4E-07 60.2 13.2 45 399-443 192-241 (311)
246 3d1c_A Flavin-containing putat 97.0 0.0044 1.5E-07 63.3 11.8 50 393-443 221-272 (369)
247 4ap3_A Steroid monooxygenase; 96.9 0.0019 6.4E-08 70.5 8.8 36 156-191 190-225 (549)
248 3hyw_A Sulfide-quinone reducta 96.9 0.00067 2.3E-08 71.6 4.8 54 386-442 200-255 (430)
249 3kd9_A Coenzyme A disulfide re 96.8 0.0046 1.6E-07 65.5 10.7 36 157-192 148-183 (449)
250 1fl2_A Alkyl hydroperoxide red 96.8 0.0065 2.2E-07 60.4 11.3 44 399-442 193-241 (310)
251 2x8g_A Thioredoxin glutathione 96.7 0.013 4.6E-07 64.3 13.9 32 158-189 287-318 (598)
252 3k30_A Histamine dehydrogenase 96.7 0.0022 7.5E-08 72.0 7.5 35 157-191 523-559 (690)
253 1gpe_A Protein (glucose oxidas 96.6 0.0014 4.9E-08 72.0 5.2 54 396-449 241-303 (587)
254 3l8k_A Dihydrolipoyl dehydroge 96.5 0.017 5.8E-07 61.4 12.7 35 157-191 172-206 (466)
255 3qfa_A Thioredoxin reductase 1 96.5 0.027 9.2E-07 60.8 14.2 32 158-189 211-242 (519)
256 1hyu_A AHPF, alkyl hydroperoxi 96.2 0.015 5.1E-07 62.8 10.4 44 399-442 404-452 (521)
257 2g1u_A Hypothetical protein TM 95.7 0.011 3.6E-07 52.8 5.3 35 156-190 18-52 (155)
258 2gag_A Heterotetrameric sarcos 95.7 0.025 8.5E-07 65.8 9.5 47 396-442 326-382 (965)
259 3fwz_A Inner membrane protein 95.7 0.015 5.2E-07 50.8 6.0 35 156-190 6-40 (140)
260 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.13 4.3E-06 48.8 12.1 127 156-284 30-177 (223)
261 3klj_A NAD(FAD)-dependent dehy 95.5 0.014 4.6E-07 60.6 5.8 38 157-194 146-183 (385)
262 1gte_A Dihydropyrimidine dehyd 95.4 0.077 2.6E-06 62.1 12.6 33 158-190 333-366 (1025)
263 1lss_A TRK system potassium up 95.4 0.014 4.9E-07 50.3 4.9 34 157-190 4-37 (140)
264 3llv_A Exopolyphosphatase-rela 95.3 0.017 5.9E-07 50.3 5.1 33 158-190 7-39 (141)
265 3ic5_A Putative saccharopine d 95.0 0.024 8.2E-07 47.3 4.7 34 157-190 5-39 (118)
266 1ges_A Glutathione reductase; 94.9 0.027 9.2E-07 59.6 6.1 60 157-237 167-226 (450)
267 4eqs_A Coenzyme A disulfide re 94.8 0.052 1.8E-06 57.1 7.9 60 157-237 147-206 (437)
268 4gcm_A TRXR, thioredoxin reduc 94.8 0.021 7.2E-07 56.8 4.6 36 157-192 145-180 (312)
269 1id1_A Putative potassium chan 94.6 0.04 1.4E-06 48.8 5.5 34 157-190 3-36 (153)
270 3ado_A Lambda-crystallin; L-gu 94.5 0.024 8.4E-07 56.9 4.3 34 157-190 6-39 (319)
271 2r9z_A Glutathione amide reduc 94.4 0.044 1.5E-06 58.1 6.2 36 157-192 166-201 (463)
272 2e1m_B L-glutamate oxidase; L- 94.4 0.054 1.9E-06 46.7 5.5 56 428-485 4-59 (130)
273 2x5o_A UDP-N-acetylmuramoylala 94.3 0.024 8.3E-07 59.8 3.9 38 157-194 5-42 (439)
274 3lk7_A UDP-N-acetylmuramoylala 94.2 0.044 1.5E-06 58.0 5.7 35 156-190 8-42 (451)
275 1kdg_A CDH, cellobiose dehydro 94.2 0.088 3E-06 57.1 8.2 37 156-192 6-42 (546)
276 2hmt_A YUAA protein; RCK, KTN, 94.1 0.048 1.6E-06 47.2 4.7 33 158-190 7-39 (144)
277 1f0y_A HCDH, L-3-hydroxyacyl-C 94.0 0.05 1.7E-06 54.2 5.3 33 158-190 16-48 (302)
278 4a5l_A Thioredoxin reductase; 93.9 0.04 1.4E-06 54.6 4.5 34 157-190 152-185 (314)
279 3c85_A Putative glutathione-re 93.9 0.054 1.8E-06 49.4 5.0 34 157-190 39-73 (183)
280 1pzg_A LDH, lactate dehydrogen 93.8 0.063 2.1E-06 54.3 5.6 35 156-190 8-43 (331)
281 2cdu_A NADPH oxidase; flavoenz 93.4 0.088 3E-06 55.5 6.3 61 157-237 149-209 (452)
282 2dpo_A L-gulonate 3-dehydrogen 93.4 0.055 1.9E-06 54.4 4.3 33 158-190 7-39 (319)
283 4e12_A Diketoreductase; oxidor 93.3 0.077 2.6E-06 52.3 5.3 33 158-190 5-37 (283)
284 3ntd_A FAD-dependent pyridine 93.3 0.1 3.5E-06 56.6 6.7 60 157-237 151-210 (565)
285 3l4b_C TRKA K+ channel protien 93.3 0.061 2.1E-06 50.7 4.3 33 158-190 1-33 (218)
286 3i83_A 2-dehydropantoate 2-red 93.3 0.069 2.4E-06 53.6 4.9 33 158-190 3-35 (320)
287 3lxd_A FAD-dependent pyridine 93.1 0.12 4.2E-06 53.7 6.8 61 157-237 152-212 (415)
288 3cty_A Thioredoxin reductase; 93.1 0.14 5E-06 50.7 7.0 53 391-443 195-252 (319)
289 2wpf_A Trypanothione reductase 93.1 0.11 3.6E-06 55.7 6.3 60 157-237 191-253 (495)
290 3hn2_A 2-dehydropantoate 2-red 93.0 0.074 2.5E-06 53.2 4.7 33 158-190 3-35 (312)
291 2ewd_A Lactate dehydrogenase,; 92.9 0.095 3.3E-06 52.6 5.2 34 157-190 4-38 (317)
292 1kyq_A Met8P, siroheme biosynt 92.8 0.11 3.9E-06 50.8 5.5 35 156-190 12-46 (274)
293 1pjq_A CYSG, siroheme synthase 92.8 0.9 3.1E-05 47.9 12.9 128 157-285 12-160 (457)
294 1ks9_A KPA reductase;, 2-dehyd 92.8 0.091 3.1E-06 51.5 4.9 33 159-191 2-34 (291)
295 2raf_A Putative dinucleotide-b 92.8 0.1 3.5E-06 48.9 5.0 35 157-191 19-53 (209)
296 3fg2_P Putative rubredoxin red 92.8 0.13 4.4E-06 53.3 6.2 61 157-237 142-202 (404)
297 1q1r_A Putidaredoxin reductase 92.6 0.12 4.1E-06 54.2 5.8 37 157-193 149-185 (431)
298 2y0c_A BCEC, UDP-glucose dehyd 92.6 0.093 3.2E-06 55.9 5.0 34 157-190 8-41 (478)
299 3k96_A Glycerol-3-phosphate de 92.5 0.1 3.5E-06 53.3 4.9 34 157-190 29-62 (356)
300 3ics_A Coenzyme A-disulfide re 92.5 0.15 5E-06 55.8 6.5 60 157-237 187-246 (588)
301 3k6j_A Protein F01G10.3, confi 92.5 0.17 5.8E-06 53.3 6.6 35 157-191 54-88 (460)
302 3ef6_A Toluene 1,2-dioxygenase 92.5 0.12 4.1E-06 53.7 5.5 61 157-237 143-203 (410)
303 1xdi_A RV3303C-LPDA; reductase 92.4 0.14 4.9E-06 54.7 6.2 60 157-237 182-241 (499)
304 3g17_A Similar to 2-dehydropan 92.4 0.097 3.3E-06 51.8 4.5 33 158-190 3-35 (294)
305 4b1b_A TRXR, thioredoxin reduc 92.4 0.19 6.5E-06 54.3 7.1 59 157-237 223-281 (542)
306 2ew2_A 2-dehydropantoate 2-red 92.3 0.11 3.6E-06 51.7 4.7 33 158-190 4-36 (316)
307 3eag_A UDP-N-acetylmuramate:L- 92.3 0.14 4.8E-06 51.6 5.6 33 158-190 5-38 (326)
308 1zej_A HBD-9, 3-hydroxyacyl-CO 92.3 0.094 3.2E-06 52.0 4.2 34 156-190 11-44 (293)
309 3oc4_A Oxidoreductase, pyridin 92.2 0.14 4.8E-06 53.9 5.8 37 157-193 147-183 (452)
310 3doj_A AT3G25530, dehydrogenas 92.2 0.14 4.6E-06 51.2 5.3 36 156-191 20-55 (310)
311 3qha_A Putative oxidoreductase 92.2 0.098 3.4E-06 51.9 4.2 35 157-191 15-49 (296)
312 4dio_A NAD(P) transhydrogenase 92.2 0.13 4.4E-06 53.2 5.1 34 157-190 190-223 (405)
313 3g0o_A 3-hydroxyisobutyrate de 92.1 0.12 4.2E-06 51.3 4.9 34 157-190 7-40 (303)
314 3gg2_A Sugar dehydrogenase, UD 92.1 0.12 4E-06 54.7 4.9 33 158-190 3-35 (450)
315 3dtt_A NADP oxidoreductase; st 92.1 0.14 4.7E-06 49.3 5.0 35 156-190 18-52 (245)
316 1lld_A L-lactate dehydrogenase 92.0 0.13 4.5E-06 51.4 4.9 34 157-190 7-42 (319)
317 3ghy_A Ketopantoate reductase 91.9 0.14 4.8E-06 51.7 5.1 32 158-189 4-35 (335)
318 4a7p_A UDP-glucose dehydrogena 91.9 0.14 4.9E-06 53.8 5.3 35 157-191 8-42 (446)
319 3p2y_A Alanine dehydrogenase/p 91.8 0.13 4.5E-06 52.7 4.8 34 157-190 184-217 (381)
320 3g79_A NDP-N-acetyl-D-galactos 91.8 0.15 5.1E-06 54.2 5.2 35 157-191 18-54 (478)
321 3iwa_A FAD-dependent pyridine 91.6 0.21 7.3E-06 52.8 6.3 61 157-237 159-220 (472)
322 2xve_A Flavin-containing monoo 91.5 0.19 6.3E-06 53.3 5.7 36 157-192 197-232 (464)
323 4g65_A TRK system potassium up 91.5 0.078 2.7E-06 56.2 2.8 35 156-190 2-36 (461)
324 1bg6_A N-(1-D-carboxylethyl)-L 91.5 0.15 5.2E-06 51.7 4.9 33 158-190 5-37 (359)
325 3vtf_A UDP-glucose 6-dehydroge 91.4 0.2 6.7E-06 52.6 5.6 35 155-189 19-53 (444)
326 1z82_A Glycerol-3-phosphate de 91.4 0.16 5.4E-06 51.3 4.9 33 157-189 14-46 (335)
327 3pef_A 6-phosphogluconate dehy 91.4 0.16 5.6E-06 49.9 4.8 34 158-191 2-35 (287)
328 2hjr_A Malate dehydrogenase; m 91.4 0.18 6.1E-06 50.9 5.1 33 158-190 15-48 (328)
329 1t2d_A LDH-P, L-lactate dehydr 91.3 0.19 6.7E-06 50.4 5.3 34 157-190 4-38 (322)
330 4dna_A Probable glutathione re 91.3 0.24 8.2E-06 52.3 6.3 60 157-237 170-229 (463)
331 1vdc_A NTR, NADPH dependent th 91.1 0.16 5.6E-06 50.6 4.5 36 157-192 159-194 (333)
332 2vns_A Metalloreductase steap3 91.0 0.22 7.4E-06 46.8 5.0 34 157-190 28-61 (215)
333 1mv8_A GMD, GDP-mannose 6-dehy 91.0 0.16 5.6E-06 53.3 4.6 32 159-190 2-33 (436)
334 3qsg_A NAD-binding phosphogluc 91.0 0.17 5.8E-06 50.6 4.5 34 156-189 23-57 (312)
335 2q7v_A Thioredoxin reductase; 91.0 0.17 5.9E-06 50.3 4.6 35 157-191 152-186 (325)
336 3tl2_A Malate dehydrogenase; c 90.9 0.23 7.9E-06 49.7 5.3 33 157-189 8-41 (315)
337 3ego_A Probable 2-dehydropanto 90.9 0.19 6.4E-06 50.2 4.6 32 158-190 3-34 (307)
338 2uyy_A N-PAC protein; long-cha 90.8 0.25 8.7E-06 49.2 5.7 34 157-190 30-63 (316)
339 3oj0_A Glutr, glutamyl-tRNA re 90.8 0.086 3E-06 46.0 1.9 34 157-190 21-54 (144)
340 3hwr_A 2-dehydropantoate 2-red 90.8 0.19 6.7E-06 50.3 4.8 33 157-190 19-51 (318)
341 4dll_A 2-hydroxy-3-oxopropiona 90.8 0.21 7.2E-06 50.1 5.0 34 157-190 31-64 (320)
342 3pdu_A 3-hydroxyisobutyrate de 90.8 0.18 6.1E-06 49.6 4.4 34 158-191 2-35 (287)
343 2v6b_A L-LDH, L-lactate dehydr 90.8 0.2 6.8E-06 49.9 4.8 32 159-190 2-35 (304)
344 1trb_A Thioredoxin reductase; 90.8 0.18 6.2E-06 49.9 4.5 36 157-192 145-180 (320)
345 2qyt_A 2-dehydropantoate 2-red 90.8 0.16 5.3E-06 50.6 4.0 32 157-188 8-45 (317)
346 3o0h_A Glutathione reductase; 90.7 0.28 9.4E-06 52.2 6.1 60 157-237 191-250 (484)
347 2a87_A TRXR, TR, thioredoxin r 90.7 0.18 6.3E-06 50.4 4.5 35 157-191 155-189 (335)
348 3l6d_A Putative oxidoreductase 90.7 0.29 9.8E-06 48.7 5.8 34 157-190 9-42 (306)
349 1jw9_B Molybdopterin biosynthe 90.6 0.2 7E-06 48.3 4.5 34 157-190 31-65 (249)
350 1zcj_A Peroxisomal bifunctiona 90.6 0.22 7.6E-06 52.7 5.2 34 157-190 37-70 (463)
351 1txg_A Glycerol-3-phosphate de 90.5 0.19 6.7E-06 50.3 4.5 30 159-188 2-31 (335)
352 3pid_A UDP-glucose 6-dehydroge 90.5 0.2 6.8E-06 52.4 4.6 34 156-190 35-68 (432)
353 4e21_A 6-phosphogluconate dehy 90.4 0.23 7.8E-06 50.7 4.9 34 157-190 22-55 (358)
354 1nyt_A Shikimate 5-dehydrogena 90.3 0.25 8.6E-06 48.2 5.0 34 157-190 119-152 (271)
355 1x13_A NAD(P) transhydrogenase 90.3 0.23 7.9E-06 51.5 4.9 34 157-190 172-205 (401)
356 3phh_A Shikimate dehydrogenase 90.2 0.28 9.6E-06 47.8 5.1 34 157-190 118-151 (269)
357 3dfu_A Uncharacterized protein 90.2 0.11 3.8E-06 49.5 2.1 35 156-190 5-39 (232)
358 3l9w_A Glutathione-regulated p 90.2 0.22 7.6E-06 51.8 4.7 35 157-191 4-38 (413)
359 2vdc_G Glutamate synthase [NAD 90.1 0.27 9.3E-06 51.9 5.4 36 156-191 263-299 (456)
360 2gv8_A Monooxygenase; FMO, FAD 90.1 0.21 7.3E-06 52.4 4.5 36 157-192 212-248 (447)
361 1l7d_A Nicotinamide nucleotide 90.0 0.27 9.3E-06 50.7 5.1 35 156-190 171-205 (384)
362 1y6j_A L-lactate dehydrogenase 90.0 0.26 9E-06 49.4 4.9 35 156-190 6-42 (318)
363 2h78_A Hibadh, 3-hydroxyisobut 89.9 0.26 8.7E-06 48.8 4.7 33 158-190 4-36 (302)
364 3pqe_A L-LDH, L-lactate dehydr 89.9 0.29 9.8E-06 49.3 5.0 35 156-190 4-40 (326)
365 1guz_A Malate dehydrogenase; o 89.8 0.29 1E-05 48.8 5.0 33 158-190 1-35 (310)
366 3cky_A 2-hydroxymethyl glutara 89.7 0.28 9.4E-06 48.5 4.8 34 157-190 4-37 (301)
367 1jay_A Coenzyme F420H2:NADP+ o 89.7 0.28 9.6E-06 45.6 4.6 32 159-190 2-34 (212)
368 2a9f_A Putative malic enzyme ( 89.7 0.3 1E-05 50.1 4.9 35 156-190 187-222 (398)
369 3mog_A Probable 3-hydroxybutyr 89.6 0.27 9.3E-06 52.3 4.8 33 158-190 6-38 (483)
370 4ezb_A Uncharacterized conserv 89.6 0.26 9E-06 49.3 4.5 34 157-190 24-58 (317)
371 1pjc_A Protein (L-alanine dehy 89.6 0.32 1.1E-05 49.7 5.2 33 158-190 168-200 (361)
372 4huj_A Uncharacterized protein 89.5 0.19 6.4E-06 47.4 3.1 33 158-190 24-57 (220)
373 2q3e_A UDP-glucose 6-dehydroge 89.4 0.29 9.9E-06 51.9 4.9 32 158-189 6-39 (467)
374 3f8d_A Thioredoxin reductase ( 89.4 0.54 1.8E-05 46.2 6.6 39 157-197 15-53 (323)
375 1vl6_A Malate oxidoreductase; 89.3 0.32 1.1E-05 49.7 4.9 34 156-189 191-225 (388)
376 1p77_A Shikimate 5-dehydrogena 89.2 0.27 9.1E-06 48.1 4.1 34 157-190 119-152 (272)
377 4g6h_A Rotenone-insensitive NA 89.2 0.33 1.1E-05 52.0 5.2 59 158-237 218-290 (502)
378 1ur5_A Malate dehydrogenase; o 89.2 0.34 1.2E-05 48.3 5.0 33 158-190 3-36 (309)
379 1a5z_A L-lactate dehydrogenase 89.1 0.3 1E-05 49.0 4.5 32 159-190 2-35 (319)
380 3gvi_A Malate dehydrogenase; N 89.1 0.37 1.3E-05 48.4 5.2 34 157-190 7-41 (324)
381 2eez_A Alanine dehydrogenase; 89.0 0.36 1.2E-05 49.4 5.2 34 157-190 166-199 (369)
382 1dlj_A UDP-glucose dehydrogena 89.0 0.24 8.1E-06 51.5 3.8 31 159-190 2-32 (402)
383 3lzw_A Ferredoxin--NADP reduct 88.9 0.35 1.2E-05 47.9 4.8 41 157-197 7-47 (332)
384 4gbj_A 6-phosphogluconate dehy 88.9 0.3 1E-05 48.4 4.3 34 158-191 6-39 (297)
385 1yqg_A Pyrroline-5-carboxylate 88.9 0.33 1.1E-05 46.8 4.6 32 159-190 2-34 (263)
386 3ggo_A Prephenate dehydrogenas 88.8 0.43 1.5E-05 47.7 5.4 34 157-190 33-68 (314)
387 2gf2_A Hibadh, 3-hydroxyisobut 88.6 0.37 1.3E-05 47.3 4.8 32 159-190 2-33 (296)
388 2egg_A AROE, shikimate 5-dehyd 88.6 0.36 1.2E-05 47.8 4.7 34 157-190 141-175 (297)
389 2f1k_A Prephenate dehydrogenas 88.6 0.37 1.3E-05 46.9 4.7 32 159-190 2-33 (279)
390 3ktd_A Prephenate dehydrogenas 88.4 0.45 1.5E-05 48.1 5.3 34 157-190 8-41 (341)
391 1hyh_A L-hicdh, L-2-hydroxyiso 88.4 0.36 1.2E-05 48.1 4.5 33 158-190 2-36 (309)
392 3ew7_A LMO0794 protein; Q8Y8U8 88.4 0.46 1.6E-05 44.0 5.0 32 159-190 2-34 (221)
393 4gwg_A 6-phosphogluconate dehy 88.4 0.43 1.5E-05 50.7 5.3 34 157-190 4-37 (484)
394 3c24_A Putative oxidoreductase 88.3 0.48 1.6E-05 46.5 5.3 33 158-190 12-45 (286)
395 2zyd_A 6-phosphogluconate dehy 88.3 0.36 1.2E-05 51.3 4.7 35 156-190 14-48 (480)
396 1oju_A MDH, malate dehydrogena 88.3 0.38 1.3E-05 47.6 4.5 33 158-190 1-35 (294)
397 2vhw_A Alanine dehydrogenase; 88.2 0.44 1.5E-05 48.9 5.2 35 156-190 167-201 (377)
398 2o3j_A UDP-glucose 6-dehydroge 88.2 0.43 1.5E-05 50.8 5.2 32 158-189 10-43 (481)
399 3e8x_A Putative NAD-dependent 88.1 0.46 1.6E-05 44.8 4.9 36 156-191 20-56 (236)
400 2izz_A Pyrroline-5-carboxylate 88.1 0.42 1.4E-05 47.9 4.8 34 157-190 22-59 (322)
401 3r9u_A Thioredoxin reductase; 88.0 0.43 1.5E-05 46.8 4.8 36 157-192 147-182 (315)
402 1evy_A Glycerol-3-phosphate de 88.0 0.23 7.8E-06 50.7 2.8 32 159-190 17-48 (366)
403 1ldn_A L-lactate dehydrogenase 88.0 0.5 1.7E-05 47.2 5.3 34 157-190 6-41 (316)
404 3fbs_A Oxidoreductase; structu 87.9 0.53 1.8E-05 45.7 5.3 51 387-442 175-225 (297)
405 2p4q_A 6-phosphogluconate dehy 87.9 0.47 1.6E-05 50.7 5.3 34 157-190 10-43 (497)
406 2pv7_A T-protein [includes: ch 87.9 0.42 1.4E-05 47.3 4.6 33 158-190 22-55 (298)
407 1yj8_A Glycerol-3-phosphate de 87.8 0.35 1.2E-05 49.6 4.1 34 158-191 22-62 (375)
408 2pgd_A 6-phosphogluconate dehy 87.8 0.46 1.6E-05 50.6 5.1 33 158-190 3-35 (482)
409 1vpd_A Tartronate semialdehyde 87.8 0.42 1.5E-05 47.0 4.6 33 158-190 6-38 (299)
410 3gpi_A NAD-dependent epimerase 87.8 0.55 1.9E-05 45.7 5.4 34 158-191 4-37 (286)
411 3tnl_A Shikimate dehydrogenase 87.7 0.52 1.8E-05 47.1 5.2 34 156-189 153-187 (315)
412 2rcy_A Pyrroline carboxylate r 87.7 0.47 1.6E-05 45.7 4.8 34 158-191 5-42 (262)
413 3don_A Shikimate dehydrogenase 87.7 0.35 1.2E-05 47.4 3.8 34 157-190 117-151 (277)
414 2rir_A Dipicolinate synthase, 87.7 0.52 1.8E-05 46.7 5.2 35 156-190 156-190 (300)
415 3d0o_A L-LDH 1, L-lactate dehy 87.6 0.48 1.6E-05 47.4 4.9 33 157-189 6-40 (317)
416 3d4o_A Dipicolinate synthase s 87.5 0.54 1.8E-05 46.4 5.2 35 156-190 154-188 (293)
417 2hk9_A Shikimate dehydrogenase 87.5 0.44 1.5E-05 46.5 4.5 34 157-190 129-162 (275)
418 1ju2_A HydroxynitrIle lyase; f 87.5 0.31 1E-05 52.7 3.6 37 156-193 25-61 (536)
419 3u62_A Shikimate dehydrogenase 87.5 0.58 2E-05 45.2 5.2 32 159-190 110-142 (253)
420 3ojo_A CAP5O; rossmann fold, c 87.5 0.43 1.5E-05 49.9 4.5 34 157-190 11-44 (431)
421 4ffl_A PYLC; amino acid, biosy 87.4 0.54 1.9E-05 47.7 5.3 34 158-191 2-35 (363)
422 3itj_A Thioredoxin reductase 1 87.4 0.9 3.1E-05 45.0 6.8 54 387-442 85-141 (338)
423 3p7m_A Malate dehydrogenase; p 87.4 0.55 1.9E-05 47.0 5.2 34 157-190 5-39 (321)
424 3h2s_A Putative NADH-flavin re 87.4 0.54 1.9E-05 43.7 4.9 32 159-190 2-34 (224)
425 3vrd_B FCCB subunit, flavocyto 87.3 0.25 8.6E-06 50.9 2.7 35 157-191 2-38 (401)
426 1x0v_A GPD-C, GPDH-C, glycerol 87.3 0.32 1.1E-05 49.3 3.4 34 158-191 9-49 (354)
427 3ond_A Adenosylhomocysteinase; 87.3 0.44 1.5E-05 50.3 4.5 35 156-190 264-298 (488)
428 3ldh_A Lactate dehydrogenase; 87.3 0.54 1.8E-05 47.2 5.0 35 156-190 20-56 (330)
429 2wtb_A MFP2, fatty acid multif 87.3 0.5 1.7E-05 52.9 5.3 33 158-190 313-345 (725)
430 2cvz_A Dehydrogenase, 3-hydrox 87.2 0.45 1.6E-05 46.5 4.4 32 158-190 2-33 (289)
431 3nep_X Malate dehydrogenase; h 87.2 0.49 1.7E-05 47.3 4.7 33 158-190 1-35 (314)
432 3fbt_A Chorismate mutase and s 87.2 0.56 1.9E-05 46.1 4.9 35 156-190 121-156 (282)
433 3jyo_A Quinate/shikimate dehyd 87.1 0.57 2E-05 46.0 5.0 35 156-190 126-161 (283)
434 2g5c_A Prephenate dehydrogenas 87.1 0.52 1.8E-05 45.9 4.8 33 158-190 2-36 (281)
435 3gt0_A Pyrroline-5-carboxylate 87.1 0.6 2.1E-05 44.7 5.1 33 158-190 3-39 (247)
436 2i6t_A Ubiquitin-conjugating e 87.1 0.5 1.7E-05 46.9 4.6 33 158-190 15-49 (303)
437 3ius_A Uncharacterized conserv 87.1 0.48 1.6E-05 46.0 4.5 33 158-190 6-38 (286)
438 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.1 0.5 1.7E-05 50.2 4.9 33 158-190 2-34 (478)
439 4b4o_A Epimerase family protei 87.0 0.64 2.2E-05 45.6 5.4 35 158-192 1-36 (298)
440 3pwz_A Shikimate dehydrogenase 86.8 0.61 2.1E-05 45.5 5.0 35 156-190 119-154 (272)
441 3vku_A L-LDH, L-lactate dehydr 86.8 0.59 2E-05 46.9 4.9 34 156-189 8-43 (326)
442 3tri_A Pyrroline-5-carboxylate 86.6 0.7 2.4E-05 45.2 5.3 33 158-190 4-39 (280)
443 3h28_A Sulfide-quinone reducta 86.5 0.41 1.4E-05 49.9 3.8 51 386-441 200-254 (430)
444 3h8v_A Ubiquitin-like modifier 86.5 0.51 1.8E-05 46.5 4.3 34 157-190 36-70 (292)
445 1i36_A Conserved hypothetical 86.4 0.53 1.8E-05 45.4 4.3 30 159-188 2-31 (264)
446 3o8q_A Shikimate 5-dehydrogena 86.4 0.63 2.2E-05 45.7 4.9 35 156-190 125-160 (281)
447 3d1l_A Putative NADP oxidoredu 86.4 0.54 1.9E-05 45.4 4.4 33 158-190 11-44 (266)
448 2ahr_A Putative pyrroline carb 86.3 0.5 1.7E-05 45.5 4.0 33 158-190 4-36 (259)
449 3c7a_A Octopine dehydrogenase; 86.2 0.36 1.2E-05 50.0 3.1 30 158-187 3-33 (404)
450 3t4e_A Quinate/shikimate dehyd 86.2 0.72 2.4E-05 46.0 5.2 34 156-189 147-181 (312)
451 4aj2_A L-lactate dehydrogenase 86.2 0.73 2.5E-05 46.3 5.3 34 156-189 18-53 (331)
452 2aef_A Calcium-gated potassium 86.1 0.28 9.5E-06 46.6 2.0 35 156-191 8-42 (234)
453 3dhn_A NAD-dependent epimerase 85.9 0.53 1.8E-05 43.9 3.9 34 158-191 5-39 (227)
454 1wdk_A Fatty oxidation complex 85.9 0.48 1.7E-05 53.0 4.2 34 157-190 314-347 (715)
455 2qrj_A Saccharopine dehydrogen 85.9 0.6 2.1E-05 47.9 4.5 39 157-195 214-257 (394)
456 1zud_1 Adenylyltransferase THI 85.8 0.7 2.4E-05 44.5 4.8 34 157-190 28-62 (251)
457 1hdo_A Biliverdin IX beta redu 85.8 0.75 2.6E-05 41.9 4.8 33 158-190 4-37 (206)
458 1ez4_A Lactate dehydrogenase; 85.7 0.7 2.4E-05 46.3 4.9 34 156-189 4-39 (318)
459 1np3_A Ketol-acid reductoisome 85.7 0.73 2.5E-05 46.5 5.1 33 158-190 17-49 (338)
460 1nvt_A Shikimate 5'-dehydrogen 85.6 0.53 1.8E-05 46.3 3.9 33 157-190 128-160 (287)
461 1cjc_A Protein (adrenodoxin re 85.6 0.66 2.3E-05 49.0 4.9 45 399-443 270-333 (460)
462 4id9_A Short-chain dehydrogena 85.6 0.73 2.5E-05 46.1 5.0 37 155-191 17-54 (347)
463 1yb4_A Tartronic semialdehyde 85.6 0.53 1.8E-05 46.2 3.9 32 158-190 4-35 (295)
464 2d5c_A AROE, shikimate 5-dehyd 85.6 0.79 2.7E-05 44.3 5.1 32 159-190 118-149 (263)
465 1edz_A 5,10-methylenetetrahydr 85.4 0.69 2.4E-05 46.2 4.6 34 156-189 176-210 (320)
466 3rui_A Ubiquitin-like modifier 85.3 0.77 2.6E-05 46.2 4.9 34 157-190 34-68 (340)
467 1o94_A Tmadh, trimethylamine d 85.3 0.72 2.5E-05 51.7 5.3 34 157-190 528-563 (729)
468 1lu9_A Methylene tetrahydromet 85.2 0.84 2.9E-05 44.8 5.1 34 157-190 119-153 (287)
469 3gvp_A Adenosylhomocysteinase 85.1 0.69 2.4E-05 48.0 4.5 35 156-190 219-253 (435)
470 3vps_A TUNA, NAD-dependent epi 85.0 0.86 2.9E-05 44.8 5.2 35 157-191 7-42 (321)
471 1npy_A Hypothetical shikimate 84.9 0.84 2.9E-05 44.5 4.9 33 157-189 119-152 (271)
472 2iz1_A 6-phosphogluconate dehy 84.9 0.77 2.6E-05 48.7 5.0 34 157-190 5-38 (474)
473 1leh_A Leucine dehydrogenase; 84.8 0.84 2.9E-05 46.5 5.0 34 156-189 172-205 (364)
474 1gpe_A Protein (glucose oxidas 84.7 0.76 2.6E-05 50.2 4.9 37 156-192 23-60 (587)
475 2pzm_A Putative nucleotide sug 84.6 0.95 3.3E-05 45.1 5.3 35 156-190 19-54 (330)
476 3pl8_A Pyranose 2-oxidase; sub 84.5 0.67 2.3E-05 51.0 4.4 51 399-449 273-330 (623)
477 4hv4_A UDP-N-acetylmuramate--L 84.4 0.67 2.3E-05 49.4 4.3 35 156-190 21-56 (494)
478 4a9w_A Monooxygenase; baeyer-v 84.2 0.7 2.4E-05 46.1 4.1 33 157-190 163-195 (357)
479 3fi9_A Malate dehydrogenase; s 84.2 0.95 3.3E-05 45.7 5.1 34 157-190 8-44 (343)
480 2dbq_A Glyoxylate reductase; D 84.1 0.98 3.3E-05 45.5 5.1 36 156-191 149-184 (334)
481 1gpj_A Glutamyl-tRNA reductase 83.9 0.9 3.1E-05 47.1 4.9 35 156-190 166-201 (404)
482 3h5n_A MCCB protein; ubiquitin 83.9 0.9 3.1E-05 46.1 4.8 34 157-190 118-152 (353)
483 3ce6_A Adenosylhomocysteinase; 83.9 0.8 2.7E-05 48.6 4.5 35 156-190 273-307 (494)
484 3obb_A Probable 3-hydroxyisobu 83.8 0.9 3.1E-05 45.0 4.6 33 158-190 4-36 (300)
485 3q2o_A Phosphoribosylaminoimid 83.7 1.3 4.6E-05 45.3 6.1 36 156-191 13-48 (389)
486 3orq_A N5-carboxyaminoimidazol 83.7 1.5 5.1E-05 44.8 6.4 36 156-191 11-46 (377)
487 2zqz_A L-LDH, L-lactate dehydr 83.3 1.1 3.7E-05 45.0 5.1 34 156-189 8-43 (326)
488 1mld_A Malate dehydrogenase; o 83.3 0.93 3.2E-05 45.2 4.5 33 158-190 1-36 (314)
489 2yjz_A Metalloreductase steap4 83.9 0.23 7.8E-06 46.2 0.0 35 157-191 19-53 (201)
490 3zwc_A Peroxisomal bifunctiona 83.2 0.94 3.2E-05 50.7 4.9 34 157-190 316-349 (742)
491 2gcg_A Glyoxylate reductase/hy 83.1 1 3.6E-05 45.2 4.8 35 156-190 154-188 (330)
492 2d4a_B Malate dehydrogenase; a 82.9 1 3.5E-05 44.8 4.7 32 159-190 1-33 (308)
493 2x0j_A Malate dehydrogenase; o 82.9 1 3.5E-05 44.5 4.5 33 158-190 1-35 (294)
494 3hyw_A Sulfide-quinone reducta 82.8 1.9 6.5E-05 44.8 6.9 34 158-191 3-38 (430)
495 3h9u_A Adenosylhomocysteinase; 82.7 0.98 3.4E-05 46.9 4.5 35 156-190 210-244 (436)
496 3o38_A Short chain dehydrogena 82.5 1.2 4.1E-05 42.8 4.9 35 156-190 21-57 (266)
497 3enk_A UDP-glucose 4-epimerase 82.4 1.4 4.8E-05 43.8 5.5 36 156-191 4-40 (341)
498 3d3w_A L-xylulose reductase; u 82.4 1.7 5.7E-05 41.0 5.8 34 157-190 7-41 (244)
499 3dqp_A Oxidoreductase YLBE; al 82.3 0.96 3.3E-05 42.0 4.0 33 159-191 2-35 (219)
500 3b1f_A Putative prephenate deh 82.3 1.2 4E-05 43.6 4.7 33 158-190 7-41 (290)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2.8e-46 Score=408.22 Aligned_cols=403 Identities=24% Similarity=0.349 Sum_probs=282.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCc--
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE-- 235 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~-- 235 (579)
++|||||||++||+||++|+++|++|+||||++.+||++.|++.+||.+|.|++++.+ +..+.+++..+|..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~------~~~~~~l~~~~g~~~~ 75 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITD------PSAIEELFALAGKQLK 75 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSC------THHHHHHHHTTTCCGG
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecC------chhHHHHHHHhcchhh
Confidence 6899999999999999999999999999999999999999999999999999998863 34567788887754
Q ss_pred --eeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhh-hhhhccchhhHHHhhhh
Q 008069 236 --MEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNS-LELKSLEEPIYLFGQFF 312 (579)
Q Consensus 236 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 312 (579)
++..+......+.+++|..+.++.+...+...+.+.+|.+.+++.+|++.....+..... +...+.... ..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 151 (501)
T 4dgk_A 76 EYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSF----RDML 151 (501)
T ss_dssp GTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCH----HHHH
T ss_pred hceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchh----hhhh
Confidence 334454555667778999999999999999999999999999999988776554332110 000001111 1111
Q ss_pred cChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHhhhhcCccceeCCChHHHHHHH
Q 008069 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSL 392 (579)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~gG~~~l~~aL 392 (579)
........+ ...+++.+.+.+++.++.++.++...+.+.+ ..+...++.+..+... ....|.++|+||+++++++|
T Consensus 152 ~~~~~~~~l--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g-~~p~~~~~~~~~~~~~-~~~~G~~~p~GG~~~l~~aL 227 (501)
T 4dgk_A 152 RAAPQLAKL--QAWRSVYSKVASYIEDEHLRQAFSFHSLLVG-GNPFATSSIYTLIHAL-EREWGVWFPRGGTGALVQGM 227 (501)
T ss_dssp HSGGGTTTS--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH-SCC--CCCTHHHHHHH-HSCCCEEEETTHHHHHHHHH
T ss_pred hhhhhhhhh--hhcccHHHHHHHHhccHHHHhhhhhhhcccC-CCcchhhhhhhhhhhh-hccCCeEEeCCCCcchHHHH
Confidence 100000000 0123677889999999999999887766654 4555655554443332 33467889999999999999
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCCeE
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFL 472 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~ 472 (579)
++.++++|++|++|++|++|..+++++++|+++||+++.||.||++++++.++..|+++...+....+.++.++++++.+
T Consensus 228 ~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~ 307 (501)
T 4dgk_A 228 IKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLF 307 (501)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------------------CCEEE
T ss_pred HHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCcee
Confidence 99999999999999999999999999999999999999999999999999998889988777766666777788889999
Q ss_pred EEEEeecCCcCCCCCCccceeeccchhhh-cC--------CcceEEEEcCCCCCCCCCCCCeeEEEEEeccchhhhcCCC
Q 008069 473 SIHMGVKAEVLPPDTDCHHFVLEDDWNRL-EE--------PYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLA 543 (579)
Q Consensus 473 ~v~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~--------p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~~~~~w~~~~ 543 (579)
++|++++.+. +....|++++.+++... +. ...++|+++||..||+++|+|++++++++++++..|.
T Consensus 308 ~~~~~l~~~~--~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~--- 382 (501)
T 4dgk_A 308 VLYFGLNHHH--DQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTA--- 382 (501)
T ss_dssp EEEEEESSCC--TTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTS---
T ss_pred EEEecccCCc--cccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccc---
Confidence 9999999875 34455677776655431 10 1246899999999999999999999999987755554
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEC
Q 008069 544 QKDYDAKKELVADEIINRLENKLFPGLKQSIAFREV 579 (579)
Q Consensus 544 ~~~y~~~ke~~~~~il~~le~~~~P~l~~~I~~~~v 579 (579)
+.+|++.|+++++++++.|+++++|+|+++|+++++
T Consensus 383 ~~~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~ 418 (501)
T 4dgk_A 383 NLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRM 418 (501)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEE
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEE
Confidence 357999999999999999996678999999998764
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.2e-30 Score=278.21 Aligned_cols=348 Identities=21% Similarity=0.288 Sum_probs=243.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCcee
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEME 237 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~~ 237 (579)
+||+|||||++||+||+.|+++|++|+||||++.+||++.++..+|+.+|.|++.+.... ....+.++++++|+...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~---~~~~~~~l~~~lg~~~~ 77 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNG---PGGPLACFLKEVEASVN 77 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTG---GGSHHHHHHHHTTCCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCC---CccHHHHHHHHhCCCce
Confidence 589999999999999999999999999999999999999999999999999987665322 23357789999998776
Q ss_pred EeeCC-CeEEEEcCC--------CceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHH
Q 008069 238 VIPDP-TTVHFHLPN--------DLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLF 308 (579)
Q Consensus 238 ~~~~~-~~~~~~~~~--------g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (579)
..+.. ....+.+.+ +..+.+.. .. ..+. .....++. ..+... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~--~~~~~~~~-------~~~~~~--~--------- 129 (425)
T 3ka7_A 78 IVRSEMTTVRVPLKKGNPDYVKGFKDISFND-FP-------SLLS--YKDRMKIA-------LLIVST--R--------- 129 (425)
T ss_dssp EEECCCCEEEEESSTTCCSSTTCEEEEEGGG-GG-------GGSC--HHHHHHHH-------HHHHHT--T---------
T ss_pred EEecCCceEEeecCCCcccccccccceehhh-hh-------hhCC--HHHHHHHH-------HHHHhh--h---------
Confidence 55533 222222222 22222111 00 0000 00000000 000000 0
Q ss_pred hhhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHhh-hhcCccceeCCChHH
Q 008069 309 GQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCD-RHFGGINYPVGGVGG 387 (579)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~p~gG~~~ 387 (579)
. ......++.+++.+++.++.++.++...+....+..+.+.++......+.. ...++.+++.||++.
T Consensus 130 -----~-------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~ 197 (425)
T 3ka7_A 130 -----K-------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKG 197 (425)
T ss_dssp -----T-------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHH
T ss_pred -----h-------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHH
Confidence 0 001245788999999999988888777665555567777776432222111 233678899999999
Q ss_pred HHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCC-CCC--ChHHHHHHHh
Q 008069 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG-EQL--PKEEENFQKL 464 (579)
Q Consensus 388 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~-~~l--p~~~~~~~~~ 464 (579)
++++|++.++++|++|+++++|++|..+++++++|++. |++++||.||+|++++.+. +|+++ ..+ |....+.+++
T Consensus 198 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~-~ll~~~~~~~~~~~~~~~~~~ 275 (425)
T 3ka7_A 198 IIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATA-VLCSEALSKEADAAYFKMVGT 275 (425)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHH-HHTTTTCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHH-HhcCCcccccCCHHHHHHhhC
Confidence 99999999999999999999999999999999989875 7789999999999999875 67764 333 6666666777
Q ss_pred hccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEeccchhhhcCCCh
Q 008069 465 YVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQ 544 (579)
Q Consensus 465 ~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~~~~~w~~~~~ 544 (579)
+.+++ .++++++++++.+ ..|+++++.++.. ...+..+|..||+++|+|+++++++... .|.+.
T Consensus 276 ~~~~~-~~~v~l~~~~~~~----~~~~~~~~~~~~~------~~~~~~~s~~~p~~ap~G~~~l~~~~~~---~~~~~-- 339 (425)
T 3ka7_A 276 LQPSA-GIKICLAADEPLV----GHTGVLLTPYTRR------INGVNEVTQADPELAPPGKHLTMCHQYV---APENV-- 339 (425)
T ss_dssp CCCBE-EEEEEEEESSCSS----CSSSEEECCSSSS------EEEEECGGGTCGGGSCTTCEEEEEEEEE---CGGGG--
T ss_pred cCCCc-eEEEEeecCCCcc----CcCEEEECCChhh------cceEEeccCCCCCcCCCCCeEEEEEecc---ccccc--
Confidence 76654 5789999998753 3466666654321 2457889999999999999999886543 23321
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008069 545 KDYDAKKELVADEIINRLENKLFPGLK 571 (579)
Q Consensus 545 ~~y~~~ke~~~~~il~~le~~~~P~l~ 571 (579)
+ ..++.++.+++.|+ +++|+.+
T Consensus 340 ---~-~~~~~~~~~~~~l~-~~~p~~~ 361 (425)
T 3ka7_A 340 ---K-NLESEIEMGLEDLK-EIFPGKR 361 (425)
T ss_dssp ---G-GHHHHHHHHHHHHH-HHSTTCC
T ss_pred ---c-chHHHHHHHHHHHH-HhCCCCc
Confidence 1 12445699999999 8999854
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=1.5e-29 Score=269.97 Aligned_cols=340 Identities=19% Similarity=0.242 Sum_probs=242.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCcee
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEME 237 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~~ 237 (579)
+||+|||||++||++|+.|+++|++|+|+||++.+||++.++..+|+.+|.|++.+..... ...+.++++++|+..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~---~~~~~~l~~~lg~~~~ 77 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGE---DGPLAHLLRILGAKVE 77 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTT---SSHHHHHHHHHTCCCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCC---ChHHHHHHHHhCCcce
Confidence 4899999999999999999999999999999999999999999999999999877654322 2257788999998766
Q ss_pred EeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcChhh
Q 008069 238 VIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLE 317 (579)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (579)
..+......+.+ +|..+.++.... ...+.+...+..+..... . .
T Consensus 78 ~~~~~~~~~~~~-~g~~~~~~~~~~-------~l~~~~~~~~~~~~~~~~----------------------~---~--- 121 (421)
T 3nrn_A 78 IVNSNPKGKILW-EGKIFHYRESWK-------FLSVKEKAKALKLLAEIR----------------------M---N--- 121 (421)
T ss_dssp EEECSSSCEEEE-TTEEEEGGGGGG-------GCC--------CCHHHHH----------------------T---T---
T ss_pred EEECCCCeEEEE-CCEEEEcCCchh-------hCCHhHHHHHHHHHHHHH----------------------h---c---
Confidence 555333333333 555554433211 011111111111110000 0 0
Q ss_pred hhHHhhhccccHHHHHHHh-cCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHhh-hhcCccceeCCChHHHHHHHHHH
Q 008069 318 CLTLAYYLPQNAGNIARKY-IKDPQLLSFIDAECFIVSTINALQTPMINASMVLCD-RHFGGINYPVGGVGGIAKSLAKG 395 (579)
Q Consensus 318 ~~~~~~~~~~s~~~~l~~~-~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~p~gG~~~l~~aL~~~ 395 (579)
.......++.+++.++ +.++.++.++........+..+.+.++......+.. ...++.++|.||++.++++|++.
T Consensus 122 ---~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~ 198 (421)
T 3nrn_A 122 ---KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERI 198 (421)
T ss_dssp ---CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHH
T ss_pred ---cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHH
Confidence 0001125778889888 888888887776665555667777776432221111 22367889999999999999999
Q ss_pred HHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEE
Q 008069 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIH 475 (579)
Q Consensus 396 l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~ 475 (579)
++++|++|+++++|++|..+++++ | +.+|++++||.||+|++++.+. +|++.+.+|+...+.+.++.++ +.++++
T Consensus 199 ~~~~G~~i~~~~~V~~i~~~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~~~~~~~~~~~~~~~~~~~-~~~~v~ 273 (421)
T 3nrn_A 199 IMENKGKILTRKEVVEINIEEKKV--Y-TRDNEEYSFDVAISNVGVRETV-KLIGRDYFDRDYLKQVDSIEPS-EGIKFN 273 (421)
T ss_dssp HHTTTCEEESSCCEEEEETTTTEE--E-ETTCCEEECSEEEECSCHHHHH-HHHCGGGSCHHHHHHHHTCCCC-CEEEEE
T ss_pred HHHCCCEEEcCCeEEEEEEECCEE--E-EeCCcEEEeCEEEECCCHHHHH-HhcCcccCCHHHHHHHhCCCCC-ceEEEE
Confidence 999999999999999999888887 5 5678889999999999999875 6887545787776777777776 678999
Q ss_pred EeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEeccchhhhcCCChhhHHHHHHHHH
Q 008069 476 MGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVA 555 (579)
Q Consensus 476 lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~~~~~w~~~~~~~y~~~ke~~~ 555 (579)
++++++.. ..+++++.++.+ + -.++.+|..||+++|+|+++++++.+.+.. . . ++..
T Consensus 274 l~~~~~~~----~~~~~~~~~~~~-~------~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~-----~------~-~~~~ 330 (421)
T 3nrn_A 274 LAVPGEPR----IGNTIVFTPGLM-I------NGFNEPSALDKSLAREGYTLIMAHMALKNG-----N------V-KKAI 330 (421)
T ss_dssp EEEESSCS----SCSSEEECTTSS-S------CEEECGGGTCGGGSCTTEEEEEEEEECTTC-----C------H-HHHH
T ss_pred EEEcCCcc----cCCeEEEcCCcc-e------eeEeccCCCCCCcCCCCceEEEEEEeeccc-----c------H-HHHH
Confidence 99998742 236677766543 2 136888999999999999999988764311 0 1 2348
Q ss_pred HHHHHHHHHhhCC
Q 008069 556 DEIINRLENKLFP 568 (579)
Q Consensus 556 ~~il~~le~~~~P 568 (579)
+.++++|+ +++|
T Consensus 331 ~~~~~~L~-~~~p 342 (421)
T 3nrn_A 331 EKGWEELL-EIFP 342 (421)
T ss_dssp HHHHHHHH-HHCT
T ss_pred HHHHHHHH-HHcC
Confidence 89999999 8999
No 4
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.95 E-value=8.1e-27 Score=252.70 Aligned_cols=356 Identities=17% Similarity=0.186 Sum_probs=235.5
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
...+||+|||||++||++|+.|+++|++|+|+|+.+.+||++.|+..+|+.+|.|++++.+. ...+.++++++|+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~-----~~~~~~~~~~~gl 88 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDR-----EPATRALAAALNL 88 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETT-----CHHHHHHHHHTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhh-----hHHHHHHHHHcCC
Confidence 34689999999999999999999999999999999999999999999999999999999742 3467899999998
Q ss_pred ceeEeeCC--CeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhh
Q 008069 235 EMEVIPDP--TTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (579)
Q Consensus 235 ~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (579)
........ ....+.+.+|..+.++.+...+... .. .. +... ...+. .++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~---~~-~~------~~~~----~~~~~---------------~~~ 139 (478)
T 2ivd_A 89 EGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLAS---DI-LP------LGAR----LRVAG---------------ELF 139 (478)
T ss_dssp GGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTC---SS-SC------HHHH----HHHHG---------------GGG
T ss_pred cceeeecCccccceEEEECCEEEECCCCHHHhccC---CC-CC------HHHH----HHHhh---------------hhh
Confidence 64444221 2233334556666665554332210 00 00 0000 00000 000
Q ss_pred cChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHH--------------h-------
Q 008069 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVL--------------C------- 371 (579)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~------- 371 (579)
.... ......++.+++++.+.++.++.++........+.++.+.++......+ .
T Consensus 140 ~~~~-----~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (478)
T 2ivd_A 140 SRRA-----PEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQR 214 (478)
T ss_dssp CCCC-----CTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHT
T ss_pred cCCC-----CCCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccc
Confidence 0000 0123467888998888877777776655544555666666543211100 0
Q ss_pred -----hhhc----CccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe---CCCcEEEcCEEEECC
Q 008069 372 -----DRHF----GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGREFYAKTIISNA 439 (579)
Q Consensus 372 -----~~~~----~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~---~dG~~i~Ad~VV~a~ 439 (579)
.... .+.++++||++.++++|++.+ |++|+++++|++|..+++++ .|++ .+|++++||.||+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~-~v~~~~~~~g~~~~ad~vV~a~ 290 (478)
T 2ivd_A 215 QAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLAREDGGW-RLIIEEHGRRAELSVAQVVLAA 290 (478)
T ss_dssp CC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC--CC-EEEEEETTEEEEEECSEEEECS
T ss_pred cccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeE-EEEEeecCCCceEEcCEEEECC
Confidence 0011 567899999999999999888 78999999999999877764 4777 678889999999999
Q ss_pred ChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCC
Q 008069 440 TRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSS 519 (579)
Q Consensus 440 ~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~ 519 (579)
+++.+ .+|+++ +|+...+.++.+.+. +.++++++++++.|+.+ ....++++.. + ..+. ..+..++..+|.
T Consensus 291 ~~~~~-~~ll~~--l~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~-~~~~~~~~~~-~--~~~~--~~~~~~s~~~~~ 360 (478)
T 2ivd_A 291 PAHAT-AKLLRP--LDDALAALVAGIAYA-PIAVVHLGFDAGTLPAP-DGFGFLVPAE-E--QRRM--LGAIHASTTFPF 360 (478)
T ss_dssp CHHHH-HHHHTT--TCHHHHHHHHTCCBC-CEEEEEEEECTTSSCCC-CSSEEECCGG-G--CCSC--CEEEEHHHHCGG
T ss_pred CHHHH-HHHhhc--cCHHHHHHHhcCCCC-cEEEEEEEEccccCCCC-CceEEEecCC-C--CCce--EEEEEEcccCCC
Confidence 99876 467753 787777777777765 57799999998876542 2222333221 0 1111 223444555677
Q ss_pred CCCCCeeEEEEEeccchh-hhcCCChhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008069 520 LAPEGHHILHIFTICSIE-DWEGLAQKDYDAKKELVADEIINRLENKLFPGLK 571 (579)
Q Consensus 520 ~aP~G~~~l~~~~~~~~~-~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~l~ 571 (579)
++|+|++++++++..... .|.. ..++++.+.+++.|+ +++|...
T Consensus 361 ~~p~g~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~-~~~~~~~ 405 (478)
T 2ivd_A 361 RAEGGRVLYSCMVGGARQPGLVE-------QDEDALAALAREELK-ALAGVTA 405 (478)
T ss_dssp GBSTTCEEEEEEEECTTCGGGGG-------SCHHHHHHHHHHHHH-HHHCCCS
T ss_pred cCCCCCEEEEEEeCCcCCccccC-------CCHHHHHHHHHHHHH-HHhCCCC
Confidence 788999888887764332 2322 235788999999999 7888753
No 5
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.95 E-value=3.6e-27 Score=253.94 Aligned_cols=332 Identities=19% Similarity=0.226 Sum_probs=213.7
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCC-ee---------------eccccccccCCCC
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDG-YT---------------FDVGSSVMFGFSD 218 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g-~~---------------~~~G~~~~~g~~~ 218 (579)
+..+||+|||||++||++|+.|+++|++|+|+||++.+||++.++..+| |. ++.|.++..++.+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 3568999999999999999999999999999999999999999988766 33 3455555443332
Q ss_pred CC--ChHHHHHHHHHcCCc--eeEeeCCCeEEEEcCCCceEEecCC-HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHh
Q 008069 219 KG--NLNLITQALAAVGCE--MEVIPDPTTVHFHLPNDLSVRVHRE-YSDFVAELTSKFPHEKEGVLAFYGECWKIFNAL 293 (579)
Q Consensus 219 ~~--~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~ 293 (579)
.- ....+.+++.++|+. ++..+....+ .+.+|..+.++.+ .+.+...+...+ ++..+.+|+.......
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~--~~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~--- 161 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVSGSY--VFKQGKIYKVPANEIEAISSPLMGIF--EKRRMKKFLEWISSYK--- 161 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECCCEE--EEETTEEEECCSSHHHHHHCTTSCHH--HHHHHHHHHHHHHHCB---
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEcccee--EEeCCeEEECCCChHHHHhhhccchh--hHHHHHHHHHHHHHhc---
Confidence 11 123578889999874 2333333322 3457777888877 555443332221 3344445544332211
Q ss_pred hhhhhhccchhhHHHhhhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHH---HHH
Q 008069 294 NSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS---MVL 370 (579)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---~~~ 370 (579)
.. .+.. +. .......++.+++++++.++.++.++.....+.........|..... ...
T Consensus 162 ----~~---~p~~-----~~-------~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~ 222 (453)
T 2bcg_G 162 ----ED---DLST-----HQ-------GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLY 222 (453)
T ss_dssp ----TT---BGGG-----ST-------TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHH
T ss_pred ----cC---Cchh-----hh-------ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHH
Confidence 00 0100 00 00124568899999999999999887554322110001112322222 111
Q ss_pred h---hhhc-CccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEe--CCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 371 C---DRHF-GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILE--QGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 371 ~---~~~~-~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~--~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
. ..+. +.+.+|+||++.++++|++.+++.|++|+++++|++|..+ ++++++|++ +|+++.||.||+|++++..
T Consensus 223 ~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 223 CQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 0 1122 3455999999999999999999999999999999999998 888888887 5778999999999998742
Q ss_pred HhhccCCCCCChHHHHHHHhhc-cCCCeEEEEEeecCCcCCC-CCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCC
Q 008069 445 FGKLLKGEQLPKEEENFQKLYV-KAPSFLSIHMGVKAEVLPP-DTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAP 522 (579)
Q Consensus 445 ~~~Ll~~~~lp~~~~~~~~~~~-~~~s~~~v~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP 522 (579)
++. .+. ++.+.+.+ ++.+.... ....|+++++.. .+. +.+++|++.+|..| +++|
T Consensus 302 --~l~--------------~~~~~~~~~~~i---~~~~~~~~~~~~~~~ii~~~~--~~~-~~~~~~v~~~s~~d-~~aP 358 (453)
T 2bcg_G 302 --KCK--------------STGQRVIRAICI---LNHPVPNTSNADSLQIIIPQS--QLG-RKSDIYVAIVSDAH-NVCS 358 (453)
T ss_dssp --GEE--------------EEEEEEEEEEEE---ESSCCTTSTTCSSEEEEECGG--GTT-CSSCEEEEEEEGGG-TSSC
T ss_pred --hhc--------------ccCCcceeEEEE---EccccCCCCCCccEEEEeCcc--ccC-CCCCEEEEEeCCCC-CCCC
Confidence 221 122 34455544 66654211 122344455431 111 23469999999989 8999
Q ss_pred CCeeEEEEEeccch
Q 008069 523 EGHHILHIFTICSI 536 (579)
Q Consensus 523 ~G~~~l~~~~~~~~ 536 (579)
+|+++++++++.+.
T Consensus 359 ~G~~~~~v~~~~~~ 372 (453)
T 2bcg_G 359 KGHYLAIISTIIET 372 (453)
T ss_dssp TTCEEEEEEEECCS
T ss_pred CCcEEEEEEEecCC
Confidence 99999999998763
No 6
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.95 E-value=8.7e-26 Score=247.45 Aligned_cols=360 Identities=16% Similarity=0.122 Sum_probs=233.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeC-CeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERD-GYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~-g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
..+||+|||||++||+||+.|+++|++|+|+|+++++||++.++..+ |+.+|.|++++.+. ...+.++++++|+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-----~~~~~~l~~~lgl 77 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-----QNRILRLAKELGL 77 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-----CHHHHHHHHHTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-----cHHHHHHHHHcCC
Confidence 35899999999999999999999999999999999999999999885 99999999998752 3457789999998
Q ss_pred ceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcC
Q 008069 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (579)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (579)
+......... .+...+|..+.+....... ..+.....+..++....++...+ .. ..
T Consensus 78 ~~~~~~~~~~-~~~~~~g~~~~~~~~~p~~------~~~~~~~~~~~~~~~~~~~~~~~---~~---~~----------- 133 (520)
T 1s3e_A 78 ETYKVNEVER-LIHHVKGKSYPFRGPFPPV------WNPITYLDHNNFWRTMDDMGREI---PS---DA----------- 133 (520)
T ss_dssp CEEECCCSSE-EEEEETTEEEEECSSSCCC------CSHHHHHHHHHHHHHHHHHHTTS---CT---TC-----------
T ss_pred cceecccCCc-eEEEECCEEEEecCCCCCC------CCHHHHHHHHHHHHHHHHHHhhc---Cc---CC-----------
Confidence 7654332222 2223345444433221000 00000111223322222211100 00 00
Q ss_pred hhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHhhh----------hcCccceeCCC
Q 008069 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDR----------HFGGINYPVGG 384 (579)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~g~~~p~gG 384 (579)
+........+...++.+++++.+.++.++.++........+.++.+.++......+... .....+++.||
T Consensus 134 ~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG 213 (520)
T 1s3e_A 134 PWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG 213 (520)
T ss_dssp GGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC
T ss_pred CccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC
Confidence 00000112234678999999999999888888776555555677777766543222110 11234689999
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHh
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKL 464 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~ 464 (579)
++.++++|++.+ |++|+++++|++|..+++++. |++.+|+++.||.||+|+++..+ .+++..+.+|....+.+++
T Consensus 214 ~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~l-~~l~~~p~lp~~~~~~i~~ 288 (520)
T 1s3e_A 214 SGQVSERIMDLL---GDRVKLERPVIYIDQTRENVL-VETLNHEMYEAKYVISAIPPTLG-MKIHFNPPLPMMRNQMITR 288 (520)
T ss_dssp THHHHHHHHHHH---GGGEESSCCEEEEECSSSSEE-EEETTSCEEEESEEEECSCGGGG-GGSEEESCCCHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCcEEcCCeeEEEEECCCeEE-EEECCCeEEEeCEEEECCCHHHH-cceeeCCCCCHHHHHHHHh
Confidence 999999998876 889999999999998888877 88899989999999999999875 5666555688877667666
Q ss_pred hccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEecc-chhhhcCCC
Q 008069 465 YVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTIC-SIEDWEGLA 543 (579)
Q Consensus 465 ~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~-~~~~w~~~~ 543 (579)
+.++ +..++++.+++++|+.. .+...++..+ -..+...++ |++..|.++.++..++.. ....|.+++
T Consensus 289 ~~~~-~~~kv~l~~~~~~w~~~-~~~g~~~~~~---~~~~~~~~~-------d~~~~~~~~~~l~~~~~~~~a~~~~~~~ 356 (520)
T 1s3e_A 289 VPLG-SVIKCIVYYKEPFWRKK-DYCGTMIIDG---EEAPVAYTL-------DDTKPEGNYAAIMGFILAHKARKLARLT 356 (520)
T ss_dssp CCBC-CEEEEEEECSSCGGGGG-TEEEEEEECS---TTCSCSEEE-------ECCCTTSCSCEEEEEEETHHHHHHTTSC
T ss_pred CCCc-ceEEEEEEeCCCcccCC-CCCceeeccC---CCCceEEEe-------eCCCCCCCCCEEEEEccchhhhhhhcCC
Confidence 6654 56799999999876432 2222222110 012322211 222223344666666643 234565433
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCC
Q 008069 544 QKDYDAKKELVADEIINRLENKLFPG 569 (579)
Q Consensus 544 ~~~y~~~ke~~~~~il~~le~~~~P~ 569 (579)
++++.+.+++.|+ +++|.
T Consensus 357 -------~~e~~~~vl~~L~-~~~~~ 374 (520)
T 1s3e_A 357 -------KEERLKKLCELYA-KVLGS 374 (520)
T ss_dssp -------HHHHHHHHHHHHH-HHHTC
T ss_pred -------HHHHHHHHHHHHH-HHhCc
Confidence 4678889999999 77764
No 7
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.95 E-value=4.2e-27 Score=251.89 Aligned_cols=326 Identities=17% Similarity=0.271 Sum_probs=214.2
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEe--e-------------------CCeeeccccccc
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE--R-------------------DGYTFDVGSSVM 213 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~--~-------------------~g~~~~~G~~~~ 213 (579)
+..+||+|||||++|+++|..|+++|++|+|+|+++.+||++.++. . .+|.+|.|++++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l 83 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFL 83 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCccee
Confidence 3468999999999999999999999999999999999999999988 2 346667777666
Q ss_pred cCCCCCCChHHHHHHHHHcCCc--eeEeeCCCeEEEEcCCCceEEecCCH-HHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Q 008069 214 FGFSDKGNLNLITQALAAVGCE--MEVIPDPTTVHFHLPNDLSVRVHREY-SDFVAELTSKFPHEKEGVLAFYGECWKIF 290 (579)
Q Consensus 214 ~g~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~p~~~~~i~~f~~~~~~~~ 290 (579)
.. ...+.++++++|+. ++..+... .+.+.+|..+.++.+. +.+...+...+ ++..+.+|+......
T Consensus 84 ~~------~~~l~~ll~~lgl~~~l~~~~~~~--~~~~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~- 152 (433)
T 1d5t_A 84 MA------NGQLVKMLLYTEVTRYLDFKVVEG--SFVYKGGKIYKVPSTETEALASNLMGMF--EKRRFRKFLVFVANF- 152 (433)
T ss_dssp ET------TSHHHHHHHHHTGGGGCCEEECCE--EEEEETTEEEECCCSHHHHHHCSSSCHH--HHHHHHHHHHHHHHC-
T ss_pred ec------cchHHHHHHHcCCccceEEEEeCc--eEEeeCCEEEECCCCHHHHhhCcccChh--hHHHHHHHHHHHHhh-
Confidence 52 23567889999865 23333332 2335677777787774 44333222111 333444454433220
Q ss_pred HHhhhhhhhccchhhHHHhhhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHH--
Q 008069 291 NALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASM-- 368 (579)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-- 368 (579)
.. ..+.. . ....+...++.+++++++.++.++.++........+..+.+.|+.....
T Consensus 153 ------~~---~~p~~-----~-------~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~ 211 (433)
T 1d5t_A 153 ------DE---NDPKT-----F-------EGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRI 211 (433)
T ss_dssp ------CT---TCGGG-----G-------TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHH
T ss_pred ------cc---cCchh-----c-------cccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHH
Confidence 00 00100 0 0112345789999999999999998876542222222333444432211
Q ss_pred -HHhhh---h-cCccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 369 -VLCDR---H-FGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 369 -~~~~~---~-~~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..... + .+.+++|+||++.++++|++.+++.|++|+++++|++|..+++++++|+. +|++++||.||+|++++.
T Consensus 212 ~~~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 212 KLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCCc
Confidence 11111 1 12367999999999999999999999999999999999999999988875 788899999999999875
Q ss_pred HHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCC-CCccceeeccchhhhcCCcceEEEEcCCCCCCCCCC
Q 008069 444 TFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD-TDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAP 522 (579)
Q Consensus 444 ~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP 522 (579)
. .+. .+....+.+.+ ++.+....+ ...|+++++.. .+. ..+.+|++.+| .||+++|
T Consensus 291 ~---~~~-------------~~~~~~~~~~i---l~~~~~~~~~~~~~~i~~~~~--~~~-~~~~~~v~~~s-~d~~~aP 347 (433)
T 1d5t_A 291 D---RVR-------------KAGQVIRIICI---LSHPIKNTNDANSCQIIIPQN--QVN-RKSDIYVCMIS-YAHNVAA 347 (433)
T ss_dssp G---GEE-------------EEEEEEEEEEE---ESSCCTTSTTCSSEEEEECGG--GTT-CSSCEEEEEEE-GGGTSSC
T ss_pred c---ccc-------------ccCcceeEEEE---EcCcccccCCCceEEEEeCcc--ccC-CCCCEEEEEEC-CCCcccC
Confidence 3 221 01112233332 666542111 13455565431 111 22468999999 9999999
Q ss_pred CCeeEEEEEeccch
Q 008069 523 EGHHILHIFTICSI 536 (579)
Q Consensus 523 ~G~~~l~~~~~~~~ 536 (579)
+|+++++++++.+.
T Consensus 348 ~G~~~~~~~~~~p~ 361 (433)
T 1d5t_A 348 QGKYIAIASTTVET 361 (433)
T ss_dssp TTCEEEEEEEECCS
T ss_pred CCCEEEEEEEecCC
Confidence 99999999998763
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.94 E-value=5.7e-25 Score=236.52 Aligned_cols=355 Identities=15% Similarity=0.122 Sum_probs=226.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
++||+|||||++||+||+.|+++|++|+|+|+++.+||++.+...+|+.+|.|++++.. ....+.++++++|+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-----~~~~~~~~~~~~g~~~ 79 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP-----DQTALISLLDELGLKT 79 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT-----TCHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecC-----ccHHHHHHHHHcCCcc
Confidence 58999999999999999999999999999999999999999998899999999998864 2345778899999876
Q ss_pred eEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcChh
Q 008069 237 EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPL 316 (579)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (579)
..........+...+|..+.+......+ .+.....+..++.....+...+.. ..+ .
T Consensus 80 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~ 135 (453)
T 2yg5_A 80 FERYREGESVYISSAGERTRYTGDSFPT-------NETTKKEMDRLIDEMDDLAAQIGA------EEP-----------W 135 (453)
T ss_dssp EECCCCSEEEEECTTSCEEEECSSSCSC-------CHHHHHHHHHHHHHHHHHHHHHCS------SCG-----------G
T ss_pred cccccCCCEEEEeCCCceeeccCCCCCC-------ChhhHHHHHHHHHHHHHHHhhcCC------CCC-----------C
Confidence 4433333323333334444332210000 000011112222222121111100 000 0
Q ss_pred hhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCC-CchHHHHHHHHhhh---------hcCccceeCCChH
Q 008069 317 ECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINAL-QTPMINASMVLCDR---------HFGGINYPVGGVG 386 (579)
Q Consensus 317 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~g~~~p~gG~~ 386 (579)
.......+...++.+++.+++.++.++.++...+....+..+. +.++......+... .....+++.||++
T Consensus 136 ~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~ 215 (453)
T 2yg5_A 136 AHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQ 215 (453)
T ss_dssp GSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTH
T ss_pred CCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChH
Confidence 0001122346789999999999999888877655433345566 66665543222110 0012468999999
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCE-EEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhh
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLY 465 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~-v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~ 465 (579)
.++++|++.+ |++|++|++|++|..++++ +. |++ +|++++||.||+|++++.+ .+++..+.+|...++.++++
T Consensus 216 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~v~-v~~-~~~~~~ad~VI~a~p~~~~-~~l~~~p~lp~~~~~~i~~~ 289 (453)
T 2yg5_A 216 QVSIRMAEAL---GDDVFLNAPVRTVKWNESGATV-LAD-GDIRVEASRVILAVPPNLY-SRISYDPPLPRRQHQMHQHQ 289 (453)
T ss_dssp HHHHHHHHHH---GGGEECSCCEEEEEEETTEEEE-EET-TTEEEEEEEEEECSCGGGG-GGSEEESCCCHHHHHHGGGE
T ss_pred HHHHHHHHhc---CCcEEcCCceEEEEEeCCceEE-EEE-CCeEEEcCEEEEcCCHHHH-hcCEeCCCCCHHHHHHHhcC
Confidence 9999998876 7899999999999998887 55 765 7778999999999999864 56765556888777777777
Q ss_pred ccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCC-eeEEEEEeccc-hhhhcCCC
Q 008069 466 VKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEG-HHILHIFTICS-IEDWEGLA 543 (579)
Q Consensus 466 ~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G-~~~l~~~~~~~-~~~w~~~~ 543 (579)
.++ +..++++.+++++|+.. .....++.+ ..+...++ |++ .|+| +.++.+++... .+.|..+
T Consensus 290 ~~~-~~~kv~l~~~~~~w~~~-~~~g~~~~~-----~~~~~~~~-------~~~-~~~~~~~~l~~~~~~~~~~~~~~~- 353 (453)
T 2yg5_A 290 SLG-LVIKVHAVYETPFWRED-GLSGTGFGA-----SEVVQEVY-------DNT-NHEDDRGTLVAFVSDEKADAMFEL- 353 (453)
T ss_dssp EEC-CEEEEEEEESSCGGGGG-TEEEEEECT-----TSSSCEEE-------ECC-CTTCSSEEEEEEEEHHHHHHHHHS-
T ss_pred CCc-ceEEEEEEECCCCCCCC-CCCceeecC-----CCCeEEEE-------eCC-CCCCCCCEEEEEeccHHHHHHhcC-
Confidence 665 46799999998876432 122222221 12332221 122 3445 45666666432 2334322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCC
Q 008069 544 QKDYDAKKELVADEIINRLENKLFPG 569 (579)
Q Consensus 544 ~~~y~~~ke~~~~~il~~le~~~~P~ 569 (579)
.++++.+.+++.|+ +++|.
T Consensus 354 ------~~~~~~~~~l~~L~-~~~~~ 372 (453)
T 2yg5_A 354 ------SAEERKATILASLA-RYLGP 372 (453)
T ss_dssp ------CHHHHHHHHHHHHH-HHHCG
T ss_pred ------CHHHHHHHHHHHHH-HHhCc
Confidence 24678899999999 77763
No 9
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.94 E-value=4.5e-24 Score=232.27 Aligned_cols=353 Identities=18% Similarity=0.151 Sum_probs=224.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
.+||+|||||++||+||+.|+++|++|+|+|+.+++||++.|+..+|+.+|.|++++.+. ...+.++++++|+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~-----~~~~~~~l~~lgl~~ 113 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWH-----QSHVWREITRYKMHN 113 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTT-----SHHHHHHHHHTTCTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCc-----cHHHHHHHHHcCCcc
Confidence 389999999999999999999999999999999999999999999999999999998752 235778888999843
Q ss_pred eEeeC----CCeEEEEcCC--CceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhh-hhhhccchhhHHHh
Q 008069 237 EVIPD----PTTVHFHLPN--DLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNS-LELKSLEEPIYLFG 309 (579)
Q Consensus 237 ~~~~~----~~~~~~~~~~--g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 309 (579)
+..+. .....+.+.+ +....++. ...... +...+ ..+.. ... .....+..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~-----------~~~~~---~~~~~-~~~~~~~~~~~~~----- 171 (495)
T 2vvm_A 114 ALSPSFNFSRGVNHFQLRTNPTTSTYMTH--EAEDEL-----------LRSAL---HKFTN-VDGTNGRTVLPFP----- 171 (495)
T ss_dssp CEEESCCCSSSCCEEEEESSTTCCEEECH--HHHHHH-----------HHHHH---HHHHC-SSSSTTTTTCSCT-----
T ss_pred eeecccccCCCceEEEecCCCCceeecCH--HHHHHH-----------HHHHH---HHHHc-cchhhhhhcCCCC-----
Confidence 33332 1122222333 33333321 111000 00011 01111 000 000000000
Q ss_pred hhhcChhhhhHHhhhccccHHHHHHHhc--CCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHhh--------hhcCccc
Q 008069 310 QFFKRPLECLTLAYYLPQNAGNIARKYI--KDPQLLSFIDAECFIVSTINALQTPMINASMVLCD--------RHFGGIN 379 (579)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~~~l~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~ 379 (579)
+. +........+...++.++++++. .++.++.++...+....+..+.+.++......+.. ....+.+
T Consensus 172 --~~-~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (495)
T 2vvm_A 172 --HD-MFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSY 248 (495)
T ss_dssp --TS-TTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSE
T ss_pred --CC-cccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceE
Confidence 00 00001122344668899998886 67777777777666666666777666543322111 0112466
Q ss_pred eeCCChHHHHHHHHHHHHHcC-ceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHH
Q 008069 380 YPVGGVGGIAKSLAKGLADKG-SEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEE 458 (579)
Q Consensus 380 ~p~gG~~~l~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~ 458 (579)
++.||++.++++|.+.+++.| ++|+++++|++|..+++++. |++.+|++++||.||+|+|+..+ ..++..+.+|...
T Consensus 249 ~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vI~a~~~~~l-~~i~~~p~lp~~~ 326 (495)
T 2vvm_A 249 KFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAAR-VTARDGREFVAKRVVCTIPLNVL-STIQFSPALSTER 326 (495)
T ss_dssp EETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEE-EEETTCCEEEEEEEEECCCGGGG-GGSEEESCCCHHH
T ss_pred EeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEE-EEECCCCEEEcCEEEECCCHHHH-hheeeCCCCCHHH
Confidence 789999999999999999999 99999999999998877765 88888988999999999999876 4565445688877
Q ss_pred HHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEeccchhh
Q 008069 459 ENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIED 538 (579)
Q Consensus 459 ~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~~~~~ 538 (579)
.+.++.+.+.+ ..+|++.++++.|. .+..+..+ +.+...++-. ...|.|..++..++... ..
T Consensus 327 ~~ai~~~~~~~-~~kv~l~~~~~~~~---~~~g~~~~------~~~~~~~~~~-------~~~~~~~~vl~~~~~~~-~~ 388 (495)
T 2vvm_A 327 ISAMQAGHVSM-CTKVHAEVDNKDMR---SWTGIAYP------FNKLCYAIGD-------GTTPAGNTHLVCFGNSA-NH 388 (495)
T ss_dssp HHHHHHCCCCC-CEEEEEEESCGGGG---GEEEEECS------SCSSCEEEEE-------EECTTSCEEEEEEECST-TC
T ss_pred HHHHHhcCCCc-eeEEEEEECCccCC---CceeEecC------CCCcEEEecC-------CCCCCCCeEEEEEeCcc-cc
Confidence 77777776554 56999999987652 12222221 1233333321 12466777777665422 11
Q ss_pred hcCCChhhHHHHHHHHHHHHHHHHHHhhCCCC
Q 008069 539 WEGLAQKDYDAKKELVADEIINRLENKLFPGL 570 (579)
Q Consensus 539 w~~~~~~~y~~~ke~~~~~il~~le~~~~P~l 570 (579)
+ .. ++..+.+++.|+ +++|+.
T Consensus 389 ~---~~-------~e~~~~~~~~L~-~~~~~~ 409 (495)
T 2vvm_A 389 I---QP-------DEDVRETLKAVG-QLAPGT 409 (495)
T ss_dssp C---CT-------TTCHHHHHHHHH-TTSTTS
T ss_pred C---CC-------HHHHHHHHHHHH-HhcCCC
Confidence 2 11 233467788998 788874
No 10
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.94 E-value=6e-25 Score=236.98 Aligned_cols=362 Identities=16% Similarity=0.185 Sum_probs=224.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcC------CcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHH
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG------ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALA 230 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g------~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~ 230 (579)
.+||+|||||++||+||+.|+++| ++|+|||+.+.+||++.+...+|+.+|.|++.+.+.. ..+.++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~-----~~~~~l~~ 79 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERK-----KSAPQLVK 79 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTC-----THHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCC-----HHHHHHHH
Confidence 589999999999999999999999 9999999999999999999999999999999887532 34778999
Q ss_pred HcCCceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhh
Q 008069 231 AVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQ 310 (579)
Q Consensus 231 ~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (579)
++|+............+.+.++....++.+... ..|.. +..+... ...... ........
T Consensus 80 ~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~p~~---~~~~~~~--~~~~~~---------~~~~~~~~ 138 (470)
T 3i6d_A 80 DLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVM-------GIPTK---IAPFVST--GLFSLS---------GKARAAMD 138 (470)
T ss_dssp HTTCCTTEEECCCCCEEEECSSCEEECCC---------------------------------C---------CSHHHHHH
T ss_pred HcCCcceeecCCCCccEEEECCEEEECCCCccc-------CCcCc---hHHhhcc--CcCCHH---------HHHHHhcC
Confidence 999876554332223333445555444432100 00000 0000000 000000 00000000
Q ss_pred hhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHh----------h--------
Q 008069 311 FFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC----------D-------- 372 (579)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~-------- 372 (579)
.+... .......++.+++++.+..+....++...+....+.++.+.++......+. .
T Consensus 139 ~~~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (470)
T 3i6d_A 139 FILPA-----SKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQ 213 (470)
T ss_dssp HHSCC-----CSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC------------------
T ss_pred cccCC-----CCCCCCcCHHHHHHHhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccc
Confidence 00000 001234577888888777666666665555444445555544332110000 0
Q ss_pred --------hhcCccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 373 --------RHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 373 --------~~~~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
...+.++++.||++.++++|++.+.+ ++|+++++|++|..+++++. |++.+|++++||.||+|++++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~-v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 214 GSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYS-LELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp -------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECSSSEE-EEESSSCEEEESEEEECSCHHHH
T ss_pred cccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEE-EEECCCCEEECCEEEECCCHHHH
Confidence 00125668899999999999988754 79999999999999887765 88899988999999999999876
Q ss_pred HhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCC
Q 008069 445 FGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEG 524 (579)
Q Consensus 445 ~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G 524 (579)
.+++.+. + ....++.+.+.+ ..++++.++++.|+.+.....++++.+ .+....-+...+...|..+|+|
T Consensus 291 -~~l~~~~--~--~~~~~~~~~~~~-~~~v~l~~~~~~~~~~~~~~g~l~~~~-----~~~~~~~~~~~s~~~~~~~p~~ 359 (470)
T 3i6d_A 291 -AGMLSEL--P--AISHLKNMHSTS-VANVALGFPEGSVQMEHEGTGFVISRN-----SDFAITACTWTNKKWPHAAPEG 359 (470)
T ss_dssp -HHHTTTS--T--THHHHHTCEEEE-EEEEEEEESSTTCCCSSCSSEEEECST-----TCCSEEEEEEHHHHCGGGSCTT
T ss_pred -HHHcCCc--h--hhHHHhcCCCCc-eEEEEEEECchhcCCCCCCeEEEccCC-----CCCCceEEEEEcCcCCCcCCCC
Confidence 4677653 2 234556665544 679999999988765433334444431 1111122333444556778889
Q ss_pred eeEEEEEeccch-hhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008069 525 HHILHIFTICSI-EDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK 571 (579)
Q Consensus 525 ~~~l~~~~~~~~-~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~l~ 571 (579)
+.++.+++.... ..|... ..+++.+.+++.|+ +++|...
T Consensus 360 ~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~-~~~g~~~ 399 (470)
T 3i6d_A 360 KTLLRAYVGKAGDESIVDL-------SDNDIINIVLEDLK-KVMNING 399 (470)
T ss_dssp CEEEEEEECCSSCCGGGTS-------CHHHHHHHHHHHHG-GGSCCCS
T ss_pred CEEEEEEECCCCCccccCC-------CHHHHHHHHHHHHH-HHhCCCC
Confidence 888888764322 123222 23688999999999 8887543
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.93 E-value=5.3e-25 Score=240.07 Aligned_cols=362 Identities=14% Similarity=0.118 Sum_probs=230.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCc
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE 235 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~ 235 (579)
..+||+|||||++||++|+.|+++|++|+|+|+.+.+||++.++..+|+.+|.|++++.+ ....+.++++++|+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-----~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE-----SEGDVTFLIDSLGLR 86 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC-----CSHHHHHHHHHTTCG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCccccc-----CcHHHHHHHHHcCCc
Confidence 358999999999999999999999999999999999999999999999999999999874 234578899999987
Q ss_pred eeEee-CCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcC
Q 008069 236 MEVIP-DPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (579)
Q Consensus 236 ~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (579)
..... ......+.+.+|..+.++.+...+... .+......+... ...+. ... . .
T Consensus 87 ~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~---~~~~~~~~~~~~-------~~~~~---~~~-~-----------~ 141 (504)
T 1sez_A 87 EKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKS---NFLSTGSKLQML-------LEPIL---WKN-K-----------K 141 (504)
T ss_dssp GGEECCSSCCCEEEESSSSEEECCSSHHHHHHS---SSSCHHHHHHHH-------THHHH---C----------------
T ss_pred ccceeccCCCceEEEECCeEEECCCCHHHHhcc---ccCCHHHHHHHh-------Hhhhc---cCc-c-----------c
Confidence 55432 222334556677777776665443321 000000001000 00000 000 0 0
Q ss_pred hhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHH--H-H------------Hhhh------
Q 008069 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS--M-V------------LCDR------ 373 (579)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~-~------------~~~~------ 373 (579)
.. . ......++.+++++.+.++.++.++...+....+.++.+.++.... + . +...
T Consensus 142 ~~-~---~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (504)
T 1sez_A 142 LS-Q---VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNE 217 (504)
T ss_dssp ----------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----
T ss_pred cc-c---cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 00 0 0112468899999888888877777765554444556555432210 0 0 0000
Q ss_pred -------------hcCccceeCCChHHHHHHHHHHHHHcC-ceEEeCceeeEEEEeCCE-----EEEEEeC--CC---cE
Q 008069 374 -------------HFGGINYPVGGVGGIAKSLAKGLADKG-SEILYKANVTKVILEQGK-----AVGVRLS--DG---RE 429 (579)
Q Consensus 374 -------------~~~g~~~p~gG~~~l~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~-----v~gV~~~--dG---~~ 429 (579)
...+.++++||++.++++|++.+ | ++|++|++|++|..++++ .+.|++. +| ++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~ 294 (504)
T 1sez_A 218 KKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDL---REDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEE 294 (504)
T ss_dssp ------CCCSCCSTTCSCBEETTCTHHHHHHHHTTS---CTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCC
T ss_pred ccccccchhhccccCCceEeeCcHHHHHHHHHHhhc---ccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCcccee
Confidence 01247789999999999998765 4 789999999999988776 1346554 45 57
Q ss_pred EEcCEEEECCChhHHHhhccCC---CCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcc
Q 008069 430 FYAKTIISNATRWDTFGKLLKG---EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYG 506 (579)
Q Consensus 430 i~Ad~VV~a~~~~~~~~~Ll~~---~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 506 (579)
++||.||+|+++..+. +++.+ ..+++.. +..+.+. +..+|+++++++.|+.+...+++++++ ++.. ....
T Consensus 295 ~~ad~VI~a~p~~~l~-~ll~~~~~~~~~~~~---l~~~~~~-~~~~v~l~~~~~~~~~~~~~~~~l~~~-~~~~-~g~~ 367 (504)
T 1sez_A 295 ESFDAVIMTAPLCDVK-SMKIAKRGNPFLLNF---IPEVDYV-PLSVVITTFKRENVKYPLEGFGVLVPS-KEQQ-HGLK 367 (504)
T ss_dssp CEESEEEECSCHHHHH-TSEEESSSSBCCCTT---SCCCCEE-EEEEEEEEEEGGGBSSCCCSSEEECCG-GGGG-GTCC
T ss_pred EECCEEEECCCHHHHH-HHhhcccCCcccHHH---HhcCCCC-ceEEEEEEEchhhcCCCCCceEEEcCC-CCCC-CCCc
Confidence 8999999999998875 56521 1233221 2333333 567999999998876554445555543 2211 0111
Q ss_pred eEEEEcCCCCCCCCCCCCeeEEEEEeccch-hhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCC
Q 008069 507 SIFLSIPTVLDSSLAPEGHHILHIFTICSI-EDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569 (579)
Q Consensus 507 ~i~~~~~s~~dp~~aP~G~~~l~~~~~~~~-~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~ 569 (579)
..-+.+++..+|..+|+|++++++++.... ..|..+ ..+++.+.+++.|+ +++|.
T Consensus 368 ~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~-------~~ee~~~~v~~~L~-~~~g~ 423 (504)
T 1sez_A 368 TLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKA-------SRTELKEIVTSDLK-QLLGA 423 (504)
T ss_dssp SSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTC-------CHHHHHHHHHHHHH-HHHCB
T ss_pred cceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCC-------CHHHHHHHHHHHHH-HHhCC
Confidence 111233456678888999988888775432 234333 23678899999999 77764
No 12
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.93 E-value=8.3e-28 Score=258.39 Aligned_cols=177 Identities=18% Similarity=0.138 Sum_probs=150.4
Q ss_pred hhccccccccccCCC-CCcccccccccccccccccccccccccccccCCccccccccccCCCCCCC-----CCCCCCCCc
Q 008069 42 VQSFGQRDAMQLGSS-SKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSS-----NFNGSTLRS 115 (579)
Q Consensus 42 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 115 (579)
...|++++|++||+| ++|++|+|++.||+||+||.|+++.. +++|.+|..+.+++|++| +||++++||
T Consensus 7 ~~~~~~~~~~~~a~rc~~c~~~~C~~~CP~~~~i~~~~~~~~------~g~~~~A~~~~~~~n~~p~~~grvCp~~~~Ce 80 (456)
T 2vdc_G 7 YARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTS------EGRLEEAYEVSQATNNFPEICGRICPQDRLCE 80 (456)
T ss_dssp CSSCCCTTHHHHHHHSCCCSSCHHHHTSTTCCCHHHHHHHHH------HTCHHHHHHHHHHHCSCHHHHHHHCCGGGSGG
T ss_pred hccCCHHHHHHHHHhhhcCCCchhhcCCCCCCcHHHHHHHHH------CCCHHHHHHHHHhhCCCCccccccCCCCcchH
Confidence 468999999999999 99999999999999999999999999 999999999999999999 999999999
Q ss_pred cccccccccccchhhhhccccccccceeecCCCcCCCCCCCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcc
Q 008069 116 EDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGS 195 (579)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~ 195 (579)
++|+++.....+++|..+++++.+.++..+|..+........+||+|||||++||++|..|++.|++|+|||+.+.+||.
T Consensus 81 ~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~ 160 (456)
T 2vdc_G 81 GNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL 160 (456)
T ss_dssp GGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH
T ss_pred HhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe
Confidence 99999865468999999999999888877887654333446789999999999999999999999999999999999997
Q ss_pred eeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 196 SGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 196 ~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
.. +.++++.++ +.......+.+++.|+++
T Consensus 161 l~-~gip~~~~~-----------~~~~~~~~~~l~~~gv~~ 189 (456)
T 2vdc_G 161 LV-YGIPGFKLE-----------KSVVERRVKLLADAGVIY 189 (456)
T ss_dssp HH-HTSCTTTSC-----------HHHHHHHHHHHHHTTCEE
T ss_pred ee-ecCCCccCC-----------HHHHHHHHHHHHHCCcEE
Confidence 54 334443221 112334556777888754
No 13
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.92 E-value=3.2e-24 Score=232.18 Aligned_cols=358 Identities=15% Similarity=0.117 Sum_probs=218.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC--cEEEEecCCCCCcceeEEee-CCeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~~~gg~~~t~~~-~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
+||+|||||++||+||++|+++|+ +|+|||+.+++||++.+... +|+.+|.|++.+.... .....+.++++++|+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~--~~~~~~~~l~~~lgl 80 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAG--ALGARTLLLVSELGL 80 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCH--HHHHHHHHHHHHTTC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCC--cccHHHHHHHHHcCC
Confidence 799999999999999999999999 99999999999999998775 5999999999875311 013457789999998
Q ss_pred ceeEeeCC-----CeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHh
Q 008069 235 EMEVIPDP-----TTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFG 309 (579)
Q Consensus 235 ~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (579)
..+..+.. ....+.+.+|....++.+...+...+ .+........ .+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~---~~~~~~~~~~-------------------------~~~ 132 (477)
T 3nks_A 81 DSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPS---PPFSKPLFWA-------------------------GLR 132 (477)
T ss_dssp GGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CC---TTSCSCSSHH-------------------------HHT
T ss_pred cceeeecCCCCchhcceEEEECCEEEECCCChhhccccc---chhhhHHHHH-------------------------HHH
Confidence 75444311 01123334555555544322111100 0000000000 000
Q ss_pred hhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHh------------------
Q 008069 310 QFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC------------------ 371 (579)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 371 (579)
.+.... ......++.+++++.+..+....++........+..+.+.++....-.+.
T Consensus 133 ~~~~~~------~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~ 206 (477)
T 3nks_A 133 ELTKPR------GKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAG 206 (477)
T ss_dssp TTTSCC------CCSSCCBHHHHHHHHHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC--
T ss_pred hhhcCC------CCCCCcCHHHHHHHhhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcc
Confidence 000000 01123466777776666555555555544444455555554432210000
Q ss_pred -------------hhhcCccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEEC
Q 008069 372 -------------DRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISN 438 (579)
Q Consensus 372 -------------~~~~~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a 438 (579)
.....+.++++||++.++++|++.+++.|++|+++++|++|..++++++.|.+ +|.++.||.||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a 285 (477)
T 3nks_A 207 RTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISA 285 (477)
T ss_dssp ---CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEEC
T ss_pred cccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEEC
Confidence 00112567899999999999999999999999999999999987766345766 5557999999999
Q ss_pred CChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCC
Q 008069 439 ATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDS 518 (579)
Q Consensus 439 ~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp 518 (579)
++++.+ .+|+++ .++...+.+..+.+. +..++++.++++.|+.+ . ..++++.. .+...+.+.+.|...|
T Consensus 286 ~p~~~~-~~ll~~--~~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~-~-~g~l~~~~-----~~~~~~~~~~~s~~~~ 354 (477)
T 3nks_A 286 IPASVL-SELLPA--EAAPLARALSAITAV-SVAVVNLQYQGAHLPVQ-G-FGHLVPSS-----EDPGVLGIVYDSVAFP 354 (477)
T ss_dssp SCHHHH-HHHSCG--GGHHHHHHHHTCCEE-EEEEEEEEETTCCCSSC-S-SEEECCTT-----TCSSEEEEECHHHHCG
T ss_pred CCHHHH-HHhccc--cCHHHHHHHhcCCCC-cEEEEEEEECCCCCCCC-C-ceEEccCC-----CCCCceEEEEeccccC
Confidence 999876 467764 344455556665554 45689999999876532 2 23343321 1111222334444445
Q ss_pred CCC-CCCeeEEEEEeccc-hhhhcCCChhhHHHHHHHHHHHHHHHHHHhhC
Q 008069 519 SLA-PEGHHILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLF 567 (579)
Q Consensus 519 ~~a-P~G~~~l~~~~~~~-~~~w~~~~~~~y~~~ke~~~~~il~~le~~~~ 567 (579)
... |+|..++++++... ...|.+ +.++...+++.+.+++.|+ +++
T Consensus 355 ~~~~~~~~~~l~~~~gg~~~~~~~~---~~~~~~~~~~~~~~~~~L~-~~~ 401 (477)
T 3nks_A 355 EQDGSPPGLRVTVMLGGSWLQTLEA---SGCVLSQELFQQRAQEAAA-TQL 401 (477)
T ss_dssp GGSTTTTCEEEEEEECHHHHHHHHH---SSCCCCHHHHHHHHHHHHH-HHH
T ss_pred CCCCCCCceEEEEEECCcccccccc---ccCCCCHHHHHHHHHHHHH-HHh
Confidence 433 44888888877532 122211 0111245788999999999 665
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.92 E-value=2e-24 Score=235.80 Aligned_cols=279 Identities=20% Similarity=0.206 Sum_probs=160.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHH-cCCcEEEEecCCCCCcceeEE-eeCCeeeccccccccCCCCCCChHHHHHHHHHc
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAV-KGARVLVLEKYVIPGGSSGYY-ERDGYTFDVGSSVMFGFSDKGNLNLITQALAAV 232 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~-~g~~v~~~e~~~~~gg~~~t~-~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~ 232 (579)
+..+||+|||||++||+||++|++ .|++|+|||+++++||++.|+ ..+||.+|.|+|+++.. ...+.+++.++
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~-----~~~v~~l~~e~ 82 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH-----YKYFDDCLDEA 82 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCC-----BHHHHHHHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCC-----CHHHHHHHHHh
Confidence 346999999999999999999998 499999999999999999886 56899999999999752 34567888887
Q ss_pred CCce-eEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhh
Q 008069 233 GCEM-EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQF 311 (579)
Q Consensus 233 g~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (579)
+... ......... +.+.+|..+..+-... + ...+ .......... ..........
T Consensus 83 ~~~~~~~~~~~~~~-~i~~~g~~~~~p~~~~-----~-~~~~--~~~~~~~~~~---~~~~~~~~~~------------- 137 (513)
T 4gde_A 83 LPKEDDWYTHQRIS-YVRCQGQWVPYPFQNN-----I-SMLP--KEEQVKCIDG---MIDAALEARV------------- 137 (513)
T ss_dssp SCSGGGEEEEECCE-EEEETTEEEESSGGGG-----G-GGSC--HHHHHHHHHH---HHHHHHHHHT-------------
T ss_pred CCccceeEEecCce-EEEECCeEeecchhhh-----h-hhcc--hhhHHHHHHH---HHHHHHhhhc-------------
Confidence 6532 222211111 1223454444331100 0 0000 0000011100 0000000000
Q ss_pred hcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHH------------HHHHHhhhh-----
Q 008069 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMIN------------ASMVLCDRH----- 374 (579)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~----- 374 (579)
......++.+++.+.+.......++........+..+.+.++.+ .........
T Consensus 138 ----------~~~~~~s~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (513)
T 4gde_A 138 ----------ANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNW 207 (513)
T ss_dssp ----------CCSCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSC
T ss_pred ----------ccccccCHHHHHHHhhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhccccccc
Confidence 00011233333333332222222222211111112222211110 000000000
Q ss_pred --cC-ccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCC
Q 008069 375 --FG-GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 375 --~~-g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~ 451 (579)
.. ..+.++||++.++++|++.+++.|++|+++++|++|..++++ |++.+|+++.||.||+|+++..+. +++.+
T Consensus 208 ~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~~~G~~~~ad~vI~t~P~~~l~-~~l~~ 283 (513)
T 4gde_A 208 GPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTLQDGTTIGYKKLVSTMAVDFLA-EAMND 283 (513)
T ss_dssp BTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEETTSCEEEEEEEEECSCHHHHH-HHTTC
T ss_pred ccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEEcCCCEEECCEEEECCCHHHHH-HhcCc
Confidence 01 123458999999999999999999999999999999988775 457899999999999999987765 56653
Q ss_pred CCCChHHHHHHHhhccCCCeEEEEEeecCCc
Q 008069 452 EQLPKEEENFQKLYVKAPSFLSIHMGVKAEV 482 (579)
Q Consensus 452 ~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~ 482 (579)
.........+.+ .+..+|+++++...
T Consensus 284 ----~~~~~~~~~l~y-~~~~~v~l~~~~~~ 309 (513)
T 4gde_A 284 ----QELVGLTKQLFY-SSTHVIGVGVRGSR 309 (513)
T ss_dssp ----HHHHHHHTTCCE-EEEEEEEEEEESSC
T ss_pred ----hhhHhhhhcccC-CceEEEEEEEeccc
Confidence 233334444444 35668899998765
No 15
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.91 E-value=8.2e-23 Score=221.09 Aligned_cols=351 Identities=18% Similarity=0.184 Sum_probs=219.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcC--CcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g--~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
.+||+|||||++||++|+.|+++| ++|+|+|+.+.+||++.+...+|+.+|.|++.+... ...+.++++++|+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-----~~~~~~l~~~lg~ 78 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVAR-----KHILTDLIEAIGL 78 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETT-----STHHHHHHHHTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcc-----cHHHHHHHHHcCC
Confidence 489999999999999999999999 999999999999999999999999999999988753 3357899999998
Q ss_pred ceeEeeCCCeEEEEcCCCceEEecCC--------HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhH
Q 008069 235 EMEVIPDPTTVHFHLPNDLSVRVHRE--------YSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIY 306 (579)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~ 306 (579)
............+.+.+|....++.. ...+.. ... .... .++ . ..+.... ..
T Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~---~~~-~~~~--~~~--~---~~~~~~~-----~~---- 138 (475)
T 3lov_A 79 GEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQ---TTL-LTEE--EKQ--E---VADLLLH-----PS---- 138 (475)
T ss_dssp GGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTT---CSS-SCHH--HHH--H---HHHHHHS-----CC----
T ss_pred cceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhh---ccC-CChh--HHH--H---hhCcccC-----Cc----
Confidence 86655432222333344544443322 111110 000 0000 000 0 0000000 00
Q ss_pred HHhhhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHH------------HHHh--h
Q 008069 307 LFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS------------MVLC--D 372 (579)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------------~~~~--~ 372 (579)
.. ........++.+++.+.+..+....++...+....+..+.+.++.... +... .
T Consensus 139 -------~~----~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~ 207 (475)
T 3lov_A 139 -------DS----LRIPEQDIPLGEYLRPRLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRL 207 (475)
T ss_dssp -------TT----CCCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHH
T ss_pred -------cc----ccCCCCCcCHHHHHHHHhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 00 000112456777777776666666666555444444555444322100 0000 0
Q ss_pred -h--------------hcCccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEE
Q 008069 373 -R--------------HFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIIS 437 (579)
Q Consensus 373 -~--------------~~~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~ 437 (579)
. ....+++++||++.++++|++.+.+ ++|+++++|++|..+++++. |++.+| ++.||.||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~-v~~~~g-~~~ad~vV~ 283 (475)
T 3lov_A 208 MRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISREDGRYR-LKTDHG-PEYADYVLL 283 (475)
T ss_dssp TCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEETTEEE-EECTTC-CEEESEEEE
T ss_pred hcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCEEE-EEECCC-eEECCEEEE
Confidence 0 0234678999999999999988854 79999999999999888876 888888 799999999
Q ss_pred CCChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCC
Q 008069 438 NATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLD 517 (579)
Q Consensus 438 a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~d 517 (579)
|++++.+ .+|+++..+ ..+..+.+. +..++++.+++++ +.+.....++++.+ .+.....+..++...
T Consensus 284 a~p~~~~-~~ll~~~~~-----~~~~~~~~~-~~~~v~l~~~~~~-~~~~~g~g~l~~~~-----~~~~~~~~~~~s~~~ 350 (475)
T 3lov_A 284 TIPHPQV-VQLLPDAHL-----PELEQLTTH-STATVTMIFDQQQ-SLPIEGTGFVVNRR-----APYSITACTAIDQKW 350 (475)
T ss_dssp CSCHHHH-HHHCTTSCC-----HHHHTCCEE-EEEEEEEEEECCS-SCSSSSSEEEECTT-----SSCSEEEEEEHHHHC
T ss_pred CCCHHHH-HHHcCccCH-----HHHhcCCCC-eEEEEEEEECCcC-CCCCCCEEEEecCC-----CCCceEEEEEEcccC
Confidence 9999876 467765322 345555544 4668999999876 33332233444321 122222344555566
Q ss_pred CCCCCCCeeEEEEEeccch-hhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCC
Q 008069 518 SSLAPEGHHILHIFTICSI-EDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569 (579)
Q Consensus 518 p~~aP~G~~~l~~~~~~~~-~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~ 569 (579)
|...|+ +.++.+++.... ..|..+ ..+++.+.+++.|+ ++++.
T Consensus 351 ~~~~p~-~~~l~~~~~~~~~~~~~~~-------~~e~~~~~~~~~L~-~~~g~ 394 (475)
T 3lov_A 351 NHSAPD-HTVLRAFVGRPGNDHLVHE-------SDEVLQQAVLQDLE-KICGR 394 (475)
T ss_dssp TTTCTT-EEEEEEEECBTTBCGGGGS-------CHHHHHHHHHHHHH-HHHSS
T ss_pred CCCCCC-cEEEEEEeCCCCCCcccCC-------CHHHHHHHHHHHHH-HHhCC
Confidence 777786 777777664322 222222 23678899999999 77753
No 16
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.90 E-value=3.7e-22 Score=216.77 Aligned_cols=353 Identities=15% Similarity=0.153 Sum_probs=201.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEee-----------------CCeeeccccccccCCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-----------------DGYTFDVGSSVMFGFSD 218 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~-----------------~g~~~~~G~~~~~g~~~ 218 (579)
..+||+|||||++||+||+.|+++|++|+|||+.+.+||++.++.. +|+.++.|++.+...
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-- 87 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQS-- 87 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETT--
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccH--
Confidence 4689999999999999999999999999999999999999888764 577889998887641
Q ss_pred CCChHHHHHHHHHcCCceeEeeCCCe-EEEE-cCC----CceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Q 008069 219 KGNLNLITQALAAVGCEMEVIPDPTT-VHFH-LPN----DLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNA 292 (579)
Q Consensus 219 ~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~-~~~----g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~ 292 (579)
. .+.++++++|+.+........ ..+. ..+ |..+.++..... ++.....+...
T Consensus 88 ---~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~l~~~ 145 (489)
T 2jae_A 88 ---H-ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTYRAAKAD------------------TFGYMSELLKK 145 (489)
T ss_dssp ---S-THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEHHHHHHH------------------HHHHHHHHHHH
T ss_pred ---H-HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccHHHHhhh------------------hhccHHHHHHH
Confidence 1 577899999998765432211 1122 222 333332111111 10000000000
Q ss_pred hhhhhhhccchhhHHHhhhhcChhhhhHHhhhccccHHHHHHHhcC--------CHHHHHHHhhhh-h-hhhc-CCCCCc
Q 008069 293 LNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIK--------DPQLLSFIDAEC-F-IVST-INALQT 361 (579)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~--------~~~l~~~l~~~~-~-~~~~-~~~~~~ 361 (579)
.... ..+..+ . .+.+ ..++.+++.++.. ...+..++.... . ..+. ..+.+.
T Consensus 146 ~~~~--~~~~~~-------~-~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (489)
T 2jae_A 146 ATDQ--GALDQV-------L-SRED--------KDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAM 207 (489)
T ss_dssp HHHH--TTTTTT-------S-CHHH--------HHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCH
T ss_pred HHhc--cccccc-------c-chhh--------HHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCH
Confidence 0000 000000 0 0000 0112222222100 000000000000 0 0000 001111
Q ss_pred hHHHHHHHH-------hhhhcCccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCC---cEEE
Q 008069 362 PMINASMVL-------CDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG---REFY 431 (579)
Q Consensus 362 ~~~~~~~~~-------~~~~~~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG---~~i~ 431 (579)
......... ......++++++||++.++++|++.+.+ ++|+++++|++|..+++++. |++.+| ++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~~~~ 284 (489)
T 2jae_A 208 QEVIRSGIGRNFSFDFGYDQAMMMFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVT-VEYTAGGSKKSIT 284 (489)
T ss_dssp HHHHHHTTTTTGGGGGCTTTSSSEEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEETTEEE-EEEEETTEEEEEE
T ss_pred HHHhhhhHHHHHhhhhccccCccEEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEE-EEEecCCeEEEEE
Confidence 111111000 0011245778999999999999998843 78999999999999988877 777776 5799
Q ss_pred cCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCcc-ceeeccchhhhcCCcceEEE
Q 008069 432 AKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCH-HFVLEDDWNRLEEPYGSIFL 510 (579)
Q Consensus 432 Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~i~~ 510 (579)
||.||+|+++..+ ..++. .+|+..++.++++.++ +.++|++++++++|+.+.... .+... ..|. .++
T Consensus 285 ad~vI~a~p~~~l-~~l~~--~l~~~~~~~l~~~~~~-~~~kv~l~~~~~~w~~~~~~~g~~~~~------~~~~--~~~ 352 (489)
T 2jae_A 285 ADYAICTIPPHLV-GRLQN--NLPGDVLTALKAAKPS-SSGKLGIEYSRRWWETEDRIYGGASNT------DKDI--SQI 352 (489)
T ss_dssp ESEEEECSCHHHH-TTSEE--CCCHHHHHHHHTEECC-CEEEEEEEESSCHHHHTTCCCSCEEEE------SSTT--CEE
T ss_pred CCEEEECCCHHHH-HhCcc--CCCHHHHHHHHhCCCc-cceEEEEEeCCCCccCCCCcccccccC------CCCc--eEE
Confidence 9999999998754 56654 5888888888888776 467999999998775432222 12211 1222 345
Q ss_pred EcCCCCCCCCCCCCeeEEEEEec-cchhhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCC-CCCCeEE
Q 008069 511 SIPTVLDSSLAPEGHHILHIFTI-CSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG-LKQSIAF 576 (579)
Q Consensus 511 ~~~s~~dp~~aP~G~~~l~~~~~-~~~~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~-l~~~I~~ 576 (579)
..++..++ .|+ ..++..++. .....|..++ ++++.+.+++.|+ +++|+ +++.++.
T Consensus 353 ~~~s~~~~--~~~-~~l~~~~~~g~~~~~~~~~~-------~~~~~~~~l~~L~-~~~~~~~~~~~~~ 409 (489)
T 2jae_A 353 MFPYDHYN--SDR-GVVVAYYSSGKRQEAFESLT-------HRQRLAKAIAEGS-EIHGEKYTRDISS 409 (489)
T ss_dssp ECCSSSTT--SSC-EEEEEEEEETHHHHHHHTSC-------HHHHHHHHHHHHH-HHHCGGGGSSEEE
T ss_pred EeCCCCCC--CCC-CEEEEEeeCCchhhhhhcCC-------HHHHHHHHHHHHH-HHcCcchhhhccc
Confidence 55665443 232 333333433 2333454432 4678999999999 78888 7766653
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.89 E-value=8.1e-22 Score=213.77 Aligned_cols=349 Identities=16% Similarity=0.186 Sum_probs=208.0
Q ss_pred CCCCccEEEECCChhHHHHHHHHHHcC-CcEEEEecCCCCCcceeEE-eeCCeeeccccccccCCCCCCChHHHHHHHHH
Q 008069 154 GADDYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYVIPGGSSGYY-ERDGYTFDVGSSVMFGFSDKGNLNLITQALAA 231 (579)
Q Consensus 154 ~~~~~~v~viG~g~~g~~~a~~l~~~g-~~v~~~e~~~~~gg~~~t~-~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~ 231 (579)
....+||+|||||++||++|+.|+++| .+|+|+|+.+.+||.+.++ ..+|+.+|.|++.+.. ....+.+++++
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~-----~~~~~~~l~~~ 80 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS-----HYQYFDDVMDW 80 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC-----SBHHHHHHHHH
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc-----ChHHHHHHHHH
Confidence 345689999999999999999999998 7999999999999999985 6889999999999864 23456677777
Q ss_pred cCCceeEeeCCCeEEEEcCCCceEEec-CCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhh
Q 008069 232 VGCEMEVIPDPTTVHFHLPNDLSVRVH-REYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQ 310 (579)
Q Consensus 232 ~g~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (579)
++.++....... +.+.+|..+.++ .... ..++.. ... ... ..+...... .
T Consensus 81 ~~~~~~~~~~~~---~~~~~g~~~~~P~~~~~-------~~l~~~-~~~-~~~---~~ll~~~~~----~---------- 131 (484)
T 4dsg_A 81 AVQGWNVLQRES---WVWVRGRWVPYPFQNNI-------HRLPEQ-DRK-RCL---DELVRSHAR----T---------- 131 (484)
T ss_dssp HCSCEEEEECCC---EEEETTEEEESSGGGCG-------GGSCHH-HHH-HHH---HHHHHHHHC----C----------
T ss_pred HhhhhhhccCce---EEEECCEEEEeCccchh-------hhCCHH-HHH-HHH---HHHHHHHhc----c----------
Confidence 653332222211 222345555544 1110 011110 000 000 001000000 0
Q ss_pred hhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchH-----------HHHHH-HHhhh-----
Q 008069 311 FFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPM-----------INASM-VLCDR----- 373 (579)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~----- 373 (579)
......++.+++.+.+.......++........+.++.+.++ ..... .....
T Consensus 132 -----------~~~~~~s~~e~~~~~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~ 200 (484)
T 4dsg_A 132 -----------YTEPPNNFEESFTRQFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLG 200 (484)
T ss_dssp -----------CSSCCSSHHHHHHHHHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCC
T ss_pred -----------CCCCCCCHHHHHHHHhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccC
Confidence 000123445555444332222222222111111222222211 10000 00000
Q ss_pred --hcCccceeC-CChHHHHHHHHHHHHHcCceEEeC--ceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhc
Q 008069 374 --HFGGINYPV-GGVGGIAKSLAKGLADKGSEILYK--ANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL 448 (579)
Q Consensus 374 --~~~g~~~p~-gG~~~l~~aL~~~l~~~G~~I~l~--~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~L 448 (579)
..+.+.||. ||++.++++|++.+.+. +|+++ ++|++|..++++ |++.+|+++.||.||+|++++.+. ++
T Consensus 201 ~~~~~~f~yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~~~---v~~~~G~~~~ad~VI~a~p~~~~~-~l 274 (484)
T 4dsg_A 201 WGPNATFRFPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADAKT---ITFSNGEVVSYDYLISTVPFDNLL-RM 274 (484)
T ss_dssp CSTTSEEEEESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEETTTTE---EEETTSCEEECSEEEECSCHHHHH-HH
T ss_pred CCccceEEeecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEecCCE---EEECCCCEEECCEEEECCCHHHHH-HH
Confidence 112234565 89999999999988542 79999 569999987775 456889899999999999998875 56
Q ss_pred cCC--CCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCee
Q 008069 449 LKG--EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHH 526 (579)
Q Consensus 449 l~~--~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~ 526 (579)
+.+ ..+|+..++.+..+.+. +..+|+++++.+....-...+++++++ .+ .++ .-+++++.++|.++|+|++
T Consensus 275 l~~~~~~~~~~~~~~l~~l~y~-s~~~v~l~~~~~~~~~~~~~~~i~vp~-~~---~~~--~ri~~~s~~~p~~ap~g~~ 347 (484)
T 4dsg_A 275 TKGTGFKGYDEWPAIADKMVYS-STNVIGIGVKGTPPPHLKTACWLYFPE-DT---SPF--YRATVFSNYSKYNVPEGHW 347 (484)
T ss_dssp EECSSCTTGGGHHHHHHHCCEE-EEEEEEEEEESCCCGGGTTCCEEECCS-TT---CSC--SEEECGGGTCGGGSCTTEE
T ss_pred hhccCCCCCHHHHHHHhCCCcC-ceEEEEEEEcCCCcccCCCCeEEEEEc-CC---CeE--EEEEeecCCCcccCCCCeE
Confidence 643 23666767777777765 567999999986421102235555543 21 233 2467788899999999999
Q ss_pred EEEEEeccchhhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008069 527 ILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK 571 (579)
Q Consensus 527 ~l~~~~~~~~~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~l~ 571 (579)
++++.+... +.|. .+ .+++.+.+++.|. ++ .+++
T Consensus 348 ~l~~e~~~~-~~~~-~~-------d~~l~~~a~~~L~-~~-~~~~ 381 (484)
T 4dsg_A 348 SLMLEVSES-KYKP-VN-------HSTLIEDCIVGCL-AS-NLLL 381 (484)
T ss_dssp EEEEEEEEB-TTBC-CC-------TTSHHHHHHHHHH-HT-TSCC
T ss_pred EEEEEEecC-cCCc-CC-------HHHHHHHHHHHHH-Hc-CCCC
Confidence 988876543 3332 22 2578899999998 54 3443
No 18
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.88 E-value=7.4e-22 Score=225.30 Aligned_cols=165 Identities=12% Similarity=0.064 Sum_probs=108.0
Q ss_pred CccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC------CcEEEcCEEEECCChhHHHhhcc
Q 008069 376 GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD------GREFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 376 ~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d------G~~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
+.++.+.||++.|+++|++. .+|++|++|++|..+++++. |++.+ |++++||+||+|+++..+ .+++
T Consensus 562 g~~~~~~gG~~~L~~aLa~~-----l~I~Lnt~V~~I~~~~~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vL-k~l~ 634 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEG-----LDIKLNTAVRQVRYTASGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQP 634 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTT-----CCEECSEEEEEEEEETTEEE-EEEEESSSTTCEEEEEESEEEECCCHHHH-HCSS
T ss_pred CceEEecCcHHHHHHHHHhC-----CCEEeCCeEEEEEEcCCcEE-EEEeecccCCCCeEEECCEEEECCCHHHH-Hhhh
Confidence 45567899999999988763 47999999999999988875 66654 567999999999998765 4421
Q ss_pred ----CCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCe
Q 008069 450 ----KGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGH 525 (579)
Q Consensus 450 ----~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~ 525 (579)
-.+.||..+.+.++.+.++. ..+|+|.|++++|+.+.....++...... ..... ++. ++. +.
T Consensus 635 ~~I~F~P~LP~~k~~AI~~l~~g~-v~KV~L~F~~~fW~~~~~~fG~l~~~~~~--~~~l~-~~~--~~~--------~~ 700 (852)
T 2xag_A 635 PAVQFVPPLPEWKTSAVQRMGFGN-LNKVVLCFDRVFWDPSVNLFGHVGSTTAS--RGELF-LFW--NLY--------KA 700 (852)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECC-CEEEEEECSSCCSCTTCCEEEECCSSSTT--TTTTC-EEE--ECS--------SS
T ss_pred cccccCCCCCHHHHHHHHcCCccc-eEEEEEEcCCcccCCCCCeeeeeccccCC--CCceE-EEe--cCC--------CC
Confidence 12468988888888887765 45999999999987543333332221100 11121 222 121 12
Q ss_pred eEEEEEeccc-hhhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCC
Q 008069 526 HILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPG 569 (579)
Q Consensus 526 ~~l~~~~~~~-~~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~ 569 (579)
.+|..++... ...|..++ .+++.+.+++.|. ++|+.
T Consensus 701 pvLl~~v~G~~a~~l~~ls-------deel~~~~l~~L~-~ifG~ 737 (852)
T 2xag_A 701 PILLALVAGEAAGIMENIS-------DDVIVGRCLAILK-GIFGS 737 (852)
T ss_dssp SEEEEEECHHHHHHGGGSC-------HHHHHHHHHHHHH-HHHCT
T ss_pred CEEEEEecCcCHHHHhcCC-------HHHHHHHHHHHHH-HHhCc
Confidence 2555555322 22343332 3678888999998 77754
No 19
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.88 E-value=1.6e-21 Score=208.68 Aligned_cols=331 Identities=14% Similarity=0.209 Sum_probs=200.6
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeC--------------------Ceeecccccccc
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERD--------------------GYTFDVGSSVMF 214 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~--------------------g~~~~~G~~~~~ 214 (579)
+..+||+|||+|++|+++|+.|+++|++|+|+||++.+||.+.++... +|.+|++++.+.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~ 97 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL 97 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee
Confidence 356999999999999999999999999999999999999999887632 467888888775
Q ss_pred CCCCCCChHHHHHHHHHcCCcee--EeeCCCeEEEEc-------CCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHH
Q 008069 215 GFSDKGNLNLITQALAAVGCEME--VIPDPTTVHFHL-------PNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGE 285 (579)
Q Consensus 215 g~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~ 285 (579)
. ...+.++|.+.|+.-. .......+.+.. ++|..+.++.+....... ....+.++.++.+|+..
T Consensus 98 ~------~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~-~lLs~~eK~~l~kFL~~ 170 (475)
T 3p1w_A 98 V------GGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVS-PLLSLMEKNRCKNFYQY 170 (475)
T ss_dssp T------TSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTC-TTSCHHHHHHHHHHHHH
T ss_pred c------CcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhc-cCCCHHHHHHHHHHHHH
Confidence 3 2357888888887533 333333333321 245566667765443321 11122344555555543
Q ss_pred HHHHHHHhhhhhhhccchhhHHHhhhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHH
Q 008069 286 CWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMIN 365 (579)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 365 (579)
+..... . .+. .+ ...+....++.++++++..++.++.++.....+.......+.++..
T Consensus 171 l~~~~~-------~---~~~-----~~-------~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~ 228 (475)
T 3p1w_A 171 VSEWDA-------N---KRN-----TW-------DNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYL 228 (475)
T ss_dssp HHHCCT-------T---CGG-----GS-------TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHH
T ss_pred HHhhhh-------c---cch-----hh-------hcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHH
Confidence 221100 0 000 00 0001124678899999988888887663321111111112234322
Q ss_pred HHH---HHh---hhh-cCccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEE-eCCEEEEEEeCCCcEEEcCEEEE
Q 008069 366 ASM---VLC---DRH-FGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVIL-EQGKAVGVRLSDGREFYAKTIIS 437 (579)
Q Consensus 366 ~~~---~~~---~~~-~~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~-~~~~v~gV~~~dG~~i~Ad~VV~ 437 (579)
+.. .+. ..+ ...+.||+||++.++++|.+.++++|++|+++++|++|.. +++++++|++.+|++++||.||+
T Consensus 229 ~l~ri~~y~~Sl~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~ 308 (475)
T 3p1w_A 229 TLERIKLYMQSISAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVIC 308 (475)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEE
Confidence 211 111 111 2357899999999999999999999999999999999999 77889999999999999999999
Q ss_pred CCChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCCC-CCccceeeccchhhhcCCcceEEEEcCCCC
Q 008069 438 NATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD-TDCHHFVLEDDWNRLEEPYGSIFLSIPTVL 516 (579)
Q Consensus 438 a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~ 516 (579)
|++.+. . +|... +...........++.+....+ ...-.++++.. .+.+ -+.+|+.+.|.
T Consensus 309 a~~~~~----~-----~p~~~-------~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~--~~~~-~~~iy~~~~s~- 368 (475)
T 3p1w_A 309 DPSYVM----H-----LKNKI-------KKIGQVIRCICILSNPIPETNQTNSCQIIIPQN--QLNR-KSDIYINLVSF- 368 (475)
T ss_dssp CGGGCT----T-----STTSE-------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGG--GGTS-SSCEEEEEEEG-
T ss_pred CCCccc----c-----Ccccc-------cccceEEEEEEEEeccCcccCCCceEEEEeCCc--ccCC-CCCEEEEEECC-
Confidence 988641 0 12110 001112233344566542211 11224555542 1111 12367655332
Q ss_pred CCCCCCCCeeEEEEEecc
Q 008069 517 DSSLAPEGHHILHIFTIC 534 (579)
Q Consensus 517 dp~~aP~G~~~l~~~~~~ 534 (579)
+...+|+|+.++++++..
T Consensus 369 ~~~~cp~G~~i~~~st~~ 386 (475)
T 3p1w_A 369 QHGVTLKGKYIAIVSATV 386 (475)
T ss_dssp GGTSSCTTCEEEEEEEEC
T ss_pred CcCcCCCCcEEEEEEeec
Confidence 334689999999998865
No 20
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.88 E-value=1.5e-20 Score=203.24 Aligned_cols=356 Identities=15% Similarity=0.142 Sum_probs=201.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHH-cC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAA-VG 233 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~-~g 233 (579)
..+||+|||||++||++|+.|++.|+ +|+|+|+.+.+||++.+...+|+.+|.|++++.+.... ..+.+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~-~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGG-KMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSS-SCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCC-CCCHHHHHHHhhcC
Confidence 35899999999999999999999999 89999999999999999999999999999999854321 12236788888 88
Q ss_pred CceeEeeC-CCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhh
Q 008069 234 CEMEVIPD-PTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (579)
Q Consensus 234 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (579)
+....... .....+...+|..+. .......+. . ...+..+.+ .+.. .+..
T Consensus 82 l~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~-~----~~~~~~~~~-------~~~~----~~~~--------- 132 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYKEDGGVYD----EDYVQKRIE-L----ADSVEEMGE-------KLSA----TLHA--------- 132 (472)
T ss_dssp CCEEECCCTTGGGCEECSSSSBCC----HHHHHHHHH-H----HHHHHHHHH-------HHHH----TSCT---------
T ss_pred CceeeccCccccceeEcCCCCCCC----HHHHHHHHH-H----HHHHHHHHH-------HHHH----hhcc---------
Confidence 86532211 111112223343221 111100000 0 001111111 0000 0000
Q ss_pred cChhhhhHHhhhccccHH--HHHHHhcC---CHHHHHHHhhhhh-hhhcCCCCCchHHHH--HHHHhhhhcCccc--eeC
Q 008069 313 KRPLECLTLAYYLPQNAG--NIARKYIK---DPQLLSFIDAECF-IVSTINALQTPMINA--SMVLCDRHFGGIN--YPV 382 (579)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~--~~l~~~~~---~~~l~~~l~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~g~~--~p~ 382 (579)
... ...+.. .++.+... ...+..++..... ......+...++... ...+. ...++.+ .+.
T Consensus 133 -~~~--------~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~ 202 (472)
T 1b37_A 133 -SGR--------DDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATFS-DFGDDVYFVADQ 202 (472)
T ss_dssp -TCT--------TCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHHH-HHCSEEEEECCT
T ss_pred -ccc--------hhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccccccc-ccCCceeeeecC
Confidence 000 000111 11111110 0001111111110 000111111110000 00000 1112222 247
Q ss_pred CChHHHHHHHHHHHHHc--------CceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccC-CCC
Q 008069 383 GGVGGIAKSLAKGLADK--------GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK-GEQ 453 (579)
Q Consensus 383 gG~~~l~~aL~~~l~~~--------G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~-~~~ 453 (579)
||++.++++|++.+.+. |++|+++++|++|..+++++. |++.+|++++||.||+|++++.+...+.. .+.
T Consensus 203 gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~ 281 (472)
T 1b37_A 203 RGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPK 281 (472)
T ss_dssp TCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESC
T ss_pred CcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCC
Confidence 99999999999988765 789999999999999888877 88999989999999999999876433321 346
Q ss_pred CChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEec
Q 008069 454 LPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTI 533 (579)
Q Consensus 454 lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~ 533 (579)
+|+.+++.++++.+++ ..+|++.+++++|+.+.. +.+++..+.+ .....++... |++ .| |.+++++++.
T Consensus 282 Lp~~~~~ai~~~~~~~-~~kv~l~~~~~~w~~~~~-~~~~~~~~~~---~~~~~~~~~~----~~~-~p-~~~~l~~~~~ 350 (472)
T 1b37_A 282 LPTWKVRAIYQFDMAV-YTKIFLKFPRKFWPEGKG-REFFLYASSR---RGYYGVWQEF----EKQ-YP-DANVLLVTVT 350 (472)
T ss_dssp CCHHHHHHHHHSEEEC-EEEEEEECSSCCSCCSTT-CSEEEECCSS---TTSSCEEEEC----TTT-ST-TCCEEEEEEE
T ss_pred CCHHHHHHHHhcCCcc-eeEEEEECCCcCCCCCCC-cceEEecccC---Cccceeeecc----cCC-CC-CCCEEEEEec
Confidence 8888777888877654 569999999988765322 2222211111 1111233222 333 34 6677776654
Q ss_pred cc-hhhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008069 534 CS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK 571 (579)
Q Consensus 534 ~~-~~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~l~ 571 (579)
.. ...|..+ .++++.+.+++.|+ +++|+.+
T Consensus 351 ~~~a~~~~~~-------~~~e~~~~~l~~L~-~~~Pg~~ 381 (472)
T 1b37_A 351 DEESRRIEQQ-------SDEQTKAEIMQVLR-KMFPGKD 381 (472)
T ss_dssp HHHHHHHHTS-------CHHHHHHHHHHHHH-HHCTTSC
T ss_pred hHHHHHHHhC-------CHHHHHHHHHHHHH-HHcCCCC
Confidence 22 1234332 35789999999999 8999853
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.88 E-value=6.5e-21 Score=207.43 Aligned_cols=356 Identities=16% Similarity=0.177 Sum_probs=204.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEe--eCCeeeccccccccCCCCCCChHHHHHHHHHcC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE--RDGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~--~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g 233 (579)
..+||+|||||++||++|+.|+++|++|+|+|+.+++||++.++. ..|+.+|.|++++.. ....+.++++++|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~g 106 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPE-----KHRIVREYIRKFD 106 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEET-----TCHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccc-----hHHHHHHHHHHhC
Confidence 458999999999999999999999999999999999999998887 569999999998864 2356788999999
Q ss_pred CceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHH-hC---CCcH-HHHHHHHHH-HHHHHHHhhhhhhhccchhhHH
Q 008069 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTS-KF---PHEK-EGVLAFYGE-CWKIFNALNSLELKSLEEPIYL 307 (579)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~-~~---p~~~-~~i~~f~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (579)
+............+...+|..... ..+...... .+ +... .....++.. .......+... .
T Consensus 107 ~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----- 172 (498)
T 2iid_A 107 LRLNEFSQENDNAWYFIKNIRKKV----GEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRT-----N----- 172 (498)
T ss_dssp CCEEEECSCCTTSEEEETTEEEEH----HHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHS-----C-----
T ss_pred CCceeecccCCccEEEeCCeeecc----cccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhc-----c-----
Confidence 876533211100011112221111 000000000 00 0000 001111111 01111100000 0
Q ss_pred HhhhhcChhhhhHHhhhccccHHHHHHHhcC-CHHHHHHHhhhhhhhhcCCCCCchHHHHHHHH-hhhhcCccceeCCCh
Q 008069 308 FGQFFKRPLECLTLAYYLPQNAGNIARKYIK-DPQLLSFIDAECFIVSTINALQTPMINASMVL-CDRHFGGINYPVGGV 385 (579)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~p~gG~ 385 (579)
. ......+...++.+++.+... ++.....+......... ............ .......++++.||+
T Consensus 173 --------~-~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~gG~ 240 (498)
T 2iid_A 173 --------C-SYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSG---YYVSFIESLKHDDIFAYEKRFDEIVDGM 240 (498)
T ss_dssp --------H-HHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGG---TTSBHHHHHHHHHHHTTCCCEEEETTCT
T ss_pred --------H-HHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcccc---hhHHHHHHHHHHhccccCcceEEeCCcH
Confidence 0 000112233566677766542 33333322211100000 001111111100 011224567899999
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc----EEEcCEEEECCChhHHHhhccCCCCCChHHHHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR----EFYAKTIISNATRWDTFGKLLKGEQLPKEEENF 461 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~----~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~ 461 (579)
+.++++|++.+.+ +|+++++|++|..+++++. |++.+|+ +++||.||+|+++..+ ..+...+.+|+...+.
T Consensus 241 ~~l~~~l~~~l~~---~i~~~~~V~~I~~~~~~v~-v~~~~~~~~~~~~~ad~vI~t~p~~~~-~~i~f~p~Lp~~~~~a 315 (498)
T 2iid_A 241 DKLPTAMYRDIQD---KVHFNAQVIKIQQNDQKVT-VVYETLSKETPSVTADYVIVCTTSRAV-RLIKFNPPLLPKKAHA 315 (498)
T ss_dssp THHHHHHHHHTGG---GEESSCEEEEEEECSSCEE-EEEECSSSCCCEEEESEEEECSCHHHH-TTSEEESCCCHHHHHH
T ss_pred HHHHHHHHHhccc---ccccCCEEEEEEECCCeEE-EEEecCCcccceEEeCEEEECCChHHH-hheecCCCCCHHHHHH
Confidence 9999999988854 8999999999999887765 7776665 4899999999998764 4554334599888888
Q ss_pred HHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEeccc-hhhhc
Q 008069 462 QKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICS-IEDWE 540 (579)
Q Consensus 462 ~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~~-~~~w~ 540 (579)
++.+.+++ ..+|++++++++|+.+-....+.+. +.|. .++..++. ..|+|..+|..++... ...|.
T Consensus 316 i~~l~~~~-~~kv~l~~~~~~w~~~~~~~~~~~~------~~~~--~~~~~~s~----~~p~g~~~L~~~~~g~~a~~~~ 382 (498)
T 2iid_A 316 LRSVHYRS-GTKIFLTCTTKFWEDDGIHGGKSTT------DLPS--RFIYYPNH----NFTNGVGVIIAYGIGDDANFFQ 382 (498)
T ss_dssp HHHCCEEC-EEEEEEEESSCGGGGGTCCSSEEEE------SSTT--CEEECCSS----CCTTSCEEEEEEEEHHHHHTTT
T ss_pred HHhCCCcc-eeEEEEEeCCCCccCCCccCCcccC------CCCc--ceEEECCC----CCCCCCcEEEEEeCCccHhhhh
Confidence 88888776 5699999999887542101111111 1122 23444442 2577877777765322 22343
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHhhCC
Q 008069 541 GLAQKDYDAKKELVADEIINRLENKLFP 568 (579)
Q Consensus 541 ~~~~~~y~~~ke~~~~~il~~le~~~~P 568 (579)
.++ .+++.+.+++.|+ ++++
T Consensus 383 ~~~-------~~~~~~~~l~~L~-~~~g 402 (498)
T 2iid_A 383 ALD-------FKDCADIVFNDLS-LIHQ 402 (498)
T ss_dssp TSC-------HHHHHHHHHHHHH-HHHT
T ss_pred cCC-------HHHHHHHHHHHHH-HHcC
Confidence 332 3568888899998 6665
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.86 E-value=1.3e-19 Score=193.01 Aligned_cols=280 Identities=13% Similarity=0.095 Sum_probs=171.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC-CcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g-~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
..+||+|||||++||+||+.|+++| ++|+|+|+.+++||++.|+..+|+.+|.|++++.. ....+.++++++|+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-----~~~~~~~l~~~~g~ 79 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-----SYDTIQEIMDRTGD 79 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-----TCHHHHHHHHHHCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-----CcHHHHHHHHHhCC
Confidence 4689999999999999999999999 89999999999999999999999999999998753 23467889999998
Q ss_pred ceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcC
Q 008069 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (579)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (579)
++.. ......+.+.+|.......+.... .. +.....++...+... ...... ...+..
T Consensus 80 ~~~~--~~~~~~~~~~~g~~~~~~~~~~~~------------~~---~~~~~~~l~~~~~~~-~~~~~~-----~~~~~~ 136 (424)
T 2b9w_A 80 KVDG--PKLRREFLHEDGEIYVPEKDPVRG------------PQ---VMAAVQKLGQLLATK-YQGYDA-----NGHYNK 136 (424)
T ss_dssp CCCS--CCCCEEEECTTSCEECGGGCTTHH------------HH---HHHHHHHHHHHHHTT-TTTTTS-----SSSSSC
T ss_pred cccc--ccccceeEcCCCCEeccccCcccc------------hh---HHHHHHHHHHHHhhh-hhhccc-----ccchhh
Confidence 7532 222334555666543221111110 00 000011111111000 000000 000000
Q ss_pred hhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHH-----hhhhcCccceeCCChHHHH
Q 008069 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVL-----CDRHFGGINYPVGGVGGIA 389 (579)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~p~gG~~~l~ 389 (579)
.......++.+++++...+.....++....... ...+.+.|+.+..... .....++.+.+.+|++.++
T Consensus 137 ------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 209 (424)
T 2b9w_A 137 ------VHEDLMLPFDEFLALNGCEAARDLWINPFTAFG-YGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMF 209 (424)
T ss_dssp ------CCGGGGSBHHHHHHHTTCGGGHHHHTTTTCCCC-CCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHH
T ss_pred ------hhhhhccCHHHHHHhhCcHHHHHHHHHHHHhhc-cCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHH
Confidence 011234678888887765543333322222211 1245566665532111 1111245667899999999
Q ss_pred HHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCC
Q 008069 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAP 469 (579)
Q Consensus 390 ~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~ 469 (579)
++|.+.+ +.+|+++++|++|..+++++. |++.+|+ ++||.||+|++++.++ ++++. .| ..++.+.++.+.+
T Consensus 210 ~~l~~~l---~~~v~~~~~V~~i~~~~~~v~-v~~~~g~-~~ad~Vv~a~~~~~~~-~~l~~--~~-~~~~~~~~~~~~~ 280 (424)
T 2b9w_A 210 EHLNATL---EHPAERNVDITRITREDGKVH-IHTTDWD-RESDVLVLTVPLEKFL-DYSDA--DD-DEREYFSKIIHQQ 280 (424)
T ss_dssp HHHHHHS---SSCCBCSCCEEEEECCTTCEE-EEESSCE-EEESEEEECSCHHHHT-TSBCC--CH-HHHHHHTTCEEEE
T ss_pred HHHHHhh---cceEEcCCEEEEEEEECCEEE-EEECCCe-EEcCEEEECCCHHHHh-hccCC--CH-HHHHHHhcCCcce
Confidence 9998776 568999999999998888876 8888885 8999999999998764 55542 33 3334445555433
Q ss_pred CeEEEEEeecCC
Q 008069 470 SFLSIHMGVKAE 481 (579)
Q Consensus 470 s~~~v~lg~~~~ 481 (579)
+.+.+.+...
T Consensus 281 --~~~~~~~~~~ 290 (424)
T 2b9w_A 281 --YMVDACLVKE 290 (424)
T ss_dssp --EEEEEEEESS
T ss_pred --eEEEEEEecc
Confidence 3444455443
No 23
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.86 E-value=5.3e-24 Score=249.94 Aligned_cols=176 Identities=15% Similarity=0.069 Sum_probs=143.9
Q ss_pred hccccccccccCCC-CCcccccccccccccccccccccccccccccCCccccccccccCCCCCCC-----CCCCCCCCcc
Q 008069 43 QSFGQRDAMQLGSS-SKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSS-----NFNGSTLRSE 116 (579)
Q Consensus 43 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 116 (579)
..|+.++|++||+| ++|++|+|++.||+||+||.|+++.+ +++|.+|....+++|++| +||++.+||+
T Consensus 65 ~~~~~~~~~~~a~rc~~c~~~~C~~~CP~~~~ip~~~~~~~------~g~~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~ 138 (1025)
T 1gte_A 65 TTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSIS------NKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVG 138 (1025)
T ss_dssp SCCCHHHHHHHHHHSCCCTTCHHHHTSTTCCCHHHHHHHHH------TTCHHHHHHHHHHHCTTHHHHHHHCCGGGSGGG
T ss_pred CCCCHHHHHHHHHHhcCCCCCccccCCCCCCCHHHHHHHHH------CCCHHHHHHHHHhcCChhHhhcCCCCChhhHHh
Confidence 47788899999999 99999999999999999999999999 999999999999999999 9999999999
Q ss_pred ccccccccccchhhhhccccccccceeecCCCcCCC--------CCCCCccEEEECCChhHHHHHHHHHHcCC-cEEEEe
Q 008069 117 DLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMS--------RGADDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLE 187 (579)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e 187 (579)
+|+++.....+++|+.+++++.+.....++.....+ .....+||+|||||++|+++|..|++.|+ +|+|||
T Consensus 139 ~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E 218 (1025)
T 1gte_A 139 GCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFE 218 (1025)
T ss_dssp GCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred hCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECccHHHHHHHHHHHhcCCCcEEEEe
Confidence 999986556899999999999998665555432111 11246899999999999999999999999 799999
Q ss_pred cCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 188 KYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 188 ~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
+.+.+||... +.++.|... ........+.+++.|+++
T Consensus 219 ~~~~~GG~~~-~~ip~~~~~-----------~~~~~~~~~~~~~~gv~~ 255 (1025)
T 1gte_A 219 KQEYVGGLST-SEIPQFRLP-----------YDVVNFEIELMKDLGVKI 255 (1025)
T ss_dssp SSSSCSTHHH-HTSCTTTSC-----------HHHHHHHHHHHHTTTCEE
T ss_pred CCCCCCcccc-ccCCcccCC-----------HHHHHHHHHHHHHCCcEE
Confidence 9999999753 334433221 112233446677777764
No 24
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.86 E-value=1.1e-19 Score=199.91 Aligned_cols=260 Identities=12% Similarity=0.096 Sum_probs=159.4
Q ss_pred HHHHHHHHcCCceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccch
Q 008069 224 LITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEE 303 (579)
Q Consensus 224 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~ 303 (579)
.+.++|.++|+.-.+........+.+.+|....++.+...+... ....+.++..+.+|+..+.. +. . .
T Consensus 238 ~lv~LL~~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s-~~Lsl~EKr~L~kFl~~~~~-~~------~----~ 305 (650)
T 1vg0_A 238 LLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNS-KQLTMVEKRMLMKFLTFCVE-YE------E----H 305 (650)
T ss_dssp HHHHHHHHHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHC-SSSCHHHHHHHHHHHHHHHT-GG------G----C
T ss_pred HHHHHHHHcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhC-cCCCHHHHHHHHHHHHHHHH-hc------c----C
Confidence 45677777775322211111223444777777788877665543 22223355555555544321 00 0 0
Q ss_pred hhHHHhhhhcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHH---HHHhh--h-h-cC
Q 008069 304 PIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS---MVLCD--R-H-FG 376 (579)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~--~-~-~~ 376 (579)
+ .....+...++.+++++++.++.++.++....... .....++..+. ..+.. . + .+
T Consensus 306 p--------------~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~lal~---~~~~~pa~~~l~~i~~~l~sl~~yg~s 368 (650)
T 1vg0_A 306 P--------------DEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMT---SETTSCTVDGLKATKKFLQCLGRYGNT 368 (650)
T ss_dssp H--------------HHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHTTC-----CCSCBHHHHHHHHHHHHHHTTSSSSS
T ss_pred h--------------HHHhhhccCCHHHHHHHhCCCHHHHHHHHHHHhcc---CCCCCchhHHHHHHHHHHHHHHhhccC
Confidence 0 01223456799999999999999998886533211 11223443332 11111 1 1 13
Q ss_pred ccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeC--CEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCC
Q 008069 377 GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQL 454 (579)
Q Consensus 377 g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~--~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~l 454 (579)
+++||.||++.|+++|.+.++.+||+|+++++|++|.+++ ++++||+..+|++++||.||++.. . ++.. +
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~--~-----lp~~-~ 440 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS--Y-----LSEN-T 440 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG--G-----BCTT-T
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh--h-----cCHh-H
Confidence 7899999999999999999999999999999999999988 889999988899999999998322 1 2221 1
Q ss_pred ChHHHHHHHhhccCCCeEEEEEeecCCcCCCCCC--ccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEe
Q 008069 455 PKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTD--CHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFT 532 (579)
Q Consensus 455 p~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~ 532 (579)
. .+..+ .....+.+.++.+..+.+.. ...++++.. . .....+|+.++|. |++.+|+|++++++.+
T Consensus 441 ~-------~~~~~-~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~-~---g~~~~V~i~~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 441 C-------SRVQY-RQISRAVLITDGSVLRTDADQQVSILTVPAE-E---PGSFAVRVIELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp T-------TTCCC-EEEEEEEEEESSCSSCCSCCCCCEEEEECCS-S---TTSCCEEEEEECG-GGTSSCTTCEEEEEEE
T ss_pred h-------ccccc-cceEEEEEEecCCCCCcCCCcceEEEEccCc-c---CCCCCEEEEEeCC-CCCCCCCCCEEEEEEe
Confidence 0 01111 23456777788765332211 122334321 1 1123588988887 8999999999999877
Q ss_pred c
Q 008069 533 I 533 (579)
Q Consensus 533 ~ 533 (579)
.
T Consensus 508 ~ 508 (650)
T 1vg0_A 508 M 508 (650)
T ss_dssp E
T ss_pred e
Confidence 5
No 25
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.84 E-value=2.1e-20 Score=204.49 Aligned_cols=280 Identities=15% Similarity=0.110 Sum_probs=162.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC-CcEEEEecCCCCCcceeEEee-CCeeeccccccccCCCCCCChHHHHHHHHHcC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g-~~v~~~e~~~~~gg~~~t~~~-~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g 233 (579)
..+||+|||||++||+||+.|+++| ++|+|||+++++||++.|... +|+.+|.|++++.+... +.+.+++.++|
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~----~~~~~~~~~lg 82 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLT----NPLFLEEAQLS 82 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTT----CHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCC----ChHHHHHHHhC
Confidence 3589999999999999999999999 999999999999999999886 89999999999876422 22344455555
Q ss_pred CceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhc
Q 008069 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFK 313 (579)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (579)
+.... ..+.+.++..+.+..+.... .......+..+.+...+....... ....
T Consensus 83 ~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------- 135 (516)
T 1rsg_A 83 LNDGR------TRFVFDDDNFIYIDEERGRV-------DHDKELLLEIVDNEMSKFAELEFH---QHLG----------- 135 (516)
T ss_dssp HHHCC------CCEECCCCCCEEEETTTEEC-------TTCTTTCHHHHHHHHHHHHHHHC-------------------
T ss_pred CCCcc------eeEEECCCCEEEEcCCCccc-------cccHHHHHHHHHHHHHHHHHHHhh---hccC-----------
Confidence 42100 01112223222222211000 000001111122211111111000 0000
Q ss_pred ChhhhhHHhhhccccHHHHHHHhcCC------H----HHHHHHhhhhhhhhcCCCCCchHHHHHHHHhhhhcCccceeCC
Q 008069 314 RPLECLTLAYYLPQNAGNIARKYIKD------P----QLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVG 383 (579)
Q Consensus 314 ~~~~~~~~~~~~~~s~~~~l~~~~~~------~----~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~g 383 (579)
....++.+++.+++.. + .+..++.... .+.+..+...++.+.. . ...+...++.|
T Consensus 136 ----------~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~-~~~g~~~~~~s~~~~~---~-~~~~~~~~~~g 200 (516)
T 1rsg_A 136 ----------VSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLE-LWHGLDWKLLSAKDTY---F-GHQGRNAFALN 200 (516)
T ss_dssp ------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGH-HHHTBCTTTSBHHHHC---C-CCSSCCEEESC
T ss_pred ----------CCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHH-HHhCCChHHCChHHHH---h-hccCcchhhhC
Confidence 0012233333222110 0 1112221111 1122334444443311 1 12233456777
Q ss_pred ChHHHHHHHHHHHHHcCceEEeCceeeEEEEe-CCEEEEEEeCCCcEEEcCEEEECCChhHHHhh----------ccCCC
Q 008069 384 GVGGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRLSDGREFYAKTIISNATRWDTFGK----------LLKGE 452 (579)
Q Consensus 384 G~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~-~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~----------Ll~~~ 452 (579)
++.++++|++.+. +++|++|++|++|..+ ++.+ .|++.+|++++||.||+|+++..+... +.-.+
T Consensus 201 -~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P 276 (516)
T 1rsg_A 201 -YDSVVQRIAQSFP--QNWLKLSCEVKSITREPSKNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQP 276 (516)
T ss_dssp -HHHHHHHHHTTSC--GGGEETTCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEES
T ss_pred -HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCCCeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecC
Confidence 9999999887774 3689999999999986 4444 588999988999999999998876321 11123
Q ss_pred CCChHHHHHHHhhccCCCeEEEEEeecCCcCCCC
Q 008069 453 QLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD 486 (579)
Q Consensus 453 ~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~ 486 (579)
.+|..+.+.++++.+++ ..+|++.+++++|+.+
T Consensus 277 ~Lp~~~~~ai~~~~~~~-~~Kv~l~f~~~fW~~~ 309 (516)
T 1rsg_A 277 PLKPVIQDAFDKIHFGA-LGKVIFEFEECCWSNE 309 (516)
T ss_dssp CCCHHHHHHTTSSCCCC-CEEEEEEESSCCSCCS
T ss_pred CCCHHHHHHHHhCCCCc-ceEEEEEeCCCCCCCC
Confidence 58888887877777654 5699999999998754
No 26
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.83 E-value=2.1e-18 Score=193.84 Aligned_cols=111 Identities=24% Similarity=0.298 Sum_probs=87.6
Q ss_pred cchhhhhccccccccceee-cCCCcC-CCCCCCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCC
Q 008069 126 NRDFALMAKTVMSVDNLVE-IGGNEG-MSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDG 203 (579)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g 203 (579)
.++.|..+++++.+.+... ++.... .......+||+|||||++||++|+.|+++|++|+|+|+.+.+||++.+++..|
T Consensus 74 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~ 153 (662)
T 2z3y_A 74 DTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGN 153 (662)
T ss_dssp CHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETT
T ss_pred ChHHHHHHHHHHHHHHHHhcCCccccCCCcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccccC
Confidence 5688889998887776554 333221 11234568999999999999999999999999999999999999999999999
Q ss_pred eeeccccccccCCCCCCChHHHHHHHHHcCCceeEee
Q 008069 204 YTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIP 240 (579)
Q Consensus 204 ~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~ 240 (579)
+.+|.|++++.+... +.+..+.+++|+++....
T Consensus 154 ~~~~~G~~~~~~~~~----~~~~~l~~~l~~~~~~~~ 186 (662)
T 2z3y_A 154 YVADLGAMVVTGLGG----NPMAVVSKQVNMELAKIK 186 (662)
T ss_dssp EEEESSCCEECCSBT----CHHHHHHHHHTCCEEECC
T ss_pred chhhcCcEEEeCCCC----chHHHHHHHhCcchhccc
Confidence 999999999876422 234577788888765443
No 27
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.83 E-value=5.1e-19 Score=188.71 Aligned_cols=285 Identities=19% Similarity=0.188 Sum_probs=177.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeC---CeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERD---GYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~---g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
+||+|||||++|++||+.|+++|++|+|+|+.+.+||++.+.... |+.++.|++++.... ...+.++++++|+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~----~~~~~~~~~~~g~ 77 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKH----HPRLAAELDRYGI 77 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTT----CHHHHHHHHHHTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCC----cHHHHHHHHHhCC
Confidence 799999999999999999999999999999999999999887766 999999998886421 3456778888998
Q ss_pred ceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcC
Q 008069 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (579)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (579)
+...........+...++............ ...+......+......+.. ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~~~~---~~----------- 129 (431)
T 3k7m_X 78 PTAAASEFTSFRHRLGPTAVDQAFPIPGSE--------------AVAVEAATYTLLRDAHRIDL---EK----------- 129 (431)
T ss_dssp CEEECCCCCEECCBSCTTCCSSSSCCCGGG--------------HHHHHHHHHHHHHHHTTCCT---TT-----------
T ss_pred eeeecCCCCcEEEEecCCeecCCCCCCHHH--------------HHHHHHHHHHHHHHHHhcCC---CC-----------
Confidence 765433222221111222111000000000 01111111111111111100 00
Q ss_pred hhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHhhh-------hcCccceeCCChHH
Q 008069 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDR-------HFGGINYPVGGVGG 387 (579)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~p~gG~~~ 387 (579)
+........+. .++.+++.+....+....++........+..+.+.+.......+... .......+.+|+..
T Consensus 130 ~~~~~~~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (431)
T 3k7m_X 130 GLENQDLEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSAD 208 (431)
T ss_dssp CTTSSSCGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHH
T ss_pred CccCcchhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHH
Confidence 00000011122 56778888877777777666554444445555555554332211110 00111157889988
Q ss_pred HHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhcc
Q 008069 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVK 467 (579)
Q Consensus 388 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~ 467 (579)
+.+.+.+ +.| +|+++++|++|..++++++ |++.+|++++||.||+|+|+..+ ..+.-.+.+|....+.+....+
T Consensus 209 l~~~~~~---~~g-~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vi~a~~~~~l-~~i~~~p~l~~~~~~~~~~~~~ 282 (431)
T 3k7m_X 209 LVDAMSQ---EIP-EIRLQTVVTGIDQSGDVVN-VTVKDGHAFQAHSVIVATPMNTW-RRIVFTPALPERRRSVIEEGHG 282 (431)
T ss_dssp HHHHHHT---TCS-CEESSCCEEEEECSSSSEE-EEETTSCCEEEEEEEECSCGGGG-GGSEEESCCCHHHHHHHHHCCC
T ss_pred HHHHHHh---hCC-ceEeCCEEEEEEEcCCeEE-EEECCCCEEEeCEEEEecCcchH-hheeeCCCCCHHHHHHHHhCCC
Confidence 8887754 346 9999999999998877776 88889988999999999998765 4554445788877777766654
Q ss_pred CCCeEEEEEeecCCc
Q 008069 468 APSFLSIHMGVKAEV 482 (579)
Q Consensus 468 ~~s~~~v~lg~~~~~ 482 (579)
.. ..+|++.++.++
T Consensus 283 ~~-~~kv~~~~~~~~ 296 (431)
T 3k7m_X 283 GQ-GLKILIHVRGAE 296 (431)
T ss_dssp CC-EEEEEEEEESCC
T ss_pred cc-eEEEEEEECCCC
Confidence 44 479999998765
No 28
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.77 E-value=8.1e-17 Score=182.68 Aligned_cols=350 Identities=17% Similarity=0.132 Sum_probs=190.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEee-CCeeeccccccccCCCCCCChHHHHHHHHHcCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~-~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~ 234 (579)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+||++.+... +|+.+|.|++++.|.. .+.+..+++++|+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~----~np~~~l~~~lGl 410 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI----NNPVALMCEQLGI 410 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCT----TCHHHHHHHHHTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCc----cChHHHHHHHhCC
Confidence 4689999999999999999999999999999999999999988764 6899999999998643 3346678889998
Q ss_pred ceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcC
Q 008069 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (579)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (579)
+........ .+...+|... .. ....... ..+..+.... ..+...........
T Consensus 411 ~~~~~~~~~--~l~~~~g~~~----~~-~~~~~~~-------~~~~~ll~~~----~~~~~~~~~~~d~s---------- 462 (776)
T 4gut_A 411 SMHKFGERC--DLIQEGGRIT----DP-TIDKRMD-------FHFNALLDVV----SEWRKDKTQLQDVP---------- 462 (776)
T ss_dssp CCEECCSCC--CEECTTSCBC----CH-HHHHHHH-------HHHHHHHHHH----HHHGGGCCGGGCCB----------
T ss_pred ccccccccc--ceEccCCccc----ch-hHHHHHH-------HHHHHHHHHH----HHHhhccccccccc----------
Confidence 755433221 1222333211 00 1110000 0011111111 11000000000000
Q ss_pred hhhhhHHhhhccccHHHHHHHhcCC-----HHHHHHHhhhhhhhhcCCCCCchHHHHHH-HHhhhhcCccceeCCChHHH
Q 008069 315 PLECLTLAYYLPQNAGNIARKYIKD-----PQLLSFIDAECFIVSTINALQTPMINASM-VLCDRHFGGINYPVGGVGGI 388 (579)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~l~~~~~~-----~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~p~gG~~~l 388 (579)
+.........+++.+.... .....+.........+..+...+...... .......+......+|++.+
T Consensus 463 ------l~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l 536 (776)
T 4gut_A 463 ------LGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVI 536 (776)
T ss_dssp ------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHH
T ss_pred ------HHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHH
Confidence 0000000011111111100 00000000001111122222222111000 00011223455678999998
Q ss_pred HHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhh-ccCCCCCChHHHHHHHhhcc
Q 008069 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGK-LLKGEQLPKEEENFQKLYVK 467 (579)
Q Consensus 389 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~-Ll~~~~lp~~~~~~~~~~~~ 467 (579)
.++|++ |++|+++++|++|..+++++. |++.+|+++.||.||+|+++..+... +.-.+.+|....+.++.+.+
T Consensus 537 ~~aLa~-----gl~I~l~t~V~~I~~~~~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~ 610 (776)
T 4gut_A 537 IEKLAE-----GLDIQLKSPVQCIDYSGDEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGA 610 (776)
T ss_dssp HHHHHT-----TSCEESSCCEEEEECSSSSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEE
T ss_pred HHHHHh-----CCcEEcCCeeEEEEEcCCEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCC
Confidence 888764 679999999999998888776 88889989999999999998765321 21234688887777887766
Q ss_pred CCCeEEEEEeecCCcCCCCC---CccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCC-eeEEEEEeccc-hhhhcCC
Q 008069 468 APSFLSIHMGVKAEVLPPDT---DCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEG-HHILHIFTICS-IEDWEGL 542 (579)
Q Consensus 468 ~~s~~~v~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G-~~~l~~~~~~~-~~~w~~~ 542 (579)
+. ..+|++.+++++|..+. .....+... . ...+.+.+...+ .|+| ..+|..++... ...|..+
T Consensus 611 g~-~~KV~l~f~~~FW~~~~~g~~~fG~l~~~-~----~~~~~~~~~~d~------~p~g~~~vL~~~i~G~~a~~l~~l 678 (776)
T 4gut_A 611 GI-IEKIALQFPYRFWDSKVQGADFFGHVPPS-A----SKRGLFAVFYDM------DPQKKHSVLMSVIAGEAVASVRTL 678 (776)
T ss_dssp EC-CEEEEEECSSCTTHHHHTTCSEEEECCSS-G----GGTTEEEEEEES------CTTSCSCEEEEEECTHHHHHHHTS
T ss_pred ee-EEEEEEecCcccccccCCCCceEEeecCC-c----CCCceEEEEecC------CCCCCceEEEEEecchhHHHHHcC
Confidence 54 56999999999875321 111111111 0 011112222211 2444 34555555432 2334443
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhCCC
Q 008069 543 AQKDYDAKKELVADEIINRLENKLFPG 569 (579)
Q Consensus 543 ~~~~y~~~ke~~~~~il~~le~~~~P~ 569 (579)
+ .+++.+.+++.|. ++|+.
T Consensus 679 s-------deel~~~~l~~L~-~ifg~ 697 (776)
T 4gut_A 679 D-------DKQVLQQCMATLR-ELFKE 697 (776)
T ss_dssp C-------HHHHHHHHHHHHH-HHTTT
T ss_pred C-------HHHHHHHHHHHHH-HHhCc
Confidence 3 3678899999999 78864
No 29
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.74 E-value=1.8e-16 Score=163.69 Aligned_cols=171 Identities=17% Similarity=0.122 Sum_probs=113.7
Q ss_pred cceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCC--CCCC
Q 008069 378 INYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG--EQLP 455 (579)
Q Consensus 378 ~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~--~~lp 455 (579)
.+...+|+..+.+.|++.+ |++|+++++|++|..+++++. |++.+|+++.+|.||+|+++..+ .+|+.+ +.+|
T Consensus 104 ~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~-v~~~~g~~~~ad~vV~A~p~~~~-~~ll~~~~~~l~ 178 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWE-VSKQTGSPEQFDLIVLTMPVPEI-LQLQGDITTLIS 178 (342)
T ss_dssp EEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEE-EEESSSCCEEESEEEECSCHHHH-TTCBSTHHHHSC
T ss_pred ceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEE-EEECCCCEEEcCEEEECCCHHHH-HHHhcccccccC
Confidence 4567789999999998776 899999999999999888776 88888888899999999998876 467764 2367
Q ss_pred hHHHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCC-CCCeeEEEEEecc
Q 008069 456 KEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLA-PEGHHILHIFTIC 534 (579)
Q Consensus 456 ~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~a-P~G~~~l~~~~~~ 534 (579)
+...+.+..+.+.+ ..+|+++++++.+. +.....++++++ .+..+ +...+.+ |.+. |+|...+.+++..
T Consensus 179 ~~~~~~l~~~~~~~-~~~v~l~~~~~~~~-~~~~~g~~~~~~-----~~~~~--~~~~~~k-~~r~~~~~~~~~v~~~~~ 248 (342)
T 3qj4_A 179 ECQRQQLEAVSYSS-RYALGLFYEAGTKI-DVPWAGQYITSN-----PCIRF--VSIDNKK-RNIESSEIGPSLVIHTTV 248 (342)
T ss_dssp HHHHHHHHTCCBCC-EEEEEEECSSCC---CCSCSEEECSSC-----SSEEE--EEEHHHH-TTCCCC-CCCEEEEEECH
T ss_pred HHHHHHHhcCCccc-cEEEEEEECCCCcc-CCceeeEEccCC-----cceEE--EEccccC-CCCCCCCCCceEEEECCH
Confidence 66777888887764 66999999976532 222334444321 11222 2223333 3332 3343444444432
Q ss_pred c-hhhhcCCChhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 008069 535 S-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK 571 (579)
Q Consensus 535 ~-~~~w~~~~~~~y~~~ke~~~~~il~~le~~~~P~l~ 571 (579)
. ..++.+ ..++++.+.+++.|+ ++++...
T Consensus 249 ~~~~~~~~-------~~~~~~~~~~~~~l~-~~~g~~~ 278 (342)
T 3qj4_A 249 PFGVTYLE-------HSIEDVQELVFQQLE-NILPGLP 278 (342)
T ss_dssp HHHHHTTT-------SCHHHHHHHHHHHHH-HHSCSCC
T ss_pred HHHHHhhc-------CCHHHHHHHHHHHHH-HhccCCC
Confidence 1 122222 235789999999999 7887544
No 30
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.73 E-value=1.7e-17 Score=175.35 Aligned_cols=299 Identities=16% Similarity=0.127 Sum_probs=173.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHc-CCcEEEEecCCCCCcceeEEee--CCeee-ccccccccCCCCCCChHHHHHHHHH
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYVIPGGSSGYYER--DGYTF-DVGSSVMFGFSDKGNLNLITQALAA 231 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~-g~~v~~~e~~~~~gg~~~t~~~--~g~~~-~~G~~~~~g~~~~~~~~~~~~~l~~ 231 (579)
..+||+|||||++||++|+.|+++ |++|+|+|+++.+||++.+... .|+.+ +.|++++.. ....+.+++++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~-----~~~~~~~~~~~ 80 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT-----SNKRVWDYVRQ 80 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE-----SCHHHHHHHTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC-----CcHHHHHHHHH
Confidence 468999999999999999999999 9999999999999999999887 68887 599998873 23457788888
Q ss_pred cCCceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhh
Q 008069 232 VGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQF 311 (579)
Q Consensus 232 ~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (579)
+|+ +... .. . .+...+|..+.++.+...+.. +....- ....+..++.. .... .
T Consensus 81 ~g~-~~~~-~~-~-~~~~~~G~~~~~p~~~~~~~~-l~~~~~-~~~~~~~~l~~------~~~~-----~---------- 133 (399)
T 1v0j_A 81 FTD-FTDY-RH-R-VFAMHNGQAYQFPMGLGLVSQ-FFGKYF-TPEQARQLIAE------QAAE-----I---------- 133 (399)
T ss_dssp TCC-BCCC-CC-C-EEEEETTEEEEESSSHHHHHH-HHTSCC-CHHHHHHHHHH------HGGG-----S----------
T ss_pred hhh-hhcc-cc-c-eEEEECCEEEeCCCCHHHHHH-HhcccC-CHHHHHHHHHH------Hhhc-----c----------
Confidence 886 2211 11 1 122345766777665533221 111100 01111111100 0000 0
Q ss_pred hcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHH---H-h-hhhc-Ccc-ceeCCC
Q 008069 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMV---L-C-DRHF-GGI-NYPVGG 384 (579)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~-~g~-~~p~gG 384 (579)
. .....++.+++.+.+.++.+..++...+....+.++.+.++...... . . ..+. ..+ .+|+||
T Consensus 134 --~--------~~~~~s~~e~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG 203 (399)
T 1v0j_A 134 --D--------TADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDG 203 (399)
T ss_dssp --C--------TTC----CCHHHHHHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTH
T ss_pred --C--------CCCcccHHHHHHHHHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhccccccc
Confidence 0 01134556666666666666666655443444455555554432100 0 0 0111 123 289999
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEE-EcCEEEECCChhHHHhhccCCCCCChHHHHHHH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREF-YAKTIISNATRWDTFGKLLKGEQLPKEEENFQK 463 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i-~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~ 463 (579)
+++++++|++ +.|++|++|++|++|..+ | + ++ .||.||+|+++..+. ++.- .
T Consensus 204 ~~~l~~~l~~---~~g~~I~l~~~V~~I~~~------v---~--~~~~aD~VI~t~p~~~l~-~~~l------------~ 256 (399)
T 1v0j_A 204 YTAWLQNMAA---DHRIEVRLNTDWFDVRGQ------L---R--PGSPAAPVVYTGPLDRYF-DYAE------------G 256 (399)
T ss_dssp HHHHHHHHTC---STTEEEECSCCHHHHHHH------H---T--TTSTTCCEEECSCHHHHT-TTTT------------C
T ss_pred HHHHHHHHHh---cCCeEEEECCchhhhhhh------h---h--hcccCCEEEECCcHHHHH-hhhh------------C
Confidence 9999999986 458999999999999632 2 1 35 799999999987754 3311 1
Q ss_pred hhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCC-CCCeeEEEEEec
Q 008069 464 LYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLA-PEGHHILHIFTI 533 (579)
Q Consensus 464 ~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~a-P~G~~~l~~~~~ 533 (579)
.+.|. +...+.++++.+... + ..++.+++. +.++..+ +..++..|..+ |+++..++....
T Consensus 257 ~l~y~-s~~~~~~~~~~~~~~-~--~~~~~~~~~----~~~~~ri--~~~~~~~~~~~~~~~~~~v~~e~~ 317 (399)
T 1v0j_A 257 RLGWR-TLDFEVEVLPIGDFQ-G--TAVMNYNDL----DVPYTRI--HEFRHFHPERDYPTDKTVIMREYS 317 (399)
T ss_dssp CCCEE-EEEEEEEEESSSCSS-S--SSEEEECCT----TSSCSEE--EEGGGGCTTSCCCSSCEEEEEEEE
T ss_pred CCCcc-eEEEEEEEEccccCC-C--CeEEEeCCC----CCCccee--EeecCCCCCCcCCCCCeEEEEeec
Confidence 22232 334667788764322 1 223333321 1233222 33345556766 667777776654
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.68 E-value=5.8e-17 Score=169.34 Aligned_cols=253 Identities=16% Similarity=0.138 Sum_probs=157.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeec-cccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFD-VGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~-~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
+||+|||||++||++|+.|+++|++|+|+|+.+.+||.+.+....|+.++ .|++.+... ...+.++++++|...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~-----~~~~~~~~~~l~~~~ 76 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTN-----DKYIWDYVNDLVEFN 76 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEES-----CHHHHHHHHTTSCBC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCC-----CHHHHHHHHHhhhhh
Confidence 79999999999999999999999999999999999999999888999994 999998752 234667888887532
Q ss_pred eEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcChh
Q 008069 237 EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPL 316 (579)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (579)
... . ... ...+|..+.++.+...+...+... ....+.+++.... .. .
T Consensus 77 ~~~-~-~~~--~~~~g~~~~~p~~~~~~~~l~~~~---~~~~~~~~l~~~~------~~-----~--------------- 123 (367)
T 1i8t_A 77 RFT-N-SPL--AIYKDKLFNLPFNMNTFHQMWGVK---DPQEAQNIINAQK------KK-----Y--------------- 123 (367)
T ss_dssp CCC-C-CCE--EEETTEEEESSBSHHHHHHHHCCC---CHHHHHHHHHHHT------TT-----T---------------
T ss_pred hcc-c-cce--EEECCeEEEcCCCHHHHHHHhccC---CHHHHHHHHHHHh------hc-----c---------------
Confidence 111 1 111 223566666666654332211111 1111111211100 00 0
Q ss_pred hhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHH-H---h-hhhcCccc--eeCCChHHHH
Q 008069 317 ECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMV-L---C-DRHFGGIN--YPVGGVGGIA 389 (579)
Q Consensus 317 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~g~~--~p~gG~~~l~ 389 (579)
......++.+++.+.+.++....++...+....+.++.+.++...... . . ..+..+.+ +|+||++.++
T Consensus 124 -----~~~~~~s~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~ 198 (367)
T 1i8t_A 124 -----GDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLI 198 (367)
T ss_dssp -----CCCCCCSHHHHHHHHHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHH
T ss_pred -----CCCCCccHHHHHHHHHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHH
Confidence 001235677777776666555566655544444566666665432100 0 0 01112323 8999999999
Q ss_pred HHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCC
Q 008069 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAP 469 (579)
Q Consensus 390 ~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~ 469 (579)
++|++ |++|++|++|++|.. + | ++.+|.||+|+++..++...++ .+.|.
T Consensus 199 ~~l~~-----g~~i~l~~~V~~i~~---~---v------~~~~D~VV~a~p~~~~~~~~l~-------------~l~y~- 247 (367)
T 1i8t_A 199 EKMLE-----GVDVKLGIDFLKDKD---S---L------ASKAHRIIYTGPIDQYFDYRFG-------------ALEYR- 247 (367)
T ss_dssp HHHHT-----TSEEECSCCGGGSHH---H---H------HTTEEEEEECSCHHHHTTTTTC-------------CCCEE-
T ss_pred HHHhc-----CCEEEeCCceeeech---h---h------hccCCEEEEeccHHHHHHHhhC-------------CCCCc-
Confidence 99876 689999999998852 1 2 2468999999998775432221 22333
Q ss_pred CeEEEEEeecCCcCC
Q 008069 470 SFLSIHMGVKAEVLP 484 (579)
Q Consensus 470 s~~~v~lg~~~~~~~ 484 (579)
+...++++++.+.++
T Consensus 248 s~~~v~~~~d~~~~~ 262 (367)
T 1i8t_A 248 SLKFETERHEFPNFQ 262 (367)
T ss_dssp EEEEEEEEESSSCSS
T ss_pred eEEEEEEEeccccCC
Confidence 345677888876543
No 32
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.68 E-value=2.7e-16 Score=175.11 Aligned_cols=108 Identities=11% Similarity=-0.083 Sum_probs=81.0
Q ss_pred CccceeCCChHHHHHHHHHHHHHcCceEEeCceee--EEEEeCCE-------EEEE-EeCCCc--EEEcCEEEECCChhH
Q 008069 376 GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVT--KVILEQGK-------AVGV-RLSDGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 376 ~g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~--~I~~~~~~-------v~gV-~~~dG~--~i~Ad~VV~a~~~~~ 443 (579)
...+.+.||++.|+++|++.+.+ |+.|+++++|+ +|..++++ |+ | ...+|+ +++||.||+|+++..
T Consensus 337 ~~~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~-V~~~~~G~~~~~~aD~VIvTvP~~~ 414 (721)
T 3ayj_A 337 NEYTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQL-LSYDSHNAVHSEAYDFVILAVPHDQ 414 (721)
T ss_dssp CEECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEE-EEEETTCCEEEEEESEEEECSCHHH
T ss_pred cceeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEE-EEEecCCceEEEEcCEEEECCCHHH
Confidence 35678999999999999998754 67899999999 99986433 54 5 456777 799999999999876
Q ss_pred HHh-----hcc----------------------CCCCC-C-------hHHHHHHHhhccCCCeEEEEEee-----cCCcC
Q 008069 444 TFG-----KLL----------------------KGEQL-P-------KEEENFQKLYVKAPSFLSIHMGV-----KAEVL 483 (579)
Q Consensus 444 ~~~-----~Ll----------------------~~~~l-p-------~~~~~~~~~~~~~~s~~~v~lg~-----~~~~~ 483 (579)
+.. .+- .++.+ | ...++++++..+..+. +|++.+ ++++|
T Consensus 415 L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~-Kv~l~~~~~~~~~~fW 493 (721)
T 3ayj_A 415 LTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSS-KVFATVKTAALDQPWV 493 (721)
T ss_dssp HHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEE-EEEEEEEGGGGGSTTS
T ss_pred HhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccce-EEEEEEccccCCCCcc
Confidence 521 121 12225 7 7777888888776654 999999 88887
Q ss_pred CCC
Q 008069 484 PPD 486 (579)
Q Consensus 484 ~~~ 486 (579)
..+
T Consensus 494 ~~~ 496 (721)
T 3ayj_A 494 PQW 496 (721)
T ss_dssp CEE
T ss_pred ccc
Confidence 644
No 33
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.65 E-value=5.1e-14 Score=144.49 Aligned_cols=159 Identities=9% Similarity=0.074 Sum_probs=96.4
Q ss_pred ceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEE-cCEEEECCChhHHHhhccCCCCCChH
Q 008069 379 NYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFY-AKTIISNATRWDTFGKLLKGEQLPKE 457 (579)
Q Consensus 379 ~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~-Ad~VV~a~~~~~~~~~Ll~~~~lp~~ 457 (579)
+....|+..+.+.+.+ |++|+++++|++|..+++++. |++.+|+.+. +|.||+|+|+..+. +++.. .| .
T Consensus 103 ~~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~a~~vV~a~g~~~~~-~~~~~--~~-~ 172 (336)
T 1yvv_A 103 WVGKPGMSAITRAMRG-----DMPVSFSCRITEVFRGEEHWN-LLDAEGQNHGPFSHVIIATPAPQAS-TLLAA--AP-K 172 (336)
T ss_dssp EEESSCTHHHHHHHHT-----TCCEECSCCEEEEEECSSCEE-EEETTSCEEEEESEEEECSCHHHHG-GGGTT--CH-H
T ss_pred EEcCccHHHHHHHHHc-----cCcEEecCEEEEEEEeCCEEE-EEeCCCcCccccCEEEEcCCHHHHH-Hhhcc--CH-H
Confidence 3445677777776654 789999999999998888776 8888998664 99999999998875 45543 23 3
Q ss_pred HHHHHHhhccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEeccchh
Q 008069 458 EENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIE 537 (579)
Q Consensus 458 ~~~~~~~~~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~~~~ 537 (579)
....+..+.+. +..+++++++.+.+.+ ...+++. ..|..+++. .+. .|...+.|...+......+..
T Consensus 173 l~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~l~~--~~~-~p~~~~~~~~~v~~~~~~~~~ 239 (336)
T 1yvv_A 173 LASVVAGVKMD-PTWAVALAFETPLQTP---MQGCFVQ------DSPLDWLAR--NRS-KPERDDTLDTWILHATSQWSR 239 (336)
T ss_dssp HHHHHTTCCEE-EEEEEEEEESSCCSCC---CCEEEEC------SSSEEEEEE--GGG-STTCCCSSEEEEEEECHHHHH
T ss_pred HHHHHhhcCcc-ceeEEEEEecCCCCCC---CCeEEeC------CCceeEEEe--cCc-CCCCCCCCcEEEEEeCHHHHH
Confidence 34445555555 5678899998875432 1233332 134333322 121 133334333333332222222
Q ss_pred hhcCCChhhHHHHHHHHHHHHHHHHHHhhCC
Q 008069 538 DWEGLAQKDYDAKKELVADEIINRLENKLFP 568 (579)
Q Consensus 538 ~w~~~~~~~y~~~ke~~~~~il~~le~~~~P 568 (579)
.+..+ ..+++.+.+++.+. +.++
T Consensus 240 ~~~~~-------~~~~~~~~l~~~l~-~~lg 262 (336)
T 1yvv_A 240 QNLDA-------SREQVIEHLHGAFA-ELID 262 (336)
T ss_dssp HTTTS-------CHHHHHHHHHHHHH-TTCS
T ss_pred HHHhC-------CHHHHHHHHHHHHH-HHhC
Confidence 23222 23678888889998 6654
No 34
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.65 E-value=4.3e-16 Score=163.69 Aligned_cols=226 Identities=15% Similarity=0.128 Sum_probs=148.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEee--CCeee-ccccccccCCCCCCChHHHHHHHHHcC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER--DGYTF-DVGSSVMFGFSDKGNLNLITQALAAVG 233 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~--~g~~~-~~G~~~~~g~~~~~~~~~~~~~l~~~g 233 (579)
++||+|||||++|+++|+.|+++|++|+|+|+.+.+||++.+... .|+.+ +.|++++.. ....+.++++++|
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~-----~~~~~~~~~~~l~ 77 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT-----DNETVWNYVNKHA 77 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE-----SCHHHHHHHHTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECC-----CCHHHHHHHHHHh
Confidence 479999999999999999999999999999999999999999887 79886 999999874 2245678888888
Q ss_pred CceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCc--HHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhh
Q 008069 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHE--KEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQF 311 (579)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~--~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (579)
.. . +..... +...+|..+.++.+...+.. .+... ...+.+++.. .
T Consensus 78 ~~-~--~~~~~~-~~~~~g~~~~~P~~~~~~~~----l~~~~~~~~~~~~~l~~-------~------------------ 124 (384)
T 2bi7_A 78 EM-M--PYVNRV-KATVNGQVFSLPINLHTINQ----FFSKTCSPDEARALIAE-------K------------------ 124 (384)
T ss_dssp CE-E--ECCCCE-EEEETTEEEEESCCHHHHHH----HTTCCCCHHHHHHHHHH-------H------------------
T ss_pred hh-c--ccccce-EEEECCEEEECCCChhHHHH----HhcccCCHHHHHHHHHH-------h------------------
Confidence 52 2 111111 22345666677666544322 22111 1111111110 0
Q ss_pred hcChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHH-----Hhhhhc-Cccc-eeCCC
Q 008069 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMV-----LCDRHF-GGIN-YPVGG 384 (579)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~g~~-~p~gG 384 (579)
.... .....++.+++.+.+.++....++........+.++.+.++...... ....+. +.+. +|+||
T Consensus 125 ~~~~-------~~~~~sl~e~~~~~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG 197 (384)
T 2bi7_A 125 GDST-------IADPQTFEEEALRFIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCG 197 (384)
T ss_dssp SCCS-------CSSCCBHHHHHHHHHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTH
T ss_pred hhcc-------CCCCcCHHHHHHHhhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcC
Confidence 0000 01245778888877776666666665555555566666665432100 001111 2332 99999
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceee-EEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHh
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVT-KVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFG 446 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~-~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~ 446 (579)
++.++++|++ +.|++|+++++|+ +|.. .+|.||+|+++..++.
T Consensus 198 ~~~l~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~~~~~~ 241 (384)
T 2bi7_A 198 YTQMIKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGPLDAFYG 241 (384)
T ss_dssp HHHHHHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSCHHHHTT
T ss_pred HHHHHHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCCHHHHHH
Confidence 9999999876 3589999999999 7742 2999999999987654
No 35
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.64 E-value=1.9e-15 Score=158.52 Aligned_cols=293 Identities=13% Similarity=0.094 Sum_probs=177.2
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEe-eCCeee-ccccccccCCCCCCChHHHHHHHHHc
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE-RDGYTF-DVGSSVMFGFSDKGNLNLITQALAAV 232 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~-~~g~~~-~~G~~~~~g~~~~~~~~~~~~~l~~~ 232 (579)
...+||+|||||++||++|+.|+++|.+|+|+|+.+.+||.+.+.. .+|+.+ +.|++.+.. ....+.++++++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~-----~~~~~~~~~~~~ 101 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHT-----NSKDVFEYLSRF 101 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEE-----SCHHHHHHHHTS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCC-----ChHHHHHHHHHh
Confidence 3569999999999999999999999999999999999999998876 688874 999999874 234678889998
Q ss_pred CCceeEeeCCCeEEEEcCCCceEEecCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhh
Q 008069 233 GCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (579)
Q Consensus 233 g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~i~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (579)
|... +.... .+.+.+|..+.++.....+.. +... +........++.. ..
T Consensus 102 ~~~~---~~~~~-~~~~~~g~l~~lP~~~~~~~~-l~~~-~~~~~~~~~~l~~-------------~~------------ 150 (397)
T 3hdq_A 102 TEWR---PYQHR-VLASVDGQLLPIPINLDTVNR-LYGL-NLTSFQVEEFFAS-------------VA------------ 150 (397)
T ss_dssp CCEE---ECCCB-EEEEETTEEEEESCCHHHHHH-HHTC-CCCHHHHHHHHHH-------------HC------------
T ss_pred hhcc---ccccc-ceEEECCEEEEcCCChHHHHH-hhcc-CCCHHHHHHHHhh-------------cc------------
Confidence 8422 11111 222346777777766543321 1110 1111111111110 00
Q ss_pred cChhhhhHHhhhccccHHHHHHHhcCCHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHh-----hhh-cCcc-ceeCCCh
Q 008069 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC-----DRH-FGGI-NYPVGGV 385 (579)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~g~-~~p~gG~ 385 (579)
.......++.+++.+.+..+....++...+....+.++.+.++........ ..+ .+.. .+|+||.
T Consensus 151 --------~~~~~~~s~~e~~~~~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy 222 (397)
T 3hdq_A 151 --------EKVEQVRTSEDVVVSKVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGY 222 (397)
T ss_dssp --------CCCSSCCBHHHHHHHHHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCH
T ss_pred --------cCCCCCcCHHHHHHHhcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCH
Confidence 001124577888888777777777777776666667777776543221100 001 1122 3799999
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLY 465 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~ 465 (579)
.++.++|++ ..|++|++|++|+++ +.++.+|.||+|.++...+...++ ++
T Consensus 223 ~~l~e~l~~---~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~~~~~~g-------------~L 272 (397)
T 3hdq_A 223 TRMFQNMLS---SPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAFFDFCYG-------------KL 272 (397)
T ss_dssp HHHHHHHTC---STTEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHHTTTTTC-------------CC
T ss_pred HHHHHHHHh---ccCCEEEECCeEEec--------------cccccCCEEEEcCCHHHHHHHhcC-------------CC
Confidence 999988854 459999999999732 445679999998886544321111 12
Q ss_pred ccCCCeEEEEEeecCCcCCCCCCccceeeccchhhhcCCcceEEEEcCCCCCCCCCCCCeeEEEEEecc
Q 008069 466 VKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTIC 534 (579)
Q Consensus 466 ~~~~s~~~v~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~s~~dp~~aP~G~~~l~~~~~~ 534 (579)
.+. |...++++++.+...+ .+++.++++ + |+.-| ..+++. +.. +.+++++..-.+.
T Consensus 273 ~yr-sl~~~~~~~~~~~~~~---~~~vn~~d~----~-p~tRi--~e~k~~-~~~-~~~~t~i~~Ey~~ 328 (397)
T 3hdq_A 273 PYR-SLEFRHETHDTEQLLP---TGTVNYPND----Y-AYTRV--SEFKHI-TGQ-RHHQTSVVYEYPR 328 (397)
T ss_dssp CEE-EEEEEEEEESSSCSCS---SSEEECSSS----S-SCSEE--EEHHHH-HCC-CCSSEEEEEEEEE
T ss_pred CCc-eEEEEEEEeccccCCC---CeEEEeCCC----C-cceEE--Eeeccc-CCC-CCCCEEEEEEECC
Confidence 222 4456788888654332 234444431 3 55433 211221 111 3466777665553
No 36
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.63 E-value=1e-14 Score=151.77 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=69.8
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecC-CCCCcceeEEe----------eCCeeeccccccccCCCCCCChH
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY-VIPGGSSGYYE----------RDGYTFDVGSSVMFGFSDKGNLN 223 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~-~~~gg~~~t~~----------~~g~~~~~G~~~~~g~~~~~~~~ 223 (579)
...+||+|||||++||++|+.|+++|++|+|||+. +.+||++.++. .+|+.++.|++++.. ...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~-----~~~ 116 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS-----FHP 116 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET-----TCH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc-----hHH
Confidence 35689999999999999999999999999999999 99999999887 358899999988753 345
Q ss_pred HHHHHHHHcCCceeEee
Q 008069 224 LITQALAAVGCEMEVIP 240 (579)
Q Consensus 224 ~~~~~l~~~g~~~~~~~ 240 (579)
.+.++++++|+......
T Consensus 117 ~~~~~~~~lGl~~~~~~ 133 (376)
T 2e1m_A 117 LTLALIDKLGLKRRLFF 133 (376)
T ss_dssp HHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHcCCCcceee
Confidence 67899999998876543
No 37
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.46 E-value=1.5e-12 Score=138.80 Aligned_cols=72 Identities=19% Similarity=0.246 Sum_probs=62.2
Q ss_pred ccceeCC-C---hHHHHHHHHHHHHHcCceEEeCc---eeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhcc
Q 008069 377 GINYPVG-G---VGGIAKSLAKGLADKGSEILYKA---NVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 377 g~~~p~g-G---~~~l~~aL~~~l~~~G~~I~l~~---~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
+++.+.+ | ...+..+|.+.++++|++|++++ +|++|..+++++++|++.+|++++||.||+|+|.+.. .|+
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~--~l~ 225 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG--QFL 225 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG--GTS
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh--hhc
Confidence 4555665 5 46889999999999999999999 9999999999999999999988999999999999863 455
Q ss_pred C
Q 008069 450 K 450 (579)
Q Consensus 450 ~ 450 (579)
+
T Consensus 226 ~ 226 (438)
T 3dje_A 226 D 226 (438)
T ss_dssp C
T ss_pred C
Confidence 4
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=3.2e-12 Score=132.36 Aligned_cols=68 Identities=7% Similarity=0.174 Sum_probs=55.7
Q ss_pred ccceeCCC---hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCC--cEEEcCEEEECCChhHH
Q 008069 377 GINYPVGG---VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATRWDT 444 (579)
Q Consensus 377 g~~~p~gG---~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG--~~i~Ad~VV~a~~~~~~ 444 (579)
+.+.+.+| ...+..+|.+.++++|++|+++++|++|..+++++..|.+.+| .+++||.||+|+|.|..
T Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 138 ALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred eeECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 34444444 3688999999999999999999999999988766344888888 37999999999999963
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.38 E-value=1.3e-12 Score=136.16 Aligned_cols=67 Identities=18% Similarity=0.391 Sum_probs=56.9
Q ss_pred CccceeCCC---hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 376 GGINYPVGG---VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 376 ~g~~~p~gG---~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
++.+++.+| ...++.+|.+.++++|++|+++++|++|..++++ ++|++.+| +++||.||+|+|.|..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 141 GATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGGHH
T ss_pred EEEEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChhHH
Confidence 455566555 3689999999999999999999999999998887 45888887 7999999999999863
No 40
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.37 E-value=1.5e-11 Score=138.52 Aligned_cols=67 Identities=13% Similarity=0.248 Sum_probs=58.5
Q ss_pred CccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 376 ~g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
++.+++.+|. ..++.+|.+.+++.|++|+++++|++|..+++++ +|++.+|.++.||.||+|+|.+.
T Consensus 404 gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 404 SGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred CcEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeE-EEEECCCCEEECCEEEECCCcch
Confidence 4556666663 7899999999999999999999999999998886 58888888899999999999985
No 41
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.36 E-value=5.1e-12 Score=132.01 Aligned_cols=66 Identities=17% Similarity=0.312 Sum_probs=56.9
Q ss_pred ccceeCCC---hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 377 GINYPVGG---VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 377 g~~~p~gG---~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+.+.+| ...+...|.+.+++.|++|+++++|++|..+++++.+|++.+| +++||.||+|+|.+.
T Consensus 137 ~~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 137 ASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp EEEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred EEEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 34455555 3688899999999999999999999999998888888988888 799999999999986
No 42
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.36 E-value=6.6e-12 Score=136.77 Aligned_cols=60 Identities=18% Similarity=0.342 Sum_probs=51.4
Q ss_pred ChHHHHHHHHHHHHHcCceEEeCceeeEEEEe-CCEEEEEEeCC-Cc--EEEcC-EEEECCChhH
Q 008069 384 GVGGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRLSD-GR--EFYAK-TIISNATRWD 443 (579)
Q Consensus 384 G~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~-~~~v~gV~~~d-G~--~i~Ad-~VV~a~~~~~ 443 (579)
|...+...|.+.+++.|++|+++++|++|..+ +++++||++.+ |+ +++|| .||+|+|.+.
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 44489999999999999999999999999998 68999988754 33 58995 9999999875
No 43
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.33 E-value=1.1e-11 Score=131.38 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=55.6
Q ss_pred ccceeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 377 GINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 377 g~~~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+..++......+.+.|.+.+++.|++|+++++|++|..+++++. |.+.+| +++||.||+|+|.+.
T Consensus 123 g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~-V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 123 GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFR-VTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEE-EEETTE-EEEESEEEECCCCSS
T ss_pred CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEE-EEECCc-EEEeeEEEECCCCcc
Confidence 34455566778999999999999999999999999998887754 888888 799999999999875
No 44
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.31 E-value=9.1e-11 Score=129.48 Aligned_cols=58 Identities=19% Similarity=0.334 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeC-CEEEEEEeC--CCc--EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS--DGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~-~~v~gV~~~--dG~--~i~Ad~VV~a~~~~~ 443 (579)
..+...|.+.+++.|++|+++++|++|..++ ++++||++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 5788999999999999999999999999887 888888775 675 589999999999765
No 45
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.31 E-value=6.2e-12 Score=141.97 Aligned_cols=67 Identities=16% Similarity=0.261 Sum_probs=57.6
Q ss_pred CccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc-EEEcCEEEECCChhH
Q 008069 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR-EFYAKTIISNATRWD 443 (579)
Q Consensus 376 ~g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~-~i~Ad~VV~a~~~~~ 443 (579)
++.+++.+|. ..++.+|.+.+++.|++|+++++|++|..+++++ .|++.+|+ +++||.||+|+|.+.
T Consensus 399 gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 399 DGIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred ceEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 4666777764 7899999999999999999999999999988876 58888887 799999999999985
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.31 E-value=9e-12 Score=131.07 Aligned_cols=66 Identities=21% Similarity=0.323 Sum_probs=57.0
Q ss_pred ccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 377 g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+++.+|. ..+.+.|.+.+++.|++|+++++|++|..+++++++|++.+| ++.||.||+|+|.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 162 ATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp EEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 445555554 488899999999999999999999999988888888988888 699999999999986
No 47
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.30 E-value=3.7e-11 Score=132.56 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeC-CEEEEEEeC--CCc--EEEcCEEEECCChhHH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS--DGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~-~~v~gV~~~--dG~--~i~Ad~VV~a~~~~~~ 444 (579)
...+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ +++||.||+|+|.+..
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 35788999999999999999999999999988 888888775 675 5899999999998764
No 48
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.29 E-value=5.1e-11 Score=131.57 Aligned_cols=58 Identities=10% Similarity=0.170 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeC-CEEEEEEeC--CCc--EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS--DGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~-~~v~gV~~~--dG~--~i~Ad~VV~a~~~~~ 443 (579)
..+...|.+.+++.|++|+++++|++|..++ ++++||++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 5788999999999999999999999999887 888888775 675 689999999999865
No 49
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.25 E-value=5.1e-11 Score=127.51 Aligned_cols=65 Identities=20% Similarity=0.300 Sum_probs=56.6
Q ss_pred ceeCC-ChHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 379 NYPVG-GVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 379 ~~p~g-G~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+|.. ....+.+.|.+.+++.|++|+++++|++|..+++++.+|++.+|++++||.||+|+|.+.
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 34432 356888999999999999999999999999888888889999998899999999999876
No 50
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.24 E-value=3.4e-11 Score=125.15 Aligned_cols=70 Identities=23% Similarity=0.327 Sum_probs=56.9
Q ss_pred ccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccC
Q 008069 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 377 g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
+++.+.+|. ..+...|.+.+++.|++|+.+++|++|..+++++. |++.+|+ ++||.||+|+|+|.. .|++
T Consensus 137 ~~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~-v~~~~g~-~~a~~vV~a~G~~s~--~l~~ 209 (372)
T 2uzz_A 137 GLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVT-IETADGE-YQAKKAIVCAGTWVK--DLLP 209 (372)
T ss_dssp EEEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE-EEESSCE-EEEEEEEECCGGGGG--GTST
T ss_pred EEEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEE-EEECCCe-EEcCEEEEcCCccHH--hhcc
Confidence 445555553 58889999999999999999999999998777654 7787774 999999999999863 5554
No 51
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.23 E-value=1e-11 Score=136.75 Aligned_cols=58 Identities=29% Similarity=0.483 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC---C--cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G--~~i~Ad~VV~a~~~~~ 443 (579)
..++.+|++.++++|++|+++++|++|..+++++++|++.| | .+++||.||+|+|+|.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 68899999999999999999999999999999998898764 4 3689999999999997
No 52
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.22 E-value=8.7e-11 Score=135.38 Aligned_cols=68 Identities=26% Similarity=0.423 Sum_probs=58.6
Q ss_pred CccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 376 ~g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
++++.+.+|. ..++.+|.+.++++|++|+++++|++|..+++++++|.+.+| +++||.||+|+|.|..
T Consensus 138 gg~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 138 GGLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGA 208 (830)
T ss_dssp EEEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred EEEEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchH
Confidence 3455555553 588999999999999999999999999998898888988888 7999999999999874
No 53
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.22 E-value=4.1e-10 Score=118.26 Aligned_cols=65 Identities=18% Similarity=0.289 Sum_probs=53.7
Q ss_pred ccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 377 g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+.+.+|. ..+...|.+.+++.|++|+++++|++|..+++++. |++.+| +++||.||+|+|.+.
T Consensus 141 ~~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~-v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 141 GFLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVS-VTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp EEEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEE-EEESSC-EEEEEEEEECCGGGH
T ss_pred EEEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEE-EEECCC-EEEcCEEEEcCCcCh
Confidence 444555543 57888999999999999999999999998888765 777666 699999999999984
No 54
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.21 E-value=2.1e-10 Score=120.12 Aligned_cols=64 Identities=27% Similarity=0.345 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe---CCCcEEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGREFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~---~dG~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+...|.+.+++.|++|+++++|++|..+++++.+|++ .++.+++||.||.|.|.+..+.+.++
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g 169 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAG 169 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcC
Confidence 56678888888899999999999999999999888877 35568999999999999887666654
No 55
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.20 E-value=1.8e-11 Score=127.69 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=56.3
Q ss_pred CccceeCCCh---HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 376 ~g~~~p~gG~---~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
++.+++.+|. ..+.+.|.+.+++.|++|+++++|++|..+++++ +|++.+| +++||.||+|+|.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 151 GASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp EEEEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEETTE-EEEEEEEEECCGGGTH
T ss_pred eEEEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEcCCc-eEEcCEEEECCChhHH
Confidence 3455666553 6789999999999999999999999999887777 6888777 7999999999999753
No 56
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.19 E-value=1.1e-10 Score=123.16 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=51.0
Q ss_pred eeCCChHHHHHHHHHHHHHcCceEEeCceeeEEEEe----CCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 380 YPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILE----QGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 380 ~p~gG~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~----~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+|......+.+.|.+.+++.|++|+++++|++|..+ ++++ .|++.+| +++||.||+|+|.+.
T Consensus 103 ~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 103 FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCSS
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCcc
Confidence 343345678889999999999999999999999976 5554 4777777 799999999999876
No 57
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.17 E-value=3.9e-10 Score=122.98 Aligned_cols=58 Identities=21% Similarity=0.401 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.|.+.+++.|++|+++++|++|..+++++.+|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4678889999999999999999999999988889999999999999999999999876
No 58
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.17 E-value=5.2e-10 Score=116.85 Aligned_cols=57 Identities=12% Similarity=0.333 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++.|++|+++++|++|..+++++. |++.+| +++||.||+|+|.+..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVK-IETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEE-EEETTE-EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEE-EEeCCC-EEEeCEEEEecCccHH
Confidence 68889999999999999999999999998777654 777666 6999999999999863
No 59
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.17 E-value=3.2e-12 Score=138.76 Aligned_cols=105 Identities=17% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCccccccccccCCCCCCC-----CCCC-CCCCccccccccccccchhhhhccccccccceeecCCC---------cCCC
Q 008069 88 FKPRYEKSSLFSGDSLKSS-----NFNG-STLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGN---------EGMS 152 (579)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 152 (579)
+++++.+++.....+|.+| +||. +.+|+..|...+ -.++.+...++..+.......+.. ....
T Consensus 10 ~~~~~~~a~~~~~~~~~~~~~~~rvc~~~~~l~~~~g~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (497)
T 2bry_A 10 ASPASTNPAHDHFETFVQAQLCQDVLSSFQGLCRALGVESG--GGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQG 87 (497)
T ss_dssp -----CCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCTT--CHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGG
T ss_pred ccccHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCCCC--CCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCc
Confidence 3677788888888887777 8887 778999997632 356667767666555332221111 1111
Q ss_pred CCCCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCc
Q 008069 153 RGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (579)
Q Consensus 153 ~~~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (579)
.....+||+|||||++||++|..|++.|++|+|+|+.+.+|+
T Consensus 88 ~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 88 QACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 234568999999999999999999999999999999987764
No 60
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.16 E-value=4.8e-11 Score=127.60 Aligned_cols=58 Identities=21% Similarity=0.365 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEE---------------eCCEEEEEEeCCCcEE--EcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVIL---------------EQGKAVGVRLSDGREF--YAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~---------------~~~~v~gV~~~dG~~i--~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.++++|++|+++++|++|.. +++++++|++.+| ++ .||.||+|+|+|..
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 58899999999999999999999999998 6677778988888 58 99999999999864
No 61
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.14 E-value=4.2e-11 Score=116.90 Aligned_cols=58 Identities=29% Similarity=0.440 Sum_probs=54.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeecccccccc
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMF 214 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~ 214 (579)
++||+|||||++||+||+.|+++|++|+||||.+.+||++.+...++..+|.|+..+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 4899999999999999999999999999999999999999999999999998876654
No 62
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.13 E-value=3.7e-10 Score=117.75 Aligned_cols=64 Identities=27% Similarity=0.374 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC-CCc--EEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-DGR--EFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~-dG~--~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+-..|.+.+++.|++++++++|+.+..+++++.+|... +|+ +++||.||.|-|....+.+.++
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g 169 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAG 169 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcC
Confidence 556677888888999999999999999999988877653 333 5899999999999887766554
No 63
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.13 E-value=8.7e-10 Score=121.53 Aligned_cols=59 Identities=22% Similarity=0.344 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC---CCc--EEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~---dG~--~i~Ad~VV~a~~~~~~ 444 (579)
..++..+++.++++|++|+.+++|++|..+++++++|++. +|+ +++||.||+|+|+|..
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 5788889999999999999999999999998888888863 343 6999999999999963
No 64
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.13 E-value=7.6e-10 Score=117.00 Aligned_cols=65 Identities=22% Similarity=0.321 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEE-EEEEeCCCc--EEEcCEEEECCChhHHHhhccC
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKA-VGVRLSDGR--EFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v-~gV~~~dG~--~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
..+...|.+.+++.|++|+.+++|++|..+++++ ..|.+.+|+ +++||.||.|+|.+..+.++++
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 3667788888888899999999999999887654 446678887 6999999999999887666665
No 65
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.12 E-value=4.8e-10 Score=118.20 Aligned_cols=61 Identities=10% Similarity=0.185 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhcc
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
..+.+.|.+.+++ ++|+++++|++|..+++++. |++.+|++++||.||.|.|.+..+.+.+
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 3566777777766 89999999999999988876 8889999999999999999987766655
No 66
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.12 E-value=2.5e-11 Score=136.97 Aligned_cols=141 Identities=18% Similarity=0.125 Sum_probs=103.3
Q ss_pred ccccccccccCcceEEeecccchhhhhhhhhccccccccccCCCCCcccccccccccccccccccccccccccccCCccc
Q 008069 13 LNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRY 92 (579)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (579)
+.+...++.+.++|||...++++|+.++++..-+..|+ ..+.|+++++|.|
T Consensus 283 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~-----------------------------v~~gR~~~~~P~~ 333 (690)
T 3k30_A 283 EEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDL-----------------------------IGAARPSIADPFL 333 (690)
T ss_dssp HHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSE-----------------------------EEESHHHHHCTTH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcce-----------------------------EEEcHHhHhCccH
Confidence 35677899999999999999999999999999999999 9999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCccc--------cccccccccchhhhhccccccccceeecCCCcCCCCCCCCccEEEEC
Q 008069 93 EKSSLFSGDSLKSSNFNGSTLRSED--------LGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIG 164 (579)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG 164 (579)
.++..-.......+|.-+. .|... |..+.. ... .....|.+.........+||+|||
T Consensus 334 ~~~~~~g~~~~i~~c~~c~-~C~~~~~~~~~~~C~vnp~-------------~g~-e~~~~~~~~~~~~~~~~~~VvIIG 398 (690)
T 3k30_A 334 PNKIRDGRLNLIRECIGCN-ICVSGDLTMSPIRCTQNPS-------------MGE-EWRRGWHPERIRAKESDARVLVVG 398 (690)
T ss_dssp HHHHHTTCGGGCCCCCCCC-HHHHHHHTTSCCCCSSCTT-------------TTT-TTTTCCCSSCCCCCSSCCEEEEEC
T ss_pred HHHHHcCCccccccccchh-hhhhcccCCCcccCCcCcc-------------cCc-ccccccCccccCcccccceEEEEC
Confidence 8887666655444422222 24322 221111 000 011112221122234568999999
Q ss_pred CChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 165 SGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 165 ~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
||++||++|..|+++|++|+|+|+.+.+||.+.
T Consensus 399 gG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 399 AGPSGLEAARALGVRGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEecCCCCCCEee
Confidence 999999999999999999999999999999765
No 67
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.10 E-value=2.5e-11 Score=137.68 Aligned_cols=149 Identities=12% Similarity=0.042 Sum_probs=104.2
Q ss_pred ccccccccccCcceEEeecccchhhhhhhhhccccccccccCCCCCcccccccccccccccccccccccccccccCCccc
Q 008069 13 LNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRY 92 (579)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (579)
+.+...++.+.++|||..+++++++.++++..-+..|+ ..+.|+++++|.|
T Consensus 280 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~-----------------------------V~~gR~~l~~P~~ 330 (729)
T 1o94_A 280 IPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADI-----------------------------IGCARPSIADPFL 330 (729)
T ss_dssp HHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSB-----------------------------EEESHHHHHCTTH
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCE-----------------------------EEeCchhhcCchH
Confidence 34567789999999999999999999999999999999 9999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCccccccc-cccccchhhhhccccccccceeecCCCcCCCCCCCCccEEEECCChhHHH
Q 008069 93 EKSSLFSGDSLKSSNFNGSTLRSEDLGCG-ESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLV 171 (579)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~g~~ 171 (579)
.++..-....... .|+. |+. |..+ .. .....+-..+..+.. ....++.+.........+||+|||||++||+
T Consensus 331 ~~~~~~g~~~~~~-~ci~---Cn~-C~~~~~~-~~~~~~C~~n~~~g~-e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~ 403 (729)
T 1o94_A 331 PQKVEQGRYDDIR-VCIG---CNV-CISRWEI-GGPPMICTQNATAGE-EYRRGWHPEKFRQTKNKDSVLIVGAGPSGSE 403 (729)
T ss_dssp HHHHHTTCGGGCC-CCCC---CCH-HHHHHHH-SSSCCCCSSCTTTTT-HHHHCCCTTCCCCCSSCCEEEEECCSHHHHH
T ss_pred HHHHHcCCccccc-cccc---cch-hcccccc-cCCceeeccCccccc-cccccccccccccccCCceEEEECCCHHHHH
Confidence 8776554433333 3542 553 5432 11 011111112222211 1111222211122345689999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCCCccee
Q 008069 172 AATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 172 ~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
+|..|+++|++|+|+|+.+.+||.+.
T Consensus 404 aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 404 AARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp HHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred HHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 99999999999999999999999765
No 68
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.09 E-value=1.8e-09 Score=119.39 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEe-CCEEEEEEe---CCCc--EEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~-~~~v~gV~~---~dG~--~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++.|++|+++++|++|..+ ++++.||.+ .+|+ ++.||.||+|+|.+..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 578889999999999999999999999986 778888875 4665 5899999999998764
No 69
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.09 E-value=3.8e-10 Score=118.63 Aligned_cols=66 Identities=17% Similarity=0.314 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHc-CceEEeCceeeEEEEeCCEEE-EEEeCCCcEEEcCEEEECCChhHHHhhccCC
Q 008069 386 GGIAKSLAKGLADK-GSEILYKANVTKVILEQGKAV-GVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 386 ~~l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~v~-gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~ 451 (579)
..+.+.|.+.+++. |++|+++++|++|..++++++ .|++.+|++++||.||.|.|.+..+.+.++.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~ 174 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLD 174 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSC
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCC
Confidence 46778888899888 999999999999998887773 5888899899999999999999877777653
No 70
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.07 E-value=1.7e-09 Score=113.68 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+.+.|.+.+ .|++|+++++|++|..+++++. |++.+|++++||.||.|.|.+....+++.
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDSETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECSSCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 3444455444 4899999999999998887776 88899989999999999999887766654
No 71
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.05 E-value=2.9e-09 Score=118.90 Aligned_cols=59 Identities=17% Similarity=0.244 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe---CCCc--EEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~---~dG~--~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++.|++|+.+++|++|..+++++.||.+ .+|+ .+.||.||+|+|.+..
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 478899999999999999999999999998898888865 4676 4899999999998764
No 72
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.05 E-value=1.3e-09 Score=120.35 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC-CC--cEEEcCEEEECCChhHHHhhccC
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-DG--REFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~-dG--~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
..+...|.+.+++.|++++.+++|++|..+++.+.+|++. +| .+++||.||.|.|.+..+.+.++
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg 195 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLG 195 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcC
Confidence 4677888888999999999999999999876666678876 67 57999999999999876655554
No 73
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.04 E-value=1.1e-10 Score=131.43 Aligned_cols=143 Identities=17% Similarity=0.072 Sum_probs=98.8
Q ss_pred cccccccccCcceEEeecccchhhhhhhhhccccccccccCCCCCcccccccccccccccccccccccccccccCCcccc
Q 008069 14 NFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYE 93 (579)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (579)
.+...++.+.++|||..+++++++.++++..-+..|+ ..+.|+++.+|.|.
T Consensus 270 ~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~-----------------------------V~~gR~~l~~P~l~ 320 (671)
T 1ps9_A 270 WVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADM-----------------------------VSMARPFLADAELL 320 (671)
T ss_dssp HHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSE-----------------------------EEESTHHHHCTTHH
T ss_pred HHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCE-----------------------------EEeCHHHHhCcHHH
Confidence 3456789999999999999999999999999999999 88999999999998
Q ss_pred ccccccCCCCCCCCCCCCCCCccccccccccccchhhhhccccccccceeecC-CCcCCCCCCCCccEEEECCChhHHHH
Q 008069 94 KSSLFSGDSLKSSNFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIG-GNEGMSRGADDYDAIVIGSGIGGLVA 172 (579)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~viG~g~~g~~~ 172 (579)
++..........+ |+ .|...|.-.......+ .+..+...... ..+. ......+||+|||||++|+++
T Consensus 321 ~k~~~g~~~~~~~-c~---~c~~~C~~~~~~~~~~-------~C~~np~~~~e~~~~~-~~~~~~~~vvIIGgG~AGl~a 388 (671)
T 1ps9_A 321 SKAQSGRADEINT-CI---GCNQACLDQIFVGKVT-------SCLVNPRACHETKMPI-LPAVQKKNLAVVGAGPAGLAF 388 (671)
T ss_dssp HHHHTTCGGGCCC-CC---CCCTTTHHHHHTTCCC-------CCSSCTTTTCTTTSCC-CSCSSCCEEEEECCSHHHHHH
T ss_pred HHHHcCCCCCccc-cc---ccccccchhccCCCce-------EEEeCcccccccccCC-CCCCCCCeEEEECCCHHHHHH
Confidence 7765544333333 43 3444443110000000 01111110000 0011 112346899999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCCCccee
Q 008069 173 ATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 173 a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
|..|++.|++|+|+|+.+.+||...
T Consensus 389 A~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 389 AINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp HHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred HHHHHhCCCeEEEEeCCCCCCCeee
Confidence 9999999999999999999998753
No 74
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.04 E-value=9.2e-10 Score=120.50 Aligned_cols=64 Identities=11% Similarity=0.124 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCC----EEEEEEeCCC---cEEEcCEEEECCChhHHHhhccC
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQG----KAVGVRLSDG---REFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~----~v~gV~~~dG---~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
..+...|.+.+++.|++|+++++|++|..+++ +++ |++.++ .+++||.||.|.|.+..+.+.++
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 36677888889999999999999999999887 766 666665 67999999999999987777774
No 75
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.04 E-value=1.2e-09 Score=116.98 Aligned_cols=65 Identities=23% Similarity=0.280 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC---CCc--EEEcCEEEECCChhHHHhhccCC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~---dG~--~i~Ad~VV~a~~~~~~~~~Ll~~ 451 (579)
.+.+.|.+.+++.|++|+++++|++|..+++++++|++. +|+ +++||.||.|.|.+..+.+.++.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~ 170 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPP 170 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCC
Confidence 567788888888999999999999999999998877764 676 79999999999998877666653
No 76
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.04 E-value=2.7e-09 Score=108.33 Aligned_cols=70 Identities=26% Similarity=0.241 Sum_probs=54.4
Q ss_pred chhhhhccccccccceeecCCCcCCCC-------------------CCCCccEEEECCChhHHHHHHHHHHc--CCcEEE
Q 008069 127 RDFALMAKTVMSVDNLVEIGGNEGMSR-------------------GADDYDAIVIGSGIGGLVAATQLAVK--GARVLV 185 (579)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~v~viG~g~~g~~~a~~l~~~--g~~v~~ 185 (579)
.+.++.+++++.+.+....|....... ....+||+|||||++|+++|+.|+++ |++|+|
T Consensus 16 ~v~~~~~er~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v 95 (326)
T 2gjc_A 16 HLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCI 95 (326)
T ss_dssp CGGGSCCCCTTTTTCCSTTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEE
T ss_pred ccchHHHHHHHHHHHHhcCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEE
Confidence 466777888888877777774432111 12346999999999999999999998 999999
Q ss_pred EecCCCCCcce
Q 008069 186 LEKYVIPGGSS 196 (579)
Q Consensus 186 ~e~~~~~gg~~ 196 (579)
+|+.+.+||.+
T Consensus 96 ~e~~~~~ggg~ 106 (326)
T 2gjc_A 96 IESSVAPGGGS 106 (326)
T ss_dssp ECSSSSCCTTT
T ss_pred EecCccccccc
Confidence 99999988743
No 77
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.03 E-value=2.7e-09 Score=115.72 Aligned_cols=63 Identities=11% Similarity=0.059 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc---EEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR---EFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~---~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+...|.+.+++.|++|+++++|++|..++++++ |++.+|+ +++||.||.|.|.+..+.++++
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 5677788888889999999999999999888876 7776664 7999999999999988877775
No 78
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.02 E-value=2.4e-09 Score=107.28 Aligned_cols=56 Identities=13% Similarity=0.159 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHH-cCceEEeCceeeEEEEeCCEEEEEEeC---------CC-----cEEEcCEEEECCChh
Q 008069 387 GIAKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLS---------DG-----REFYAKTIISNATRW 442 (579)
Q Consensus 387 ~l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~v~gV~~~---------dG-----~~i~Ad~VV~a~~~~ 442 (579)
.+...|.+.+.+ .|++++++++|++|..+++++.+|.+. +| .+++||.||+|+|..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 455667777765 699999999999999988888888763 32 469999999999964
No 79
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.00 E-value=6.4e-09 Score=115.30 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe---CCCc--EEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~---~dG~--~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++.|++|+.+++|++|..+++++.||.+ .+|+ .+.|+.||+|+|.+..
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 578889999999999999999999999998899988876 4675 5899999999998764
No 80
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.00 E-value=3.2e-09 Score=115.12 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc---EEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR---EFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~---~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+...|.+.+++.|++|+++++|++|..++++++ |++.+|+ +++||.||.|.|.+..+.+.++
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 5677888888889999999999999998888776 7777765 7999999999999988877775
No 81
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.99 E-value=2.9e-09 Score=115.86 Aligned_cols=64 Identities=22% Similarity=0.342 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe--CCCc--EEEcCEEEECCChhHHHhhcc
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL--SDGR--EFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~--~dG~--~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
..+...|.+.+++.|++|+++++|++|..+++++.+|++ .+|+ +++||.||.|.|.+..+.+.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 367788888899999999999999999999998877765 4574 799999999999987766655
No 82
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.98 E-value=4.3e-09 Score=109.81 Aligned_cols=62 Identities=13% Similarity=0.100 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccCC
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~~ 451 (579)
..+.+.|.+.+++.|++|+++++|++|.. ++ .|++.+|++++||.||.|.|.+....+.+..
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~ 168 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-VG---RLTLQTGEVLEADLIVGADGVGSKVRDSIGF 168 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-TT---EEEETTSCEEECSEEEECCCTTCHHHHHHCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC---EEEECCCCEEEcCEEEECCCccHHHHHHhcC
Confidence 46778888889889999999999999987 44 4778899899999999999998877776653
No 83
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.97 E-value=3.5e-09 Score=114.90 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe---CCCc--EEEcCEEEECCChhHH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~---~dG~--~i~Ad~VV~a~~~~~~ 444 (579)
...+..+|.+.++++|++|+++++|++|..++ ++.+|++ .+|+ +++||.||+|+|+|..
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 36889999999999999999999999999877 5566777 3675 6999999999999974
No 84
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.96 E-value=5.7e-09 Score=115.31 Aligned_cols=61 Identities=18% Similarity=0.290 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeC-CEEEEEEeC------CC---------cEEEcCEEEECCChhHHHh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS------DG---------REFYAKTIISNATRWDTFG 446 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~-~~v~gV~~~------dG---------~~i~Ad~VV~a~~~~~~~~ 446 (579)
..+...|.+.+++.|++|+++++|++|..++ +++.+|++. +| .+++||.||.|.|.+..+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr 220 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLA 220 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHH
Confidence 4778889999999999999999999999876 568888876 33 5799999999999987543
No 85
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.94 E-value=6.2e-09 Score=106.84 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+.+.+.+++.|++++++++|++|..+++++.+|++.+| ++.+|.||+|+|.+.
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 45566667778889999999999999998887665778777 799999999999754
No 86
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.94 E-value=3.9e-09 Score=115.51 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHH-cCceEEeCceeeEEEE-eCC------EEEEEEeC---CCc--EEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLAD-KGSEILYKANVTKVIL-EQG------KAVGVRLS---DGR--EFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~-~G~~I~l~~~V~~I~~-~~~------~v~gV~~~---dG~--~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++ .|++|+++++|++|.. +++ ++.||.+. +|+ ++.||.||+|+|.+..
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 3567778888888 6999999999999998 545 88888774 565 6899999999998764
No 87
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.93 E-value=1.6e-08 Score=111.93 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcC-ceEEeCceeeEEEEeCCEEEEEEe---CCCc--EEEcCEEEECCChhHHH
Q 008069 386 GGIAKSLAKGLADKG-SEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDTF 445 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~v~gV~~---~dG~--~i~Ad~VV~a~~~~~~~ 445 (579)
..+...|.+.+++.| ++|+++++|++|..+++++.||.. .+|+ ++.||.||+|+|.+...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 478889999999899 999999999999999888888754 5676 68999999999987653
No 88
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.92 E-value=2e-09 Score=113.62 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceee---------EEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVT---------KVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~---------~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+...|.+.+++.|++|+++++|+ +|..+++++ +|++.+| +++||.||+|+|++.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 5789999999999999999999999 888777776 6777777 799999999999986
No 89
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.92 E-value=5.1e-09 Score=109.74 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeC-CEEEEEEe-CCCc--EEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRL-SDGR--EFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~-~~v~gV~~-~dG~--~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+.+.|.+.+.+.|++|+++++|++|..++ +.+ .|++ .+|+ +++||.||.|.|.+..+.+.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 566778888888899999999999998754 334 3666 6887 6999999999999887766664
No 90
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.91 E-value=2.2e-09 Score=118.16 Aligned_cols=64 Identities=19% Similarity=0.165 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe--CCC-cEEEcCEEEECCChhHHHhhccC
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL--SDG-REFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~--~dG-~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
..+...|.+.+++.|++|+++++|++|..++++++ |++ .+| ++++||.||.|.|.+..+.++++
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 46777888888888999999999999998877766 666 678 68999999999999988877775
No 91
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.90 E-value=1e-08 Score=104.70 Aligned_cols=41 Identities=34% Similarity=0.591 Sum_probs=37.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHc--CCcEEEEecCCCCCcce
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPGGSS 196 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~gg~~ 196 (579)
..+||+|||||++|+++|+.|+++ |++|+|+|+.+.+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 358999999999999999999997 99999999998887643
No 92
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.90 E-value=5.7e-09 Score=109.69 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+.+.|.+.++ +++|+++++|++|..+++++. |++.+|++++||.||.|.|.+....+.+.
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~vR~~l~ 189 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWT-LTFENKPSETADLVILANGGMSKVRKFVT 189 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECSSSEE-EEETTSCCEEESEEEECSCTTCSCCTTTC
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECCCEEE-EEECCCcEEecCEEEECCCcchhHHhhcc
Confidence 45556665554 368999999999998877765 88889988999999999999877666654
No 93
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.88 E-value=3.9e-08 Score=109.82 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHc-Cc-eEEeCceeeEEEEeCC---EEEEEEe---CCCc--EEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADK-GS-EILYKANVTKVILEQG---KAVGVRL---SDGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~-G~-~I~l~~~V~~I~~~~~---~v~gV~~---~dG~--~i~Ad~VV~a~~~~~ 443 (579)
.+...|.+.+++. |+ +|+.+++|++|..+++ ++.||.. .+|+ ++.|+.||+|+|.+.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4566777777777 99 9999999999998877 8988874 5665 589999999999875
No 94
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.88 E-value=1e-08 Score=112.38 Aligned_cols=52 Identities=31% Similarity=0.459 Sum_probs=43.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeec
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFD 207 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~ 207 (579)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||.......+|...+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~d 71 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCD 71 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeC
Confidence 4689999999999999999999999999999999999986543334454444
No 95
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.88 E-value=8.6e-09 Score=108.77 Aligned_cols=62 Identities=11% Similarity=0.150 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHc-C-ceEEeCceeeEEEEeCCEEEEEEeCC---C--cEEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADK-G-SEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~-G-~~I~l~~~V~~I~~~~~~v~gV~~~d---G--~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+.+.|.+.+++. | ++|+++++|++|.. ++++. |++.+ | ++++||.||.|.|.+....+.+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 5667777777763 6 48999999999988 55555 55554 7 47999999999999988777664
No 96
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.87 E-value=4.2e-08 Score=105.92 Aligned_cols=57 Identities=23% Similarity=0.349 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|..+++++ .|++.+|+++.+|.||+|+|...
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 3567788888999999999999999999877776 58889998999999999999653
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.87 E-value=5e-08 Score=104.95 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC-CcEEEcCEEEECCChhHHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD-GREFYAKTIISNATRWDTF 445 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d-G~~i~Ad~VV~a~~~~~~~ 445 (579)
..+...|.+.+++.|++|+.+++| +|..+++++.+|.+.+ +.++.||.||+|+|.+...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCccc
Confidence 467888888888889999999999 9998889988887642 2357899999999987643
No 98
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.86 E-value=7e-09 Score=113.44 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCc--eEEeCceeeEEEEeCC-EEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADKGS--EILYKANVTKVILEQG-KAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~--~I~l~~~V~~I~~~~~-~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+.+.+.+++.|+ +++++++|+++..+++ +...|++.+|+++.||.||+|+|...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 444555666777787 8999999999998765 23348889999999999999999653
No 99
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.86 E-value=6.5e-09 Score=106.00 Aligned_cols=54 Identities=11% Similarity=0.098 Sum_probs=43.5
Q ss_pred HHHHHHHHHc-CceEEeCceeeEEEEeCCEEEEEEeCC-----CcEEEcCEEEECCChhH
Q 008069 390 KSLAKGLADK-GSEILYKANVTKVILEQGKAVGVRLSD-----GREFYAKTIISNATRWD 443 (579)
Q Consensus 390 ~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~v~gV~~~d-----G~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+. |++++++++|++|..+++++.+|++.+ ++++.+|.||+++|...
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 4455666665 999999999999998887777788765 45799999999999643
No 100
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.86 E-value=5.5e-08 Score=102.78 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
...+.+.+.+.++++|++|+++++|++|..+++++.+|++++|+++.+|.||+++|...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 35778888999999999999999999999888888889999999999999999999654
No 101
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.85 E-value=1.5e-08 Score=106.15 Aligned_cols=51 Identities=8% Similarity=0.109 Sum_probs=41.7
Q ss_pred CceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccC
Q 008069 400 GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 400 G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
+.+|+++++|++++..++....|+++||++++||.||-|-|......+.+.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 173 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYL 173 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHS
T ss_pred cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhC
Confidence 567999999999987554333488999999999999999999887766554
No 102
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.84 E-value=1.2e-08 Score=112.01 Aligned_cols=58 Identities=19% Similarity=0.295 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHH-cCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++ .|++| ++++|++|..+++++.+|.+.+|+++.||.||+|+|.+..
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 3567788888888 59999 5789999999999999999999999999999999998643
No 103
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.83 E-value=1.3e-08 Score=104.03 Aligned_cols=53 Identities=21% Similarity=0.120 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 389 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
.+.+.+.+++.|++++++++|++|..+++.+. |.+.+|+++.+|.||+|+|..
T Consensus 68 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 68 VKGLVEQVAPFNPVYSLGERAETLEREGDLFK-VTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHGGGCCEEEESCCEEEEEEETTEEE-EEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEECCCEEE-EEECCCCEEEeCEEEECCCCC
Confidence 33444556667889999999999998877544 778888889999999999973
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.81 E-value=3.4e-08 Score=95.81 Aligned_cols=57 Identities=18% Similarity=0.212 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHc-CceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 387 GIAKSLAKGLADK-GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 387 ~l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
.+.+.|.+.+++. |++++ +++|++|..+++++.+|.+.+|++++||.||+|+|.+..
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4556677788887 89998 679999999888888899999988999999999998654
No 105
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.81 E-value=1.5e-08 Score=102.41 Aligned_cols=53 Identities=21% Similarity=0.169 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 389 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+.+.+++.|+++++ ++|++|..+++.+. |.+.+|+++.+|.||+|+|...
T Consensus 73 ~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~-v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 73 IKVFNKHIEKYEVPVLL-DIVEKIENRGDEFV-VKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHTTTCCEEE-SCEEEEEEC--CEE-EEESSSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHcCCEEEE-EEEEEEEecCCEEE-EEECCCCEEEcCEEEECcCCCC
Confidence 34455566777999999 89999998766654 7788888999999999999763
No 106
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.80 E-value=2.8e-08 Score=104.64 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
...+.+.+.+.++++|++++++++|++|..+++++.+|++++|+++.+|.||+++|...
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 45788889999999999999999999999888899899999999999999999999753
No 107
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.80 E-value=6e-09 Score=105.97 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCCh
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATR 441 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~ 441 (579)
.+...+.+.+++.|++++++++|++|..+++....|.+.+|+ +.+|.||+|+|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 68 ELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 334455566677799999999999999877633347788886 999999999997
No 108
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.79 E-value=1.3e-08 Score=112.19 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHH-cCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+...|.+.+++ .|++| ++++|++|..+++++.+|.+.+|.++.||.||+|+|.+..
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 3567788888888 69999 5789999998888999999999988999999999998754
No 109
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.79 E-value=1.6e-08 Score=104.49 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 388 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
+.+.+.+.+++.|++++++++|++|..++++...|.+.+|+++.+|.||+|+|..
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 3344555667778999999999999987652234778888889999999999973
No 110
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.77 E-value=3.7e-08 Score=107.90 Aligned_cols=42 Identities=33% Similarity=0.436 Sum_probs=39.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
..+||+|||||++|+++|..|++.|++|+|+||.+.+||...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999998654
No 111
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.77 E-value=5.7e-08 Score=106.29 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeC-CEEEEEEeCCCcEEEcCEEEECCChhHHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREFYAKTIISNATRWDTF 445 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~-~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~ 445 (579)
..+...|.+.+++.|++++.+ +|++|..++ +.+.+|++.+|++++||.||.|.|.+...
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 578889999999999999999 899998864 45667888899889999999999988654
No 112
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.76 E-value=3.1e-08 Score=99.96 Aligned_cols=38 Identities=24% Similarity=0.340 Sum_probs=34.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCc
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (579)
++|||+|||||++|++||.+|+|+|++|+|+|+.. +||
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 46999999999999999999999999999999964 455
No 113
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.76 E-value=5.8e-08 Score=104.20 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEE-eCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVR-LSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~-~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|..+++++..|+ +.+|+ +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 57788899999999999999999999998766544688 88897 99999999999754
No 114
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.74 E-value=3.7e-08 Score=108.38 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHc-CceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADK-GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+...|.+.+++. |++|+ +..|+.|..+++++.+|.+.+|+++.||.||+|+|.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 5567777888874 99995 56899999999999999999999999999999999874
No 115
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.74 E-value=4.3e-08 Score=107.26 Aligned_cols=42 Identities=33% Similarity=0.436 Sum_probs=38.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999998643
No 116
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.73 E-value=2.5e-08 Score=100.59 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=42.2
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC--CCc--EEEcCEEEECCChhH
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLS--DGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~--dG~--~i~Ad~VV~a~~~~~ 443 (579)
.+.+++.|++++++++|++|..+++++.+|++. +|+ ++.+|.||+++|...
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEE
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCC
Confidence 344567899999999999999888888778776 786 789999999999643
No 117
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.72 E-value=2.8e-08 Score=100.69 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC----C--cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD----G--REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d----G--~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..+++++.+|++.+ | +++.+|.||+++|...
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 45677788888999999999999999998776777787764 5 4799999999999653
No 118
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.71 E-value=6.7e-08 Score=104.55 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=41.5
Q ss_pred HHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 394 KGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 394 ~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.++++|++|+++++|++|..+ +++.+|.+.+|+++.+|.||+++|...
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~-~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN-EKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS-SSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHhCCcEEEeCCeeEEEecC-CceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 6678889999999999999754 445667888998999999999999764
No 119
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.71 E-value=2e-07 Score=103.95 Aligned_cols=57 Identities=12% Similarity=0.172 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHc--CceEEeCceeeEEEEeCC---EEEEEEe---CCCc--EEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADK--GSEILYKANVTKVILEQG---KAVGVRL---SDGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~--G~~I~l~~~V~~I~~~~~---~v~gV~~---~dG~--~i~Ad~VV~a~~~~~ 443 (579)
.+...|.+.+++. |++|+.++.|++|..+++ ++.||.. .+|+ .+.|+.||+|+|.+.
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5677788888887 999999999999999877 8998865 4564 589999999999765
No 120
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.70 E-value=9.5e-08 Score=101.99 Aligned_cols=42 Identities=33% Similarity=0.465 Sum_probs=38.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecCCCCCccee
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYVIPGGSSG 197 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~~~gg~~~ 197 (579)
..+||+|||||++||++|..|++.|. +|+|||+.+.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 45899999999999999999999999 9999999999998653
No 121
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.68 E-value=7.7e-08 Score=105.52 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC---C--cEEEcCEEEECCChhHHHhhccC
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G--~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
.+.+.|.+.+++. |+++++|++|..++++++ |++.+ | ++++||.||.|.|.+..+.+.++
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 4566777777765 999999999998888776 55544 6 46999999999999988777774
No 122
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.67 E-value=6.4e-08 Score=105.12 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEe-CCEEEEEEeCCCcEEEcCEEEECCChhHHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRLSDGREFYAKTIISNATRWDTF 445 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~-~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~ 445 (579)
..+...|.+.+++.|++++.+ +|++|..+ ++.+.+|++.+|++++||.||.|.|.+...
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 467788888899999999999 99999885 455677889999889999999999998654
No 123
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.66 E-value=1.2e-08 Score=104.33 Aligned_cols=66 Identities=26% Similarity=0.285 Sum_probs=48.7
Q ss_pred ccchhhhhccccccccceeecCCCcCCCCCCCCccEEEECCChhHHHHHHHHHH--cCCcEEEEecCCCCCccee
Q 008069 125 RNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAV--KGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~g~~~a~~l~~--~g~~v~~~e~~~~~gg~~~ 197 (579)
|.++.....++.++...+.. +.....+||+||||||+||+||++|++ .|++|+||||.+.+||.+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 40 FAPIRESTVSRAMTSRYFKD-------LDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp CCCCCHHHHHHHHHHHHHHH-------HHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCccHHHHHHHHHHHHHhh-------hhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 45555555555554433221 112346899999999999999999985 5999999999999999765
No 124
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.65 E-value=2.3e-07 Score=85.83 Aligned_cols=54 Identities=17% Similarity=0.074 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+.+.+.+++.|++++++ +|++|..+++.+ .|++++| ++.+|.||+|+|...
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~-~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVF-EVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSE-EEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEE-EEEECCC-EEEECEEEECCCCCC
Confidence 34455667788889999999 999999876654 4778888 899999999999764
No 125
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.65 E-value=1.3e-07 Score=103.07 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHH-cCceEEeCceeeEEEEeC-CEEEEEEeCCCcEEEcCEEEECCChhHHH-hhccC
Q 008069 386 GGIAKSLAKGLAD-KGSEILYKANVTKVILEQ-GKAVGVRLSDGREFYAKTIISNATRWDTF-GKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~-~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~-~~Ll~ 450 (579)
..+...|.+.+++ .|++++.+ +|++|..++ +.+.+|++.+|++++||.||.|.|.+..+ .++++
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhC
Confidence 3677888888988 89999999 599998864 44567888888789999999999998654 34443
No 126
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.64 E-value=1.5e-07 Score=103.34 Aligned_cols=64 Identities=22% Similarity=0.243 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHc-CceEEeCceeeEEEEeC-CEEEEEEeCCCcEEEcCEEEECCChhHHH-hhccC
Q 008069 386 GGIAKSLAKGLADK-GSEILYKANVTKVILEQ-GKAVGVRLSDGREFYAKTIISNATRWDTF-GKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~-~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~-~~Ll~ 450 (579)
..+.+.|.+.+++. |++++++ +|++|..++ +.+.+|++.+|++++||.||.|+|.+... .++++
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg 260 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAME 260 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhC
Confidence 36788899999998 9999999 999998754 55677889999889999999999988654 33443
No 127
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.62 E-value=8.7e-08 Score=99.05 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+...+.+.+++.|++++++++|++|..+++.+. |.+.+| ++.+|.||+|+|.+.
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAYYT-IATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE-EEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEE-EEeCCC-EEEeCEEEECCCCCC
Confidence 4455566677888999999999999998766554 777777 599999999999864
No 128
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.62 E-value=3.3e-07 Score=99.25 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|++|+++++|++|..+++++. |++.+|+++.+|.||+|+|....
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAGVL-VTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEE-EEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEE-EEECCCcEEEcCEEEECCCCCcC
Confidence 46788889999999999999999999998766654 77788889999999999997754
No 129
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.62 E-value=1.9e-07 Score=100.43 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
...+.+.+.+.+++.|++++++++|++|..+++++. |.+.+|+++.+|.||+|+|...
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEE-EEEeCCCEEEcCEEEECCCCCc
Confidence 457888899999999999999999999988777776 7788898999999999999753
No 130
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.59 E-value=5.8e-07 Score=96.37 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc-EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR-EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~-~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..++++ ..|++.+|+ ++.+|.||+|+|...
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 466778889999999999999999999887666 458888998 899999999998654
No 131
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.59 E-value=4.4e-07 Score=91.41 Aligned_cols=51 Identities=20% Similarity=0.182 Sum_probs=40.5
Q ss_pred HHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 391 SLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 391 aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+.+++.|+++++ ++|++|..+++.+. |.+.+|+++.+|.||+|+|...
T Consensus 64 ~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~-v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEM-TAVQRVSKKDSHFV-ILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHTTSCEEEC-SCEEEEEEETTEEE-EEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEEcCCEEE-EEEcCCCEEECCEEEECCCCCC
Confidence 344455667899988 78999998877654 6678888899999999999653
No 132
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.59 E-value=1.1e-07 Score=106.06 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCc--eEEeCceeeEEEEeCC----EEEEEEeC------CC--cEEEcCEEEECCChhHHHhhccCC
Q 008069 386 GGIAKSLAKGLADKGS--EILYKANVTKVILEQG----KAVGVRLS------DG--REFYAKTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~--~I~l~~~V~~I~~~~~----~v~gV~~~------dG--~~i~Ad~VV~a~~~~~~~~~Ll~~ 451 (579)
..+...|.+.+++.|+ +|+++++|++|..+++ .+. |++. +| ++++||.||.|.|.+..+.++++.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 3677788899999987 9999999999998752 343 5543 46 469999999999999888777753
No 133
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.59 E-value=2.4e-07 Score=98.94 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..++++...|++.+|+++.+|.||+|+|...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 4677888899999999999999999998765443357888998899999999998654
No 134
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.58 E-value=3.5e-07 Score=92.92 Aligned_cols=40 Identities=43% Similarity=0.688 Sum_probs=36.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcce
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (579)
..+||+|||||++|+++|..|++.|++|+|+|+. .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 3589999999999999999999999999999998 677754
No 135
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.57 E-value=4.1e-07 Score=90.72 Aligned_cols=34 Identities=32% Similarity=0.516 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999999999999965
No 136
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.57 E-value=5.3e-07 Score=91.27 Aligned_cols=40 Identities=35% Similarity=0.692 Sum_probs=35.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcce
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (579)
..+||+|||||++|+++|..|++.|++|+|+|+ ..+||.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 468999999999999999999999999999999 4566643
No 137
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.56 E-value=7e-07 Score=96.55 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.++++|++|+++++|++|..++++...|++.+|+++.+|.||+|+|....
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 46778889999999999999999999987654434588889989999999999996543
No 138
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.55 E-value=6.2e-08 Score=103.58 Aligned_cols=56 Identities=11% Similarity=0.061 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|..+++++ .|.+++| ++.+|.||+|+|...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 5788889999999999999999999999777777 6888777 899999999999754
No 139
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.49 E-value=2.1e-07 Score=94.77 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 388 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+.+.+.+++.|+++++++ |++|..+++.+. |.+ +|+++++|.||+|+|.+.
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~-v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSSKPFK-LFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSSSSEE-EEC-SSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEE-EEE-CCcEEEcCEEEECCCCCc
Confidence 33445556677899999987 999987766554 666 778899999999999864
No 140
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.49 E-value=5.1e-07 Score=95.89 Aligned_cols=57 Identities=18% Similarity=0.160 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEE--eCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVIL--EQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~--~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
..+.+.+.+.+++.|++++++++|++|.. +++++.+|.+.+|+++.+|.||+++|..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 46778888999999999999999999987 5677778899999999999999999954
No 141
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.49 E-value=9.6e-07 Score=94.69 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=37.7
Q ss_pred ccEEEECCChhHHHHHHHHHH---cCCc---EEEEecCCCCCccee
Q 008069 158 YDAIVIGSGIGGLVAATQLAV---KGAR---VLVLEKYVIPGGSSG 197 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~---~g~~---v~~~e~~~~~gg~~~ 197 (579)
+||+|||||++|+++|..|++ .|.+ |+|||+.+.+||...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 799999999999999999999 9999 999999999998755
No 142
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=1.4e-06 Score=93.45 Aligned_cols=42 Identities=38% Similarity=0.552 Sum_probs=38.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 468999999999999999999999999999999988888653
No 143
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.47 E-value=9.1e-08 Score=100.98 Aligned_cols=57 Identities=23% Similarity=0.158 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.++++|++++++++|++|..++ ++.+|+++||+++.+|.||+++|...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCee
Confidence 3667788889999999999999999998644 56678899999999999999999754
No 144
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.47 E-value=3.2e-07 Score=98.05 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|++|+++++|++|..+++++..|.+ +|+++.+|.||+|+|....
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 577888999999999999999999999876777776765 7888999999999996543
No 145
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.46 E-value=3.6e-07 Score=99.61 Aligned_cols=58 Identities=16% Similarity=0.069 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|+++++++.|+++...++++. |.+.+++++.+|.|++|+|....
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~-v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKIL-VEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEE-EEETTSCEEEESEEEECSCEEES
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEE-EEEcCCCeEEEEEEEEcccccCC
Confidence 57888999999999999999999999999888876 78888888999999999997654
No 146
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.46 E-value=1.3e-06 Score=93.30 Aligned_cols=38 Identities=26% Similarity=0.177 Sum_probs=35.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC-----CcEEEEecCCCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKG-----ARVLVLEKYVIPG 193 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g-----~~v~~~e~~~~~g 193 (579)
..+||+|||||++|+++|..|++.| .+|+|||+.+.+|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 3579999999999999999999999 9999999999877
No 147
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.45 E-value=1.5e-06 Score=95.34 Aligned_cols=61 Identities=26% Similarity=0.245 Sum_probs=46.1
Q ss_pred HHHcCceEEeCceeeEEEEe----CCEEEEEEeC--CCc--EEEcC-EEEECCChhHHHhhccCCCCCCh
Q 008069 396 LADKGSEILYKANVTKVILE----QGKAVGVRLS--DGR--EFYAK-TIISNATRWDTFGKLLKGEQLPK 456 (579)
Q Consensus 396 l~~~G~~I~l~~~V~~I~~~----~~~v~gV~~~--dG~--~i~Ad-~VV~a~~~~~~~~~Ll~~~~lp~ 456 (579)
+.+.+.+|++++.|++|..+ +++++||++. +|+ +++|+ .||+++|...+.+.|+-...-|+
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~ 306 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMK 306 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCH
Confidence 44568999999999999998 7899999874 565 47786 69999999887654443323343
No 148
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.44 E-value=5.9e-07 Score=90.43 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=40.0
Q ss_pred HHHHHHHcCceEEeCceeeEEEEeC--CEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 392 LAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 392 L~~~l~~~G~~I~l~~~V~~I~~~~--~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+.+++.|++++++++|+.|..++ +....|.+.+|+++.+|.||+|+|...
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 4445667799999999999997642 223347788888899999999999753
No 149
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.43 E-value=9.2e-07 Score=90.30 Aligned_cols=40 Identities=40% Similarity=0.373 Sum_probs=35.3
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcc
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGS 195 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~ 195 (579)
...+||+|||||++|+++|..|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 34689999999999999999999999999999975 55654
No 150
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.43 E-value=5.9e-07 Score=99.32 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|..+++ +|.+.+|+++.+|.||+|+|...
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCCCEEEcCEEEEccCCCC
Confidence 57788889999999999999999999976545 36688999999999999999653
No 151
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.41 E-value=8.5e-07 Score=93.32 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
..+.+.+.+.+++.|++++++++|++|.. ++ |++++|+++.+|.||+++|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~---v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE---IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE---EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce---EEECCCCEEeeeEEEECCCCC
Confidence 57788899999999999999999999853 33 678899999999999998853
No 152
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.40 E-value=1.9e-07 Score=94.34 Aligned_cols=41 Identities=32% Similarity=0.593 Sum_probs=36.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
..|||+|||||++|++||..|++.|++|+|+||. .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 4699999999999999999999999999999985 5777654
No 153
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.38 E-value=1.8e-06 Score=93.86 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=41.2
Q ss_pred HHHHHHHHHcCceEEeCceeeEEEEeC--CEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 390 KSLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 390 ~aL~~~l~~~G~~I~l~~~V~~I~~~~--~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+.+.+++.|++++.+++|++|..+. +....|.+.+|+++.+|.||+|+|...
T Consensus 271 ~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 271 GALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 344455677899999999999997542 222347788898999999999999753
No 154
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.34 E-value=3.4e-06 Score=91.34 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcC-ceEEeCceeeEEEEeC--CEEEEEEeC--CC-----cEEEcCEEEECCChhHHHhhcc
Q 008069 389 AKSLAKGLADKG-SEILYKANVTKVILEQ--GKAVGVRLS--DG-----REFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 389 ~~aL~~~l~~~G-~~I~l~~~V~~I~~~~--~~v~gV~~~--dG-----~~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
..++.+.++++| ++|++++.|++|..++ ++++||++. +| .+++|+.||+|+|.+.+...|+
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 344555566675 8999999999999984 379999884 56 3588999999999987654443
No 155
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=3.7e-06 Score=89.81 Aligned_cols=39 Identities=38% Similarity=0.608 Sum_probs=36.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (579)
++||+|||||++|+++|..|++.|++|+|+|+. .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 489999999999999999999999999999998 677764
No 156
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.31 E-value=1.7e-06 Score=96.82 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.5
Q ss_pred CccEEEECCChhHHHHHHHHHH-----cCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAV-----KGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~-----~g~~v~~~e~~~~~ 192 (579)
.+||+|||||++||++|..|++ .|++|+|+||.+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999997654
No 157
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.30 E-value=6.1e-06 Score=89.24 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc----EEEcCEEEECCCh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR----EFYAKTIISNATR 441 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~----~i~Ad~VV~a~~~ 441 (579)
..+.+.+.+.|+++|++|+++++|++|. .++.+..+...||+ ++.+|.||+|+|.
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~-~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVE-EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEC-SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEe-CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 5788888999999999999999999985 22333345566774 5899999999984
No 158
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.28 E-value=3.5e-06 Score=92.52 Aligned_cols=54 Identities=19% Similarity=0.362 Sum_probs=43.1
Q ss_pred HcCceEEeCceeeEEEEe--CCEEEEEEeC--CCc--EEEc-CEEEECCChhHHHhhccCC
Q 008069 398 DKGSEILYKANVTKVILE--QGKAVGVRLS--DGR--EFYA-KTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 398 ~~G~~I~l~~~V~~I~~~--~~~v~gV~~~--dG~--~i~A-d~VV~a~~~~~~~~~Ll~~ 451 (579)
+.|.+|++++.|++|..+ +++++||++. +|+ +++| +.||+++|...+.+.|+-.
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~S 278 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLS 278 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHc
Confidence 458999999999999998 7899999875 365 4677 5799999998876545433
No 159
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.26 E-value=3.7e-06 Score=92.27 Aligned_cols=57 Identities=16% Similarity=0.249 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEe-------------------CCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILE-------------------QGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~-------------------~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..+ ++++. +.+.+|+++.+|.||+|+|...
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEcCCCEEEcCEEEECcCCcc
Confidence 467788888999999999999999999873 55555 6678899999999999999653
No 160
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.25 E-value=7.7e-06 Score=88.64 Aligned_cols=60 Identities=23% Similarity=0.138 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcC-ceEEeCceeeEEEEeC-C-EEEEEEeC--CC-----cEEEcCEEEECCChhHHHhhc
Q 008069 389 AKSLAKGLADKG-SEILYKANVTKVILEQ-G-KAVGVRLS--DG-----REFYAKTIISNATRWDTFGKL 448 (579)
Q Consensus 389 ~~aL~~~l~~~G-~~I~l~~~V~~I~~~~-~-~v~gV~~~--dG-----~~i~Ad~VV~a~~~~~~~~~L 448 (579)
..++.+.++++| ++|++++.|++|..++ + +++||++. +| .+++|+.||+|+|.+.+...|
T Consensus 229 ~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 229 DKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp TTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 344555555665 9999999999999986 4 79999874 56 258899999999998765444
No 161
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.23 E-value=6e-07 Score=90.45 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=33.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..|||+|||||+||++||..|++.|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 459999999999999999999999999999999753
No 162
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.19 E-value=6.1e-06 Score=90.37 Aligned_cols=63 Identities=19% Similarity=0.102 Sum_probs=45.8
Q ss_pred HHHHcCceEEeCceeeEEEEe----C-CEEEEEEeCC--C-c--EEEc-CEEEECCChhHHHhhccCCCCCChH
Q 008069 395 GLADKGSEILYKANVTKVILE----Q-GKAVGVRLSD--G-R--EFYA-KTIISNATRWDTFGKLLKGEQLPKE 457 (579)
Q Consensus 395 ~l~~~G~~I~l~~~V~~I~~~----~-~~v~gV~~~d--G-~--~i~A-d~VV~a~~~~~~~~~Ll~~~~lp~~ 457 (579)
.+.+.+.+|++++.|++|..+ + ++++||++.+ | + +++| +.||+++|...+.+.|+-...-|++
T Consensus 217 ~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~ 290 (566)
T 3fim_B 217 AQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDEN 290 (566)
T ss_dssp HTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHH
T ss_pred hccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChH
Confidence 334568999999999999987 4 5788998753 4 3 4778 6899999999886545433233443
No 163
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.18 E-value=1.6e-06 Score=94.27 Aligned_cols=53 Identities=21% Similarity=0.301 Sum_probs=43.3
Q ss_pred cCceEEeCceeeEEEEeCCEEEEEEeCCCc---EEEcCEEEECCChhHHHhhccCC
Q 008069 399 KGSEILYKANVTKVILEQGKAVGVRLSDGR---EFYAKTIISNATRWDTFGKLLKG 451 (579)
Q Consensus 399 ~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~---~i~Ad~VV~a~~~~~~~~~Ll~~ 451 (579)
.+.+|++++.|++|..+++++++|...+.. ++.|+.||+++|...+...|+-.
T Consensus 224 ~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~S 279 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRS 279 (526)
T ss_dssp TTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhc
Confidence 468999999999999999999998874332 47899999999999886555543
No 164
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.17 E-value=3.2e-06 Score=88.33 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=37.7
Q ss_pred HHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 396 l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
+++.|++++++++|++|..+++. |++++|+++.+|.+|+|+|..
T Consensus 72 ~~~~~i~~~~~~~V~~id~~~~~---v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPNNKL---VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHTTCEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEecCCC
Confidence 35679999999999999877664 568899999999999999974
No 165
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.14 E-value=2e-06 Score=88.79 Aligned_cols=40 Identities=33% Similarity=0.395 Sum_probs=35.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCc
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (579)
..++||+|||||++|+++|+.|+++|++|+|+||....+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 4568999999999999999999999999999999875544
No 166
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.8e-06 Score=93.27 Aligned_cols=58 Identities=24% Similarity=0.302 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC---C--cEEEcCEEEECCChhH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWD 443 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G--~~i~Ad~VV~a~~~~~ 443 (579)
...+.+.+.+.+++.|++|+++++|++|..+++.+. |.+.+ | +++.+|.||+|+|...
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAK-VTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEE-EEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEE-EEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 357788889999999999999999999998877654 55542 5 5799999999999653
No 167
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.06 E-value=1.9e-05 Score=83.81 Aligned_cols=53 Identities=8% Similarity=0.147 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.++++|++++++++|+++. ++. |.+++|+++.+|.||+++|...
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~~~---v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN--GNE---ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE--TTE---EEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec--CCe---eeecCCeEEeeeeEEEEeceec
Confidence 4566778889999999999999999874 443 6689999999999999999654
No 168
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.04 E-value=1.6e-05 Score=86.86 Aligned_cols=48 Identities=17% Similarity=0.348 Sum_probs=40.6
Q ss_pred HcCceEEeCceeeEEEEeC-CEEEEEEeCC---Cc--EEEcC-EEEECCChhHHH
Q 008069 398 DKGSEILYKANVTKVILEQ-GKAVGVRLSD---GR--EFYAK-TIISNATRWDTF 445 (579)
Q Consensus 398 ~~G~~I~l~~~V~~I~~~~-~~v~gV~~~d---G~--~i~Ad-~VV~a~~~~~~~ 445 (579)
+.|++|++++.|++|..++ ++++||++.+ |+ +++|+ .||+|+|.+.+.
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp 275 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTP 275 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCc
Confidence 5689999999999999987 8899998744 54 58898 999999997653
No 169
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.04 E-value=1.9e-06 Score=92.36 Aligned_cols=41 Identities=34% Similarity=0.418 Sum_probs=38.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
++||+|||||++|+++|..|++.|++|+|+||.+.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 58999999999999999999999999999999999999765
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.03 E-value=4.9e-05 Score=79.10 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=42.5
Q ss_pred HHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 392 L~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
+.+.+++.|++++++++|++|..+++.+ .|++.+|+++.+|.||+|+|...
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGEGL-EAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETTEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCCEE-EEEECCCCEEECCEEEECcCCCc
Confidence 3345677899999999999999877665 47888998999999999999654
No 171
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.03 E-value=5e-07 Score=100.10 Aligned_cols=109 Identities=17% Similarity=0.043 Sum_probs=66.5
Q ss_pred cccccccccccccccccccccccc----cc--CC-ccccccccccCCCCCCCCCCCCCCCcccccccccc-ccchhhhhc
Q 008069 62 RNCMIQSFEHVNTLPFSDYKFSRM----KL--FK-PRYEKSSLFSGDSLKSSNFNGSTLRSEDLGCGESE-RNRDFALMA 133 (579)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 133 (579)
=||...||....+..+++..-... +. .+ +.+.+........++.|.. .|.+.|..+... .....++.+
T Consensus 22 vy~~~~Cp~C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v----~i~g~~igG~~~l~~~~~~g~L 97 (598)
T 2x8g_A 22 LFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQM----FVRGKFIGDSQTVLKYYSNDEL 97 (598)
T ss_dssp EEECTTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE----EETTEEEECHHHHHHHHHTTCH
T ss_pred EEECCCChhHHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE----EECCEEEEeeehhhhhhhcCcc
Confidence 366667777777776665433110 00 01 2222322222334454433 466666544332 244556666
Q ss_pred cccccccceeecCCCcCCCCCCCCccEEEECCChhHHHHHHHHHHcCCcEEEEec
Q 008069 134 KTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEK 188 (579)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~ 188 (579)
++.+.+. ...+||+|||||++|+++|..|++.|++|+|+|+
T Consensus 98 ~~~l~~~--------------~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 98 AGIVNES--------------KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp HHHHHCC--------------SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhhcccc--------------cccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 6555331 2469999999999999999999999999999998
No 172
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.99 E-value=5.2e-06 Score=90.35 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCC-EE--EEEEeCCCc-EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQG-KA--VGVRLSDGR-EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~-~v--~gV~~~dG~-~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|..+++ ++ ..|++.+|+ ++.+|.||+|+|...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 56788899999999999999999999987544 33 347788887 899999999999653
No 173
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.97 E-value=5.6e-06 Score=88.92 Aligned_cols=59 Identities=24% Similarity=0.258 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCC---cEEEcCEEEECCChhHH
Q 008069 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG---REFYAKTIISNATRWDT 444 (579)
Q Consensus 385 ~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG---~~i~Ad~VV~a~~~~~~ 444 (579)
...+.+.+.+.+++.|++++++++|++|..+++++. |.+.++ +++.+|.||+++|....
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVT-VKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEE-EEEESSSEEEEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEE-EEEEeCCCcEEEECCEEEEeeCCccc
Confidence 357888899999999999999999999998776655 666554 57999999999996543
No 174
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.96 E-value=6.7e-05 Score=79.95 Aligned_cols=50 Identities=24% Similarity=0.250 Sum_probs=41.5
Q ss_pred HHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 394 KGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 394 ~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
+.+++.|++++++++|++|..+++++. |++++|+++.+|.||+|+|....
T Consensus 216 ~~l~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 216 RVFKKQGLTIRTGVRVTAVVPEAKGAR-VELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHTCEEECSCCEEEEEEETTEEE-EEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHCCCEEEECCEEEEEEEeCCEEE-EEECCCeEEEcCEEEECcCCCcC
Confidence 345667999999999999998777654 77778889999999999997643
No 175
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.95 E-value=4.6e-06 Score=89.40 Aligned_cols=57 Identities=9% Similarity=0.194 Sum_probs=45.2
Q ss_pred HHHHHHHHHHH-HHcCceEEeCceeeEEEEeCCEEEEEEeC--CC--cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGL-ADKGSEILYKANVTKVILEQGKAVGVRLS--DG--REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l-~~~G~~I~l~~~V~~I~~~~~~v~gV~~~--dG--~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+ ++.|++|+++++|++|..+++++. |.+. +| +++.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVS-LEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEE-EEEECC---EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEE-EEEEcCCCceEEEECCEEEECCCccc
Confidence 46778888999 999999999999999987665543 5554 66 5799999999999654
No 176
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.93 E-value=6.4e-06 Score=89.52 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeC----CEEE-EEEeCCCc---EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ----GKAV-GVRLSDGR---EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~----~~v~-gV~~~dG~---~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|...+ +.+. .+...+|+ ++.+|.||+++|...
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 5778888899999999999999999987532 3332 12334553 468999999999654
No 177
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.91 E-value=4.6e-06 Score=85.61 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhccC
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll~ 450 (579)
..+..+|.+.++++|++|+. ++|++|...+ .++||.||+|+|.|.. .|++
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~------------~~~a~~VV~A~G~~s~--~l~~ 191 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA------------REGADVIVNCTGVWAG--ALQR 191 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH------------HTTCSEEEECCGGGGG--GTSC
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh------------cCCCCEEEECCCcChH--hhcC
Confidence 68899999999999999998 8998875321 2679999999999873 5554
No 178
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.89 E-value=4.3e-06 Score=90.28 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC--CC--cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS--DG--REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~--dG--~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++. ++|+++++|++|..+++++. |.+. +| +++.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 57788888888887 99999999999998777665 5554 67 5799999999999654
No 179
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.88 E-value=5.5e-06 Score=89.14 Aligned_cols=58 Identities=12% Similarity=0.049 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC----CcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD----GREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d----G~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|++|+++++|++|..+++.+ .|++.+ |+++.+|.||+++|....
T Consensus 226 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGV-YVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEE-EEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeE-EEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 5677888899999999999999999998776654 466766 778999999999996543
No 180
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.88 E-value=8e-06 Score=87.47 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|++|+++++|++|..+++.+ .|.++ +.++.+|.||+|+|.+..
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEF-VLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEE-EEEET-TEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEE-EEEEC-CcEEEcCEEEECCCCCcC
Confidence 4678889999999999999999999998776654 46666 457999999999997653
No 181
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.88 E-value=7.2e-06 Score=87.53 Aligned_cols=40 Identities=48% Similarity=0.630 Sum_probs=37.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 7999999999999999999999999999999988998754
No 182
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.88 E-value=6.3e-06 Score=88.47 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCE-EEEEEe-----CCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRL-----SDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~-v~gV~~-----~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..++++ +. |++ .+|+++.+|.||+++|...
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~-v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKID-VSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEE-EEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEE-EEEEecCCCCceEEEcCEEEECcCCCc
Confidence 567788899999999999999999999877655 43 553 4667899999999999653
No 183
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.87 E-value=4.7e-06 Score=89.55 Aligned_cols=58 Identities=17% Similarity=0.232 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEE--eCCEEEEEEeC-----CCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVIL--EQGKAVGVRLS-----DGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~--~~~~v~gV~~~-----dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|++|+++++|++|.. +++. ..|++. +|+++.+|.||+|+|....
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNV-VEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCe-EEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 56788889999999999999999999987 4443 346665 3567999999999997643
No 184
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.87 E-value=7.5e-06 Score=88.24 Aligned_cols=58 Identities=12% Similarity=0.141 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC---Cc--EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---GR--EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G~--~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|...+++...|++.+ |+ ++.+|.||+++|...
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 56788889999999999999999999987443322355543 55 478999999999654
No 185
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.86 E-value=6e-06 Score=88.76 Aligned_cols=58 Identities=16% Similarity=0.054 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCE-EEEEEeCC---C----cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSD---G----REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~-v~gV~~~d---G----~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..++++ ...|.+.+ | +++.+|.||+++|...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 567888889999999999999999999876544 33466665 2 5789999999999653
No 186
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.86 E-value=7.2e-06 Score=86.89 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+||+|||||++||++|+.|+++|++|+|+||.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45899999999999999999999999999999976
No 187
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.83 E-value=8.5e-06 Score=87.63 Aligned_cols=58 Identities=12% Similarity=0.133 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCE-EEEEEeCCC-cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDG-REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~-v~gV~~~dG-~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|..++++ +..|++.+| +++.+|.||+|+|...
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 467788889999999999999999999875443 345888899 7899999999999654
No 188
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.81 E-value=0.00016 Score=77.20 Aligned_cols=50 Identities=18% Similarity=0.236 Sum_probs=40.3
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC-C--Cc--EEEcCEEEECCChhH
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLS-D--GR--EFYAKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~-d--G~--~i~Ad~VV~a~~~~~ 443 (579)
.+.+++.|++++++++|++|..+++++. |++. + |+ ++.+|.||+|+|...
T Consensus 217 ~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 217 RRALEKEGIRVRTKTKAVGYEKKKDGLH-VRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTEEE-EEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred HHHHHhcCCEEEcCCEEEEEEEeCCEEE-EEEeecCCCceeEEEcCEEEECCCccc
Confidence 3456778999999999999998777654 6665 6 76 799999999998653
No 189
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.81 E-value=1.2e-05 Score=86.58 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.+++.|++|+++++|++|..++++...|++.+|+++.+|.||+|+|....
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 46788899999999999999999999987664434588889988999999999997643
No 190
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.79 E-value=0.00011 Score=78.18 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=38.6
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+++.|++++++++|++|..+ +++..|.+ +|+++.+|.||+|+|...
T Consensus 198 ~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 198 TEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred HHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 34567789999999999999865 55545666 566899999999999654
No 191
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.78 E-value=0.0002 Score=75.18 Aligned_cols=45 Identities=24% Similarity=0.362 Sum_probs=37.9
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
.+.+++.|++++++++|++|. ++ .|++.+|+++.+|.||+++|..
T Consensus 194 ~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 194 ARYHAAQGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHTTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHcCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCC
Confidence 345677899999999999998 44 4778899999999999999965
No 192
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.78 E-value=1.6e-05 Score=82.65 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhHHHhhcc
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
..+.+.|.+.+++.|++|+++++|++|... ++++||.||.|.|.+.. .+.+
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~~S~-R~~l 148 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGVNHK-TAHF 148 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGGGGG-TCCS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCCCch-HHhh
Confidence 467788888888889999999999888521 13679999999999887 6655
No 193
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.77 E-value=1.5e-05 Score=85.67 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCc-----EEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR-----EFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~-----~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++|+++++|++|..++++...|++.+++ ++.+|.||+++|...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 5678888999999999999999999998765432336665553 689999999998643
No 194
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=1.3e-05 Score=85.72 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCC--cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG--~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|.. +++. |...+| +++.+|.||+|+|...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~v~-v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN--GCLL-ANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET--TEEE-EECSSSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe--CCEE-EEECCCceEEEECCEEEECcCCCc
Confidence 46778888899999999999999999975 4433 544456 5799999999999654
No 195
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.73 E-value=1.4e-05 Score=85.64 Aligned_cols=39 Identities=46% Similarity=0.637 Sum_probs=36.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (579)
++||+|||||++|+++|..|++.|++|+|+|+.+ .||.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 5899999999999999999999999999999987 78865
No 196
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.73 E-value=1.7e-05 Score=85.67 Aligned_cols=59 Identities=20% Similarity=0.228 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcE-EEcCEEEECCChhHH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGRE-FYAKTIISNATRWDT 444 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~-i~Ad~VV~a~~~~~~ 444 (579)
..+.+.+.+.++++|++++++++|++|..++++...|++++|++ +.+|.||+++|....
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 57788899999999999999999999987643323477889988 999999999996543
No 197
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.73 E-value=0.00021 Score=76.97 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc---CCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK---GARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~---g~~v~~~e~~~~~ 192 (579)
..+++|||+|..|+-+|..|++. |.+|+++|+.+.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 46899999999999999999999 9999999997754
No 198
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00021 Score=76.74 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+++|||||..|+-.|..|++.|.+|+++|+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 468999999999999999999999999999997754
No 199
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.71 E-value=2.2e-05 Score=87.18 Aligned_cols=41 Identities=29% Similarity=0.408 Sum_probs=37.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcce
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (579)
..+||+|||||++|+++|..|++.|++|+|+||.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999888743
No 200
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.70 E-value=5.7e-05 Score=81.60 Aligned_cols=41 Identities=20% Similarity=0.084 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcce
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (579)
.-+||+|||+|++||++|+.|.+.|...+++|+.+..|+.-
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 45899999999999999999999988888888877776643
No 201
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=0.00026 Score=75.35 Aligned_cols=50 Identities=18% Similarity=0.208 Sum_probs=39.1
Q ss_pred HHHHHcCceEEeCceeeEEEEeCCEEEEEEeC---CCcEEEcCEEEECCChhHH
Q 008069 394 KGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGREFYAKTIISNATRWDT 444 (579)
Q Consensus 394 ~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~---dG~~i~Ad~VV~a~~~~~~ 444 (579)
+.+++.|++++++++|++|..+++++. |.+. +++++.+|.||+++|....
T Consensus 219 ~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 219 KRLKKKGVEVVTNALAKGAEEREDGVT-VTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHHHTTCEEEESEEEEEEEEETTEEE-EEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCCeEE-EEEEeCCceeEEEcCEEEECcCCCcc
Confidence 446778999999999999988776654 5543 4567999999999997643
No 202
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.67 E-value=2.1e-05 Score=84.13 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC-CC--cEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-DG--REFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~-dG--~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.++++|++++++++|++|..+++++. |.+. +| +++.+|.||+++|...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVT-VTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEE-EEEESSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEE-EEEEcCCceEEEEcCEEEECCCCCc
Confidence 46778888999999999999999999987665544 5554 66 5799999999999653
No 203
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=0.00026 Score=76.38 Aligned_cols=36 Identities=11% Similarity=0.065 Sum_probs=33.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 468999999999999999999999999999997754
No 204
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.64 E-value=0.00025 Score=76.25 Aligned_cols=49 Identities=20% Similarity=0.291 Sum_probs=39.1
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+++.|++|+++++|++|.. ++++..|.+ +|+++.+|.||+|+|...
T Consensus 243 ~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 243 AKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 3456788999999999999985 455555666 677899999999999654
No 205
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.64 E-value=0.00027 Score=75.74 Aligned_cols=37 Identities=30% Similarity=0.338 Sum_probs=33.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG 193 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~g 193 (579)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 4789999999999999999999999999999987553
No 206
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.60 E-value=0.00029 Score=75.55 Aligned_cols=36 Identities=31% Similarity=0.314 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+++|||||..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGL 220 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 468999999999999999999999999999997653
No 207
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.59 E-value=0.00037 Score=75.59 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
.+++|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 78999999999999999999999999999997754
No 208
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.55 E-value=6.1e-05 Score=77.53 Aligned_cols=37 Identities=27% Similarity=0.207 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCc
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (579)
+||+|||||++|+.+|+.|+++|++|+|+|+++..+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCC
Confidence 6999999999999999999999999999999875544
No 209
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.53 E-value=0.00066 Score=73.04 Aligned_cols=50 Identities=22% Similarity=0.304 Sum_probs=42.5
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.++++|++++++++|++|..+++++ .|++.+|+++.+|.||+++|...
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSGKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETTEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCCeE-EEEECCCCEEECCEEEECCCCCc
Confidence 345678899999999999998777765 58889999999999999999653
No 210
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.52 E-value=4.8e-05 Score=81.14 Aligned_cols=41 Identities=29% Similarity=0.332 Sum_probs=38.0
Q ss_pred CccEEEECCChhHHHHHHHHHH-c------CCcEEEEecCCCCCccee
Q 008069 157 DYDAIVIGSGIGGLVAATQLAV-K------GARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~-~------g~~v~~~e~~~~~gg~~~ 197 (579)
.+||+|||||++|+++|..|++ . |++|+|||+.+.+||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 4899999999999999999999 7 999999999999998764
No 211
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.52 E-value=5.4e-05 Score=88.28 Aligned_cols=41 Identities=37% Similarity=0.598 Sum_probs=39.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999776
No 212
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.52 E-value=0.00052 Score=73.43 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=33.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 368999999999999999999999999999997754
No 213
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.51 E-value=0.00063 Score=72.51 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999997654
No 214
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.46 E-value=0.00078 Score=71.87 Aligned_cols=36 Identities=33% Similarity=0.301 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 468999999999999999999999999999997654
No 215
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.46 E-value=0.00071 Score=72.52 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=38.9
Q ss_pred HHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
.+.+++.|++++++++|++|..+ +++..|.+. +.++.+|.||+|+|...
T Consensus 234 ~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~-~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 234 YKEADKHHIEILTNENVKAFKGN-ERVEAVETD-KGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHTTCEEECSCCEEEEEES-SBEEEEEET-TEEEECSEEEECSCEEE
T ss_pred HHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEEC-CCEEEcCEEEECcCCCc
Confidence 34567789999999999999864 556667665 45799999999999764
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.46 E-value=0.00056 Score=72.85 Aligned_cols=36 Identities=28% Similarity=0.271 Sum_probs=33.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 468999999999999999999999999999998754
No 217
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.46 E-value=7.9e-05 Score=79.57 Aligned_cols=42 Identities=31% Similarity=0.390 Sum_probs=37.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC--CcEEEEecCCCCCccee
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g--~~v~~~e~~~~~gg~~~ 197 (579)
..+||+|||||++|+.+|..|++.| ++|+|||+.+.+||...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3589999999999999999999998 99999999999988653
No 218
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.42 E-value=0.00099 Score=71.07 Aligned_cols=36 Identities=31% Similarity=0.324 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 468999999999999999999999999999997643
No 219
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.41 E-value=0.0001 Score=78.36 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
..+.+.+.+.+++. +++++++.|++|..++ ++..| ..+|+++.+|.||+++|..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEE-EETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEE-EeCCCEEECCEEEEeeCCc
Confidence 46778888889888 9999999999997544 44444 4467789999999999965
No 220
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.38 E-value=8.5e-05 Score=78.54 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHHH--cCCcEEEEecCCCCCc
Q 008069 158 YDAIVIGSGIGGLVAATQLAV--KGARVLVLEKYVIPGG 194 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~--~g~~v~~~e~~~~~gg 194 (579)
+||+|||||++|+++|..|++ .|++|+|+|+.+..++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~ 41 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF 41 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc
Confidence 699999999999999999999 7899999999887654
No 221
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.37 E-value=0.0014 Score=69.94 Aligned_cols=36 Identities=36% Similarity=0.271 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-.|..|++.|.+|+++++.+.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 468999999999999999999999999999997643
No 222
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.36 E-value=0.0014 Score=70.38 Aligned_cols=36 Identities=33% Similarity=0.357 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 468999999999999999999999999999987754
No 223
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.36 E-value=0.00064 Score=72.54 Aligned_cols=35 Identities=29% Similarity=0.288 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999998764
No 224
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.35 E-value=0.00015 Score=76.02 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=34.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCc--EEEEecCCCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGAR--VLVLEKYVIPG 193 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~--v~~~e~~~~~g 193 (579)
..+||+|||||++|+++|..|++.|++ |+|+|+.+..+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 468999999999999999999999984 99999987654
No 225
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.34 E-value=0.00014 Score=79.52 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=47.4
Q ss_pred HHHHHHHHHH-cCceEEeCceeeEEEEeCCEEEEEEeCC---Cc--EE---EcCEEEECCChhHHHhhcc
Q 008069 389 AKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLSD---GR--EF---YAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 389 ~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G~--~i---~Ad~VV~a~~~~~~~~~Ll 449 (579)
..++.+.+.+ .|++|++++.|++|..++++++||++.+ |+ ++ .+|.||+|+|.+.+...|+
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~ 267 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILF 267 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHH
Confidence 3445555555 4899999999999999988999999865 64 33 7899999999987644343
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.30 E-value=0.00055 Score=70.69 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 6899999999999999999999999999998663
No 227
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.29 E-value=0.00016 Score=76.71 Aligned_cols=36 Identities=31% Similarity=0.298 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCcEEEEecCCCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPG 193 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~g 193 (579)
+||+|||||++|+++|..|++. |++|+|+|+.+..|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 99999999988765
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.28 E-value=0.0017 Score=69.86 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=33.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 478999999999999999999999999999997754
No 229
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.27 E-value=0.00018 Score=77.48 Aligned_cols=37 Identities=11% Similarity=0.224 Sum_probs=34.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcC---CcEEEEecCCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG---ARVLVLEKYVIPG 193 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g---~~v~~~e~~~~~g 193 (579)
++||+|||||++|+++|..|++.| .+|+|+|+.+..|
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 589999999999999999999988 9999999988665
No 230
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.26 E-value=0.0002 Score=77.20 Aligned_cols=39 Identities=26% Similarity=0.410 Sum_probs=34.6
Q ss_pred CCCccEEEECCChhHHHHHHHHHHc--CCcEEEEecCCCCC
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPG 193 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~g 193 (579)
+..+||+|||||++|+++|..|++. |.+|+|+|+.+..+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 3468999999999999999999887 88999999987654
No 231
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.25 E-value=0.0015 Score=70.07 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
..+++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 358999999999999999999999999999984
No 232
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.24 E-value=0.00019 Score=74.63 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcC--CcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g--~~v~~~e~~~ 190 (579)
.+||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999999 4699999875
No 233
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.21 E-value=0.00023 Score=76.43 Aligned_cols=38 Identities=32% Similarity=0.394 Sum_probs=33.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc--CCcEEEEecCCCCCc
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPGG 194 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~gg 194 (579)
.+||+|||||++|+++|..|++. |.+|+|+|+.+..++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 75 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY 75 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC
Confidence 36999999999999999999996 899999999887653
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.19 E-value=0.00024 Score=75.23 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHHH---cCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAV---KGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~---~g~~v~~~e~~~~ 191 (579)
.+||+|||||++|+++|..|++ .|++|+|+|+.+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 3799999999999999999999 8999999999874
No 235
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.17 E-value=0.00013 Score=79.57 Aligned_cols=58 Identities=24% Similarity=0.223 Sum_probs=43.7
Q ss_pred HHHHHHHcCceEEeCceeeEEEEeCC---EEEEEEeC--CCcE--E---EcCEEEECCChhHHHhhcc
Q 008069 392 LAKGLADKGSEILYKANVTKVILEQG---KAVGVRLS--DGRE--F---YAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 392 L~~~l~~~G~~I~l~~~V~~I~~~~~---~v~gV~~~--dG~~--i---~Ad~VV~a~~~~~~~~~Ll 449 (579)
+.+.+++.|++|++++.|++|..+++ +++||++. +|++ + .++.||+|+|.+.+...|+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~ 267 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLL 267 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHH
Confidence 33344567999999999999999763 89999874 5653 4 4689999999987644333
No 236
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.17 E-value=0.0013 Score=71.55 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
...+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 357899999999999999999999999999999875
No 237
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.15 E-value=0.0019 Score=66.01 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=39.3
Q ss_pred HHHcCceEEeCceeeEEEEeCCEEEEEEeC--CC--cEEEcCEEEECCChh
Q 008069 396 LADKGSEILYKANVTKVILEQGKAVGVRLS--DG--REFYAKTIISNATRW 442 (579)
Q Consensus 396 l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~--dG--~~i~Ad~VV~a~~~~ 442 (579)
+++.|++++++++|++|..+++++.+|.+. +| +++.+|.||+++|..
T Consensus 212 ~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 212 RANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred hhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 456789999999999999888887777774 77 579999999999954
No 238
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.15 E-value=0.0029 Score=67.66 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 468999999999999999999999999999997653
No 239
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.12 E-value=0.00025 Score=73.27 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChhH
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~~ 443 (579)
..+.+.+.+.+++.|++++++++|++|. .+ +|++++|+ +.+|.||+++|...
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~p 234 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIVP 234 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCCc
Confidence 4677788899999999999999999996 23 36788887 99999999999653
No 240
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.11 E-value=0.0029 Score=68.78 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=33.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
...+|+|||+|..|+-+|..|++.|.+|+|++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 357899999999999999999999999999999775
No 241
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.08 E-value=0.003 Score=63.71 Aligned_cols=48 Identities=8% Similarity=-0.034 Sum_probs=37.9
Q ss_pred HHHHcCceEEeCceeeEEEEeCCEEEEEEeC---CC--cEEEcCEEEECCChhH
Q 008069 395 GLADKGSEILYKANVTKVILEQGKAVGVRLS---DG--REFYAKTIISNATRWD 443 (579)
Q Consensus 395 ~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~---dG--~~i~Ad~VV~a~~~~~ 443 (579)
.+++.|++++++++|++|.. ++++.+|++. +| +++.+|.||+++|...
T Consensus 200 ~l~~~gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 200 AHEEGRLEVLTPYELRRVEG-DERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp HHHTTSSEEETTEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ccccCCeEEecCCcceeEcc-CCCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 35667999999999999987 4555567665 77 5799999999999653
No 242
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.07 E-value=0.0033 Score=67.42 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 3579999999999999999999999999999853
No 243
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.02 E-value=0.0073 Score=64.03 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHHHc--CCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~~ 191 (579)
..+|+|||+|..|+-+|..|++. |.+|++++|.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 57899999999999999999998 889999999764
No 244
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.99 E-value=0.00048 Score=71.80 Aligned_cols=51 Identities=18% Similarity=0.061 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCCh
Q 008069 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATR 441 (579)
Q Consensus 390 ~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~ 441 (579)
+.+.+.+++.|++++++++|+.+..+++... |++.+|+++.+|.||++.|.
T Consensus 206 ~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~-v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 206 RLYGFGTENALIEWHPGPDAAVVKTDTEAMT-VETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp HHSCTTSTTCSEEEECTTTTCEEEEETTTTE-EEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHhcCcEEEeCceEEEEEecccceE-EEcCCCcEEEeeEEEEecCc
Confidence 3334456788999999999999988765543 78899999999999998874
No 245
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.97 E-value=0.007 Score=60.20 Aligned_cols=45 Identities=9% Similarity=-0.026 Sum_probs=37.2
Q ss_pred cCceEEeCceeeEEEEeCCEEEEEEeC---CCc--EEEcCEEEECCChhH
Q 008069 399 KGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 399 ~G~~I~l~~~V~~I~~~~~~v~gV~~~---dG~--~i~Ad~VV~a~~~~~ 443 (579)
.|++++++++|++|..+++++.+|++. +|+ ++.+|.||+++|...
T Consensus 192 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp TTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 589999999999998876777667775 676 689999999998643
No 246
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.96 E-value=0.0044 Score=63.33 Aligned_cols=50 Identities=10% Similarity=0.095 Sum_probs=38.6
Q ss_pred HHHHHHcC-ceEEeCceeeEEEEeCCEEEEEEeCCCcEEE-cCEEEECCChhH
Q 008069 393 AKGLADKG-SEILYKANVTKVILEQGKAVGVRLSDGREFY-AKTIISNATRWD 443 (579)
Q Consensus 393 ~~~l~~~G-~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~-Ad~VV~a~~~~~ 443 (579)
.+.+++.| ++++++++|++|..+++.+ .|++.+|+++. +|.||+++|...
T Consensus 221 ~~~l~~~g~v~~~~~~~v~~i~~~~~~~-~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 221 GNVIKQGARIEMNVHYTVKDIDFNNGQY-HISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp HHHHHTTCCEEEECSCCEEEEEEETTEE-EEEESSSCCEEESSCCEECCCBCG
T ss_pred HHHHhhCCcEEEecCcEEEEEEecCCce-EEEecCCeEeccCCceEEeeccCC
Confidence 34456676 9999999999998766654 47788998765 599999998643
No 247
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.90 E-value=0.0019 Score=70.47 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
...+|+|||+|..|+-+|..|++.|.+|+|++|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 357899999999999999999999999999999774
No 248
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.86 E-value=0.00067 Score=71.60 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCC--cEEEcCEEEECCChh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATRW 442 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG--~~i~Ad~VV~a~~~~ 442 (579)
....+.+.+.++++|+++++++.|++|+ ++++. +...+| +++.+|.||+++|..
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE--PDKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC--SSEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEe--CCceE-EEeeCCCceEeecceEEEeccCC
Confidence 4556667788899999999999999984 45543 444444 479999999988843
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.80 E-value=0.0046 Score=65.50 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+++|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 468999999999999999999999999999997744
No 250
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.80 E-value=0.0065 Score=60.41 Aligned_cols=44 Identities=25% Similarity=0.315 Sum_probs=35.8
Q ss_pred cCceEEeCceeeEEEEeCCEEEEEEeCC---Cc--EEEcCEEEECCChh
Q 008069 399 KGSEILYKANVTKVILEQGKAVGVRLSD---GR--EFYAKTIISNATRW 442 (579)
Q Consensus 399 ~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G~--~i~Ad~VV~a~~~~ 442 (579)
.|++++++++|++|..+++++.+|++.+ |+ ++.+|.||+++|..
T Consensus 193 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp TTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 4889999999999987767776777753 54 68999999999854
No 251
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.70 E-value=0.013 Score=64.34 Aligned_cols=32 Identities=31% Similarity=0.319 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
.+|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999975
No 252
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.69 E-value=0.0022 Score=71.96 Aligned_cols=35 Identities=26% Similarity=0.137 Sum_probs=31.5
Q ss_pred CccEEEEC--CChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIG--SGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG--~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|+||| +|..|+-+|..|++.|.+|+++++.+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 45799999 999999999999999999999998653
No 253
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.61 E-value=0.0014 Score=72.01 Aligned_cols=54 Identities=26% Similarity=0.246 Sum_probs=42.2
Q ss_pred HHHcCceEEeCceeeEEEEeC----CEEEEEEeC--CCc--EEEc-CEEEECCChhHHHhhcc
Q 008069 396 LADKGSEILYKANVTKVILEQ----GKAVGVRLS--DGR--EFYA-KTIISNATRWDTFGKLL 449 (579)
Q Consensus 396 l~~~G~~I~l~~~V~~I~~~~----~~v~gV~~~--dG~--~i~A-d~VV~a~~~~~~~~~Ll 449 (579)
..+.|++|++++.|++|..++ ++++||++. +|+ +++| +.||+|+|...+...|+
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~ 303 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILE 303 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHH
Confidence 345689999999999999874 489999874 565 4778 89999999986644444
No 254
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.51 E-value=0.017 Score=61.42 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998663
No 255
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.48 E-value=0.027 Score=60.77 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
.+++|||+|..|+-.|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 56999999999999999999999999999984
No 256
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.24 E-value=0.015 Score=62.83 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=36.0
Q ss_pred cCceEEeCceeeEEEEeCCEEEEEEeCC---Cc--EEEcCEEEECCChh
Q 008069 399 KGSEILYKANVTKVILEQGKAVGVRLSD---GR--EFYAKTIISNATRW 442 (579)
Q Consensus 399 ~G~~I~l~~~V~~I~~~~~~v~gV~~~d---G~--~i~Ad~VV~a~~~~ 442 (579)
.|+++++++.|++|..+++++.+|++.+ |+ ++.+|.||+++|..
T Consensus 404 ~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp TTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 4889999999999987777777777753 54 58999999999854
No 257
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.71 E-value=0.011 Score=52.77 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999999999999999865
No 258
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.67 E-value=0.025 Score=65.83 Aligned_cols=47 Identities=13% Similarity=0.239 Sum_probs=37.4
Q ss_pred HHHcCceEEeCceeeEEEEe-CCEEEEEEeCC-------C--cEEEcCEEEECCChh
Q 008069 396 LADKGSEILYKANVTKVILE-QGKAVGVRLSD-------G--REFYAKTIISNATRW 442 (579)
Q Consensus 396 l~~~G~~I~l~~~V~~I~~~-~~~v~gV~~~d-------G--~~i~Ad~VV~a~~~~ 442 (579)
+++.|++|++++.|++|..+ ++++.+|++.+ | +++.+|.||+++|..
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~ 382 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFN 382 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE
T ss_pred HHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC
Confidence 35668999999999999874 56676777754 5 579999999999954
No 259
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.65 E-value=0.015 Score=50.79 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999965
No 260
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.51 E-value=0.13 Score=48.82 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=66.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC-------CcceeEEeeCCeeec--cccccccCCCCCCChH-HH
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP-------GGSSGYYERDGYTFD--VGSSVMFGFSDKGNLN-LI 225 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~-------gg~~~t~~~~g~~~~--~G~~~~~g~~~~~~~~-~~ 225 (579)
....|+|||||..|...|..|.+.|.+|+|++..... -|... +....|.-+ .++..+....+....+ .+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~-~i~~~~~~~dL~~adLVIaAT~d~~~N~~I 108 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLR-VKRKKVGEEDLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCE-EECSCCCGGGSSSCSEEEECCCCTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcE-EEECCCCHhHhCCCCEEEECCCCHHHHHHH
Confidence 4578999999999999999999999999999875321 12222 222222111 1333333222222222 33
Q ss_pred HHHHHHcCCceeEeeCCCeEEEEcC-----CCceEEecCC------HHHHHHHHHHhCCCcHHHHHHHHH
Q 008069 226 TQALAAVGCEMEVIPDPTTVHFHLP-----NDLSVRVHRE------YSDFVAELTSKFPHEKEGVLAFYG 284 (579)
Q Consensus 226 ~~~l~~~g~~~~~~~~~~~~~~~~~-----~g~~~~~~~~------~~~~~~~l~~~~p~~~~~i~~f~~ 284 (579)
.+..+ .|+.+....++....|.++ ++..+.+.++ .....+.+...+|.....+..+..
T Consensus 109 ~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~~~~~~ 177 (223)
T 3dfz_A 109 KQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQYTQFLY 177 (223)
T ss_dssp HHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHHHHHHH
T ss_pred HHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 44443 6777766665555555544 2334444442 123444556667655444444433
No 261
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.49 E-value=0.014 Score=60.59 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=34.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCc
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (579)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 36899999999999999999999999999999887643
No 262
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.43 E-value=0.077 Score=62.13 Aligned_cols=33 Identities=30% Similarity=0.300 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
.+|+|||||..|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999997 799999854
No 263
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.41 E-value=0.014 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999854
No 264
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.33 E-value=0.017 Score=50.32 Aligned_cols=33 Identities=36% Similarity=0.583 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|+|+|+|..|...|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 265
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.96 E-value=0.024 Score=47.27 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcC-CcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g-~~v~~~e~~~ 190 (579)
..+|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 368999999999999999999999 8999999854
No 266
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.93 E-value=0.027 Score=59.56 Aligned_cols=60 Identities=22% Similarity=0.284 Sum_probs=45.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+... ++ ......+.+.+++.|+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~-----------~~~~~~l~~~l~~~Gv~i 225 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS----------FD-----------PMISETLVEVMNAEGPQL 225 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------SC-----------HHHHHHHHHHHHHHSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh----------hh-----------HHHHHHHHHHHHHCCCEE
Confidence 368999999999999999999999999999998765321 11 112345667788888765
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 226 ~ 226 (450)
T 1ges_A 226 H 226 (450)
T ss_dssp E
T ss_pred E
Confidence 4
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.81 E-value=0.052 Score=57.14 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=47.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+++|||||..|+-+|..|++.|.+|+|+|+.+.+.... + ......+.+.+++.|+++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~----------d-----------~~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM----------D-----------ADMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS----------C-----------GGGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc----------c-----------chhHHHHHHHhhccceEE
Confidence 3589999999999999999999999999999987653221 1 123456788889999876
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 206 ~ 206 (437)
T 4eqs_A 206 R 206 (437)
T ss_dssp E
T ss_pred E
Confidence 5
No 268
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.77 E-value=0.021 Score=56.84 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 368999999999999999999999999999997643
No 269
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.63 E-value=0.04 Score=48.79 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4679999999999999999999999999999963
No 270
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.54 E-value=0.024 Score=56.88 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|...|..++.+|++|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 271
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.38 E-value=0.044 Score=58.13 Aligned_cols=36 Identities=25% Similarity=0.192 Sum_probs=33.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 368999999999999999999999999999998765
No 272
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.36 E-value=0.054 Score=46.70 Aligned_cols=56 Identities=2% Similarity=-0.157 Sum_probs=45.0
Q ss_pred cEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCCeEEEEEeecCCcCCC
Q 008069 428 REFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPP 485 (579)
Q Consensus 428 ~~i~Ad~VV~a~~~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~lg~~~~~~~~ 485 (579)
++++||.||+|+++..+ ..+.-.+.||..+.+.++...++.. .++++.+++++|..
T Consensus 4 ~~~~Ad~VIvTvP~~vL-~~I~F~P~LP~~k~~Ai~~l~~g~~-~Kv~l~f~~~FW~~ 59 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSL-RFVKVTPPFSYKKRRAVIETHYDQA-TKVLLEFSRRWWEF 59 (130)
T ss_dssp EEEEESEEEECSCHHHH-TTSEEESCCCHHHHHHHHHCCEECE-EEEEEEESSCGGGC
T ss_pred eEEEcCEEEEcCCHHHH-hcCcCCCCCCHHHHHHHHhCCCcce-eEEEEEECCCCCCC
Confidence 46899999999998764 4555555799998888888877664 59999999999864
No 273
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.30 E-value=0.024 Score=59.77 Aligned_cols=38 Identities=24% Similarity=0.508 Sum_probs=33.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCc
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (579)
.++|+|||.|.+|+++|..|+++|++|+++|.....-|
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 36799999999999999999999999999999776543
No 274
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.20 E-value=0.044 Score=57.97 Aligned_cols=35 Identities=31% Similarity=0.303 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...+|.|||.|.+|+++|..|+++|++|++.|+..
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35789999999999999999999999999999865
No 275
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=94.19 E-value=0.088 Score=57.06 Aligned_cols=37 Identities=41% Similarity=0.708 Sum_probs=34.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|++|||||++|+++|.+|++.|++|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999997653
No 276
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.05 E-value=0.048 Score=47.15 Aligned_cols=33 Identities=27% Similarity=0.219 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 569999999999999999999999999999853
No 277
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.00 E-value=0.05 Score=54.17 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.|||+|..|.+.|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 278
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.94 E-value=0.04 Score=54.64 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|+-+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999854
No 279
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.92 E-value=0.054 Score=49.42 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHc-CCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~-g~~v~~~e~~~ 190 (579)
..+|+|+|+|..|...|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 46799999999999999999999 99999999865
No 280
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.77 E-value=0.063 Score=54.32 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
...+|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34789999999999999999999998 999999865
No 281
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.44 E-value=0.088 Score=55.49 Aligned_cols=61 Identities=20% Similarity=0.182 Sum_probs=45.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+.... ++ ......+.+.+++.|+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------~~-----------~~~~~~l~~~l~~~Gv~i 208 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY---------FD-----------KEFTDILAKDYEAHGVNL 208 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT---------SC-----------HHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh---------hh-----------hhHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999999987653310 01 112345677788888865
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 209 ~ 209 (452)
T 2cdu_A 209 V 209 (452)
T ss_dssp E
T ss_pred E
Confidence 4
No 282
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.39 E-value=0.055 Score=54.44 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.|||+|..|.+.|..|+++|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 679999999999999999999999999999865
No 283
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.34 E-value=0.077 Score=52.31 Aligned_cols=33 Identities=27% Similarity=0.319 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999865
No 284
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.32 E-value=0.1 Score=56.65 Aligned_cols=60 Identities=23% Similarity=0.239 Sum_probs=45.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+.... + ......+.+.+++.|+++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------~-----------~~~~~~l~~~l~~~GV~i 209 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPV----------D-----------REMAGFAHQAIRDQGVDL 209 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTS----------C-----------HHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhc----------C-----------HHHHHHHHHHHHHCCCEE
Confidence 3589999999999999999999999999999977543210 1 112345667788888876
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 210 ~ 210 (565)
T 3ntd_A 210 R 210 (565)
T ss_dssp E
T ss_pred E
Confidence 4
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.31 E-value=0.061 Score=50.66 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999865
No 286
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.28 E-value=0.069 Score=53.63 Aligned_cols=33 Identities=30% Similarity=0.364 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|++.|++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999965
No 287
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.14 E-value=0.12 Score=53.67 Aligned_cols=61 Identities=26% Similarity=0.274 Sum_probs=46.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..... +......+.+.+++.|+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~--------------------~~~~~~~l~~~l~~~GV~i 211 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVA--------------------GEALSEFYQAEHRAHGVDL 211 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTS--------------------CHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhc--------------------CHHHHHHHHHHHHhCCCEE
Confidence 46899999999999999999999999999999887633210 0112345677788888876
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 212 ~ 212 (415)
T 3lxd_A 212 R 212 (415)
T ss_dssp E
T ss_pred E
Confidence 4
No 288
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.12 E-value=0.14 Score=50.75 Aligned_cols=53 Identities=13% Similarity=0.220 Sum_probs=42.2
Q ss_pred HHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeC---CCc--EEEcCEEEECCChhH
Q 008069 391 SLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATRWD 443 (579)
Q Consensus 391 aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~---dG~--~i~Ad~VV~a~~~~~ 443 (579)
.+.+.+++.|++++++++|++|..+++++.+|.+. +|+ ++.+|.||+++|...
T Consensus 195 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 195 AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 35566778899999999999998776656677764 675 689999999998643
No 289
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.11 E-value=0.11 Score=55.69 Aligned_cols=60 Identities=20% Similarity=0.226 Sum_probs=45.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc---CCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK---GARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~---g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g 233 (579)
..+++|||+|..|+-.|..|++. |.+|+|+|+.+.+... ++ ......+.+.+++.|
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~----------~d-----------~~~~~~l~~~l~~~G 249 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG----------FD-----------ETIREEVTKQLTANG 249 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT----------SC-----------HHHHHHHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc----------cC-----------HHHHHHHHHHHHhCC
Confidence 46899999999999999999999 9999999998765321 11 112345677788888
Q ss_pred Ccee
Q 008069 234 CEME 237 (579)
Q Consensus 234 ~~~~ 237 (579)
+++.
T Consensus 250 V~i~ 253 (495)
T 2wpf_A 250 IEIM 253 (495)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 8764
No 290
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.04 E-value=0.074 Score=53.20 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|++.|++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 291
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.89 E-value=0.095 Score=52.58 Aligned_cols=34 Identities=24% Similarity=0.164 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999865
No 292
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.85 E-value=0.11 Score=50.79 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999754
No 293
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.81 E-value=0.9 Score=47.88 Aligned_cols=128 Identities=21% Similarity=0.230 Sum_probs=71.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC-------CcceeEEeeCCeee-c-cccccccCCCCCC-ChHHHH
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP-------GGSSGYYERDGYTF-D-VGSSVMFGFSDKG-NLNLIT 226 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~-------gg~~~t~~~~g~~~-~-~G~~~~~g~~~~~-~~~~~~ 226 (579)
...|+|||+|..|...|..|.+.|.+|+|++..... .|... +....|.- + .|+..+....+.. ....+.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~-~~~~~~~~~~l~~~~lVi~at~~~~~n~~i~ 90 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLT-LVEGPFDETLLDSCWLAIAATDDDTVNQRVS 90 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCE-EEESSCCGGGGTTCSEEEECCSCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEE-EEECCCCccccCCccEEEEcCCCHHHHHHHH
Confidence 478999999999999999999999999999975321 12222 22222211 1 1333333222221 234466
Q ss_pred HHHHHcCCceeEeeCCCeEEEEcC-----CCceEEecCC------HHHHHHHHHHhCCCcHHHHHHHHHH
Q 008069 227 QALAAVGCEMEVIPDPTTVHFHLP-----NDLSVRVHRE------YSDFVAELTSKFPHEKEGVLAFYGE 285 (579)
Q Consensus 227 ~~l~~~g~~~~~~~~~~~~~~~~~-----~g~~~~~~~~------~~~~~~~l~~~~p~~~~~i~~f~~~ 285 (579)
+..++.|+.++...++....|.++ ++..+.+.++ .....+.+...+|.....+..+...
T Consensus 91 ~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~~~~~~~~~~~ 160 (457)
T 1pjq_A 91 DAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQHLGQVARYAGQ 160 (457)
T ss_dssp HHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTTHHHHHHHHHH
T ss_pred HHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 777888887765555443333331 2223333332 1234445666777655444444443
No 294
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.78 E-value=0.091 Score=51.54 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
+|.|||+|..|...|..|++.|++|++++|+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999999753
No 295
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.77 E-value=0.1 Score=48.93 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 296
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.76 E-value=0.13 Score=53.30 Aligned_cols=61 Identities=23% Similarity=0.184 Sum_probs=46.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..... +......+.+.+++.|+++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~--------------------~~~~~~~l~~~l~~~GV~i 201 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVV--------------------TPEISSYFHDRHSGAGIRM 201 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS--------------------CHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhcc--------------------CHHHHHHHHHHHHhCCcEE
Confidence 46899999999999999999999999999999876543210 0112345677788888876
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 202 ~ 202 (404)
T 3fg2_P 202 H 202 (404)
T ss_dssp E
T ss_pred E
Confidence 4
No 297
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=92.65 E-value=0.12 Score=54.17 Aligned_cols=37 Identities=27% Similarity=0.260 Sum_probs=33.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG 193 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~g 193 (579)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4789999999999999999999999999999987653
No 298
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.64 E-value=0.093 Score=55.87 Aligned_cols=34 Identities=35% Similarity=0.436 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5789999999999999999999999999999853
No 299
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.51 E-value=0.1 Score=53.30 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|.|||+|..|.+.|..|+++|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999863
No 300
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.48 E-value=0.15 Score=55.78 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=45.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+.... + ......+.+.+++.|+++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------~-----------~~~~~~l~~~l~~~GV~i 245 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPI----------D-----------YEMAAYVHEHMKNHDVEL 245 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS----------C-----------HHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccC----------C-----------HHHHHHHHHHHHHcCCEE
Confidence 4689999999999999999999999999999977653311 1 112345667788888765
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 246 ~ 246 (588)
T 3ics_A 246 V 246 (588)
T ss_dssp E
T ss_pred E
Confidence 4
No 301
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.47 E-value=0.17 Score=53.33 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
-.+|.|||+|..|...|..|+++|++|+++|++..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 36899999999999999999999999999999764
No 302
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.46 E-value=0.12 Score=53.71 Aligned_cols=61 Identities=20% Similarity=0.145 Sum_probs=46.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..... + ......+.+.+++.|+++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~---------~-----------~~~~~~l~~~l~~~GV~i 202 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVL---------G-----------RRIGAWLRGLLTELGVQV 202 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHH---------C-----------HHHHHHHHHHHHHHTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhc---------C-----------HHHHHHHHHHHHHCCCEE
Confidence 47899999999999999999999999999999876543210 0 112345667778888765
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 203 ~ 203 (410)
T 3ef6_A 203 E 203 (410)
T ss_dssp E
T ss_pred E
Confidence 4
No 303
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.43 E-value=0.14 Score=54.66 Aligned_cols=60 Identities=20% Similarity=0.166 Sum_probs=45.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+... ++ ......+.+.+++.|+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~d-----------~~~~~~l~~~l~~~GV~i 240 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY----------ED-----------ADAALVLEESFAERGVRL 240 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC----------SS-----------HHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc----------cC-----------HHHHHHHHHHHHHCCCEE
Confidence 468999999999999999999999999999998765321 11 112345677788888765
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 241 ~ 241 (499)
T 1xdi_A 241 F 241 (499)
T ss_dssp E
T ss_pred E
Confidence 3
No 304
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.38 E-value=0.097 Score=51.84 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|++.|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999974
No 305
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=92.37 E-value=0.19 Score=54.34 Aligned_cols=59 Identities=17% Similarity=0.221 Sum_probs=45.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+++|||||..|+-.|..+++.|.+|+|+++...+.+ + | ......+.+.|++.|+.+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~---------~--D-----------~ei~~~l~~~l~~~gi~~ 280 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG---------F--D-----------QQCAVKVKLYMEEQGVMF 280 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT---------S--C-----------HHHHHHHHHHHHHTTCEE
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc---------c--c-----------hhHHHHHHHHHHhhccee
Confidence 46899999999999999999999999999998554322 1 1 113445778888888866
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 281 ~ 281 (542)
T 4b1b_A 281 K 281 (542)
T ss_dssp E
T ss_pred e
Confidence 4
No 306
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.34 E-value=0.11 Score=51.69 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|++++|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999854
No 307
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.29 E-value=0.14 Score=51.58 Aligned_cols=33 Identities=18% Similarity=0.018 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHH-HHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLV-AATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~-~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 67999999999997 7888999999999999865
No 308
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.28 E-value=0.094 Score=51.99 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+++|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999864
No 309
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.22 E-value=0.14 Score=53.91 Aligned_cols=37 Identities=27% Similarity=0.161 Sum_probs=33.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG 193 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~g 193 (579)
..+++|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4689999999999999999999999999999987653
No 310
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.18 E-value=0.14 Score=51.22 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..++|.|||.|..|...|..|++.|++|++++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999999753
No 311
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.18 E-value=0.098 Score=51.88 Aligned_cols=35 Identities=23% Similarity=0.129 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999764
No 312
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.15 E-value=0.13 Score=53.19 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4789999999999999999999999999999865
No 313
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.09 E-value=0.12 Score=51.29 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|.|||.|..|...|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 314
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.08 E-value=0.12 Score=54.67 Aligned_cols=33 Identities=39% Similarity=0.469 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 315
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.08 E-value=0.14 Score=49.28 Aligned_cols=35 Identities=26% Similarity=0.267 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..++|.|||+|..|.+.|..|++.|++|++++|+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999865
No 316
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.95 E-value=0.13 Score=51.43 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
.++|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999999 999999864
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.92 E-value=0.14 Score=51.73 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
++|+|||+|..|.+.|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 68999999999999999999999999999984
No 318
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.90 E-value=0.14 Score=53.83 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..++.|||.|..|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999999999999999999999999999764
No 319
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.84 E-value=0.13 Score=52.66 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999864
No 320
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.77 E-value=0.15 Score=54.17 Aligned_cols=35 Identities=26% Similarity=0.189 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHHHc-CC-cEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK-GA-RVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~-g~-~v~~~e~~~~ 191 (579)
.++|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 36899999999999999999999 99 9999999765
No 321
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=91.59 E-value=0.21 Score=52.81 Aligned_cols=61 Identities=21% Similarity=0.163 Sum_probs=45.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc-CCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCc
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE 235 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~-g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~ 235 (579)
..+++|||+|..|+-+|..|++. |.+|+++++.+.+.... ++ ......+.+.+++.|++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------~~-----------~~~~~~l~~~l~~~GV~ 218 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------TS-----------KSLSQMLRHDLEKNDVV 218 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT---------SC-----------HHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc---------cC-----------HHHHHHHHHHHHhcCCE
Confidence 46899999999999999999999 99999999977553210 00 11234567778888876
Q ss_pred ee
Q 008069 236 ME 237 (579)
Q Consensus 236 ~~ 237 (579)
+.
T Consensus 219 i~ 220 (472)
T 3iwa_A 219 VH 220 (472)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 322
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.53 E-value=0.19 Score=53.29 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=33.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 478999999999999999999999999999997654
No 323
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.52 E-value=0.078 Score=56.19 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..++|+|+|+|-.|...|..|...|++|+|+|+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35789999999999999999999999999999975
No 324
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.50 E-value=0.15 Score=51.68 Aligned_cols=33 Identities=36% Similarity=0.426 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999853
No 325
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.45 E-value=0.2 Score=52.57 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=32.0
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 155 ~~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
....+|.|||.|..||..|..|+++|++|+.+|-+
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 34578999999999999999999999999999975
No 326
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.44 E-value=0.16 Score=51.28 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
.++|.|||+|..|.+.|..|+++|++|++++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478999999999999999999999999999985
No 327
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.40 E-value=0.16 Score=49.93 Aligned_cols=34 Identities=26% Similarity=0.251 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
++|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999999753
No 328
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.38 E-value=0.18 Score=50.86 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
.+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999865
No 329
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.30 E-value=0.19 Score=50.44 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3689999999999999999999998 999999864
No 330
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.27 E-value=0.24 Score=52.29 Aligned_cols=60 Identities=12% Similarity=0.050 Sum_probs=45.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+++|||+|..|+-.|..|++.|.+|+++++.+.+.... + ......+.+.+++.|+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~----------~-----------~~~~~~l~~~l~~~Gv~i 228 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRF----------D-----------QDMRRGLHAAMEEKGIRI 228 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS----------C-----------HHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc----------C-----------HHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999999987543210 1 112345677788888775
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 229 ~ 229 (463)
T 4dna_A 229 L 229 (463)
T ss_dssp E
T ss_pred E
Confidence 4
No 331
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.08 E-value=0.16 Score=50.63 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 468999999999999999999999999999997643
No 332
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.01 E-value=0.22 Score=46.85 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||+|..|...|..|++.|++|++++|+.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3679999999999999999999999999999864
No 333
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.00 E-value=0.16 Score=53.30 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999853
No 334
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.98 E-value=0.17 Score=50.57 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=30.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (579)
..++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999999 99999996
No 335
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.95 E-value=0.17 Score=50.31 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999998664
No 336
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.87 E-value=0.23 Score=49.69 Aligned_cols=33 Identities=30% Similarity=0.352 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (579)
..+|+|||+|..|.+.|..|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 337
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.86 E-value=0.19 Score=50.16 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|+ .|++|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999864
No 338
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.84 E-value=0.25 Score=49.21 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 339
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.82 E-value=0.086 Score=46.05 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|...|..|++.|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999853
No 340
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.81 E-value=0.19 Score=50.28 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=29.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|++.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 478999999999999999999999999999 643
No 341
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.81 E-value=0.21 Score=50.06 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999999864
No 342
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.80 E-value=0.18 Score=49.63 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
.+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4699999999999999999999999999999753
No 343
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.78 E-value=0.2 Score=49.92 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
+|+|||+|..|.+.|..|+..|+ +|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 899999864
No 344
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=90.76 E-value=0.18 Score=49.92 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 468999999999999999999999999999997654
No 345
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.75 E-value=0.16 Score=50.59 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=29.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc-----C-CcEEEEec
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVK-----G-ARVLVLEK 188 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~-----g-~~v~~~e~ 188 (579)
.++|.|||+|..|...|..|++. | ++|++++|
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999999 9 99999998
No 346
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.73 E-value=0.28 Score=52.18 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=45.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChHHHHHHHHHcCCce
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~~~~~~l~~~g~~~ 236 (579)
..+++|||+|..|+-.|..|++.|.+|+++++.+.+... ++ ......+.+.+++.|+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------~~-----------~~~~~~l~~~l~~~Gv~i 249 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN----------FD-----------YDLRQLLNDAMVAKGISI 249 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------SC-----------HHHHHHHHHHHHHHTCEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc----------cC-----------HHHHHHHHHHHHHCCCEE
Confidence 468999999999999999999999999999998754321 01 112345667778888765
Q ss_pred e
Q 008069 237 E 237 (579)
Q Consensus 237 ~ 237 (579)
.
T Consensus 250 ~ 250 (484)
T 3o0h_A 250 I 250 (484)
T ss_dssp E
T ss_pred E
Confidence 4
No 347
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=90.70 E-value=0.18 Score=50.44 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+|+|||+|..|+-.|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 47899999999999999999999999999998764
No 348
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.67 E-value=0.29 Score=48.73 Aligned_cols=34 Identities=32% Similarity=0.507 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 349
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.60 E-value=0.2 Score=48.29 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|..|..+|..|++.|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 799999864
No 350
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.58 E-value=0.22 Score=52.73 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 351
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.52 E-value=0.19 Score=50.35 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEec
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEK 188 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~ 188 (579)
+|.|||+|..|.+.|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 689999999999999999999999999998
No 352
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.48 E-value=0.2 Score=52.41 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=30.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..++|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999864
No 353
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.38 E-value=0.23 Score=50.74 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=31.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999999864
No 354
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.34 E-value=0.25 Score=48.22 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...++|+|+|.+|.++|..|++.|.+|+|++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4679999999999999999999999999999863
No 355
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.34 E-value=0.23 Score=51.52 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4789999999999999999999999999999854
No 356
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.18 E-value=0.28 Score=47.83 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+++|||+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999999999999965
No 357
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.17 E-value=0.11 Score=49.51 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..++|.|||+|..|.+.|..|+++|++|+++++..
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 34689999999999999999999999999999853
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.16 E-value=0.22 Score=51.84 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
+.+|+|||.|..|...|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46799999999999999999999999999998753
No 359
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.15 E-value=0.27 Score=51.92 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCc-EEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGAR-VLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~-v~~~e~~~~ 191 (579)
...+|+|||||..|+-+|..+.+.|.+ |++++|.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 357899999999999999999999985 999998664
No 360
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.06 E-value=0.21 Score=52.43 Aligned_cols=36 Identities=8% Similarity=-0.073 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCc-EEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGAR-VLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~-v~~~e~~~~~ 192 (579)
..+|+|||+|.+|+-.|..|++.|.+ |+++++.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 47899999999999999999999999 9999997643
No 361
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.01 E-value=0.27 Score=50.66 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...+|+|||+|.+|+.+|..+...|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999865
No 362
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.01 E-value=0.26 Score=49.36 Aligned_cols=35 Identities=20% Similarity=0.444 Sum_probs=30.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
...+|+|||+|..|.+.|..|+..|. +|+++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34789999999999999999999988 899999864
No 363
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.93 E-value=0.26 Score=48.83 Aligned_cols=33 Identities=27% Similarity=0.207 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 364
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.88 E-value=0.29 Score=49.27 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
...+|+|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 34789999999999999999999997 899999843
No 365
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.78 E-value=0.29 Score=48.82 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|++. |++|+++|++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3699999999999999999985 78999999965
No 366
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.73 E-value=0.28 Score=48.46 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999854
No 367
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.70 E-value=0.28 Score=45.61 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=29.6
Q ss_pred cEEEEC-CChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIG-SGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG-~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|+||| +|..|...|..|++.|++|++++|+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999999853
No 368
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.65 E-value=0.3 Score=50.06 Aligned_cols=35 Identities=34% Similarity=0.590 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
...+|+|+|||.+|..+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45899999999999999999999999 899999974
No 369
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.60 E-value=0.27 Score=52.30 Aligned_cols=33 Identities=33% Similarity=0.350 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.|||+|..|.+.|..|+++|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 370
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.58 E-value=0.26 Score=49.30 Aligned_cols=34 Identities=21% Similarity=0.141 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcC-CcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g-~~v~~~e~~~ 190 (579)
.++|.|||.|..|.+.|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 367999999999999999999999 9999999975
No 371
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.56 E-value=0.32 Score=49.71 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 372
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.45 E-value=0.19 Score=47.44 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEE-EecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLV-LEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~-~e~~~ 190 (579)
++|.|||+|..|.+.|..|++.|++|++ ++|+.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 6899999999999999999999999998 88754
No 373
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.39 E-value=0.29 Score=51.89 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCcEEEEecC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKY 189 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~ 189 (579)
++|.|||.|..|+..|..|++. |++|+++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5899999999999999999999 8999999985
No 374
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.36 E-value=0.54 Score=46.24 Aligned_cols=39 Identities=31% Similarity=0.422 Sum_probs=36.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
.+||+|||||++|+++|..|+++|++|+|+|+. +||...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~ 53 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLT 53 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeec
Confidence 589999999999999999999999999999998 888654
No 375
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.30 E-value=0.32 Score=49.69 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (579)
...+|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45899999999999999999999998 69999996
No 376
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.21 E-value=0.27 Score=48.11 Aligned_cols=34 Identities=9% Similarity=0.180 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...++|+|+|.+|.+.|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999999863
No 377
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.21 E-value=0.33 Score=51.99 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=43.4
Q ss_pred ccEEEECCChhHHHHHHHHHHc--------------CCcEEEEecCCCCCcceeEEeeCCeeeccccccccCCCCCCChH
Q 008069 158 YDAIVIGSGIGGLVAATQLAVK--------------GARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLN 223 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~--------------g~~v~~~e~~~~~gg~~~t~~~~g~~~~~G~~~~~g~~~~~~~~ 223 (579)
..++|||||++|+-+|..|+.. ..+|+|+|+.+.+-.... +....
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~---------------------~~~~~ 276 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFE---------------------KKLSS 276 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSC---------------------HHHHH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCC---------------------HHHHH
Confidence 3699999999999999888753 367999999886533211 12334
Q ss_pred HHHHHHHHcCCcee
Q 008069 224 LITQALAAVGCEME 237 (579)
Q Consensus 224 ~~~~~l~~~g~~~~ 237 (579)
...+.|++.|+++.
T Consensus 277 ~~~~~L~~~GV~v~ 290 (502)
T 4g6h_A 277 YAQSHLENTSIKVH 290 (502)
T ss_dssp HHHHHHHHTTCEEE
T ss_pred HHHHHHHhcceeee
Confidence 57788999998764
No 378
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.20 E-value=0.34 Score=48.29 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
.+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 899999854
No 379
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.14 E-value=0.3 Score=48.97 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
+|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999864
No 380
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.11 E-value=0.37 Score=48.39 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999999 999999865
No 381
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.01 E-value=0.36 Score=49.40 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999854
No 382
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.00 E-value=0.24 Score=51.46 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 383
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.86 E-value=0.35 Score=47.92 Aligned_cols=41 Identities=32% Similarity=0.416 Sum_probs=38.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCCccee
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (579)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 48999999999999999999999999999999999998763
No 384
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.86 E-value=0.3 Score=48.38 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=28.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
.+|.+||-|..|...|..|.++|++|++++|+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998653
No 385
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.85 E-value=0.33 Score=46.78 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHHcC-CcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g-~~v~~~e~~~ 190 (579)
+|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6899999999999999999999 9999999853
No 386
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.79 E-value=0.43 Score=47.68 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
..+|.|||.|..|.+.|..|++.|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 899999864
No 387
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.65 E-value=0.37 Score=47.34 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68999999999999999999999999999864
No 388
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.64 E-value=0.36 Score=47.84 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
...|+|||+|.+|.++|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899999863
No 389
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.61 E-value=0.37 Score=46.95 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999999999999999999854
No 390
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.40 E-value=0.45 Score=48.12 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||.|..|.+.|..|++.|++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999865
No 391
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.37 E-value=0.36 Score=48.10 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcC--CcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g--~~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|+++| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7899999854
No 392
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.36 E-value=0.46 Score=44.03 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=29.5
Q ss_pred cEEEECC-ChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999864
No 393
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.36 E-value=0.43 Score=50.69 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999975
No 394
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.32 E-value=0.48 Score=46.46 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=30.7
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 57999999 9999999999999999999999854
No 395
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.27 E-value=0.36 Score=51.30 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+.+|.|||+|..|.+.|..|+++|++|++++|+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35789999999999999999999999999999863
No 396
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.26 E-value=0.38 Score=47.62 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|+..|+ +|+++|+..
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 369999999999999999999998 899999854
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.22 E-value=0.44 Score=48.94 Aligned_cols=35 Identities=37% Similarity=0.485 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|+|||+|..|+.+|..++..|.+|+++|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35789999999999999999999999999999854
No 398
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.15 E-value=0.43 Score=50.77 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCcEEEEecC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKY 189 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~ 189 (579)
++|.|||+|..|+..|..|+++ |++|+++|++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5899999999999999999998 7999999975
No 399
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.14 E-value=0.46 Score=44.81 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=31.9
Q ss_pred CCccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+.|+|.|| |..|...|..|+++|++|+++.|+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999998 99999999999999999999999653
No 400
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.05 E-value=0.42 Score=47.87 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcC----CcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG----ARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g----~~v~~~e~~~ 190 (579)
.++|.|||+|..|.+.|..|++.| ++|++++|+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 357999999999999999999999 8999999865
No 401
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=88.04 E-value=0.43 Score=46.83 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 468999999999999999999999999999997754
No 402
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.01 E-value=0.23 Score=50.74 Aligned_cols=32 Identities=34% Similarity=0.304 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999853
No 403
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.98 E-value=0.5 Score=47.23 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|+..|. +|+++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998875 799999853
No 404
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.91 E-value=0.53 Score=45.72 Aligned_cols=51 Identities=16% Similarity=0.177 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCCCcEEEcCEEEECCChh
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~dG~~i~Ad~VV~a~~~~ 442 (579)
.+...+.+.+++.|++++. ++|++|..+ . .|.+.+|+++.+|.||+++|..
T Consensus 175 ~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~--~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVET-TRIREIAGH--A--DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp CCCHHHHHHHHHTTCEEEC-SCEEEEETT--E--EEEETTSCEEEESEEEECCEEE
T ss_pred CCCHHHHHHHHHCCcEEEc-ceeeeeecC--C--eEEeCCCCEEEEEEEEEccCcc
Confidence 3445567788999999985 899998632 2 5778999999999999998854
No 405
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.91 E-value=0.47 Score=50.66 Aligned_cols=34 Identities=21% Similarity=0.120 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||.|..|...|..|+++|++|++++|+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 406
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.87 E-value=0.42 Score=47.31 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.8
Q ss_pred ccEEEEC-CChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIG-SGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG-~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5799999 99999999999999999999999865
No 407
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.84 E-value=0.35 Score=49.55 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcC-------CcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKG-------ARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g-------~~v~~~e~~~~ 191 (579)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998764
No 408
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=87.81 E-value=0.46 Score=50.57 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|++++|+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 409
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.78 E-value=0.42 Score=47.02 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999854
No 410
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.76 E-value=0.55 Score=45.67 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
++|+|.|+|..|...+..|.++|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999999999999999999999999999653
No 411
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=87.74 E-value=0.52 Score=47.09 Aligned_cols=34 Identities=15% Similarity=0.247 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (579)
....++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 35789999999999999999999998 79999986
No 412
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.71 E-value=0.47 Score=45.65 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcC----CcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKG----ARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g----~~v~~~e~~~~ 191 (579)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999999 79999999764
No 413
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.69 E-value=0.35 Score=47.43 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+++|||+|.+|.++|..|++.|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4789999999999999999999998 899999865
No 414
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.67 E-value=0.52 Score=46.66 Aligned_cols=35 Identities=29% Similarity=0.337 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35789999999999999999999999999999864
No 415
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.64 E-value=0.48 Score=47.41 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=29.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--cEEEEecC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (579)
..+|+|||+|..|.+.|..|+..|. +|.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4789999999999999999999885 79999975
No 416
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.54 E-value=0.54 Score=46.39 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35789999999999999999999999999999864
No 417
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.48 E-value=0.44 Score=46.55 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|.+.|.+|++++|+.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999999863
No 418
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=87.48 E-value=0.31 Score=52.68 Aligned_cols=37 Identities=35% Similarity=0.601 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG 193 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~~g 193 (579)
..||+||||||.+|+.+|.+|++ |.+|+|+|+....+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 45999999999999999999999 99999999977643
No 419
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.48 E-value=0.58 Score=45.17 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
+++|||+|-+|.+++..|.+.|. +|+|++|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899999864
No 420
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.46 E-value=0.43 Score=49.91 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+.-|||.|..|+..|..|+++|++|+++|++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4678999999999999999999999999999864
No 421
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.44 E-value=0.54 Score=47.73 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
++|+|||||..|..+|..+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998664
No 422
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.41 E-value=0.9 Score=44.96 Aligned_cols=54 Identities=19% Similarity=0.186 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEe---CCCcEEEcCEEEECCChh
Q 008069 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGREFYAKTIISNATRW 442 (579)
Q Consensus 387 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~---~dG~~i~Ad~VV~a~~~~ 442 (579)
.+.+.+.+.+++.|+++++++ |++|..+++.+. +.+ .++.++.+|.||+|+|..
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~-v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSSKPFK-LWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEE-EEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEE-EEEEecCCCcEEEeCEEEECcCCC
Confidence 566677788888999999998 999988777665 555 467789999999999974
No 423
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.39 E-value=0.55 Score=47.04 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|..|.+.|..|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3689999999999999999999988 999999865
No 424
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.36 E-value=0.54 Score=43.71 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=29.7
Q ss_pred cEEEECC-ChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+|+|.|| |..|...+..|.++|++|+++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999864
No 425
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=87.31 E-value=0.25 Score=50.85 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcC--CcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g--~~v~~~e~~~~ 191 (579)
.++|+|||||++|+++|.+|++.| .+|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 368999999999999999999876 47999999775
No 426
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.30 E-value=0.32 Score=49.29 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcC-------CcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKG-------ARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g-------~~v~~~e~~~~ 191 (579)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 89999998764
No 427
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.28 E-value=0.44 Score=50.32 Aligned_cols=35 Identities=37% Similarity=0.308 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|+|+|+|..|.++|..|++.|.+|++.|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35789999999999999999999999999999864
No 428
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.27 E-value=0.54 Score=47.23 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
...+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 34789999999999999999999997 899999843
No 429
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.26 E-value=0.5 Score=52.90 Aligned_cols=33 Identities=27% Similarity=0.302 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 430
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.24 E-value=0.45 Score=46.47 Aligned_cols=32 Identities=28% Similarity=0.244 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 369999999999999999999 99999999864
No 431
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.24 E-value=0.49 Score=47.26 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
++|+|||+|..|.+.|..|+..|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 469999999999999999999987 899999865
No 432
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.17 E-value=0.56 Score=46.06 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
...+++|||+|-+|.++|..|++.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35789999999999999999999998 799999864
No 433
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.14 E-value=0.57 Score=46.04 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
....++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 35789999999999999999999998 699998853
No 434
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.11 E-value=0.52 Score=45.94 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
.+|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 369999999999999999999998 899998854
No 435
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.10 E-value=0.6 Score=44.67 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC----cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA----RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~----~v~~~e~~~ 190 (579)
++|.|||+|..|.+.|..|++.|+ +|++++|+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 436
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.10 E-value=0.5 Score=46.94 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
.+|+|||+|..|.+.|..|+.+|+ +|+++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 689999999999999999999998 899999865
No 437
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.06 E-value=0.48 Score=46.02 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|+|.|||..|...+..|.++|++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 679999999999999999999999999999865
No 438
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.05 E-value=0.5 Score=50.19 Aligned_cols=33 Identities=33% Similarity=0.433 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|+++|++|++++|+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999853
No 439
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.03 E-value=0.64 Score=45.57 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=31.4
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCCCC
Q 008069 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVIP 192 (579)
Q Consensus 158 ~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (579)
++|+|.|| |..|...+..|.++|++|+++-|++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 46999998 999999999999999999999887543
No 440
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=86.83 E-value=0.61 Score=45.53 Aligned_cols=35 Identities=11% Similarity=0.217 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
....++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35789999999999999999999996 899998853
No 441
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.76 E-value=0.59 Score=46.93 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=30.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (579)
...+|+|||+|..|.++|..|+..|. +++++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34789999999999999999999987 79999984
No 442
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.55 E-value=0.7 Score=45.24 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC---cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA---RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~---~v~~~e~~~ 190 (579)
++|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 679999999999999999999999 899999865
No 443
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=86.52 E-value=0.41 Score=49.91 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHcCceEEeCceeeEEEEeCCEEEEEEeCC----CcEEEcCEEEECCCh
Q 008069 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD----GREFYAKTIISNATR 441 (579)
Q Consensus 386 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~v~gV~~~d----G~~i~Ad~VV~a~~~ 441 (579)
..+...+.+.++++|++++++++|++|. +++ |++++ |+++.+|.||+++|.
T Consensus 200 ~~~~~~l~~~l~~~GV~i~~~~~v~~v~--~~~---v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE--PDK---VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC--SSE---EEEECTTSCEEEEECSEEEEECEE
T ss_pred hHHHHHHHHHHHHCCCEEEeCCEEEEEe--CCe---EEEEecCCCceEEeeeEEEECCCC
Confidence 3466778889999999999999999985 333 33444 678999999998763
No 444
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.51 E-value=0.51 Score=46.54 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|-.|..+|.+|++.|. +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5789999999999999999999997 699999754
No 445
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=86.43 E-value=0.53 Score=45.43 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEec
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEK 188 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~ 188 (579)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999999876
No 446
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.41 E-value=0.63 Score=45.67 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=31.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
....++|+|+|-+|.+.|..|++.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 35789999999999999999999996 899999853
No 447
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.38 E-value=0.54 Score=45.41 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCc-EEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGAR-VLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~-v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999854
No 448
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.25 E-value=0.5 Score=45.48 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 579999999999999999999999999999854
No 449
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=86.19 E-value=0.36 Score=49.98 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=28.2
Q ss_pred ccEEEECCChhHHHHHHHHHH-cCCcEEEEe
Q 008069 158 YDAIVIGSGIGGLVAATQLAV-KGARVLVLE 187 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~-~g~~v~~~e 187 (579)
++|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 579999999999999999998 599999999
No 450
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=86.18 E-value=0.72 Score=46.00 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (579)
....++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35789999999999999999999998 79999986
No 451
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.17 E-value=0.73 Score=46.32 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (579)
...+|+|||+|..|.+.|+.|+.+|. +++++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 45789999999999999999999987 79999975
No 452
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.11 E-value=0.28 Score=46.56 Aligned_cols=35 Identities=11% Similarity=0.119 Sum_probs=30.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
...+++|+|+|..|...|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34679999999999999999999999 999998753
No 453
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.91 E-value=0.53 Score=43.92 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=30.9
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
++|+|.|| |..|...+..|.++|++|+++.|...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 67999996 99999999999999999999999753
No 454
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.90 E-value=0.48 Score=52.96 Aligned_cols=34 Identities=35% Similarity=0.320 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
-.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 455
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=85.85 E-value=0.6 Score=47.90 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=34.3
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCC---cEEEEecCC-CCCcc
Q 008069 157 DYDAIVIGS-GIGGLVAATQLAVKGA---RVLVLEKYV-IPGGS 195 (579)
Q Consensus 157 ~~~v~viG~-g~~g~~~a~~l~~~g~---~v~~~e~~~-~~gg~ 195 (579)
..+|+|||+ |.+|+.|+..+...|. .|+++|.+. .-||.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 579999999 9999999999999998 899999976 44554
No 456
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.78 E-value=0.7 Score=44.51 Aligned_cols=34 Identities=29% Similarity=0.316 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4789999999999999999999998 699999854
No 457
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.77 E-value=0.75 Score=41.92 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+.|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999999865
No 458
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.73 E-value=0.7 Score=46.25 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=30.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (579)
++.+|+|||+|..|.+.|..|+..+. +++++|.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 35789999999999999999999886 79999974
No 459
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=85.73 E-value=0.73 Score=46.50 Aligned_cols=33 Identities=27% Similarity=0.233 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.|||+|..|.+.|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 579999999999999999999999999999864
No 460
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=85.64 E-value=0.53 Score=46.30 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=29.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...++|+|+|..|.++|..|++.| +|++++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 467999999999999999999999 999998853
No 461
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=85.60 E-value=0.66 Score=48.97 Aligned_cols=45 Identities=18% Similarity=0.340 Sum_probs=35.1
Q ss_pred cCceEEeCceeeEEEEeC-C-EEEEEEeC---------------CC--cEEEcCEEEECCChhH
Q 008069 399 KGSEILYKANVTKVILEQ-G-KAVGVRLS---------------DG--REFYAKTIISNATRWD 443 (579)
Q Consensus 399 ~G~~I~l~~~V~~I~~~~-~-~v~gV~~~---------------dG--~~i~Ad~VV~a~~~~~ 443 (579)
.|+++++++.+++|..++ + ++.+|++. +| +++.+|.||+++|...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 789999999999998653 4 66666653 34 4799999999999654
No 462
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.59 E-value=0.73 Score=46.12 Aligned_cols=37 Identities=22% Similarity=0.184 Sum_probs=31.0
Q ss_pred CCCccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 155 ADDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 155 ~~~~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
...+.|+|.|| |..|...+..|.++|++|+++.|...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34578999998 99999999999999999999999764
No 463
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=85.59 E-value=0.53 Score=46.20 Aligned_cols=32 Identities=31% Similarity=0.252 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 579999999999999999999999999998 54
No 464
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=85.57 E-value=0.79 Score=44.32 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
+++|||+|..|.+.|..|.+.|.+|++++|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 465
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=85.40 E-value=0.69 Score=46.17 Aligned_cols=34 Identities=32% Similarity=0.286 Sum_probs=30.5
Q ss_pred CCccEEEECCC-hhHHHHHHHHHHcCCcEEEEecC
Q 008069 156 DDYDAIVIGSG-IGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g-~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
...+|+|||+| +.|..+|..|.+.|..|++++|+
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 45899999999 67999999999999999999875
No 466
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.31 E-value=0.77 Score=46.21 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 5789999999999999999999998 599999854
No 467
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=85.30 E-value=0.72 Score=51.74 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=31.7
Q ss_pred CccEEEEC--CChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIG--SGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG--~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+||| +|..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 99999999999999999999999976
No 468
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.17 E-value=0.84 Score=44.76 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.8
Q ss_pred CccEEEEC-CChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIG-SGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG-~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...++|+| +|.+|.++|..|++.|.+|+++.|+.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 46799999 89999999999999999999999853
No 469
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.09 E-value=0.69 Score=48.02 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=32.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35789999999999999999999999999999864
No 470
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.03 E-value=0.86 Score=44.84 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=32.1
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
.+.|+|.|| |..|...+..|.++|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999998 99999999999999999999999764
No 471
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=84.91 E-value=0.84 Score=44.53 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (579)
..+++|||+|-+|.++|..|++.|. +|+|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4679999999999999999999997 79999985
No 472
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.90 E-value=0.77 Score=48.66 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|.|||+|..|...|..|++.|++|++++|+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3689999999999999999999999999999863
No 473
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.79 E-value=0.84 Score=46.54 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (579)
..+.|+|+|+|..|..+|..|.+.|.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3578999999999999999999999999999964
No 474
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=84.66 E-value=0.76 Score=50.16 Aligned_cols=37 Identities=38% Similarity=0.593 Sum_probs=33.9
Q ss_pred CCccEEEECCChhHHHHHHHHHH-cCCcEEEEecCCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAV-KGARVLVLEKYVIP 192 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~-~g~~v~~~e~~~~~ 192 (579)
..+|++|||+|.+|+++|..|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 79999999997654
No 475
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=84.58 E-value=0.95 Score=45.07 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=31.4
Q ss_pred CCccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+.|+|.|| |..|...+..|+++|++|+++.|..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3468999997 9999999999999999999999854
No 476
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=84.49 E-value=0.67 Score=51.00 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=40.9
Q ss_pred cCceEEeCceeeEEEEeCC--EEEEEEeC---CCc--EEEcCEEEECCChhHHHhhcc
Q 008069 399 KGSEILYKANVTKVILEQG--KAVGVRLS---DGR--EFYAKTIISNATRWDTFGKLL 449 (579)
Q Consensus 399 ~G~~I~l~~~V~~I~~~~~--~v~gV~~~---dG~--~i~Ad~VV~a~~~~~~~~~Ll 449 (579)
.|++|++++.|++|..+++ +++||++. +|+ ++.||.||+++|.......|+
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 4899999999999998753 78888875 455 588999999999887654443
No 477
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=84.40 E-value=0.67 Score=49.43 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=30.7
Q ss_pred CCccEEEECCChhHHH-HHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLV-AATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~-~a~~l~~~g~~v~~~e~~~ 190 (579)
...+|.|||.|.+|++ +|..|.++|++|++.|...
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3478999999999997 6999999999999999754
No 478
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=84.18 E-value=0.7 Score=46.09 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=29.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+|+|||+|..|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 478999999999999999999998 699998863
No 479
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.18 E-value=0.95 Score=45.73 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=30.0
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 157 DYDAIVIGS-GIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~-g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
..+|+|||+ |..|.++|+.|+..|. +|+++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999997 9999999999999985 799999743
No 480
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.09 E-value=0.98 Score=45.48 Aligned_cols=36 Identities=19% Similarity=0.082 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
....|.|||.|..|...|..|+..|++|+++++...
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 456899999999999999999999999999998653
No 481
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=83.93 E-value=0.9 Score=47.07 Aligned_cols=35 Identities=31% Similarity=0.458 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
....|+|||+|..|..+|..|...|. +|++++|..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35789999999999999999999998 899999864
No 482
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=83.92 E-value=0.9 Score=46.13 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
..+|+|||+|..|..+|..|++.|. +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4789999999999999999999998 599999754
No 483
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.86 E-value=0.8 Score=48.64 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|+|||.|..|..+|..|...|.+|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999854
No 484
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=83.79 E-value=0.9 Score=45.02 Aligned_cols=33 Identities=27% Similarity=0.207 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
.+|.+||-|..|...|..|.++|++|++++|++
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 485
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=83.67 E-value=1.3 Score=45.32 Aligned_cols=36 Identities=22% Similarity=0.185 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
....|+|||+|..|...|..+.+.|++|++++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 456899999999999999999999999999997653
No 486
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=83.66 E-value=1.5 Score=44.81 Aligned_cols=36 Identities=25% Similarity=0.189 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
....|.|||+|..|...|..+.+.|++|++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 457899999999999999999999999999998654
No 487
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.35 E-value=1.1 Score=44.97 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=30.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--cEEEEecC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (579)
.+.+|+|||+|..|.+.|..|+..+. +++++|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 35799999999999999999998886 79999974
No 488
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=83.33 E-value=0.93 Score=45.23 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=29.7
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcC--CcEEEEecCC
Q 008069 158 YDAIVIGS-GIGGLVAATQLAVKG--ARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~-g~~g~~~a~~l~~~g--~~v~~~e~~~ 190 (579)
++|+|||| |..|.+.|..|+..| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999988 6899999865
No 489
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=83.86 E-value=0.23 Score=46.24 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
.++|.|||+|..|.+.|..|.+.|++|++++|...
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 36799999999999999999999999999998653
No 490
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.21 E-value=0.94 Score=50.69 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
-.+|.|||+|..|...|..++..|++|+++|..+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 4689999999999999999999999999999865
No 491
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.07 E-value=1 Score=45.19 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|.|||.|..|...|..|+..|++|+++++..
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999999865
No 492
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.95 E-value=1 Score=44.76 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHHcCC-cEEEEecCC
Q 008069 159 DAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (579)
Q Consensus 159 ~v~viG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (579)
+|+|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999864
No 493
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=82.87 E-value=1 Score=44.49 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC--cEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (579)
++|.|||+|..|.++|+.|..+|. +++++|...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 479999999999999999998875 699999753
No 494
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=82.82 E-value=1.9 Score=44.83 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcC--CcEEEEecCCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVI 191 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~g--~~v~~~e~~~~ 191 (579)
++|+|||||++|+++|..|++.+ ++|+|+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 57999999999999999999876 78999999874
No 495
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=82.74 E-value=0.98 Score=46.94 Aligned_cols=35 Identities=37% Similarity=0.241 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
....|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 35789999999999999999999999999999854
No 496
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.49 E-value=1.2 Score=42.81 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=30.5
Q ss_pred CCccEEEECC-C-hhHHHHHHHHHHcCCcEEEEecCC
Q 008069 156 DDYDAIVIGS-G-IGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 156 ~~~~v~viG~-g-~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
..+.|+|.|| | -.|...|..|+++|++|++++|+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3467999998 7 599999999999999999999854
No 497
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=82.45 E-value=1.4 Score=43.83 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=31.7
Q ss_pred CCccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 156 DDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 156 ~~~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
..+.|+|.|| |..|...|..|+++|++|++++|...
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 3468999995 99999999999999999999998654
No 498
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=82.44 E-value=1.7 Score=41.02 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.1
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCCcEEEEecCC
Q 008069 157 DYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (579)
Q Consensus 157 ~~~v~viG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (579)
...|+|.|| |..|...|..|+++|++|+++.|+.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 467999997 8999999999999999999998853
No 499
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.31 E-value=0.96 Score=41.97 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=30.1
Q ss_pred cEEEEC-CChhHHHHHHHHHHcCCcEEEEecCCC
Q 008069 159 DAIVIG-SGIGGLVAATQLAVKGARVLVLEKYVI 191 (579)
Q Consensus 159 ~v~viG-~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (579)
+|+|.| +|..|...+..|.++|++|+++.|...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 689999 599999999999999999999999753
No 500
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.26 E-value=1.2 Score=43.63 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCcEEEEecCC
Q 008069 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYV 190 (579)
Q Consensus 158 ~~v~viG~g~~g~~~a~~l~~~--g~~v~~~e~~~ 190 (579)
++|.|||+|..|.+.|..|++. |++|++++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999988 67899998753
Done!