Query 008070
Match_columns 579
No_of_seqs 753 out of 3687
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 19:04:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008070.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008070hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532 Permease of the major 100.0 1.3E-33 2.8E-38 294.2 33.0 367 208-574 75-449 (466)
2 COG2814 AraJ Arabinose efflux 100.0 1.1E-32 2.3E-37 275.6 37.3 341 208-577 50-391 (394)
3 COG2271 UhpC Sugar phosphate p 100.0 3.1E-33 6.8E-38 275.0 26.9 360 207-574 65-436 (448)
4 PRK11663 regulatory protein Uh 100.0 6E-32 1.3E-36 285.4 35.7 366 206-578 58-430 (434)
5 PRK03545 putative arabinose tr 100.0 2.2E-31 4.8E-36 277.5 38.7 339 206-574 44-382 (390)
6 TIGR00893 2A0114 d-galactonate 100.0 2.1E-31 4.6E-36 277.1 37.7 362 206-570 29-397 (399)
7 TIGR00894 2A0114euk Na(+)-depe 100.0 3.9E-31 8.4E-36 282.2 38.9 370 204-573 74-451 (465)
8 PRK09556 uhpT sugar phosphate 100.0 2.2E-31 4.8E-36 283.8 32.2 357 207-572 65-449 (467)
9 PRK11273 glpT sn-glycerol-3-ph 100.0 1.6E-29 3.4E-34 268.5 38.1 364 206-573 63-436 (452)
10 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8.8E-30 1.9E-34 266.9 35.5 347 205-562 42-411 (412)
11 PRK10406 alpha-ketoglutarate t 100.0 2.9E-29 6.4E-34 264.9 37.9 346 208-577 65-429 (432)
12 PRK09705 cynX putative cyanate 100.0 2.6E-29 5.6E-34 261.8 36.3 340 205-576 43-385 (393)
13 TIGR00903 2A0129 major facilit 100.0 4.7E-29 1E-33 256.3 37.5 336 207-570 27-363 (368)
14 PRK10213 nepI ribonucleoside t 100.0 7.5E-29 1.6E-33 258.3 39.2 328 207-566 56-385 (394)
15 PRK10642 proline/glycine betai 100.0 9.4E-29 2E-33 265.0 40.1 347 212-571 63-429 (490)
16 PRK10091 MFS transport protein 100.0 1.3E-28 2.8E-33 255.8 37.0 338 207-574 39-378 (382)
17 PRK11551 putative 3-hydroxyphe 100.0 1.2E-28 2.7E-33 258.3 36.4 344 207-574 51-398 (406)
18 TIGR00890 2A0111 Oxalate/Forma 100.0 5.3E-29 1.1E-33 257.6 33.1 338 205-565 37-375 (377)
19 TIGR00712 glpT glycerol-3-phos 100.0 5.4E-29 1.2E-33 263.3 33.5 365 208-576 63-437 (438)
20 PRK03699 putative transporter; 100.0 1.4E-28 3.1E-33 256.6 33.7 338 207-573 43-381 (394)
21 PRK09952 shikimate transporter 100.0 5.8E-28 1.3E-32 255.2 38.7 345 211-573 69-434 (438)
22 PLN00028 nitrate transmembrane 100.0 7.4E-28 1.6E-32 256.8 39.7 346 214-572 79-433 (476)
23 PRK15402 multidrug efflux syst 100.0 1.1E-27 2.3E-32 251.2 40.0 342 207-568 49-391 (406)
24 TIGR01299 synapt_SV2 synaptic 100.0 7.5E-28 1.6E-32 263.6 39.9 342 217-571 213-733 (742)
25 TIGR00897 2A0118 polyol permea 100.0 1E-27 2.2E-32 250.8 38.7 348 207-572 49-401 (402)
26 TIGR00899 2A0120 sugar efflux 100.0 5.2E-28 1.1E-32 250.5 36.0 338 206-571 33-373 (375)
27 TIGR00881 2A0104 phosphoglycer 100.0 4.8E-29 1E-33 258.1 27.3 343 206-554 30-379 (379)
28 PRK14995 methyl viologen resis 100.0 5.5E-28 1.2E-32 259.3 33.4 330 208-546 43-412 (495)
29 TIGR00710 efflux_Bcr_CflA drug 100.0 3.1E-27 6.8E-32 245.5 38.1 324 207-551 41-365 (385)
30 TIGR00900 2A0121 H+ Antiporter 100.0 1.1E-27 2.5E-32 246.6 33.6 329 205-549 33-365 (365)
31 PRK12307 putative sialic acid 100.0 1.7E-27 3.6E-32 251.3 35.2 337 208-559 55-395 (426)
32 TIGR00891 2A0112 putative sial 100.0 1.2E-27 2.7E-32 250.2 33.0 339 208-557 49-401 (405)
33 PRK15034 nitrate/nitrite trans 100.0 6.7E-27 1.5E-31 242.3 36.8 331 213-573 77-455 (462)
34 TIGR00879 SP MFS transporter, 100.0 8.8E-28 1.9E-32 256.6 31.4 367 205-575 70-473 (481)
35 PRK09874 drug efflux system pr 100.0 5.9E-27 1.3E-31 245.6 36.9 343 207-575 55-401 (408)
36 PRK15403 multidrug efflux syst 100.0 1.4E-26 3E-31 242.7 39.3 336 208-564 53-389 (413)
37 PRK11102 bicyclomycin/multidru 100.0 1E-26 2.2E-31 241.2 37.6 349 206-575 26-375 (377)
38 COG2223 NarK Nitrate/nitrite t 100.0 4.6E-28 9.9E-33 239.3 25.9 347 209-574 52-403 (417)
39 PRK10489 enterobactin exporter 100.0 3.2E-27 7E-32 248.4 34.0 344 205-571 51-398 (417)
40 PRK05122 major facilitator sup 100.0 9.2E-27 2E-31 243.5 36.0 337 205-575 50-392 (399)
41 PRK15075 citrate-proton sympor 100.0 7.7E-27 1.7E-31 246.6 35.7 315 214-550 64-397 (434)
42 TIGR00883 2A0106 metabolite-pr 100.0 2.4E-27 5.1E-32 246.7 30.8 331 211-562 40-391 (394)
43 PF07690 MFS_1: Major Facilita 100.0 6E-28 1.3E-32 247.4 25.4 316 208-538 34-352 (352)
44 PRK10077 xylE D-xylose transpo 100.0 1E-26 2.2E-31 249.1 35.3 362 206-574 55-459 (479)
45 PRK12382 putative transporter; 100.0 2.3E-26 5.1E-31 239.8 37.0 335 205-573 50-390 (392)
46 PRK10504 putative transporter; 100.0 1.7E-26 3.8E-31 246.8 36.6 333 210-551 49-419 (471)
47 TIGR00711 efflux_EmrB drug res 100.0 2.6E-27 5.6E-32 254.2 30.2 330 208-547 39-410 (485)
48 PRK11010 ampG muropeptide tran 100.0 4.5E-26 9.7E-31 243.6 39.2 335 221-573 60-404 (491)
49 TIGR00892 2A0113 monocarboxyla 100.0 5.1E-27 1.1E-31 249.0 31.5 337 220-567 68-416 (455)
50 PRK03633 putative MFS family t 100.0 4.3E-26 9.2E-31 236.9 37.0 332 205-571 40-371 (381)
51 PRK11646 multidrug resistance 100.0 3.9E-26 8.4E-31 238.4 36.2 340 205-574 45-390 (400)
52 PRK11043 putative transporter; 100.0 9.5E-26 2.1E-30 236.0 38.6 325 206-556 41-366 (401)
53 PRK11195 lysophospholipid tran 100.0 3.1E-26 6.7E-31 238.5 34.4 341 206-573 38-381 (393)
54 TIGR00898 2A0119 cation transp 100.0 4.8E-26 1E-30 245.7 36.5 348 205-571 126-494 (505)
55 PRK15011 sugar efflux transpor 100.0 9.6E-26 2.1E-30 235.1 36.5 336 207-572 52-391 (393)
56 PRK10473 multidrug efflux syst 100.0 1.6E-25 3.5E-30 233.5 38.1 325 207-561 39-363 (392)
57 cd06174 MFS The Major Facilita 100.0 7.5E-26 1.6E-30 231.4 34.9 316 206-570 34-350 (352)
58 TIGR00887 2A0109 phosphate:H+ 100.0 7.6E-26 1.7E-30 243.4 34.8 357 207-569 57-486 (502)
59 PRK11652 emrD multidrug resist 100.0 4.8E-25 1E-29 230.1 39.0 322 206-551 43-364 (394)
60 PRK03893 putative sialic acid 100.0 4.5E-26 9.8E-31 245.3 31.3 347 208-565 57-446 (496)
61 PF05977 MFS_3: Transmembrane 100.0 3.9E-25 8.5E-30 234.7 36.6 346 205-571 44-393 (524)
62 PRK10054 putative transporter; 100.0 1.9E-25 4E-30 232.8 33.1 338 205-569 42-381 (395)
63 PRK06814 acylglycerophosphoeth 99.9 1.9E-25 4E-30 263.7 36.3 347 206-566 52-416 (1140)
64 PRK10133 L-fucose transporter; 99.9 7E-25 1.5E-29 231.1 36.4 335 206-566 61-427 (438)
65 TIGR00895 2A0115 benzoate tran 99.9 1.3E-25 2.8E-30 234.1 30.6 327 207-544 53-397 (398)
66 TIGR00902 2A0127 phenyl propri 99.9 9.3E-25 2E-29 226.8 35.5 332 204-567 37-374 (382)
67 PRK11902 ampG muropeptide tran 99.9 3.6E-24 7.9E-29 224.0 39.1 344 207-573 35-391 (402)
68 KOG3764 Vesicular amine transp 99.9 5.2E-26 1.1E-30 221.2 20.8 343 205-573 105-455 (464)
69 PRK11128 putative 3-phenylprop 99.9 2.9E-24 6.3E-29 223.1 34.8 333 204-567 37-374 (382)
70 TIGR00885 fucP L-fucose:H+ sym 99.9 4.9E-24 1.1E-28 222.7 35.5 333 205-563 37-403 (410)
71 TIGR00896 CynX cyanate transpo 99.9 2.5E-24 5.5E-29 221.4 32.6 312 206-549 35-350 (355)
72 PRK08633 2-acyl-glycerophospho 99.9 2.9E-24 6.4E-29 254.2 36.7 343 205-564 46-402 (1146)
73 TIGR00886 2A0108 nitrite extru 99.9 1.6E-24 3.5E-29 223.6 29.2 316 206-533 37-365 (366)
74 KOG2533 Permease of the major 99.9 1E-24 2.2E-29 228.1 27.4 242 208-451 83-336 (495)
75 KOG2504 Monocarboxylate transp 99.9 1E-24 2.2E-29 230.4 27.2 354 208-572 83-476 (509)
76 KOG1330 Sugar transporter/spin 99.9 2.9E-26 6.4E-31 228.0 13.2 336 209-551 71-417 (493)
77 PRK09528 lacY galactoside perm 99.9 1.3E-23 2.8E-28 221.2 31.2 351 205-575 45-406 (420)
78 KOG0569 Permease of the major 99.9 9.6E-23 2.1E-27 210.3 36.1 367 206-577 60-459 (485)
79 TIGR00882 2A0105 oligosacchari 99.9 8E-23 1.7E-27 213.5 33.7 346 205-570 37-393 (396)
80 KOG2615 Permease of the major 99.9 1.1E-23 2.4E-28 203.8 21.8 351 205-565 67-433 (451)
81 TIGR00901 2A0125 AmpG-related 99.9 2.8E-22 6.2E-27 206.2 33.3 292 223-531 38-355 (356)
82 TIGR00792 gph sugar (Glycoside 99.9 1.1E-22 2.3E-27 215.5 30.3 326 205-551 34-384 (437)
83 TIGR02718 sider_RhtX_FptX side 99.9 8.7E-22 1.9E-26 205.2 36.6 342 206-567 36-386 (390)
84 TIGR00889 2A0110 nucleoside tr 99.9 6.2E-22 1.3E-26 207.7 35.0 341 205-574 37-404 (418)
85 TIGR00924 yjdL_sub1_fam amino 99.9 5.7E-22 1.2E-26 211.0 33.7 366 207-574 49-470 (475)
86 COG2807 CynX Cyanate permease 99.9 1.7E-21 3.6E-26 188.6 32.0 340 205-575 46-388 (395)
87 COG0738 FucP Fucose permease [ 99.9 1.2E-21 2.6E-26 192.5 30.8 341 206-572 48-409 (422)
88 PRK10207 dipeptide/tripeptide 99.9 4.3E-21 9.3E-26 204.3 32.4 352 215-571 59-475 (489)
89 PF11700 ATG22: Vacuole efflux 99.9 8.3E-20 1.8E-24 192.1 40.8 358 206-575 70-471 (477)
90 PF06609 TRI12: Fungal trichot 99.9 1.3E-20 2.8E-25 199.5 34.3 314 224-546 96-466 (599)
91 TIGR00805 oat sodium-independe 99.9 4.4E-22 9.6E-27 217.7 22.7 241 214-454 76-397 (633)
92 KOG0254 Predicted transporter 99.9 7.5E-21 1.6E-25 204.9 30.7 365 206-575 89-486 (513)
93 KOG0255 Synaptic vesicle trans 99.9 4.6E-19 1E-23 191.8 38.3 349 203-568 115-488 (521)
94 KOG0253 Synaptic vesicle trans 99.9 5.7E-20 1.2E-24 176.8 27.0 349 210-574 117-521 (528)
95 TIGR01272 gluP glucose/galacto 99.9 1.7E-19 3.7E-24 181.0 29.6 276 260-560 9-303 (310)
96 PRK09669 putative symporter Ya 99.8 2E-18 4.4E-23 183.0 32.1 322 205-550 44-391 (444)
97 PRK09584 tppB putative tripept 99.8 5.4E-18 1.2E-22 181.5 34.7 343 223-571 74-478 (500)
98 PF03825 Nuc_H_symport: Nucleo 99.8 8.1E-18 1.8E-22 173.8 34.4 344 204-573 35-396 (400)
99 TIGR00806 rfc RFC reduced fola 99.8 6.6E-19 1.4E-23 179.3 25.5 348 208-566 64-442 (511)
100 TIGR01301 GPH_sucrose GPH fami 99.8 6.9E-18 1.5E-22 176.5 33.5 362 206-576 39-475 (477)
101 KOG0252 Inorganic phosphate tr 99.8 1.5E-20 3.2E-25 186.5 12.5 355 207-572 85-498 (538)
102 PF13347 MFS_2: MFS/sugar tran 99.8 2.4E-18 5.1E-23 181.6 27.4 325 206-551 37-388 (428)
103 KOG2563 Permease of the major 99.8 3.5E-18 7.6E-23 170.1 24.8 363 198-574 36-452 (480)
104 PF00083 Sugar_tr: Sugar (and 99.8 2.6E-24 5.7E-29 228.7 -20.2 367 204-576 44-440 (451)
105 KOG4686 Predicted sugar transp 99.8 7.4E-19 1.6E-23 163.3 18.3 329 224-574 97-445 (459)
106 PRK10429 melibiose:sodium symp 99.8 1.4E-17 3E-22 177.9 30.9 331 205-550 41-396 (473)
107 PF01306 LacY_symp: LacY proto 99.8 1.8E-17 3.9E-22 168.1 28.4 353 205-577 42-405 (412)
108 PTZ00207 hypothetical protein; 99.8 7.3E-17 1.6E-21 172.2 33.0 339 224-572 79-552 (591)
109 COG2270 Permeases of the major 99.8 4.8E-17 1E-21 161.4 29.0 350 209-574 61-431 (438)
110 PRK09848 glucuronide transport 99.8 6.7E-17 1.4E-21 171.6 29.9 323 205-550 43-391 (448)
111 COG2211 MelB Na+/melibiose sym 99.8 2.2E-16 4.7E-21 161.8 30.8 326 207-550 49-399 (467)
112 TIGR00788 fbt folate/biopterin 99.8 1.5E-17 3.2E-22 176.7 22.7 328 223-564 77-435 (468)
113 PRK11462 putative transporter; 99.8 9.1E-16 2E-20 162.9 35.7 320 207-550 46-390 (460)
114 PF03209 PUCC: PUCC protein; 99.8 1.8E-15 4E-20 150.8 35.2 352 205-573 14-399 (403)
115 PRK15462 dipeptide/tripeptide 99.8 1.4E-15 3.1E-20 159.8 36.0 352 210-564 49-469 (493)
116 COG3104 PTR2 Dipeptide/tripept 99.7 2.4E-14 5.2E-19 145.5 24.0 359 215-573 70-488 (498)
117 KOG2816 Predicted transporter 99.6 3.2E-14 7E-19 148.3 20.5 317 214-547 70-392 (463)
118 KOG2325 Predicted transporter/ 99.6 1.8E-13 4E-18 140.7 21.9 355 207-574 72-477 (488)
119 KOG3626 Organic anion transpor 99.5 6.5E-12 1.4E-16 134.5 29.6 231 224-454 150-459 (735)
120 TIGR00880 2_A_01_02 Multidrug 99.5 5.1E-13 1.1E-17 116.9 14.4 132 216-349 8-139 (141)
121 PF03092 BT1: BT1 family; Int 99.5 2.9E-12 6.3E-17 134.5 21.2 346 222-575 40-416 (433)
122 PF03137 OATP: Organic Anion T 99.4 1.2E-14 2.7E-19 155.3 -0.5 340 206-547 38-514 (539)
123 PRK10054 putative transporter; 99.4 3E-11 6.4E-16 126.1 20.5 174 387-570 6-180 (395)
124 PF05631 DUF791: Protein of un 99.4 1.8E-10 3.9E-15 113.5 23.8 227 207-451 70-305 (354)
125 PRK10489 enterobactin exporter 99.3 6.6E-11 1.4E-15 124.5 20.0 188 379-571 8-196 (417)
126 TIGR01299 synapt_SV2 synaptic 99.3 2.7E-11 5.8E-16 133.7 16.2 142 206-351 595-736 (742)
127 PRK11663 regulatory protein Uh 99.3 1.8E-10 3.8E-15 121.9 21.7 171 388-568 23-194 (434)
128 COG2271 UhpC Sugar phosphate p 99.3 5.3E-11 1.1E-15 118.6 15.6 179 388-576 29-210 (448)
129 PRK11646 multidrug resistance 99.3 1.9E-10 4.2E-15 120.1 20.6 171 391-571 13-184 (400)
130 PRK05122 major facilitator sup 99.3 1.7E-10 3.6E-15 120.7 19.5 177 386-565 13-192 (399)
131 PRK15462 dipeptide/tripeptide 99.3 2.7E-10 5.9E-15 120.1 20.6 177 387-571 8-188 (493)
132 TIGR00889 2A0110 nucleoside tr 99.3 7.1E-11 1.5E-15 124.1 15.8 144 209-352 254-406 (418)
133 TIGR00924 yjdL_sub1_fam amino 99.3 2.5E-10 5.5E-15 121.8 19.7 176 388-572 10-192 (475)
134 PRK10504 putative transporter; 99.3 4E-10 8.6E-15 120.6 21.0 176 387-571 9-184 (471)
135 PRK12382 putative transporter; 99.3 2.8E-10 6E-15 118.7 19.1 174 386-561 13-188 (392)
136 TIGR00900 2A0121 H+ Antiporter 99.3 2.5E-10 5.3E-15 117.4 18.5 175 392-571 3-178 (365)
137 PRK09584 tppB putative tripept 99.3 6E-10 1.3E-14 119.6 21.7 180 384-570 16-199 (500)
138 PRK09528 lacY galactoside perm 99.2 2.6E-10 5.7E-15 120.1 18.3 182 384-572 6-191 (420)
139 TIGR00710 efflux_Bcr_CflA drug 99.2 5.5E-10 1.2E-14 115.9 19.9 171 393-573 10-181 (385)
140 PF07690 MFS_1: Major Facilita 99.2 3.2E-10 7E-15 115.9 17.9 167 394-568 2-168 (352)
141 PRK03545 putative arabinose tr 99.2 5.9E-10 1.3E-14 116.2 20.1 172 390-571 11-183 (390)
142 TIGR00903 2A0129 major facilit 99.2 5.5E-10 1.2E-14 115.1 19.2 162 402-573 5-166 (368)
143 PRK10207 dipeptide/tripeptide 99.2 9.9E-10 2.1E-14 117.4 20.5 178 387-571 13-193 (489)
144 PRK10091 MFS transport protein 99.2 9.6E-10 2.1E-14 114.3 19.9 173 388-570 3-176 (382)
145 PRK09874 drug efflux system pr 99.2 1.3E-09 2.8E-14 114.2 20.8 173 389-571 15-192 (408)
146 PRK10213 nepI ribonucleoside t 99.2 1.7E-09 3.8E-14 112.7 21.3 157 403-569 35-192 (394)
147 PRK14995 methyl viologen resis 99.2 1.6E-09 3.5E-14 116.5 21.6 175 389-573 7-183 (495)
148 PF01770 Folate_carrier: Reduc 99.2 2E-08 4.3E-13 102.0 27.6 302 224-536 59-391 (412)
149 TIGR00886 2A0108 nitrite extru 99.2 1.4E-09 2.9E-14 112.2 19.8 170 389-567 2-183 (366)
150 PRK11043 putative transporter; 99.2 2.2E-09 4.9E-14 112.2 21.6 167 399-573 14-182 (401)
151 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.5E-09 3.2E-14 114.0 20.0 173 390-571 10-188 (412)
152 COG2814 AraJ Arabinose efflux 99.2 2.2E-09 4.8E-14 108.4 20.2 177 387-573 12-189 (394)
153 PRK10473 multidrug efflux syst 99.2 2.6E-09 5.6E-14 111.4 21.2 173 390-571 5-177 (392)
154 TIGR00711 efflux_EmrB drug res 99.2 9.1E-10 2E-14 118.2 18.2 172 391-572 5-177 (485)
155 TIGR00899 2A0120 sugar efflux 99.2 1.7E-09 3.7E-14 111.8 19.5 169 394-571 3-175 (375)
156 TIGR00897 2A0118 polyol permea 99.2 1.8E-09 4E-14 113.0 19.7 175 387-567 12-188 (402)
157 TIGR00882 2A0105 oligosacchari 99.2 1.2E-09 2.6E-14 114.1 17.9 179 387-571 1-182 (396)
158 PLN00028 nitrate transmembrane 99.2 2.9E-09 6.3E-14 113.9 21.1 161 401-572 49-219 (476)
159 PF06963 FPN1: Ferroportin1 (F 99.1 3E-08 6.6E-13 102.4 27.0 323 213-540 45-411 (432)
160 PRK15011 sugar efflux transpor 99.1 4.6E-09 9.9E-14 109.6 21.1 177 387-573 14-195 (393)
161 TIGR00891 2A0112 putative sial 99.1 3.7E-09 8.1E-14 110.3 20.4 170 389-568 13-185 (405)
162 TIGR00890 2A0111 Oxalate/Forma 99.1 1.5E-09 3.3E-14 111.9 17.2 159 403-571 18-176 (377)
163 PRK11551 putative 3-hydroxyphe 99.1 4.9E-09 1.1E-13 109.8 21.3 170 392-570 19-188 (406)
164 PRK03699 putative transporter; 99.1 6.5E-09 1.4E-13 108.5 21.7 173 388-570 7-181 (394)
165 TIGR00895 2A0115 benzoate tran 99.1 2.4E-09 5.1E-14 111.5 17.4 164 397-570 26-190 (398)
166 PRK11195 lysophospholipid tran 99.1 5E-09 1.1E-13 109.2 19.7 172 387-571 2-173 (393)
167 TIGR00712 glpT glycerol-3-phos 99.1 3.7E-09 8E-14 112.0 18.6 178 387-571 26-205 (438)
168 PRK15034 nitrate/nitrite trans 99.1 5.8E-09 1.3E-13 108.9 19.4 179 387-573 33-233 (462)
169 TIGR00893 2A0114 d-galactonate 99.1 2.3E-09 5.1E-14 111.1 16.5 159 404-571 10-168 (399)
170 PRK15402 multidrug efflux syst 99.1 8.7E-09 1.9E-13 108.0 20.5 158 404-571 29-187 (406)
171 PF05977 MFS_3: Transmembrane 99.1 5.6E-09 1.2E-13 111.6 19.2 185 384-573 6-191 (524)
172 PRK11652 emrD multidrug resist 99.1 9.1E-09 2E-13 107.4 20.5 169 393-571 13-182 (394)
173 PF02487 CLN3: CLN3 protein; 99.1 5.2E-08 1.1E-12 98.9 24.9 320 209-544 62-394 (402)
174 cd06174 MFS The Major Facilita 99.1 6.3E-09 1.4E-13 106.0 18.8 169 392-570 3-172 (352)
175 PRK03633 putative MFS family t 99.1 8.1E-09 1.8E-13 107.2 19.8 152 387-548 5-157 (381)
176 PRK11102 bicyclomycin/multidru 99.1 4.5E-09 9.8E-14 108.8 17.8 159 404-571 7-165 (377)
177 PRK09705 cynX putative cyanate 99.1 8.6E-09 1.9E-13 107.5 19.9 156 405-570 26-182 (393)
178 PRK11273 glpT sn-glycerol-3-ph 99.1 1.4E-08 2.9E-13 108.1 21.4 157 408-571 49-207 (452)
179 PRK15403 multidrug efflux syst 99.0 1.5E-08 3.2E-13 106.4 20.5 153 407-570 35-189 (413)
180 PRK12307 putative sialic acid 99.0 1.5E-08 3.2E-13 107.0 20.5 162 390-561 20-182 (426)
181 TIGR00902 2A0127 phenyl propri 99.0 1.1E-08 2.4E-13 106.2 18.8 164 391-564 7-171 (382)
182 PRK03893 putative sialic acid 99.0 1.6E-08 3.4E-13 109.0 20.4 165 389-562 21-185 (496)
183 TIGR00892 2A0113 monocarboxyla 99.0 8.9E-09 1.9E-13 109.5 17.8 155 407-572 38-194 (455)
184 PRK10642 proline/glycine betai 99.0 1.1E-08 2.4E-13 109.9 18.7 138 216-354 296-435 (490)
185 TIGR00885 fucP L-fucose:H+ sym 99.0 3.2E-08 6.9E-13 103.7 21.4 173 390-569 5-204 (410)
186 COG2223 NarK Nitrate/nitrite t 99.0 1.3E-08 2.7E-13 102.0 17.0 178 388-573 14-194 (417)
187 PRK11128 putative 3-phenylprop 99.0 1.5E-08 3.1E-13 105.4 18.3 163 396-567 12-174 (382)
188 TIGR00881 2A0104 phosphoglycer 99.0 3.4E-09 7.3E-14 109.4 13.1 164 398-571 5-170 (379)
189 PRK09556 uhpT sugar phosphate 99.0 9.2E-09 2E-13 109.9 16.6 161 406-571 47-211 (467)
190 PRK06814 acylglycerophosphoeth 99.0 1.7E-08 3.8E-13 119.9 20.1 183 384-571 7-194 (1140)
191 KOG3098 Uncharacterized conser 99.0 3.8E-07 8.2E-12 94.3 26.8 317 212-544 56-411 (461)
192 TIGR00879 SP MFS transporter, 99.0 6.4E-09 1.4E-13 110.9 13.8 141 212-352 325-474 (481)
193 TIGR00806 rfc RFC reduced fola 98.9 6.6E-08 1.4E-12 99.6 19.4 158 408-576 45-207 (511)
194 PRK11902 ampG muropeptide tran 98.9 9.6E-08 2.1E-12 100.0 20.5 169 394-571 5-181 (402)
195 PRK11010 ampG muropeptide tran 98.9 1.3E-07 2.8E-12 101.5 21.8 179 385-571 9-194 (491)
196 PRK10077 xylE D-xylose transpo 98.9 2.2E-08 4.8E-13 107.3 16.0 137 217-353 317-462 (479)
197 TIGR00769 AAA ADP/ATP carrier 98.9 2E-05 4.2E-10 82.8 36.8 228 223-455 61-334 (472)
198 TIGR00880 2_A_01_02 Multidrug 98.9 3E-08 6.6E-13 86.3 12.3 136 430-573 4-139 (141)
199 PRK10133 L-fucose transporter; 98.9 2.4E-07 5.2E-12 97.9 21.3 150 389-545 27-177 (438)
200 TIGR00894 2A0114euk Na(+)-depe 98.9 2.8E-08 6.1E-13 106.1 14.1 149 418-572 70-219 (465)
201 TIGR00896 CynX cyanate transpo 98.8 5.6E-08 1.2E-12 99.9 15.4 149 406-565 18-168 (355)
202 PRK08633 2-acyl-glycerophospho 98.8 1.1E-07 2.3E-12 113.3 20.0 159 384-547 5-165 (1146)
203 PF01306 LacY_symp: LacY proto 98.8 4.7E-08 1E-12 99.9 13.9 181 385-572 4-188 (412)
204 TIGR01301 GPH_sucrose GPH fami 98.8 2E-07 4.4E-12 98.1 19.0 179 390-575 6-221 (477)
205 TIGR00901 2A0125 AmpG-related 98.8 1.3E-07 2.9E-12 97.1 17.3 157 406-571 6-177 (356)
206 TIGR00898 2A0119 cation transp 98.8 5.1E-08 1.1E-12 105.3 14.6 127 222-351 371-497 (505)
207 PF11700 ATG22: Vacuole efflux 98.8 9.4E-08 2E-12 101.2 15.9 129 217-347 328-467 (477)
208 KOG0637 Sucrose transporter an 98.8 3E-07 6.6E-12 92.7 17.4 319 224-549 85-472 (498)
209 TIGR02718 sider_RhtX_FptX side 98.8 4E-07 8.6E-12 94.9 19.4 179 390-573 3-185 (390)
210 KOG1330 Sugar transporter/spin 98.8 6.6E-09 1.4E-13 104.8 5.5 176 389-574 34-211 (493)
211 KOG3574 Acetyl-CoA transporter 98.8 2E-06 4.3E-11 84.6 22.1 313 224-550 81-434 (510)
212 TIGR00883 2A0106 metabolite-pr 98.8 4.5E-08 9.8E-13 101.6 11.9 125 214-338 263-391 (394)
213 KOG3764 Vesicular amine transp 98.8 2.5E-08 5.4E-13 98.6 9.0 147 419-574 101-249 (464)
214 PTZ00207 hypothetical protein; 98.8 7.5E-07 1.6E-11 95.9 20.8 163 403-572 42-205 (591)
215 TIGR00792 gph sugar (Glycoside 98.8 1.7E-07 3.6E-12 99.3 15.7 117 210-327 261-384 (437)
216 TIGR00805 oat sodium-independe 98.7 2.2E-07 4.7E-12 102.4 16.0 160 410-572 55-281 (633)
217 TIGR00926 2A1704 Peptide:H+ sy 98.7 5.1E-06 1.1E-10 91.1 26.4 135 213-347 30-181 (654)
218 TIGR00887 2A0109 phosphate:H+ 98.7 1.2E-06 2.6E-11 94.6 21.2 168 395-568 23-221 (502)
219 PRK10406 alpha-ketoglutarate t 98.7 1.5E-06 3.2E-11 91.9 21.3 163 396-565 30-212 (432)
220 KOG0253 Synaptic vesicle trans 98.7 5.6E-08 1.2E-12 95.0 9.0 122 224-351 399-522 (528)
221 PRK09952 shikimate transporter 98.7 2.4E-06 5.2E-11 90.5 22.2 165 390-564 24-212 (438)
222 COG3104 PTR2 Dipeptide/tripept 98.6 4.2E-07 9.1E-12 93.3 14.1 184 384-574 16-208 (498)
223 PF06609 TRI12: Fungal trichot 98.6 2.6E-06 5.7E-11 91.3 20.2 176 385-571 37-216 (599)
224 PRK15075 citrate-proton sympor 98.6 2.8E-06 6E-11 89.9 20.5 160 390-559 17-199 (434)
225 KOG3810 Micronutrient transpor 98.6 9.3E-07 2E-11 85.8 13.9 333 228-574 64-423 (433)
226 KOG2532 Permease of the major 98.6 7.3E-07 1.6E-11 93.9 14.5 150 418-574 67-218 (466)
227 COG2270 Permeases of the major 98.6 4.8E-07 1E-11 90.9 11.8 132 211-344 293-425 (438)
228 PRK09848 glucuronide transport 98.6 1.7E-06 3.7E-11 91.9 16.5 111 216-326 274-391 (448)
229 KOG2615 Permease of the major 98.5 5.9E-07 1.3E-11 88.6 10.8 116 422-546 66-181 (451)
230 COG0477 ProP Permeases of the 98.5 3.6E-05 7.8E-10 76.1 23.3 134 206-339 39-176 (338)
231 KOG4332 Predicted sugar transp 98.5 5.9E-06 1.3E-10 77.5 15.7 327 215-567 81-426 (454)
232 PF03825 Nuc_H_symport: Nucleo 98.5 4E-06 8.7E-11 87.0 15.7 125 224-349 261-396 (400)
233 PRK09669 putative symporter Ya 98.4 3.4E-06 7.3E-11 89.6 15.1 172 393-570 14-202 (444)
234 COG0738 FucP Fucose permease [ 98.4 1.6E-05 3.5E-10 79.5 18.5 161 405-572 29-210 (422)
235 KOG2504 Monocarboxylate transp 98.4 1.5E-06 3.2E-11 92.7 11.0 132 215-348 342-476 (509)
236 PRK10429 melibiose:sodium symp 98.4 7.9E-06 1.7E-10 87.4 16.7 173 392-570 10-199 (473)
237 KOG0569 Permease of the major 98.4 8.3E-06 1.8E-10 85.3 16.1 143 214-357 313-463 (485)
238 PRK11462 putative transporter; 98.4 1.4E-05 3E-10 85.1 18.4 174 392-570 13-202 (460)
239 TIGR01272 gluP glucose/galacto 98.4 6.5E-06 1.4E-10 82.7 13.9 123 209-336 181-303 (310)
240 PF06813 Nodulin-like: Nodulin 98.3 7.3E-05 1.6E-09 71.7 20.1 142 207-351 38-184 (250)
241 KOG3762 Predicted transporter 98.3 7.8E-06 1.7E-10 84.3 14.1 180 383-572 366-547 (618)
242 KOG3762 Predicted transporter 98.3 1.5E-06 3.2E-11 89.5 8.0 122 224-347 424-546 (618)
243 TIGR00788 fbt folate/biopterin 98.3 2.2E-05 4.8E-10 83.7 16.8 174 390-573 28-210 (468)
244 KOG4686 Predicted sugar transp 98.2 2.2E-05 4.9E-10 74.3 13.3 98 224-325 318-416 (459)
245 COG2807 CynX Cyanate permease 98.2 0.0001 2.2E-09 72.8 18.2 155 406-571 30-185 (395)
246 KOG2533 Permease of the major 98.2 1.5E-05 3.1E-10 84.4 13.1 149 417-574 74-229 (495)
247 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0055 1.2E-07 64.9 31.5 229 224-456 77-351 (491)
248 PF06813 Nodulin-like: Nodulin 98.2 5.6E-05 1.2E-09 72.5 14.8 161 403-572 17-182 (250)
249 PF13347 MFS_2: MFS/sugar tran 98.2 1.4E-05 3.1E-10 84.3 11.9 171 398-574 11-200 (428)
250 KOG0255 Synaptic vesicle trans 98.2 2.8E-05 6.1E-10 84.4 14.3 141 419-571 113-254 (521)
251 PF13000 Acatn: Acetyl-coenzym 98.1 0.0013 2.7E-08 68.0 24.3 278 265-547 122-467 (544)
252 PF05631 DUF791: Protein of un 98.1 0.001 2.2E-08 66.3 21.9 147 418-574 63-218 (354)
253 COG2211 MelB Na+/melibiose sym 98.0 0.0002 4.3E-09 74.4 16.6 177 391-573 15-208 (467)
254 PF05978 UNC-93: Ion channel r 98.0 9.1E-05 2E-09 65.6 11.6 106 213-321 44-149 (156)
255 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00017 3.8E-09 79.2 15.4 169 403-573 2-183 (654)
256 PF00854 PTR2: POT family; In 97.9 0.0001 2.2E-09 76.2 11.8 111 237-347 2-122 (372)
257 KOG0254 Predicted transporter 97.8 0.00028 6.1E-09 76.3 14.9 134 425-568 90-226 (513)
258 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00011 2.3E-09 56.7 8.2 65 392-457 4-68 (77)
259 KOG1237 H+/oligopeptide sympor 97.7 0.0058 1.3E-07 66.1 22.4 123 224-346 91-243 (571)
260 KOG2816 Predicted transporter 97.7 0.00093 2E-08 70.3 15.9 130 434-574 72-201 (463)
261 TIGR00939 2a57 Equilibrative N 97.7 0.016 3.5E-07 60.9 24.0 98 214-316 53-156 (437)
262 PF03209 PUCC: PUCC protein; 97.6 0.0022 4.7E-08 65.1 16.0 150 415-566 6-170 (403)
263 PF00083 Sugar_tr: Sugar (and 97.6 1.8E-06 3.9E-11 91.8 -6.5 135 221-355 301-443 (451)
264 PF07672 MFS_Mycoplasma: Mycop 97.4 0.0029 6.2E-08 60.1 12.9 101 293-401 2-107 (267)
265 PRK03612 spermidine synthase; 97.4 0.012 2.7E-07 63.2 19.7 166 394-566 20-191 (521)
266 KOG0252 Inorganic phosphate tr 97.4 0.00016 3.5E-09 73.5 4.7 129 224-353 366-502 (538)
267 COG3202 ATP/ADP translocase [E 97.4 0.25 5.5E-06 51.4 35.1 228 224-454 80-352 (509)
268 PF03092 BT1: BT1 family; Int 97.3 0.004 8.8E-08 65.6 14.7 158 409-573 10-176 (433)
269 KOG3880 Predicted small molecu 97.3 0.0022 4.7E-08 61.8 10.5 311 216-541 72-398 (409)
270 PF06963 FPN1: Ferroportin1 (F 97.1 0.096 2.1E-06 54.7 21.6 182 389-570 3-198 (432)
271 KOG2325 Predicted transporter/ 97.0 0.011 2.4E-07 61.8 13.1 178 390-572 36-229 (488)
272 KOG2563 Permease of the major 96.9 0.01 2.2E-07 60.7 11.9 131 412-548 68-203 (480)
273 PF05978 UNC-93: Ion channel r 96.8 0.092 2E-06 46.5 15.7 110 428-546 41-150 (156)
274 PF01770 Folate_carrier: Reduc 96.6 0.12 2.7E-06 53.1 16.9 161 407-576 22-186 (412)
275 TIGR00769 AAA ADP/ATP carrier 96.6 0.2 4.3E-06 53.0 19.1 152 388-546 7-190 (472)
276 KOG1479 Nucleoside transporter 96.5 0.2 4.3E-06 51.2 17.9 29 261-289 117-145 (406)
277 COG0477 ProP Permeases of the 96.2 0.45 9.6E-06 46.4 18.5 151 402-561 16-174 (338)
278 KOG3097 Predicted membrane pro 96.2 0.46 9.9E-06 46.8 17.0 64 224-290 76-139 (390)
279 PF06779 DUF1228: Protein of u 95.3 0.17 3.7E-06 39.5 8.6 55 401-456 5-59 (85)
280 PF02487 CLN3: CLN3 protein; 95.3 0.38 8.2E-06 49.5 13.7 64 255-320 331-394 (402)
281 PF03137 OATP: Organic Anion T 95.2 0.0044 9.6E-08 66.9 -0.5 171 402-574 16-252 (539)
282 KOG3626 Organic anion transpor 94.9 0.35 7.5E-06 53.3 12.7 167 406-575 114-346 (735)
283 KOG0637 Sucrose transporter an 94.2 0.085 1.8E-06 54.3 5.6 154 388-543 32-201 (498)
284 PRK03612 spermidine synthase; 94.1 0.88 1.9E-05 49.1 13.8 77 265-342 114-191 (521)
285 KOG1237 H+/oligopeptide sympor 94.0 1.8 3.9E-05 47.2 15.8 177 393-571 42-244 (571)
286 PF12832 MFS_1_like: MFS_1 lik 93.8 0.15 3.3E-06 39.2 5.3 44 203-246 32-75 (77)
287 KOG3098 Uncharacterized conser 93.8 1.1 2.4E-05 47.0 13.3 103 217-320 290-411 (461)
288 KOG1479 Nucleoside transporter 93.6 2.9 6.2E-05 43.0 15.3 179 387-570 17-202 (406)
289 TIGR00939 2a57 Equilibrative N 93.1 1.9 4.1E-05 45.5 13.8 61 260-320 371-431 (437)
290 PF01733 Nucleoside_tran: Nucl 93.0 0.029 6.2E-07 56.3 0.2 113 428-541 186-304 (309)
291 PF00854 PTR2: POT family; In 93.0 0.57 1.2E-05 48.3 9.8 58 516-573 67-124 (372)
292 KOG4332 Predicted sugar transp 91.1 1.1 2.4E-05 43.0 8.1 147 414-570 62-218 (454)
293 PF06779 DUF1228: Protein of u 90.4 1.2 2.7E-05 34.7 6.6 57 205-263 26-82 (85)
294 KOG2601 Iron transporter [Inor 90.4 7.1 0.00015 39.5 13.2 172 389-563 28-217 (503)
295 COG4262 Predicted spermidine s 89.0 23 0.0005 35.6 15.4 37 414-450 33-69 (508)
296 PF06912 DUF1275: Protein of u 87.7 18 0.00039 33.8 13.9 44 292-336 157-200 (209)
297 KOG3574 Acetyl-CoA transporter 82.9 19 0.0004 36.8 11.6 67 388-458 31-102 (510)
298 PRK10263 DNA translocase FtsK; 81.8 13 0.00028 43.9 11.4 37 531-567 141-177 (1355)
299 PF07857 DUF1632: CEO family ( 81.6 37 0.0008 32.7 12.9 25 394-418 184-208 (254)
300 KOG2601 Iron transporter [Inor 81.0 14 0.00031 37.4 10.0 118 222-339 79-217 (503)
301 KOG4830 Predicted sugar transp 78.0 1.4 2.9E-05 42.0 1.9 66 379-444 192-257 (412)
302 KOG3880 Predicted small molecu 74.1 14 0.0003 36.6 7.5 72 247-320 330-401 (409)
303 PF03741 TerC: Integral membra 74.0 71 0.0015 29.1 17.7 59 276-336 11-69 (183)
304 PF01733 Nucleoside_tran: Nucl 72.1 1.5 3.2E-05 44.0 0.6 111 209-319 185-306 (309)
305 COG3202 ATP/ADP translocase [E 71.2 1.5E+02 0.0032 31.6 28.9 53 517-569 317-370 (509)
306 PF03219 TLC: TLC ATP/ADP tran 70.7 1.6E+02 0.0034 31.7 30.5 52 516-567 314-365 (491)
307 PF02990 EMP70: Endomembrane p 69.7 88 0.0019 33.9 13.5 28 430-457 303-330 (521)
308 KOG3810 Micronutrient transpor 68.8 27 0.00058 35.3 8.3 129 212-345 277-418 (433)
309 TIGR00844 c_cpa1 na(+)/h(+) an 67.9 2.2E+02 0.0048 32.4 29.4 38 300-337 104-141 (810)
310 PRK00293 dipZ thiol:disulfide 67.4 2E+02 0.0043 31.6 25.9 30 422-451 323-352 (571)
311 PF13000 Acatn: Acetyl-coenzym 67.1 26 0.00056 37.2 8.3 68 392-459 4-75 (544)
312 PF05255 UPF0220: Uncharacteri 66.5 39 0.00085 30.2 8.3 58 289-346 14-77 (166)
313 PF02535 Zip: ZIP Zinc transpo 64.3 1.6E+02 0.0034 29.3 13.8 13 265-277 264-276 (317)
314 COG5336 Uncharacterized protei 63.1 32 0.0007 27.9 6.2 32 516-547 37-68 (116)
315 PF11947 DUF3464: Protein of u 60.3 39 0.00084 29.7 6.9 27 510-536 119-145 (153)
316 COG1457 CodB Purine-cytosine p 53.8 2.9E+02 0.0063 29.1 23.4 147 287-454 11-158 (442)
317 PF11947 DUF3464: Protein of u 52.9 52 0.0011 28.9 6.5 51 260-313 96-146 (153)
318 COG5336 Uncharacterized protei 52.3 52 0.0011 26.7 5.8 36 210-245 46-82 (116)
319 PF12805 FUSC-like: FUSC-like 45.1 1.2E+02 0.0026 29.8 8.7 36 240-276 3-38 (284)
320 KOG3097 Predicted membrane pro 44.9 3.1E+02 0.0068 27.7 11.0 61 388-455 29-89 (390)
321 PF06123 CreD: Inner membrane 44.4 3.1E+02 0.0067 28.8 11.7 57 238-300 328-384 (430)
322 PF07760 DUF1616: Protein of u 42.7 2.7E+02 0.0059 27.4 10.8 56 264-320 22-77 (287)
323 PRK15015 carbon starvation pro 40.2 5.6E+02 0.012 28.5 18.7 35 288-327 79-114 (701)
324 KOG2881 Predicted membrane pro 37.2 3.9E+02 0.0085 25.8 14.9 16 444-459 260-275 (294)
325 PF13491 DUF4117: Domain of un 37.1 2.2E+02 0.0049 25.2 8.6 39 530-568 120-158 (171)
326 PF04226 Transgly_assoc: Trans 36.9 1.3E+02 0.0029 20.5 5.2 38 309-346 7-44 (48)
327 PF02447 GntP_permease: GntP f 36.8 5.3E+02 0.012 27.2 15.4 78 260-342 24-110 (441)
328 TIGR02230 ATPase_gene1 F0F1-AT 35.5 1.6E+02 0.0035 23.8 6.3 43 205-247 41-84 (100)
329 COG2962 RarD Predicted permeas 35.3 4.4E+02 0.0096 25.9 11.7 66 381-455 62-128 (293)
330 PTZ00370 STEVOR; Provisional 34.7 50 0.0011 32.0 3.8 29 548-576 255-283 (296)
331 PF11299 DUF3100: Protein of u 34.6 1.2E+02 0.0026 28.6 6.2 93 224-317 125-226 (241)
332 PF11833 DUF3353: Protein of u 34.1 2.9E+02 0.0063 25.4 8.7 31 292-322 136-166 (194)
333 PRK13108 prolipoprotein diacyl 34.0 3.6E+02 0.0077 28.6 10.4 25 417-441 46-70 (460)
334 PF07672 MFS_Mycoplasma: Mycop 33.3 4.6E+02 0.01 25.5 10.6 91 218-312 153-254 (267)
335 PRK10263 DNA translocase FtsK; 33.2 3.2E+02 0.007 33.0 10.6 25 308-332 142-166 (1355)
336 TIGR01666 YCCS hypothetical me 33.1 3.6E+02 0.0078 30.5 10.8 52 224-276 41-96 (704)
337 PRK10692 hypothetical protein; 32.9 1.2E+02 0.0027 23.5 4.9 18 235-252 3-20 (92)
338 PF11368 DUF3169: Protein of u 32.4 4.5E+02 0.0099 25.1 12.0 25 296-320 9-33 (248)
339 KOG1307 K+-dependent Ca2+/Na+ 32.2 6.3E+02 0.014 26.7 11.5 9 226-234 443-451 (588)
340 PF03706 UPF0104: Uncharacteri 31.8 4.8E+02 0.01 25.2 16.9 49 208-256 29-77 (294)
341 PRK13629 threonine/serine tran 31.7 6.4E+02 0.014 26.6 18.7 41 292-337 19-59 (443)
342 COG5373 Predicted membrane pro 31.5 8.3E+02 0.018 27.9 14.5 39 307-345 206-245 (931)
343 PF03596 Cad: Cadmium resistan 31.5 1.9E+02 0.0041 26.6 6.9 30 313-342 42-71 (191)
344 TIGR01667 YCCS_YHJK integral m 30.2 5E+02 0.011 29.4 11.4 52 224-276 41-96 (701)
345 TIGR02230 ATPase_gene1 F0F1-AT 30.0 2.6E+02 0.0056 22.6 6.6 25 301-325 47-71 (100)
346 PF05297 Herpes_LMP1: Herpesvi 28.3 19 0.00042 34.5 0.0 13 559-571 173-185 (381)
347 PRK14218 camphor resistance pr 27.4 4E+02 0.0086 22.8 10.6 49 206-255 7-56 (133)
348 COG1480 Predicted membrane-ass 27.4 9E+02 0.019 27.0 14.4 12 323-334 271-282 (700)
349 PF12273 RCR: Chitin synthesis 27.4 32 0.0007 29.3 1.2 18 327-344 1-18 (130)
350 PF10762 DUF2583: Protein of u 27.2 1.4E+02 0.0031 23.0 4.4 42 235-276 3-53 (89)
351 PF02554 CstA: Carbon starvati 26.0 7.3E+02 0.016 25.5 18.9 40 288-332 48-89 (376)
352 COG3619 Predicted membrane pro 25.0 6E+02 0.013 24.1 16.4 40 286-325 156-196 (226)
353 PTZ00265 multidrug resistance 24.9 1.4E+03 0.031 28.5 18.9 19 324-342 195-213 (1466)
354 COG2233 UraA Xanthine/uracil p 24.6 8.5E+02 0.019 25.8 12.3 62 393-454 18-79 (451)
355 cd02434 Nodulin-21_like_3 Nodu 24.4 6E+02 0.013 24.0 11.5 26 437-462 180-205 (225)
356 PF05297 Herpes_LMP1: Herpesvi 24.4 25 0.00055 33.7 0.0 34 425-458 106-139 (381)
357 COG0861 TerC Membrane protein 23.8 6.7E+02 0.014 24.2 23.5 65 268-334 23-87 (254)
358 PF00909 Ammonium_transp: Ammo 23.5 8.4E+02 0.018 25.3 14.2 30 293-322 107-136 (399)
359 TIGR00844 c_cpa1 na(+)/h(+) an 23.4 1.2E+03 0.025 26.9 12.7 19 406-424 23-41 (810)
360 COG1230 CzcD Co/Zn/Cd efflux s 23.3 7.4E+02 0.016 24.6 13.2 40 295-334 153-192 (296)
361 PRK11715 inner membrane protei 23.3 7.8E+02 0.017 25.9 10.6 19 239-257 335-353 (436)
362 PF13937 DUF4212: Domain of un 21.5 3.8E+02 0.0083 20.7 5.9 45 299-343 15-61 (81)
363 PF06123 CreD: Inner membrane 21.4 9.7E+02 0.021 25.2 11.3 75 264-347 324-398 (430)
364 COG4262 Predicted spermidine s 21.3 9E+02 0.02 24.8 13.6 85 261-347 105-190 (508)
365 TIGR01478 STEVOR variant surfa 21.0 1.4E+02 0.0031 28.9 4.2 29 548-576 259-287 (295)
366 PRK02237 hypothetical protein; 20.7 1.7E+02 0.0037 23.9 4.0 37 424-460 56-92 (109)
367 COG2274 SunT ABC-type bacterio 20.7 1.3E+03 0.027 26.3 14.6 168 408-579 142-322 (709)
368 PTZ00370 STEVOR; Provisional 20.5 2.7E+02 0.0058 27.2 5.9 37 313-349 244-280 (296)
369 PRK14199 camphor resistance pr 20.3 5.4E+02 0.012 21.8 9.6 46 209-255 7-53 (128)
No 1
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=294.22 Aligned_cols=367 Identities=39% Similarity=0.720 Sum_probs=322.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
..++.+..+.+..+++++.|+++||+|.|+++..+.++.++++++.+++...+++.+++.|+++|++.|..+|+...+.+
T Consensus 75 k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~ 154 (466)
T KOG2532|consen 75 KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILA 154 (466)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceee
Confidence 36777888899999999999999999999999999999999999999998777788899999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~-~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
+|.|++||++..++...+..+|.+++-+++|++.+. +||+++|++.++++++..++++.+..|+|.+.+...++|.+.+
T Consensus 155 ~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I 234 (466)
T KOG2532|consen 155 KWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYI 234 (466)
T ss_pred eECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999988877777777766
Q ss_pred hcCCcccccc--cchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAV--SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 367 ~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
..+..+.... ...|++++++++.+|.+.+..++..++.+.+..|+|.|+++++|++..+.|++.++..+...+..++.
T Consensus 235 ~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~ 314 (466)
T KOG2532|consen 235 EKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVA 314 (466)
T ss_pred HhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHH
Confidence 6554443333 47899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHH
Q 008070 445 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR--TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 522 (579)
Q Consensus 445 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 522 (579)
|.++||+.+|.+.....+.+.-.++..+.++.+......+ ..+..++++.+..+..+...........+..|++.+..
T Consensus 315 g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l 394 (466)
T KOG2532|consen 315 GQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFV 394 (466)
T ss_pred HHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHH
Confidence 9999999876555555667777888887777776665544 33455666666666666777777776666689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQR---GSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~---~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
+|+.+.+..++++++|.+.|.+... ..|+.+|++.+++.+++.+++.++.+.
T Consensus 395 ~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~ 449 (466)
T KOG2532|consen 395 MGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSG 449 (466)
T ss_pred HHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecC
Confidence 9999999999999999999999943 479999999999999999888777543
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=275.55 Aligned_cols=341 Identities=21% Similarity=0.252 Sum_probs=278.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
.+.+.+...++..++.|+...+.||+.||++++..+.++.++.+++++++ ||+.+++.|++.|+..|.+++...++..
T Consensus 50 aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~ 127 (394)
T COG2814 50 AGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAA 127 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677777888889999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhc-CCCCCChhhcHHHHhhh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY-SSPKEDPELRAEEKRHI 366 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~-~~~~~~~~~~~~~~~~~ 366 (579)
++.|+++|++++++...+..++.++|.+++.++.+.+|||++|++.+.++++.++..+...| ...++.+....
T Consensus 128 ~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~------ 201 (394)
T COG2814 128 RLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPL------ 201 (394)
T ss_pred HHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcch------
Confidence 99999999999999999999999999999999999999999999999999999988888888 21111111111
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGW 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~ 446 (579)
.....++++|.++...+..++...+.+..++|+..++++..|++....++++..+++++++|++++|+
T Consensus 202 ------------~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGr 269 (394)
T COG2814 202 ------------RTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGR 269 (394)
T ss_pred ------------hHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 11234789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHH
Q 008070 447 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLS 526 (579)
Q Consensus 447 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 526 (579)
+.|| +.++.+.. ...+.......+.. .....+.......+.++..............+..|+.++.+.+++
T Consensus 270 l~dr-~~~~~l~~-------~~~l~a~~~l~l~~-~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~ 340 (394)
T COG2814 270 LADR-GPRRALIA-------ALLLLALALLALTF-TGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLN 340 (394)
T ss_pred hccc-cchhHHHH-------HHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHH
Confidence 9999 66643221 11222222222222 223334444444433333333344444434446679999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 008070 527 NTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERV 577 (579)
Q Consensus 527 ~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 577 (579)
....++|..+|..++|.++|++|+....++.+++.+++.++.+...+.+|+
T Consensus 341 ~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 341 VAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999998888777665443
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=274.97 Aligned_cols=360 Identities=17% Similarity=0.226 Sum_probs=282.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
-++++.++.++.+.++..+.|.++||.+.|..+.+++++.++..+++++++ +.+.+.++.++.|+.+|..+|++...+
T Consensus 65 ~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i 142 (448)
T COG2271 65 QLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTI 142 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 344555555566666669999999999999999999999999999999999 899999999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHH--HHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVS--PILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~--~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
++|++++|||+..++++...++|..+.|++. +++..+.+||..|++.++++++..++.++..+++|++..-.+.++..
T Consensus 143 ~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~ 222 (448)
T COG2271 143 THWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYR 222 (448)
T ss_pred HHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhh
Confidence 9999999999999999999999999999999 89988899999999999999999999999999998764433222221
Q ss_pred hhhcC--Ccccc----cccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHH
Q 008070 365 HILGG--SISKE----AVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMA 438 (579)
Q Consensus 365 ~~~~~--~~~~~----~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ 438 (579)
....+ .++++ .....-++.+++||.+|.+++..++.+..-+++..|.|.|+.|..|++...+++..+.+-.+++
T Consensus 223 ~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl 302 (448)
T COG2271 223 GDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGL 302 (448)
T ss_pred cCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhh
Confidence 11100 11111 1122456778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhh--ccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccC
Q 008070 439 VFANMGGWIADTLV--SKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIG 515 (579)
Q Consensus 439 ig~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (579)
+|.++.|+++||+- ||...- ++..+++. ..+.........+.++. +.++.+++...+.....-....+..|
T Consensus 303 ~G~Ll~GwlSDklfkgrR~p~~-----~i~~~~i~-~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~p 376 (448)
T COG2271 303 PGTLLAGWLSDKLFKGRRGPMA-----LIFMLLIT-ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVP 376 (448)
T ss_pred HHHHHHHHHHHHhcccccchHH-----HHHHHHHH-HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 99999999999974 443221 11122222 22222222222333333 33333444433333333334555567
Q ss_pred CCchhHHHHHHHHHHHH-HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 516 PRYAGVLLGLSNTAGVL-AGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~l-g~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
++..|++.|+...+.++ |.+.+....|++.|..||...|++..+.++++.++++.+.+.
T Consensus 377 K~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 377 KKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred HhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 78899999999999999 999999999999999999999999988888888777766543
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=6e-32 Score=285.44 Aligned_cols=366 Identities=16% Similarity=0.144 Sum_probs=263.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.+...+...+++++.|++.||+|||+++.++.++.+++.+++++++ +++.+++.|++.|++.|...+...++
T Consensus 58 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~ 135 (434)
T PRK11663 58 SDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKL 135 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHH
Confidence 3456666777778888889999999999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcH---HH
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA---EE 362 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~---~~ 362 (579)
+.+++|+++|+++++++..+.++|.++++++++++.+.+|||+.|++.+++.++..++..+..+++|+....... ++
T Consensus 136 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 215 (434)
T PRK11663 136 LTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH 215 (434)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc
Confidence 999999999999999999999999999999999999999999999998887766655555555555432110000 00
Q ss_pred HhhhhcCCcccccccchh-H-HHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHH
Q 008070 363 KRHILGGSISKEAVSVIP-W-KLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVF 440 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig 440 (579)
...........+...... + ...++++.+|.+.+..++.......+..|+|.|+.+.+|++..+++...+...++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g 295 (434)
T PRK11663 216 DALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIG 295 (434)
T ss_pred cccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 000000000000001111 1 22567888998888888777778888889999998778999999999999999999999
Q ss_pred HHHHHHHhhhhh--ccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 441 ANMGGWIADTLV--SKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 441 ~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
+++.|++.||+. +|+... ....++.......+......+........+.++.+.............+..+++.
T Consensus 296 ~~~~g~l~dr~~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (434)
T PRK11663 296 ALVAGWGSDKLFNGNRGPMN-----LIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA 370 (434)
T ss_pred HHHHhhhHHHhccCCccHHH-----HHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh
Confidence 999999999983 233221 1111111111111111112222222222222222211111111222344456789
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCcccC
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVL 578 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 578 (579)
+|++.|+.++..++|.+++|.+.|++.|+.||..+|.+.+++.+++.+..+...++++..
T Consensus 371 ~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 371 AGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 999999999999999999999999999999999999999999888877776666555443
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.2e-31 Score=277.47 Aligned_cols=339 Identities=15% Similarity=0.120 Sum_probs=260.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.+...+...+.+++.|++.||+|||+++..+.++.+++.+++++++ +++.+++.|+++|++.+...+...++
T Consensus 44 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~ 121 (390)
T PRK03545 44 AQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASL 121 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666777777788889999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.+++|+++|+++++++..+.++|.+++|++++.+.+.+|||+.|++.+++.++..++.+...|+.+++++.
T Consensus 122 i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~-------- 193 (390)
T PRK03545 122 AIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG-------- 193 (390)
T ss_pred HHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc--------
Confidence 999999999999999999999999999999999999999999999999988877666655555543322110
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
.....++++++|.++...+..++.....+....+++.|+.+.+|++..+.+.+.....++.++++++.+
T Consensus 194 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 262 (390)
T PRK03545 194 -----------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFS 262 (390)
T ss_pred -----------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 011245678888888776666666666666777888888887899999999999999999999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 525 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 525 (579)
++.||+++|.... ...+.............+.+...+.....+.+. ....+.......+..|+.+++++|+
T Consensus 263 ~l~dr~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~ 333 (390)
T PRK03545 263 RLGNRHPSGFLLI--------AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAPDATDVAMAL 333 (390)
T ss_pred HHhhccchhHHHH--------HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-hcchHHHHHHHHHhCCCcHHHHHHH
Confidence 9999998764211 111111111111111122222222222333332 2222223333334567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 526 SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
++....+|..+||.+.|.+.|+.|++..|.+.+++.+++.++.....++
T Consensus 334 ~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 334 FSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999998888777666553
No 6
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.1e-31 Score=277.05 Aligned_cols=362 Identities=26% Similarity=0.392 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.....+...++.++.|+++||+|||+++.++.++.+++.+++++++ +++.+++.|++.|++.+...+....+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~ 106 (399)
T TIGR00893 29 AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--AYVSLYILRVLLGAAEAPFFPGIILI 106 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 3456777788888889999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.|++|+++|++++++......+|.++++.+++.+.+..+||+.|++.+++.++..++.++..++++++.+...++++..
T Consensus 107 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (399)
T TIGR00893 107 VASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI 186 (399)
T ss_pred HHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhh
Confidence 99999999999999999999999999999999999999999999999888887777666666666554332222211111
Q ss_pred hhcC------CcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHH
Q 008070 366 ILGG------SISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAV 439 (579)
Q Consensus 366 ~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~i 439 (579)
..+. ..++++......++.+++|.++...+..++.......+..+.|.|+.+.+|.++.+.+++.....++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (399)
T TIGR00893 187 VVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFI 266 (399)
T ss_pred cchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHH
Confidence 1000 1111122334567788999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCch
Q 008070 440 FANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYA 519 (579)
Q Consensus 440 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (579)
+.++.|++.||+++|+....... .....+.+...+...........+.......++.+.....+.......+..|++++
T Consensus 267 ~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (399)
T TIGR00893 267 GMILGGRLSDLLLRRGKSLVFAR-KTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIA 345 (399)
T ss_pred HHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHH
Confidence 99999999999999862221111 11111111111211112212233333333333333333334444445566788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHH
Q 008070 520 GVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 520 g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~~l~~~~~~~ 570 (579)
|+++|+.+.+..+|..++|.+.|.+.+..| |...+.+.+++.+++.++.+.
T Consensus 346 g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 346 GLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988 999999988888777766544
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3.9e-31 Score=282.16 Aligned_cols=370 Identities=29% Similarity=0.493 Sum_probs=278.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHH
Q 008070 204 KRWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 204 ~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
.....+++.+..+++..+++++.|+++||+|+|+++.++.++++++.+++.++...+++.+++.|+++|++.+...+...
T Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~ 153 (465)
T TIGR00894 74 SGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATH 153 (465)
T ss_pred CHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHH
Confidence 34557788888889999999999999999999999999999999998887665322678899999999999999999999
Q ss_pred HHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH
Q 008070 284 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 362 (579)
Q Consensus 284 ~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~-~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~ 362 (579)
.++.+|+|+++|++++++...+..+|.++++++++.+.+. .+||+.|++.+++.++..++++...+++|+..++..+++
T Consensus 154 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 233 (465)
T TIGR00894 154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFE 233 (465)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHH
Confidence 9999999999999999999999999999999999999988 499999999999888877777777777665433322222
Q ss_pred HhhhhcC--CcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHH
Q 008070 363 KRHILGG--SISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVF 440 (579)
Q Consensus 363 ~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig 440 (579)
++...+. ....+.....+++++++++.+|...+..++.....+.+.+|+|.|+.+.+|++..+.+++.++..++.+++
T Consensus 234 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~ 313 (465)
T TIGR00894 234 KKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLC 313 (465)
T ss_pred HHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHH
Confidence 2211111 01111112346888999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHHHHhhhhhccCcchHH-HHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 441 ANMGGWIADTLVSKGLSITA-VRKIMQSIGFLGPAFFLTQLSH-VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 441 ~~~~g~l~dr~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
.++.|+++||+++|+..... .+.....++.++.......... .......++++.++++..............+..|+.
T Consensus 314 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 393 (465)
T TIGR00894 314 SIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRF 393 (465)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhH
Confidence 99999999998866543221 1112222222222221111111 222233333333333333333333434445566789
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQR---GSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~---~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.|.+.|+.++.+.+++.++|.+.|.+.+. .+|..+|.+.+++.+++.++..+..+
T Consensus 394 ~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 394 LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 99999999999999999999999998875 34888999998888888777665543
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.2e-31 Score=283.83 Aligned_cols=357 Identities=16% Similarity=0.147 Sum_probs=257.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHh-----hhccCHHHHHHHHHHHHhhhhchhhH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV-----AARIGLPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~-----a~~~~~~~ll~~r~l~Gig~g~~~~~ 281 (579)
.+.++.+..++...+++++.|+++||+|+|+++.++.++++++.++.++ ++ +++.+++.|+++|++.+...+.
T Consensus 65 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~ 142 (467)
T PRK09556 65 ELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPC 142 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchH
Confidence 4455555666666777799999999999999999988888877776665 46 8999999999999999999999
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc---CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF---GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~---gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
..+++++|+|+++|++++|++..+.++|.++++++..++.... +||..|.+.+++.++..++.+++.++.|++....
T Consensus 143 ~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~ 222 (467)
T PRK09556 143 SYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG 222 (467)
T ss_pred HHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC
Confidence 9999999999999999999999999999999999988776643 6999999888888777776666666655432211
Q ss_pred cHHHHhh-h---hcCCcccccccc-h-hHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHH
Q 008070 359 RAEEKRH-I---LGGSISKEAVSV-I-PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVL 432 (579)
Q Consensus 359 ~~~~~~~-~---~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~ 432 (579)
+.++... . .....++++... . -.+.++++|.+|...+..++.....++...|+|.|+++.+|++..++++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~ 302 (467)
T PRK09556 223 KAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTL 302 (467)
T ss_pred ChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 1111000 0 000000001110 1 12336889999999999998888888889999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHhhhhhhhhhhhhhhc
Q 008070 433 PWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNH 511 (579)
Q Consensus 433 ~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 511 (579)
..++.+++.++.|+++||+++|+...... ....+...+.. ........ ..+..+.++.+.............
T Consensus 303 ~~~~~~ig~~~~G~lsDr~g~r~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 375 (467)
T PRK09556 303 FEIGALVGSLLWGWLSDLANGRRALVACI-----ALALIIFTLGV--YQHATSEYMYLASLFALGFLVFGPQLLIGVAAV 375 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHH-----HHHHHHHHHHH--HHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999999887543211 11111111111 11122222 223333333222222222122334
Q ss_pred cccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHh------------cCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 512 QDIGPRYAGVLLGLSNTAGVL-AGVFGTAATGYILQ------------RGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 512 ~~~~~~~~g~~~g~~~~~~~l-g~~ig~~l~g~l~~------------~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+..|++.+|++.|+.+...++ |.+++|.+.|++.| ..||+..|.+.+++.+++.++.+.+.
T Consensus 376 ~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 376 GFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778999999999999997 77999999999999 57899999999888888877766553
No 9
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.98 E-value=1.6e-29 Score=268.46 Aligned_cols=364 Identities=15% Similarity=0.165 Sum_probs=253.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc--cCHHHHHHHHHHHHhhhhchhhHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~--~~~~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
....++....+++..++++++|+++||+|||++++++.++.+++.+++++.+. .+++.+++.|++.|++.+...+...
T Consensus 63 ~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~ 142 (452)
T PRK11273 63 GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCG 142 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHH
Confidence 45677777888888899999999999999999999999999999998887631 1577889999999999998888888
Q ss_pred HHHhcccCcCchhHHHHHHHHHHHHHH-HHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH
Q 008070 284 NMLSKWIPVSERSRSLAFVYSGMYLGS-VTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 362 (579)
Q Consensus 284 ~~i~~~~~~~~r~~~~g~~~~~~~lG~-~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~ 362 (579)
..+.+++|+++|+++++++..+..+|. +.+|+++..+....+||+.|++.+++.++..++.+++.+++|++....++++
T Consensus 143 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (452)
T PRK11273 143 RTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEE 222 (452)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhh
Confidence 899999999999999999999999986 4566654444444599999999988877776666666666554321111111
Q ss_pred -HhhhhcC--Cccccccc-chh-HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHH
Q 008070 363 -KRHILGG--SISKEAVS-VIP-WKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTM 437 (579)
Q Consensus 363 -~~~~~~~--~~~~~~~~-~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~ 437 (579)
+.+..+. ..+.++.. ... .+.+++++.+|...+..++.....+....|+|.|+++..|++..+++.+..+..++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~ 302 (452)
T PRK11273 223 YKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAG 302 (452)
T ss_pred hhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 0000000 00000001 111 234678999999988888888888888899999999988999999999888888999
Q ss_pred HHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHhhhhhhhhhhhhhhccccCC
Q 008070 438 AVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGP 516 (579)
Q Consensus 438 ~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (579)
+++.++.|+++||+++++.... ......+................. ..+..+.++.+.............+..|+
T Consensus 303 ~~g~~~~G~l~dr~~~~r~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 378 (452)
T PRK11273 303 IPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK 378 (452)
T ss_pred HHHHHHHHHHHHHHccCCcchH----HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh
Confidence 9999999999999954321111 111111111111111111111222 22222222222211111111223456788
Q ss_pred CchhHHHHHHHHHHHHHHHH-HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 517 RYAGVLLGLSNTAGVLAGVF-GTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 517 ~~~g~~~g~~~~~~~lg~~i-g~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
+.+|+++|+.+....+|+.+ +|.+.|++.|+.||+..|.++++++++++++...+.+
T Consensus 379 ~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 379 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998888765 7999999999999999999988888888777665544
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=8.8e-30 Score=266.86 Aligned_cols=347 Identities=17% Similarity=0.200 Sum_probs=252.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...+.++.+..+++..+++++.|++.||+|||+++.++.++++++.+++++++ +++.+++.|++.|++.+...+....
T Consensus 42 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 119 (412)
T TIGR02332 42 ATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT--GPESLYLLRILVGIAEAGFLPGILL 119 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 44567788888888999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc------ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~------~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
++.|++|+++|+++++++..+..+|.++++++++++.+ ..|||+.|++.+++.++..++.+++.+|+|++.+..
T Consensus 120 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l 199 (412)
T TIGR02332 120 YLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWL 199 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCC
Confidence 99999999999999999999999999999999998864 369999999998888877776777777776543211
Q ss_pred cHHHHh---hh-hcCC-----cc----cccc-cchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCh
Q 008070 359 RAEEKR---HI-LGGS-----IS----KEAV-SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV-LKFNL 423 (579)
Q Consensus 359 ~~~~~~---~~-~~~~-----~~----~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~-~g~s~ 423 (579)
.+++++ +. .... .+ +.+. ....++.++ ++.+|...+..++.....+.+.+|+|.|+++. .|++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~ 278 (412)
T TIGR02332 200 DEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSN 278 (412)
T ss_pred CHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence 111110 00 0000 00 0000 012344444 57888888888888888999999999999873 36788
Q ss_pred hhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhh
Q 008070 424 TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFS 503 (579)
Q Consensus 424 ~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
.+++.+.....++.+++.++.|+++||+++|+..... ...+....+.+... ..........+.....+....
T Consensus 279 ~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~- 350 (412)
T TIGR02332 279 IMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTAL------PYLFAAAGWLLASA-TDHNLIQLLGIIMASMGSFSA- 350 (412)
T ss_pred HHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHH------HHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHhhhh-
Confidence 8889999999999999999999999999977532211 01111111111111 112221111111111111111
Q ss_pred hhhhhhh-ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHH
Q 008070 504 QSGLYSN-HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYI 562 (579)
Q Consensus 504 ~~~~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~-g~~~~~~~~~~~~~ 562 (579)
.+..... .+..+++.+++++|+.+...++|++++|.+.|.+.|.. +|...+.+++++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~~ 411 (412)
T TIGR02332 351 MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALLV 411 (412)
T ss_pred hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHHh
Confidence 1212222 33467789999999999999999999999999999986 59999887776543
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.98 E-value=2.9e-29 Score=264.87 Aligned_cols=346 Identities=14% Similarity=0.158 Sum_probs=239.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCH--------HHHHHHHHHHHhhhhchh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGL--------PFLLIMRAFMGIGEGVAM 279 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~--------~~ll~~r~l~Gig~g~~~ 279 (579)
+..+.+..+++..++++++|+++||+|||+++.++.++++++.+++++++ ++ ..++++|+++|++.|..+
T Consensus 65 ~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~ 142 (432)
T PRK10406 65 TAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVGGEY 142 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhH
Confidence 34455677788889999999999999999999999999999999999988 54 358899999999999999
Q ss_pred hHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCcchHHHHhhHHHHHHHHHHHhhhcCC
Q 008070 280 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSS 351 (579)
Q Consensus 280 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~--------~~~gwr~~f~i~~~~~li~~~l~~~~~~~~ 351 (579)
+...+++.|++|+++|+++.++...+...|.++++++...+. ..+|||++|++.+++.++... .....||+
T Consensus 143 ~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~ 221 (432)
T PRK10406 143 GTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDET 221 (432)
T ss_pred hhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCC
Confidence 999999999999999999999999888888888887765543 257999999987776655432 22223332
Q ss_pred CCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCChhhhhHHh
Q 008070 352 PKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCH-NWGTFILLTWMPTYYNQVLKFNLTESGLFC 430 (579)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~ 430 (579)
++.+ . +.. ....++++++++++.+...+..++. ...++.+..|+|.|+.+.+|++..+.+...
T Consensus 222 ~~~~----~-~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~ 285 (432)
T PRK10406 222 SQQE----T-RAL-----------KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIM 285 (432)
T ss_pred chHH----H-hhh-----------cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 2110 0 000 0012467788888887766655543 666778889999999888899998998888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-
Q 008070 431 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS- 509 (579)
Q Consensus 431 ~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 509 (579)
.+..+...++.++.|+++||++||+...... .+ ..+....+. ............+.+..++.+...........
T Consensus 286 ~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~--~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (432)
T PRK10406 286 TAALFVFMLIQPLIGALSDKIGRRTSMLCFG--SL--AALFTVPIL-SALQNVSSPYAAFGLVMCALLIVSFYTSISGIL 360 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchHHHHHHH--HH--HHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999987543211 00 111111111 11111122222222222222222222222223
Q ss_pred hccccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 008070 510 NHQDIGPRYAGVLLGLSNTAGVL-AGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERV 577 (579)
Q Consensus 510 ~~~~~~~~~~g~~~g~~~~~~~l-g~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 577 (579)
..+.+|++.|+++.|+.+...++ .+...|.+.+.+.+...+...+++.+++.+++.+..+++.++.|.
T Consensus 361 ~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~~~~ 429 (432)
T PRK10406 361 KAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKG 429 (432)
T ss_pred HHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 34557789999999999887665 355577878865433446666777777777777766666665554
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=2.6e-29 Score=261.84 Aligned_cols=340 Identities=15% Similarity=0.156 Sum_probs=254.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...+.++.+..+++..++.++.|+++||+|||+++..+.++++++.+++++++ +++.+++.|+++|++.+...+....
T Consensus 43 ~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~ 120 (393)
T PRK09705 43 FSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--QSALLLSSALLGGVGIGIIQAVMPS 120 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhH
Confidence 44567888888889999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK 363 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~ 363 (579)
++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+.+.+.++..++..+..+...++.|+++++. +
T Consensus 121 ~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 195 (393)
T PRK09705 121 VIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKT----T 195 (393)
T ss_pred HHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC----C
Confidence 9999996 88999999999999999999999999988875 8999987766665544333333322222211000 0
Q ss_pred hhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHH
Q 008070 364 RHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 443 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~ 443 (579)
...++.++++..|.+.+..++....++....|+|.|+.+ +|++..+++.+.++..++.++++++
T Consensus 196 ---------------~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~ 259 (393)
T PRK09705 196 ---------------TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALL 259 (393)
T ss_pred ---------------cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHH
Confidence 011234567788877777777778888889999999988 7999999999999999999999999
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccC-CCchhHH
Q 008070 444 GGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIG-PRYAGVL 522 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~ 522 (579)
.+++.||+++++....+. .+...+................ ...+.+.....+.......+..+ ++++|+.
T Consensus 260 ~g~l~~r~~~~~~~~~~~-------~l~~~~~~~~~~~~~~~~~~~~--~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~ 330 (393)
T PRK09705 260 MPAMARHQDRRKLLMLAL-------VLQLVGFCGFIWLPLQLPVLWA--MVCGLGLGGAFPLCLLLALDHSVQPAIAGKL 330 (393)
T ss_pred HHHHHhhccchHHHHHHH-------HHHHHHHHHHHHccchHHHHHH--HHHHHhccchHHHHHHHHHhhcCCHHHHHHH
Confidence 999999999886544321 1111111111111111122211 22223332333333333344444 4688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLVWNLFATGER 576 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~~l~~~~~~~~~~~~~ 576 (579)
+|+.+....++..++|.+.|++.|..| |...|.+..++++++.++...+.++++
T Consensus 331 ~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 331 VAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999854 888888888887777777666655544
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.98 E-value=4.7e-29 Score=256.35 Aligned_cols=336 Identities=13% Similarity=0.038 Sum_probs=239.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.+..+++..+++++.|+++||+|||++++.+.+....+.+.....+ +++.+++.|+++|++.+. .......+
T Consensus 27 ~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~R~l~G~g~~~-~~~~~~~~ 103 (368)
T TIGR00903 27 ELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYEWLLACQLLAALGQPF-LLNAFAPA 103 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhHhHH-HHHHHHHH
Confidence 456777888888999999999999999999887666555545443333335 899999999999999985 55666777
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
++++|+++|++++++...+..+|.++++++++++.+.+|||+.|++.+++.++..++.++..||+|++.++..+.+
T Consensus 104 ~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~---- 179 (368)
T TIGR00903 104 ASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFK---- 179 (368)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchH----
Confidence 9999999999999999999999999999999999999999999999999888887777777887665432110000
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGW 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~ 446 (579)
....++++++++|.+|.+.+..++....++++.+|+|.|+++ .|++.. .+....+..+.+.++ .++
T Consensus 180 ---------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~ 245 (368)
T TIGR00903 180 ---------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAV 245 (368)
T ss_pred ---------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHH
Confidence 001246788999999999999999999999999999999987 688865 566555555555554 467
Q ss_pred HhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHH
Q 008070 447 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGL 525 (579)
Q Consensus 447 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~ 525 (579)
+.||..|++.......... .+........ .........+.+..+..+......+.... ..+..|++.||++.|+
T Consensus 246 ~~d~~~r~~~r~~~~~~~~---~~~a~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~ 320 (368)
T TIGR00903 246 IPDRVARAGLRSIYIRAAA---LLIAAFFLAL--AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGA 320 (368)
T ss_pred hhHHhhhhhhHHHHHHHHH---HHHHHHHHHH--HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccch
Confidence 8887765421111000011 1111111111 11111222222333333323333233333 3455677899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 008070 526 SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
.+..+++++.++|++.+.+.. |....|.+.++..+++.+..++
T Consensus 321 ~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 321 IGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998884 7888888888888887777653
No 14
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=7.5e-29 Score=258.28 Aligned_cols=328 Identities=17% Similarity=0.178 Sum_probs=241.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.+......+...+++++.|+++||+|||++++.+.++.+++.+++++++ +++.+++.|+++|++.+...+...+++
T Consensus 56 ~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i 133 (394)
T PRK10213 56 VAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLT 133 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345666667777888899999999999999999999999999999999988 899999999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.|++|+++|++++++...+.++|.++||++++++.+.+|||+.|++.+++.++..++.....|+.++++++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~--------- 204 (394)
T PRK10213 134 MRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH--------- 204 (394)
T ss_pred HHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCccccc---------
Confidence 99999999999999999999999999999999999999999999998877766555444444443321110
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWM-PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~-p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
.....+..+++|.++...+..++.....+....++ |.|.+ .+|+++.+.+++....+++.+++.++.+
T Consensus 205 ----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~~~~~ 273 (394)
T PRK10213 205 ----------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGTSLSS 273 (394)
T ss_pred ----------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 00123457889999887777666666666666776 55554 5799999999999999999999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLG 524 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g 524 (579)
++.||.+++ ... .......+..+.+... .+..+.......+.+.......+.... ..+.. |++.+++.+
T Consensus 274 ~l~~r~~~~-~l~------~~~~~~~~~~~~l~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 343 (394)
T PRK10213 274 FILKRSVKL-ALA------GAPLVLAVSALVLTLW--GSDKIVATGVAIIWGLTFALVPVGWSTWITRSL-ADQAEKAGS 343 (394)
T ss_pred HHHhccchh-HHH------HHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHC-cccHHHHHH
Confidence 999995433 211 1111111111111111 122222222222223233334444443 33444 466778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL 566 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~ 566 (579)
+.....++|..+|+.++|++.|..|+...+...+++.++..+
T Consensus 344 ~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 344 IQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 888888999999999999999999998888887766555443
No 15
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=9.4e-29 Score=265.03 Aligned_cols=347 Identities=16% Similarity=0.182 Sum_probs=230.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHH--------HHHHHHHHHhhhhchhhHHH
Q 008070 212 CFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF--------LLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 212 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~--------ll~~r~l~Gig~g~~~~~~~ 283 (579)
.++.+++..++++++|+++||+|||++++++.++++++.+++++++ +++. ++++|+++|++.|..++...
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~ 140 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGAS 140 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHH
Confidence 5778888999999999999999999999999999999999999999 6653 88999999999999999999
Q ss_pred HHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCC
Q 008070 284 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKED 355 (579)
Q Consensus 284 ~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~--------~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~ 355 (579)
+++.|++|+++|+++.++...+..+|.++|+.+...+. ..+|||+.|++.+++.++. ++.....||+|+..
T Consensus 141 ~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~ 219 (490)
T PRK10642 141 IFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQ 219 (490)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHH
Confidence 99999999999999999999988888888887665443 2579999999876655543 33334455554321
Q ss_pred hhhcHHHHhhhhcCCcccccccchhHHHHhhc-hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHH
Q 008070 356 PELRAEEKRHILGGSISKEAVSVIPWKLILSK-APVWA-LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLP 433 (579)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~ 433 (579)
......++.. .....+....++++++++ ++.+. .....++....++.+..|+|.|+++.+|++..+.++.....
T Consensus 220 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 295 (490)
T PRK10642 220 QHVDKLEQGD----REGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAI 295 (490)
T ss_pred HHHHhhhhhc----cccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 1110000000 000001112345555543 22222 22333445567788888999999887899988888877788
Q ss_pred HHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhcc
Q 008070 434 WLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQ 512 (579)
Q Consensus 434 ~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 512 (579)
.++.+++.++.|+++||+|||+.+..+. +...+..................+. ++.+.+.............+
T Consensus 296 ~~~~~~~~~~~g~l~dr~grr~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 369 (490)
T PRK10642 296 MIGMLFVQPVMGLLSDRFGRRPFVILGS------VALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPA 369 (490)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHH------HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999997543221 1111111111111111222222221 22222111111111222334
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHh
Q 008070 513 DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 513 ~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~-g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
..|++.||++.|+.+.+..+++.++|.+.|++.+.. ++...+.+..+..+++.+..++.
T Consensus 370 ~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 370 MFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 578899999999866667777889999999998864 45555555555555555555444
No 16
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=1.3e-28 Score=255.84 Aligned_cols=338 Identities=17% Similarity=0.164 Sum_probs=246.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.+...++..++++++|++.||+|||+++.++.++.+++.+++++++ +++.+++.|++.|++.+...+....++
T Consensus 39 ~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~ 116 (382)
T PRK10091 39 AAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVL 116 (382)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 356777888888999999999999999999999999999999999999999 899999999999999998888889999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.+++++++|++++++...+..+|..++|++++++.+..+||+.|++.+++.++..+..++..|+.+++.+. +.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~----- 190 (382)
T PRK10091 117 SKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG-GLR----- 190 (382)
T ss_pred HHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc-CHH-----
Confidence 99999999999999999999999999999999999989999999999888777666555555654322110 000
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGW 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~ 446 (579)
..+ +.++++..|...+..++...+.+....+++.|+.+.+|+++.+.+++.....++.++++++.++
T Consensus 191 ------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~ 257 (382)
T PRK10091 191 ------------EQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGR 257 (382)
T ss_pred ------------HHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHhe
Confidence 112 2456777777666655555556666677788888778999999999999999999999999999
Q ss_pred HhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccc-cCCCchhHHHHH
Q 008070 447 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQD-IGPRYAGVLLGL 525 (579)
Q Consensus 447 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~ 525 (579)
+.||+++++....+. .+......+........+...+..+..+.+......+......++ .+++..+.+ .
T Consensus 258 l~~r~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~ 328 (382)
T PRK10091 258 LSGRYSPLRIAAVTD-------FIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--G 328 (382)
T ss_pred eccccCchhHHHHHH-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--H
Confidence 999999887544221 111111111111111122222222222222222222222222233 233445544 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 526 SNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.+....+|.++||.+.|.+.|. .+|+..+.+.+++.++.......+.++
T Consensus 329 ~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK10091 329 GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRY 378 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4677899999999999999996 789999998887777666555544433
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=1.2e-28 Score=258.26 Aligned_cols=344 Identities=18% Similarity=0.203 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.+...++..++.++.|+++||+|||+++.++.++..++.+++++++ +++.+++.|++.|++.+...+...+++
T Consensus 51 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~ 128 (406)
T PRK11551 51 QMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALT 128 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 456666777777788889999999999999999999999999999999988 899999999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.|++|+++|++++++...+..+|..+++.+++.+.+..+||+.|++.+++.++.+++.....||+++...+....+..
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 206 (406)
T PRK11551 129 SEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-- 206 (406)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh--
Confidence 999999999999999999999999999999999988899999999988776666655555566554321111000000
Q ss_pred hcCCcccccccchhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILS---KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 443 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~ 443 (579)
+ ...+..++ .+..+.+.+..++.....+....|+|.|+++ .|+++.+.+.+.....++.++++++
T Consensus 207 --------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~ 274 (406)
T PRK11551 207 --------A---PVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLL 274 (406)
T ss_pred --------h---hhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHH
Confidence 0 01111221 2333444444555555666777889999988 7999999999999999999999999
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHH
Q 008070 444 GGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLL 523 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 523 (579)
.|++.||+++++..... .......+..... ..+.....+..+..+.+.............+..|++++|++.
T Consensus 275 ~g~l~dr~g~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~ 346 (406)
T PRK11551 275 IGALMDRLRPRRVVLLI-------YAGILASLAALAA-APSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGV 346 (406)
T ss_pred HHHHHHHHhHHHHHHHH-------HHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhh
Confidence 99999999988654321 1111111111111 112222222223333333233333333345567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 524 GLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 524 g~~~~~~~lg~~ig~~l~g~l~~~~-g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
|+.+....+|.+++|.+.|.+.++. ++...+.....+.+++.++.+...++
T Consensus 347 g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 347 GAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred hHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999974 56666666666666666555544443
No 18
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=5.3e-29 Score=257.56 Aligned_cols=338 Identities=18% Similarity=0.166 Sum_probs=252.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...+.++.+...++..+++++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+....
T Consensus 37 ~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~ 114 (377)
T TIGR00890 37 VTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--SLAALYLTYGLASAGVGIAYGIALN 114 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHH
Confidence 45678888889999999999999999999999999999999999999999999 8999999999999999988888888
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
.+.+++| |+|++++++...+.++|.++++++.+.+.+..+||+.|++.+++.++..++.++..++++++..+.+.+
T Consensus 115 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 190 (377)
T TIGR00890 115 TAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIE--- 190 (377)
T ss_pred HHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcc---
Confidence 9999996 789999999999999999887777777777889999999999888887776666655433221110000
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
........++.++++.++.+.+..++..........+.+.|.++ +|.+..+.+.+.....++.++++++.
T Consensus 191 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (377)
T TIGR00890 191 ---------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFL 260 (377)
T ss_pred ---------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011235567888888888777777666666666777777766 78888889999999999999999999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHH
Q 008070 445 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLL 523 (579)
Q Consensus 445 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 523 (579)
|++.||+++|+....+. ........+............ ......+.+.............+..++++++++.
T Consensus 261 g~l~dr~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (377)
T TIGR00890 261 GALSDKIGRQKTMSIVF-------GISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANY 333 (377)
T ss_pred HHHHHHHhhhhhhhHHH-------HHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHh
Confidence 99999999987644321 111111111111111111111 1222222222222222222344556789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 008070 524 GLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGT 565 (579)
Q Consensus 524 g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~ 565 (579)
|+.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998888777654
No 19
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=5.4e-29 Score=263.33 Aligned_cols=365 Identities=16% Similarity=0.204 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc--cCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~--~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..++.....++..++.++.|+++||+|||++++++.++.+++.+++++.+. .+++.+++.|++.|++.+..++.....
T Consensus 63 ~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~ 142 (438)
T TIGR00712 63 LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRT 142 (438)
T ss_pred hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 456666777788888899999999999999999999999999888776531 156778899999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHH-HH
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE-EK 363 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~-~~ 363 (579)
+.|++|+++|++++++.+.+..+|..+++.+.+.+.. ..+||+.|++.+++.++..++.++..+|+|+.....+.+ .+
T Consensus 143 i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (438)
T TIGR00712 143 MVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR 222 (438)
T ss_pred HHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc
Confidence 9999999999999999999999999999888776444 579999999998888877666666666654321100000 00
Q ss_pred hhhhc---CCccccc-ccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHH
Q 008070 364 RHILG---GSISKEA-VSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAV 439 (579)
Q Consensus 364 ~~~~~---~~~~~~~-~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~i 439 (579)
.+... +..+.+. ......+.+++++.+|...+..++.....+.+..++|.|+++..|+++.+++++..+..+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i 302 (438)
T TIGR00712 223 NDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIP 302 (438)
T ss_pred cccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHH
Confidence 00000 0000000 0011123467889999988888888888888889999999998899999999999999999999
Q ss_pred HHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 440 FANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 440 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
+.++.|++.||+++++....+. .......+ .............+.. ...+.++.+.............+..+++.
T Consensus 303 g~~~~g~l~dr~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 378 (438)
T TIGR00712 303 GTLLCGWMSDKVFKGNRGATGV--FFMTLVTI--AVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA 378 (438)
T ss_pred HHHHHHHHHHHhccCcccHHHH--HHHHHHHH--HHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh
Confidence 9999999999997554322211 11111111 1111111111112221 12222222111111111122345567789
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 008070 519 AGVLLGLSNTAGVLAG-VFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGER 576 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~-~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 576 (579)
+|++.|+++....+++ +++|.+.|.+.|..||..++.+.+++.+++.++.+++.+++|
T Consensus 379 ~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 379 AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred eeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999888875 689999999999999999999988888888888877777765
No 20
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=1.4e-28 Score=256.59 Aligned_cols=338 Identities=14% Similarity=0.104 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.+...++..++.++.|++.||+|||++++.+.++.+++.+++++++ +++.+++.|+++|++.+...+...+++
T Consensus 43 ~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i 120 (394)
T PRK03699 43 SMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLI 120 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHh
Confidence 455666677788888999999999999999999999999999999999998 889999999999999998889999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
.+++|+++|++++++......+|..++|.+.+.+.. ..+||+.|++.+++.++..++.++. +.|+.+++..+ +.
T Consensus 121 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~-~~-- 195 (394)
T PRK03699 121 THVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFS--EFPALGKHAPK-AD-- 195 (394)
T ss_pred hhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhc--CCccccccCcc-cc--
Confidence 999999999999999999999999999999888764 5799999998888776655544432 22211111000 00
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
++. .+ ...++.++...+..++.....+.+..|+|.|+++.+|+++.+.+.+.+...++.++++++.+
T Consensus 196 --------~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g 262 (394)
T PRK03699 196 --------KPV----AK-EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFS 262 (394)
T ss_pred --------Ccc----cc-ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHH
Confidence 000 01 11245667777777777777888889999999888999999999999999999999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 525 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 525 (579)
++.||+++|+...... .+. ...+.+... ..+..+.....+..+.+.... .+.......+..++.+++..|.
T Consensus 263 ~l~dr~~~~~~l~~~~-----~~~--~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~g~ 333 (394)
T PRK03699 263 FIVRFFDLQRILTVLA-----GLA--LVLMYLFVN-TDDPSHLLYAILGLGFFSSAI-YTTIITLGSQQTKVASPKLVNF 333 (394)
T ss_pred HHHHHhchhhHHHHHH-----HHH--HHHHHHHHH-cCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHccCCCHHHHHH
Confidence 9999999987544211 111 111111111 122223333333333333322 2333333333345566788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 526 SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
......+|..++|.+.|++.+..|+...+++.+++.+++.++.+...+
T Consensus 334 ~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 334 ILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888887777655544433
No 21
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=5.8e-28 Score=255.17 Aligned_cols=345 Identities=17% Similarity=0.190 Sum_probs=235.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHH--------HHHHHHHHHHhhhhchhhHH
Q 008070 211 LCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 211 l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~--------~ll~~r~l~Gig~g~~~~~~ 282 (579)
.....+++..+++++.|+++||+|||++++++.++++++.+++++++ +++ .++++|+++|++.|..++..
T Consensus 69 ~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~ 146 (438)
T PRK09952 69 TFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGA 146 (438)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHH
Confidence 34466777888999999999999999999999999999999999999 665 58899999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc--------ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCC
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ--------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE 354 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~--------~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~ 354 (579)
..++.|++|+++|++..+....+..+|.+++..+...+.. .+|||+.|++.+++.++. +......||+|+.
T Consensus 147 ~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~ 225 (438)
T PRK09952 147 ALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhH
Confidence 9999999999999999999999999999999887776652 579999999877665432 2222223333211
Q ss_pred ChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHH
Q 008070 355 DPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALII-SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLP 433 (579)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~ 433 (579)
. ...++. + +.++ .....+.++++++.+...+ ..++..+..+....|.|.|+++.+|++......+....
T Consensus 226 ~---~~~~~~---~--~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~ 295 (438)
T PRK09952 226 E---QQQHEQ---A--AAKK--RIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLV 295 (438)
T ss_pred H---HHHhhc---c--cccc--cCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 0 000000 0 0000 1112234567777666544 45555667777888999999888899887666556666
Q ss_pred HHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhh-hhhhhcc
Q 008070 434 WLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQS-GLYSNHQ 512 (579)
Q Consensus 434 ~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 512 (579)
++..+++.++.|+++||++||+....+. . ...+............+..+..++...+..+......+ ......+
T Consensus 296 g~~~~i~~~~~g~l~Dr~grr~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e 370 (438)
T PRK09952 296 GGLSCLTIPCFAWLADRFGRRRVYITGA--L---IGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTE 370 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHH--H---HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888999999999999997654321 1 11111111111111122222222222222222222222 2233445
Q ss_pred ccCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 513 DIGPRYAGVLLGLSNTAG-VLAGVFGTAATGYILQR--GSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 513 ~~~~~~~g~~~g~~~~~~-~lg~~ig~~l~g~l~~~--~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.+|++.|+++.|+.+... .+++.++|.+.|++.+. .+|...+.+.+++.+++.+..+.+++
T Consensus 371 ~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 371 MFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 567788999999866554 48999999999999885 35888888888888888777666544
No 22
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=7.4e-28 Score=256.78 Aligned_cols=346 Identities=14% Similarity=0.088 Sum_probs=237.1
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcC
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS 293 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 293 (579)
..+++..++.++.|+++||+|||+++..+.++++++.+++++++ +++.+++.|++.|++.+.. .....++++++|++
T Consensus 79 ~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~ 155 (476)
T PLN00028 79 ASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGK 155 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChh
Confidence 34445555669999999999999999999999999999999998 8899999999999998864 44567899999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhc---------ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 294 ERSRSLAFVYSGMYLGSVTGLAVSPILIQ---------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 294 ~r~~~~g~~~~~~~lG~~lgp~i~~~l~~---------~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
+|++++++......+|..+++.+.+.+.. ..|||+.|++.+++.++..++.+++.++.|+...+ +.+++
T Consensus 156 ~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~--~~~~~ 233 (476)
T PLN00028 156 IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR--ELKKS 233 (476)
T ss_pred heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh--hHHhc
Confidence 99999999988777777777666654432 25899999999998887777666665554432211 10000
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
.. .++......+++.++++++|.+.+..++.....+.+..++|.|+.+.+|++..+++.+.++..++.++++++.
T Consensus 234 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~ 308 (476)
T PLN00028 234 ----GT-MPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAG 308 (476)
T ss_pred ----Cc-cccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 00 0001111345667788898888877776666667778889999988889999999999999999999999999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 445 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 445 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
|+++||+++|+.... +.....+..++.++..............++.+.+.................++.++.+|++.|
T Consensus 309 G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 386 (476)
T PLN00028 309 GYLSDVAARRFGMRG--RLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISG 386 (476)
T ss_pred HHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhh
Confidence 999999987632111 001111111111111111122222222222222222222222223333444567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+.+....+|+++++.+.+ ..+..+|...|.+.+++.+++.++.++.+
T Consensus 387 ~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 387 LTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 988877777777776654 22345799999999988888888777664
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=1.1e-27 Score=251.18 Aligned_cols=342 Identities=14% Similarity=0.072 Sum_probs=249.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.+..+...++..+..++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|+++|++.+...+...+++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i 126 (406)
T PRK15402 49 WVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAI 126 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHH
Confidence 445556677778888889999999999999999999999999999999988 899999999999999998889999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.|++|+++|.+++++......+|..+||.+++.+.+..+||+.|++.+++.++..+..++..|+++++.++....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 201 (406)
T PRK15402 127 QESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL----- 201 (406)
T ss_pred HHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-----
Confidence 999999999999999999999999999999999999899999999988888776665555555543221111000
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGW 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~ 446 (579)
.....+++.++++|.++...+..++..........+.|.|+.+.+|+++.+.++......++.+++.++.++
T Consensus 202 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~ 273 (406)
T PRK15402 202 --------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLAR 273 (406)
T ss_pred --------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001134567889999998888777777666677778899988888999999998888778889999999999
Q ss_pred HhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHH
Q 008070 447 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 525 (579)
Q Consensus 447 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 525 (579)
+.||+++++....+. ....++........ .......+ ......+.+.+... ..+..........++++|++.++
T Consensus 274 l~~r~~~~~~~~~~~--~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~g~g~~~-~~~~~~~~~~~~~~~~~g~~~~~ 348 (406)
T PRK15402 274 LTSRRPLRSLIRMGL--WPMVAGLLLAALAT--VISSHAYLWLTAGLSLYAFGIGL-ANAGLYRLTLFSSDVSKGTVSAA 348 (406)
T ss_pred HHHhcCHHHHHHHHH--HHHHHHHHHHHHHH--HcccccHHHHHHHHHHHHHHHHH-HhhhHHHHHhhhccccccHHHHH
Confidence 999999887544321 11111222111111 11112222 22222333333322 22232233333456899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 008070 526 SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~ 568 (579)
++....++..+|+.+.+.+.+..+........++..++..++.
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLV 391 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998775554444444444443333
No 24
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=7.5e-28 Score=263.62 Aligned_cols=342 Identities=15% Similarity=0.108 Sum_probs=229.6
Q ss_pred HHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchh
Q 008070 217 LLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERS 296 (579)
Q Consensus 217 ~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~ 296 (579)
++..++.+++|+++||+|||++++++.++.+++.+++++++ +++.++++|++.|++.++..+...+++.|++|+++|+
T Consensus 213 lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg 290 (742)
T TIGR01299 213 LGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRG 290 (742)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 34444558999999999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-------------cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChh---hcH
Q 008070 297 RSLAFVYSGMYLGSVTGLAVSPILIQK-------------FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE---LRA 360 (579)
Q Consensus 297 ~~~g~~~~~~~lG~~lgp~i~~~l~~~-------------~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~---~~~ 360 (579)
+.++++.++..+|.++++.++..+... .+||+.+++.++..++. ++.+++.||+|+.... ..+
T Consensus 291 ~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~e 369 (742)
T TIGR01299 291 EHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDE 369 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHH
Confidence 999999999999999999988776643 35889888777665544 4455566777642100 000
Q ss_pred HH--HhhhhcC---------------------Cc----c--cccc----------------cchhHHHHhhc---hHHHH
Q 008070 361 EE--KRHILGG---------------------SI----S--KEAV----------------SVIPWKLILSK---APVWA 392 (579)
Q Consensus 361 ~~--~~~~~~~---------------------~~----~--~~~~----------------~~~~~~~l~~~---~~~~~ 392 (579)
.. ....... .. + .... .+..++.+++. +..+.
T Consensus 370 A~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~ 449 (742)
T TIGR01299 370 AWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK 449 (742)
T ss_pred HHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH
Confidence 00 0000000 00 0 0000 00123444433 23566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh----h-------------------------------------CC-----C----
Q 008070 393 LIISHFCHNWGTFILLTWMPTYYNQV----L-------------------------------------KF-----N---- 422 (579)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~p~~l~~~----~-------------------------------------g~-----s---- 422 (579)
+++..++..++++++..|+|.++.+. + |+ .
T Consensus 450 l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (742)
T TIGR01299 450 LMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDS 529 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccc
Confidence 77788888899999999999876541 0 00 0
Q ss_pred ----------------------------------------------------------------hhhhhHHhHHHHHHHH
Q 008070 423 ----------------------------------------------------------------LTESGLFCVLPWLTMA 438 (579)
Q Consensus 423 ----------------------------------------------------------------~~~~g~~~~~~~~~~~ 438 (579)
.....+...+..++.+
T Consensus 530 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i 609 (742)
T TIGR01299 530 LFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVL 609 (742)
T ss_pred cccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHH
Confidence 0012333556668889
Q ss_pred HHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCC
Q 008070 439 VFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPR 517 (579)
Q Consensus 439 ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 517 (579)
++.++.|+++||+|||+++..+. .+..+..+++... .+...++++.++++++.... .+.... ..+.+|++
T Consensus 610 ~G~il~g~L~Dr~GRr~~l~~~~-------~lsai~~ll~~~~-~s~~~ll~~~~l~g~~~~~~-~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 610 PGNIVSALLMDKIGRLRMLAGSM-------VLSCISCFFLSFG-NSESAMIALLCLFGGLSIAA-WNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHH-------HHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCHH
Confidence 99999999999999997643221 1111111111111 11222222223333333333 333334 44556779
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 518 YAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 518 ~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
.|++++|+.+.+..+|.+++|+++|.+.+. +....|++.+++.++++++.+++
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999998875 46677777777777776666555
No 25
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=1e-27 Score=250.75 Aligned_cols=348 Identities=13% Similarity=0.104 Sum_probs=249.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH---hhhccCHHHHHHHHHHHHhhhhchhhHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP---VAARIGLPFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~---~a~~~~~~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
.+.++.....+...++.++.|++.||+|||+++..+.++.+++.+++. +.. .+++.+++.|++.|++.+...+...
T Consensus 49 ~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~i~G~g~~~~~~~~~ 127 (402)
T TIGR00897 49 QSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGH-ANYPLILLFYGIRGLGYPLFAYSFL 127 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC-ccHHHHHHHHHHHHcchHHHHhHHH
Confidence 456667777788888999999999999999999999999998876653 221 1688889999999999988888888
Q ss_pred HHHhcccCcCchhHHHHHHHHHHHHHH-HHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH
Q 008070 284 NMLSKWIPVSERSRSLAFVYSGMYLGS-VTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 362 (579)
Q Consensus 284 ~~i~~~~~~~~r~~~~g~~~~~~~lG~-~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~ 362 (579)
+.+.+++|+++|++++|+..++.++|. +++|++++++.+.+||+..+|......++..++.++..++.+++..+.++.
T Consensus 128 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (402)
T TIGR00897 128 VWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTRE- 206 (402)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCc-
Confidence 889999999999999999999999997 689999999998889776666554443333333444444332211110000
Q ss_pred HhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHH
Q 008070 363 KRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFAN 442 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~ 442 (579)
+..+....++.++++|.++...+..++.....+.+.++.|.|+++ +|++..+.+.+.....++.+++.+
T Consensus 207 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~ 275 (402)
T TIGR00897 207 ----------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNV 275 (402)
T ss_pred ----------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHH
Confidence 000111235678899999988888888888888889999999876 899999999988888999999999
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhH
Q 008070 443 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGV 521 (579)
Q Consensus 443 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 521 (579)
+.|++.||+++|+..... .....++....+...... ....+...+..+..+.+.... .+. .....+.+|+++|+
T Consensus 276 ~~g~l~dr~~~~~~~~~~---~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~-~~~~~~~~~~~~g~ 350 (402)
T TIGR00897 276 IFGIVGDKLGWMNTVRWF---GGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY-VPL-AAVFPTLAPKHKGA 350 (402)
T ss_pred HHHHHHHhhcchhHHHHH---HHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-HHH-HHHHHhhCcchhHH
Confidence 999999999988653210 011111111111111111 112222223333333333222 222 23334567889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 522 LLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 522 ~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
++|+.+....+++.++|.+.|.+.+..|+...+++.+++.+++.++..+++
T Consensus 351 ~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 351 AMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999988888877766553
No 26
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=5.2e-28 Score=250.51 Aligned_cols=338 Identities=15% Similarity=0.101 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHH-HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
..+.++.+...+...+.+++.|+++||+|||+.++ .+.++..++.+++++++ +++.+++.|++.|.+.+...|...+
T Consensus 33 ~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~p~~~~ 110 (375)
T TIGR00899 33 AMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNR--NYFLLLVLGVLLSSFASTANPQLFA 110 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 34566667777778888899999999999988755 45666667778888888 8888999999999888888888889
Q ss_pred HHhcccCcCchhHH--HHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH
Q 008070 285 MLSKWIPVSERSRS--LAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 362 (579)
Q Consensus 285 ~i~~~~~~~~r~~~--~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~ 362 (579)
++.++.|+++|++. .++...+.++|.++||++++++.+.++||+.|++.+++.++..++.++..||.|++.++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 187 (375)
T TIGR00899 111 LAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL--- 187 (375)
T ss_pred HHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc---
Confidence 99999887777654 6888888999999999999999999999999999988877777666666666543221110
Q ss_pred HhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHH
Q 008070 363 KRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFAN 442 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~ 442 (579)
. ..+.+..++++.++.+.+..++..........++|.|+.+.+|.++.+.+.+.....+..+++.+
T Consensus 188 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 253 (375)
T TIGR00899 188 T--------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFML 253 (375)
T ss_pred C--------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 01223356677777666666655555566667889999888899999999888777777888889
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHH
Q 008070 443 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 522 (579)
Q Consensus 443 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 522 (579)
+.|++.||+++|+....+. ....+ ....... .+..+.......+.+...+...+.......+..|++++++
T Consensus 254 ~~g~l~~r~g~~~~~~~~~-----~~~~~--~~~~~~~--~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 324 (375)
T TIGR00899 254 LAGYLIKRFGKRRLMLLAA-----LAGVA--FYTGLAA--DNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAA 324 (375)
T ss_pred hHHHHHHHhcchhHHHHHH-----HHHHH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHH
Confidence 9999999999987543221 11111 1111111 1222222222222222222233333344455566778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+|+++...++|..++|.+.|.+.+..||+..|.+.+++.+++.++...+
T Consensus 325 ~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 325 TTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999998888877766544
No 27
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=4.8e-29 Score=258.07 Aligned_cols=343 Identities=18% Similarity=0.173 Sum_probs=251.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.+...++..++.++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+...++
T Consensus 30 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~ 107 (379)
T TIGR00881 30 TDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST--SLWVMAALWALNGIFQGMGWPPCGRT 107 (379)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhccccCCchHHH
Confidence 3457777888888899999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGL-AVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp-~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
+.|++|+++|++++++...+..+|.++++ ++++.+.+..+||+.|++.+++.++..++.++..++++++......++..
T Consensus 108 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T TIGR00881 108 VTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP 187 (379)
T ss_pred HHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc
Confidence 99999999999999999999999999999 57777777889999999988887776666666666554332111110000
Q ss_pred -hh-h---cCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHH
Q 008070 365 -HI-L---GGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAV 439 (579)
Q Consensus 365 -~~-~---~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~i 439 (579)
+. . ....++........+.++++|.++.+.+..++.......+..+.|.|+.+.+|+++.+.+++.....++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 267 (379)
T TIGR00881 188 NEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLV 267 (379)
T ss_pred ccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcch
Confidence 00 0 000001111123456778899999998888888888888999999999988899999999999999999999
Q ss_pred HHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 440 FANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 440 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
+.++.+++.||..+++..... ..........+...... ..+........+..+.+.............+..|++.
T Consensus 268 ~~~~~g~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 343 (379)
T TIGR00881 268 GTLLAGWLSDKLFNGRRGPLA----VFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA 343 (379)
T ss_pred hHHHHHHHHHHHcCCcchHHH----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch
Confidence 999999999987544322211 11111111111111111 1112222222223332222222222233455678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVF 554 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~ 554 (579)
+|++.|+.+....+|..++|.+.|.+.|..||+..|
T Consensus 344 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 344 AGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999999999999998887643
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=5.5e-28 Score=259.30 Aligned_cols=330 Identities=15% Similarity=0.127 Sum_probs=245.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
+.++.....+......+++|+++||+|||++++++.+++.++.+++++++ +++.++++|+++|+|.+...+.....+.
T Consensus 43 ~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~ 120 (495)
T PRK14995 43 LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIR 120 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666667779999999999999999999999999999999999 9999999999999999999888888887
Q ss_pred ccc-CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcH-HHH--
Q 008070 288 KWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA-EEK-- 363 (579)
Q Consensus 288 ~~~-~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~-~~~-- 363 (579)
+++ |+++|++++|++.....+|..+||++++++.+.+||||.|++...+.++.+++.++..|+++++..+..+ ...
T Consensus 121 ~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~ 200 (495)
T PRK14995 121 ATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALM 200 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHH
Confidence 776 6789999999999999999999999999999999999999998888877777766666665432211110 000
Q ss_pred ------------hhhhcCC-----------------------cccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 008070 364 ------------RHILGGS-----------------------ISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 408 (579)
Q Consensus 364 ------------~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 408 (579)
....... +.+.+.+..+ ..+++++.++...+..++.....++..
T Consensus 201 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~ 279 (495)
T PRK14995 201 LIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFE 279 (495)
T ss_pred HHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHH
Confidence 0000000 0011112222 246788888888888888888888888
Q ss_pred HHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhc-cchhH
Q 008070 409 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH-VRTPA 487 (579)
Q Consensus 409 ~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 487 (579)
.++|.|+++.+|+++.++|+......++..++.++.|++.||+++|+....+. .+..++.. .+..... .+.+.
T Consensus 280 ~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~--~~~~~~~~----~l~~~~~~~~~~~ 353 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGM--ALSALSFY----GLAMTDFSTQQWQ 353 (495)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH--HHHHHHHH----HHHHhcCCCchHH
Confidence 89999999999999999999999999999999999999999999886443221 11111111 1111111 22222
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 488 MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
.....++.+.+.+....+......+.+|+++++.+.++.++...+|+.+|+.+.|.+.+
T Consensus 354 ~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 354 AWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333444444444444455555666788999999999999999999999999999875
No 29
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=3.1e-27 Score=245.53 Aligned_cols=324 Identities=16% Similarity=0.207 Sum_probs=239.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.....++..++.++.|+++||+|||+++.++.++.+++.+++++++ +++.+++.|++.|++.+...+...+++
T Consensus 41 ~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~ 118 (385)
T TIGR00710 41 IVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN--NIETLLVLRFVQAFGASAGSVISQALV 118 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 456777777888889999999999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.|++|+++|++++++......+|..+++.+++.+.+..+||+.|++.+++.++..++.++..|+.++++++.+.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 194 (385)
T TIGR00710 119 RDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQIST---- 194 (385)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCHHH----
Confidence 9999999999999999999999999999999999999999999999888877766666665555443222111111
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGW 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~ 446 (579)
....++++++++.++...+...+.....+....+.|.++.+.+|+++.+.+++.....++.+++.++.|+
T Consensus 195 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 264 (385)
T TIGR00710 195 ----------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGR 264 (385)
T ss_pred ----------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124566788999888887777777777778888899998889999999999999999999999999999
Q ss_pred HhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH-HHHhhhhhhhhhhhhhhccccCCCchhHHHHH
Q 008070 447 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCM-ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 525 (579)
Q Consensus 447 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 525 (579)
+.||+++|+....+. ....++.+.... ................ ..+.+.... .+.......+..|+.++++.++
T Consensus 265 l~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 339 (385)
T TIGR00710 265 FIKKWGAKSLLRMGL--ILFAVSAVLLEI--TAILGLGSWAMIIGPMMFVGIGNSMI-SSIAMAYALEDFPHVAGTASAL 339 (385)
T ss_pred HHHhcCHHHHHHHHH--HHHHHHHHHHHH--HHHhccchHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCcccchHHHHH
Confidence 999999987554321 111111111111 1111111222222222 222323223 3333333333346789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 526 SNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
.+.....++.+.+.+.+.+.+..++.
T Consensus 340 ~~~~~~~~g~i~~~~~~~~~~~~~~~ 365 (385)
T TIGR00710 340 FGTLRLVLGAIVGYLVSLIHGNTAWP 365 (385)
T ss_pred HHHHHHHHHHHHHHHHHhccccChHH
Confidence 99988876677777777554444443
No 30
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=1.1e-27 Score=246.58 Aligned_cols=329 Identities=15% Similarity=0.112 Sum_probs=242.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc---cCHHHHHHHHHHHHhhhhchhhH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR---IGLPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~---~~~~~ll~~r~l~Gig~g~~~~~ 281 (579)
...+.++.....+...+..+++|+++||+|||++++++.++..++.++.++... .+++.+++.|++.|++.+...+.
T Consensus 33 ~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 112 (365)
T TIGR00900 33 ASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPA 112 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 456677888888899999999999999999999999999998888887776641 26788999999999999999999
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHH
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE 361 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~ 361 (579)
..+++.|++|+++|++++++...+..+|.++||++++++.+..|||+.|++.++..++..++.+...++++++.++.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
T TIGR00900 113 YQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALS 192 (365)
T ss_pred HHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999887766655544443332222111111000
Q ss_pred HHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCChhhhhHHhHHHHHHHHHH
Q 008070 362 EKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL-TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVF 440 (579)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig 440 (579)
++. .+.....++.++++|.++...+..++......... .+.|.|.++.+|.+..+.+.+.....++.+++
T Consensus 193 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (365)
T TIGR00900 193 NAV---------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLG 263 (365)
T ss_pred hhH---------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 000 00111345667889999888888777777776666 78899998878999999999999999999999
Q ss_pred HHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchh
Q 008070 441 ANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAG 520 (579)
Q Consensus 441 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 520 (579)
.++.+++.||+++++....+ ................+.+...+..+..+.+.....+.......+.+|++++|
T Consensus 264 ~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 336 (365)
T TIGR00900 264 ALLLGLLGRYFKRMALMTGA-------IFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLG 336 (365)
T ss_pred HHHHHHHHHHhchhHHHHHH-------HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999988643321 11111111111111111222223333333333333333334455667889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 521 VLLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 521 ~~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
++.|+.+....++..++|.+.|.+.|..|
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 337 RVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999998754
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.7e-27 Score=251.29 Aligned_cols=337 Identities=17% Similarity=0.128 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
..++.....++..++.++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|+++|++.+...+....++.
T Consensus 55 ~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~ 132 (426)
T PRK12307 55 GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAV 132 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45666677788888899999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
|++|+++|++++++...+..+|.++++.+.+.+.+.++||+.|++.++..++ .+......|+++ +...+ +.....
T Consensus 133 ~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~---~~~~~-~~~~~~ 207 (426)
T PRK12307 133 ESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESK---EWEEA-KLSGKG 207 (426)
T ss_pred HhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCCh---HHHHh-hhhccc
Confidence 9999999999999999999999999999999999989999999875433222 211111112211 11000 000000
Q ss_pred cCCcccccccchhHHHHhhchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 368 GGSISKEAVSVIPWKLILSKAPVWALIISHF---CHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~---~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
+............++++++++.++...+... ......+.+..++|.|+.+ .|+++.+.+.+.+...++.++++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~ 286 (426)
T PRK12307 208 KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVW 286 (426)
T ss_pred cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000111225667788887765443322 2233334467789999988 69999999999999999999999999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHH
Q 008070 445 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLL 523 (579)
Q Consensus 445 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 523 (579)
|++.||+++|+....+. .+................... ...+..+...............+.+|++.+|+++
T Consensus 287 g~l~dr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 359 (426)
T PRK12307 287 GLCADRIGLKKTFSIGL-------LMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGT 359 (426)
T ss_pred HHHHHHhccHHHHHHHH-------HHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhh
Confidence 99999999986543221 111111111111111111211 1111111111111111122234557788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 008070 524 GLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVV 559 (579)
Q Consensus 524 g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~ 559 (579)
|+.+.+..+++.++|.+.|++.+..|+.....+..+
T Consensus 360 g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 360 GLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 999999999999999999999999887765444333
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=1.2e-27 Score=250.16 Aligned_cols=339 Identities=15% Similarity=0.169 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
+.++.+...++..++.++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+...+++.
T Consensus 49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 126 (405)
T TIGR00891 49 AASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVI 126 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 45666777788888889999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC--cchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH-Hh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG--WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE-KR 364 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g--wr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~-~~ 364 (579)
|++|+++|++++++...+..+|.++++.+++.+.+..+ ||+.|++.++..++.. +.....||+++..++.+.++ ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 205 (405)
T TIGR00891 127 ESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVR 205 (405)
T ss_pred HhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhh
Confidence 99999999999999999999999999999999988766 9999987655544433 33333444332111111000 00
Q ss_pred h----hhcCCcccccc---cchhHHHHh-hc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH
Q 008070 365 H----ILGGSISKEAV---SVIPWKLIL-SK-APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL 435 (579)
Q Consensus 365 ~----~~~~~~~~~~~---~~~~~~~l~-~~-~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~ 435 (579)
. ..+.....+.. .....+... ++ +.+..+.+...+..........++|.|+.+.+|++..+.+.+.....+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 285 (405)
T TIGR00891 206 TMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNI 285 (405)
T ss_pred hHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 0 00000000000 000011100 11 112223333334444455666788999988889999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhcccc
Q 008070 436 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDI 514 (579)
Q Consensus 436 ~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 514 (579)
+.+++.++.+++.||+++|+.+..+. ... .......... ....+...+. ...+.+.............+..
T Consensus 286 ~~~~g~~~~g~l~dr~g~~~~~~~~~-----~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (405)
T TIGR00891 286 GAIVGGCVFGFLGDWLGRRKAYVCSL-----LAG-QLLIIPVFAI--GANVAVLGLGLFFQQMLVQGIWGILPKHLGEYF 357 (405)
T ss_pred HHHHHHHHHHHHHHHhCchhhhHHHH-----HHH-HHHHHHHHHh--CCchHHHHHHHHHHHHHHccchhhHHHHHhhhC
Confidence 99999999999999999987654321 011 0111111111 1222222222 2222222222222233345557
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHH
Q 008070 515 GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVA 557 (579)
Q Consensus 515 ~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~ 557 (579)
|++.+|+++|+.+.+..++..++|++.|++.|+.| |..++...
T Consensus 358 ~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 358 PTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred CcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 78999999999999999999999999999999977 77666543
No 33
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=6.7e-27 Score=242.30 Aligned_cols=331 Identities=14% Similarity=0.120 Sum_probs=231.3
Q ss_pred HHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhh-----hccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 213 FSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA-----ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 213 ~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a-----~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
++..+...+.+++.|++.||+|.|+++.++.+++++.+++++++ + +++.+++.|++.|++ +..++.....++
T Consensus 77 ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig-g~~f~~~~~~vs 153 (462)
T PRK15034 77 ALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNT--PFGIFIVIALLCGFA-GANFASSMGNIS 153 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCC--CHHHHHHHHHHHHHH-HHhHHHHHHHHH
Confidence 33444455556888999999999999999999999999999987 6 899999999999998 668899999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----c-------------ccCcchHHHHhhHHHHHHHHHHHhhhc
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI-----Q-------------KFGWPSVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~-----~-------------~~gwr~~f~i~~~~~li~~~l~~~~~~ 349 (579)
+|+|+++||+++|+.....++|..+++++...++ . ..+||.++++..++.++..++.++..+
T Consensus 154 ~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 154 FFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999998777777776666555433 2 234777777887777777766666655
Q ss_pred CCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHH
Q 008070 350 SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF 429 (579)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~ 429 (579)
+.++.+.. ....+.++|+|..|.+++.+++.+..+.++..++|.|+++.+ +.......
T Consensus 234 ~~~~~~~~--------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~ 291 (462)
T PRK15034 234 DIASSRAS--------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRL 291 (462)
T ss_pred CccccccC--------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHH
Confidence 43321110 122455899999999999999999999999999999998855 33333333
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHhhhhhhhhhhh
Q 008070 430 CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV--RTPAMAVLCMACSQGSDAFSQSGL 507 (579)
Q Consensus 430 ~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
..+..+...+.++++|+++||+|++++...+.. ...+.. .......... ...+.....+...+...+......
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i--~~~i~~---~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsv 366 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFI--FMAIFS---ALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGST 366 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHH--HHHHHH---HHHHHHhccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 444567788899999999999999976554321 111111 1111111111 122222222222222222222222
Q ss_pred hh-hccccCC---------------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHH
Q 008070 508 YS-NHQDIGP---------------------RYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 508 ~~-~~~~~~~---------------------~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~ 564 (579)
+- ....++. ++.|.+.|+....+.+|+++.|.+.|...+. .++...|+...+..+++
T Consensus 367 fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~ 446 (462)
T PRK15034 367 FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVC 446 (462)
T ss_pred HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 21 1111121 2678999999999999999999999999887 67999999999998888
Q ss_pred HHHHHHhhc
Q 008070 565 TLVWNLFAT 573 (579)
Q Consensus 565 ~~~~~~~~~ 573 (579)
.++.+....
T Consensus 447 ~~~~w~~y~ 455 (462)
T PRK15034 447 VLLTWLVYG 455 (462)
T ss_pred HHHHHHHhc
Confidence 877665543
No 34
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=8.8e-28 Score=256.59 Aligned_cols=367 Identities=14% Similarity=0.125 Sum_probs=246.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc-cCHHHHHHHHHHHHhhhhchhhHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~-~~~~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
.....++.+..+++..++.+++|+++||+|||++++++.+++.++.+++.+... .+++.+++.|+++|++.+...+...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 345677888888999999999999999999999999999999999998866542 2456899999999999999999999
Q ss_pred HHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHH---HHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCC-----C
Q 008070 284 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS---PILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE-----D 355 (579)
Q Consensus 284 ~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~---~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~-----~ 355 (579)
+++.|++|+++|++++++...+..+|.+++++++ ..+....+||+.|++.++..++..+ ..++.+++|.. .
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~ 228 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESPRWLVGKGR 228 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCChHHHHHcCC
Confidence 9999999999999999999999999999999999 6666778999999996655554443 34445554421 1
Q ss_pred hhhcHHHHhhhhcCCccccc-----------------ccchhHHHHhh------chHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 356 PELRAEEKRHILGGSISKEA-----------------VSVIPWKLILS------KAPVWALIISHFCHNWGTFILLTWMP 412 (579)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~------~~~~~~~~l~~~~~~~~~~~~~~~~p 412 (579)
.+...+.............. .....++.+++ .+.++...+..+...........+.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (481)
T TIGR00879 229 VEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSP 308 (481)
T ss_pred hHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHH
Confidence 11000000000000000000 00000122222 23333333444433333445566777
Q ss_pred HHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc----chhHH
Q 008070 413 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV----RTPAM 488 (579)
Q Consensus 413 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 488 (579)
.++.+ .|++..+.++......++.+++.++.+++.||+++|+....+. .+..++++...+........ .....
T Consensus 309 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 309 TIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGA--AGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred HHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH--HHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 77766 7999988888888899999999999999999999997654332 11111111111111111111 02222
Q ss_pred HHHHHHHHhhhhhhhhhhhhhh-ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 008070 489 AVLCMACSQGSDAFSQSGLYSN-HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
......+..+......+..... .+..|++.+++++|+.+...+++.+++|.+.|.+.+..+|...|++.+++++++.++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 465 (481)
T TIGR00879 386 IVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIF 465 (481)
T ss_pred HHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHH
Confidence 2222222222222223333333 455677899999999999999999999999999999989999999988888887777
Q ss_pred HHHhhcCc
Q 008070 568 WNLFATGE 575 (579)
Q Consensus 568 ~~~~~~~~ 575 (579)
.+++.++.
T Consensus 466 ~~~~~~~~ 473 (481)
T TIGR00879 466 VYFFLPET 473 (481)
T ss_pred HheecccC
Confidence 66654443
No 35
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=5.9e-27 Score=245.62 Aligned_cols=343 Identities=16% Similarity=0.139 Sum_probs=243.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.+..++...+..+++|+++||+|||++++.+.++.+++.+++++.+ +++.+++.|++.|++.+ ..+....++
T Consensus 55 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~ 131 (408)
T PRK09874 55 WSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQ--NIWQFLILRALLGLLGG-FVPNANALI 131 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHhhh-hHHhHHHHH
Confidence 456777788888899999999999999999999999999999999888888 89999999999999865 567788899
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.+++|+++|++++++...+..+|.+++|.+++.+.+..+||+.|++.+++.++..++.++..++++++.++.+..+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 208 (408)
T PRK09874 132 ATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHM--- 208 (408)
T ss_pred HHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHH---
Confidence 99999999999999999999999999999999999989999999999888777766666666654322111110000
Q ss_pred hcCCcccccccchhHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCChh---hhhHHhHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWAL-IISHFCHNWGTFILLTWMPTYYNQVLKFNLT---ESGLFCVLPWLTMAVFAN 442 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~g~~~~~~~~~~~ig~~ 442 (579)
......+++++++.. .+..++..........+++.|..+..+.... ..+.+..+..++.+++.+
T Consensus 209 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 276 (408)
T PRK09874 209 ------------REVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAP 276 (408)
T ss_pred ------------HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 112234566665443 3333444444555667788888774332221 245555666778888899
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHH
Q 008070 443 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 522 (579)
Q Consensus 443 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 522 (579)
+.|++.||+++++.+..+. ............. .+.+...+..+..+.+.....+..........+++.+|+.
T Consensus 277 ~~g~l~dr~g~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (408)
T PRK09874 277 RLGKLGDRIGPEKILITAL-------IFSVLLLIPMSFV-QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRI 348 (408)
T ss_pred HHHHHHhccccchhHHHHH-------HHHHHHHHHHHHh-ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceee
Confidence 9999999999987654321 1111111111111 1222222222333333333333333333445677889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
+|+.+....+|..+||.+.|.+.+..||+..|.+.+++.+++.++.+...+++
T Consensus 349 ~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 349 FSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred ehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998888877766554443
No 36
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=1.4e-26 Score=242.66 Aligned_cols=336 Identities=11% Similarity=0.010 Sum_probs=239.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
.....+..+++..++++++|+++||+|||++++.+.++++++.+++++++ +++.++++|+++|++.+...+....++.
T Consensus 53 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~ 130 (413)
T PRK15403 53 APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--SMTQFLIARFIQGTSICFIATVGYVTVQ 130 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777888899999999999999999999999999999999998 8999999999999999877777788999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
|++|++++++++++...+..+|..+||++++.+.+..|||+.|++.+++.++..++.++..||+++++++....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~------ 204 (413)
T PRK15403 131 EAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSA------ 204 (413)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCCh------
Confidence 99999999999999999999999999999999998899999999998887777665555556543321110000
Q ss_pred cCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHH
Q 008070 368 GGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWI 447 (579)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l 447 (579)
......++.+++||.++...+..++.....+.+..+.|.++++.+|+++.+.++......++.+++..+.+++
T Consensus 205 -------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~ 277 (413)
T PRK15403 205 -------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARF 277 (413)
T ss_pred -------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011346778999999998888888888888888889999999889999999998888888888888888776
Q ss_pred hhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHH
Q 008070 448 ADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM-AVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLS 526 (579)
Q Consensus 448 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 526 (579)
.++..+++...... .+..++.+........ ..+.++. .+...+.+.+... ..+........-....+|++.|+.
T Consensus 278 ~~~~~~~~~~~~~~--~~~~ig~~l~~~~~~~--~~~~~~~~~~~~~l~~~G~~~-~~p~~~~~al~~~~~~~G~a~a~~ 352 (413)
T PRK15403 278 VKDPTEPRFIWRAV--PIQLVGLALLIVGNLL--WPHVWLWSVLGTSLYAFGIGL-IFPTLFRFTLFSNNLPKGTVSASL 352 (413)
T ss_pred hccCCchhHHHHHH--HHHHHHHHHHHHHHHH--ccccHHHHHHHHHHHHHHHHH-HhHHHHHHHhccCCCCCcHHHHHH
Confidence 65544443322111 1111222211111111 1222221 2222222333222 222222211111233479999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 008070 527 NTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 527 ~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~ 564 (579)
+.....+..+++.+.|++.+. +-...|...+++..+.
T Consensus 353 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 353 NMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 999999999999999999887 4455555544444433
No 37
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=1e-26 Score=241.25 Aligned_cols=349 Identities=17% Similarity=0.168 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.+...++..++.+++|+++||+|||+++..+.++.+++.+++++++ +++.+++.|++.|++.+...+...++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~ 103 (377)
T PRK11102 26 GSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQLIYMRFLHGLAAAAASVVINAL 103 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677778888889999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.+++|+++|++++++...+..+|..++|++++.+.+..+||+.|++.+++.++..++..+..+++++++++.+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 179 (377)
T PRK11102 104 MRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFH---- 179 (377)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCC----
Confidence 9999999999999999999999999999999999999899999999988887776666665555543221111000
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
.+....+++++++++.++...+..++...+.+.+..+.|.++.+.+|+++.+.+++.....++.+++.++.+
T Consensus 180 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g 251 (377)
T PRK11102 180 --------LRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINS 251 (377)
T ss_pred --------hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000113456678888888877777777777777777888888888899999999999999999999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 525 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 525 (579)
++.||+++|+....+... ..+ ........... ....+...+...+..+..............+..|+.+|++.++
T Consensus 252 ~l~~r~g~~~~~~~~~~~--~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (377)
T PRK11102 252 RFVRRVGALNMLRFGLWI--QFI--MGIWLVVSALL-DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSL 326 (377)
T ss_pred HHHHHhCHHHHHHHHHHH--HHH--HHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHH
Confidence 999999999765433211 000 01111111111 1122222222222222222222222333344567889999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 526 SNTAGV-LAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 526 ~~~~~~-lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
.+.... ++..+++.+.+. .. .++...+...+++.+++.++.++..+++
T Consensus 327 ~~~~~~~~g~~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (377)
T PRK11102 327 AGTLRFGIGAIVGALLSLA-PF-TSAWPMVWSMAFCSILSILFYLYASRPK 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHhc-cC-CChHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 877643 556666655432 22 2333344444555555555555444433
No 38
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=4.6e-28 Score=239.27 Aligned_cols=347 Identities=18% Similarity=0.264 Sum_probs=270.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhcc-CHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI-GLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~-~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
.++.....+...+.+++.|.+.||+|.|++..++.++..+-.+..+++.++ +++++++++++.|++.+ .+......++
T Consensus 52 ~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s 130 (417)
T COG2223 52 GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNAS 130 (417)
T ss_pred HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehccccccc
Confidence 455666666777778999999999999999999999999999999988632 34699999999999965 6788889999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC---cchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG---WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g---wr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
.|+|+|++|.++|+.. ..++|..+..+++..++...+ |+.+..+..+..++..++.++...+.|+.....++...
T Consensus 131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~- 208 (417)
T COG2223 131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP- 208 (417)
T ss_pred ccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-
Confidence 9999999999999999 999999999999999999888 99999999998888888888888777653222111110
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
.+++.+++++..|.+.+.++..+.++.++..++|.|+++++|.++.++|.+.....+.+.+.++++
T Consensus 209 --------------~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~G 274 (417)
T COG2223 209 --------------AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLG 274 (417)
T ss_pred --------------hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhcc
Confidence 236668899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 445 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 445 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
|+++||+|.+|...... ....++..+....................++..+...+......+.......+++.|.+.|
T Consensus 275 G~LsDR~Gg~rv~~~~f--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G 352 (417)
T COG2223 275 GWLSDRIGGRRVTLAVF--VGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTG 352 (417)
T ss_pred chhhhhccchhHHHHHH--HHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHH
Confidence 99999999997654321 1111111111111100111122333333333333344444444455555556788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
+...++.+|++.-|...|...+..| +...|++...+.+++.++......+
T Consensus 353 ~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 353 IVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999866 9999999999988888866555444
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=3.2e-27 Score=248.36 Aligned_cols=344 Identities=16% Similarity=0.073 Sum_probs=243.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHh---hhccCHHHHHHHHHHHHhhhhchhhH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---AARIGLPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~---a~~~~~~~ll~~r~l~Gig~g~~~~~ 281 (579)
...+.++.....+...+++++.|+++||+|||++++++.++.+++.++.++ ....+++.+++.|++.|++.+...++
T Consensus 51 ~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 130 (417)
T PRK10489 51 TLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTA 130 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778888888889999999999999999999888888777665542 11226788999999999999988899
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHH
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE 361 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~ 361 (579)
..+++.+++|+++|+++.++.....++|..+||.+++.+.+..+|+|.|++.++..++..++.+. .|+.+++..+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~ 209 (417)
T PRK10489 131 LLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPALPPPPQPREHP 209 (417)
T ss_pred HhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCCCCCCcccccc
Confidence 99999999999999999999999999999999999999999889999999877776665544443 34332211110000
Q ss_pred HHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHH
Q 008070 362 EKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFA 441 (579)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~ 441 (579)
.+.....++.++++|.++...+..++... ...+..++|.|+++.+|.++.+.+++.+...++.+++.
T Consensus 210 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 276 (417)
T PRK10489 210 ------------LRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA 276 (417)
T ss_pred ------------hHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH
Confidence 00011235567788887766555544332 45667789999998889999999999999999999999
Q ss_pred HHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchh
Q 008070 442 NMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAG 520 (579)
Q Consensus 442 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 520 (579)
++.+++.||.++++.+..+ .......+.+ ....+..+...++..+.+.......+.... ..+..|++.||
T Consensus 277 ~~~~~l~~~~~~~~~l~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g 347 (417)
T PRK10489 277 LTSGWLAHSARPGLLMLLS-------TLGSFLAVGL--FGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLG 347 (417)
T ss_pred HHHHHhhhccCcchHHHHH-------HHHHHHHHHH--HHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHH
Confidence 9999999986655433221 1111111111 111223333222322222222333333333 34456778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 521 VLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 521 ~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+++|+++....+|..+||.+.|.+.+..|+...+...+++.++..++....
T Consensus 348 ~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 348 RINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998888887776655544444333
No 40
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=9.2e-27 Score=243.47 Aligned_cols=337 Identities=17% Similarity=0.153 Sum_probs=235.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhh---hc---cCHHHHHHHHHHHHhhhhch
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA---AR---IGLPFLLIMRAFMGIGEGVA 278 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a---~~---~~~~~ll~~r~l~Gig~g~~ 278 (579)
...+.++.++.++...+.+++.|+++||+|||++++.+.++++++.+++.++ ++ .+++.+++.|+++|++.+..
T Consensus 50 ~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 129 (399)
T PRK05122 50 AFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLA 129 (399)
T ss_pred HHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhh
Confidence 4557888888889999999999999999999999999999888876665543 21 13567899999999999999
Q ss_pred hhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 279 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 279 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
.+...+++.+++|+++|++++++...+..+|.++|+.+++.+.+.+||++.+++.+++.++..+.. ...++.++++
T Consensus 130 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--- 205 (399)
T PRK05122 130 GTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVPPVK--- 205 (399)
T ss_pred cchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCCCCC---
Confidence 999999999999999999999999999999999999999999999999999887666544333222 1112111110
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMA 438 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ 438 (579)
.+ + .++++.++ .++.......+..+.......+++.|+.+ .|+ ...++......++.+
T Consensus 206 ~~--~---------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 263 (399)
T PRK05122 206 GE--R---------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFV 263 (399)
T ss_pred cc--c---------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHH
Confidence 00 0 01222222 12222223333445556667788888876 465 345666677788889
Q ss_pred HHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 439 VFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 439 ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
++.++.|++.||+++++....+. .+.......... ..+.+...+..++.+.+.....+.......+..++++
T Consensus 264 ~~~~~~g~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 335 (399)
T PRK05122 264 GARLLFGNLINRLGGLRVAIVSL-------LVEILGLLLLWL-APSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN 335 (399)
T ss_pred HHHHHHHHHHHHhccHHHHHHHH-------HHHHHHHHHHHH-hccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH
Confidence 99999999999999886543221 111111111111 1222222233333333333333333333455678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
+|++.|+++....+|..+++++.|.+.+..||+..+++.+++.+++.++...+.+++
T Consensus 336 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 336 RGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999988888877766665543
No 41
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=7.7e-27 Score=246.59 Aligned_cols=315 Identities=15% Similarity=0.183 Sum_probs=210.8
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHH--------HHHHHHHHHHhhhhchhhHHHHH
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~--------~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..++...+++++.|+++||+|||++++.+.+++.++.+++++++ +++ .+++.|+++|++.+...+....+
T Consensus 64 ~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~ 141 (434)
T PRK15075 64 AGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVY 141 (434)
T ss_pred HHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Confidence 33455567889999999999999999999999999999999998 665 46899999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE 357 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~--------~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~ 357 (579)
++|++|+++|++++++...+..+|..+++.+++.+. +.+|||++|++..+...+ . +. .++.+++.++
T Consensus 142 ~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~---~~-~~~~~~e~~~ 216 (434)
T PRK15075 142 LAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-I---FL-IRRSLEETEE 216 (434)
T ss_pred HHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-H---HH-HHHhcCCCHH
Confidence 999999999999999999998888888888877763 468999999875433211 1 11 1111222111
Q ss_pred hcHHHHhhhhcCCcccccccchhHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHH
Q 008070 358 LRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWAL-IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLT 436 (579)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~ 436 (579)
...++++ ......++...++++.+.. ++..++.....+....|.|.|+++.+|++..+.+++..+..++
T Consensus 217 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~ 286 (434)
T PRK15075 217 FLARKHR----------PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVS 286 (434)
T ss_pred HHHhhhc----------cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 0000000 0001123344455555443 3334445556677888999999988899999999888888899
Q ss_pred HHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccC
Q 008070 437 MAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIG 515 (579)
Q Consensus 437 ~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (579)
.+++.++.|+++||+++|+....+. ....+.....+............ ......+.+.............+..|
T Consensus 287 ~~~~~~~~g~l~Dr~g~r~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p 361 (434)
T PRK15075 287 NFIWLPIGGALSDRIGRRPVLIAFT-----VLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMP 361 (434)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHH-----HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC
Confidence 9999999999999999987544321 11111111111111111222111 11122222222222222233455678
Q ss_pred CCchhHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCh
Q 008070 516 PRYAGVLLGLSNTAGV-LAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~-lg~~ig~~l~g~l~~~~g~ 550 (579)
++.|+++.|+.+.+.. +++.++|.+.|++.|..|+
T Consensus 362 ~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 362 AEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred CCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 8999999999755555 4688899999999998775
No 42
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=2.4e-27 Score=246.73 Aligned_cols=331 Identities=18% Similarity=0.197 Sum_probs=232.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHH--------HHHHHHHHHHhhhhchhhHH
Q 008070 211 LCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 211 l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~--------~ll~~r~l~Gig~g~~~~~~ 282 (579)
.....++...++.++.|+++||+|||++++++.++..++.+++++++ +++ .+++.|+++|++.+...+..
T Consensus 40 ~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 117 (394)
T TIGR00883 40 TFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGA 117 (394)
T ss_pred HHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC--ChhhhHHHHHHHHHHHHHHHHhhcccccccc
Confidence 34455566678889999999999999999999999999999999998 543 47899999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCcchHHHHhhHHHHHHHHHHHhhhcCCCCC
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE 354 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~--------~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~ 354 (579)
.+++.|++++++|++..++...+..+|.+++++++..+. +.++||+.|++.+++.++..++ ....+|+++.
T Consensus 118 ~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 196 (394)
T TIGR00883 118 ALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVF 196 (394)
T ss_pred HHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhH
Confidence 999999999999999999999999999999999887654 3578999998877665544332 2223332211
Q ss_pred ChhhcHHHHhhhhcCCcccccccchhHHHHhhchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHH
Q 008070 355 DPELRAEEKRHILGGSISKEAVSVIPWKLILSKAP--VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVL 432 (579)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~ 432 (579)
.+ ++++ ++....+.++.++++. ++...+..++.....+....++|.|+++.+|.+..+.+.+...
T Consensus 197 ~~---~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 263 (394)
T TIGR00883 197 EK---AQEK----------HKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLML 263 (394)
T ss_pred HH---HHhc----------cccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHH
Confidence 11 0000 0011123455666655 6777777777777778888899999988789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHhhhhhhhhhhhhhhc
Q 008070 433 PWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVL-CMACSQGSDAFSQSGLYSNH 511 (579)
Q Consensus 433 ~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 511 (579)
..++.+++.++.|++.||+++|+...... ....+...............+.... ....+.+.............
T Consensus 264 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 338 (394)
T TIGR00883 264 SLILFFITIPLSGALSDRIGRRPVLIIFT-----VLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLP 338 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHH-----HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999987543211 1111111011111111122222222 22333333333333444455
Q ss_pred cccCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHH
Q 008070 512 QDIGPRYAGVLLGLS-NTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYI 562 (579)
Q Consensus 512 ~~~~~~~~g~~~g~~-~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~~ 562 (579)
+..|++.|+++.|+. +....+|..++|.+.|.+.++.| |...++...++.+
T Consensus 339 ~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 339 ELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 567778899999985 45566788899999999999877 7766666555443
No 43
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=6e-28 Score=247.43 Aligned_cols=316 Identities=24% Similarity=0.382 Sum_probs=233.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
+.++.+...+...+..++.|+++||+|||++++++.++.+++.++..+++ +++.+++.|++.|++.+...+...+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 111 (352)
T PF07690_consen 34 IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS--NFWLLLIARFLLGIGSGFFSPASNALIA 111 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh--hHHHHhhhcccccccccccccccccccc
Confidence 56677778888899999999999999999999999999999977766766 7889999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
|++|+++|++++++...+..+|.+++|++++++.+.++||+.|++.+++.++..++...+.++++++....++.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--- 188 (352)
T PF07690_consen 112 DWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE--- 188 (352)
T ss_dssp HCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---
T ss_pred ccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc---
Confidence 99999999999999999999999999999999998899999999999998887765444444333322221111110
Q ss_pred cCCcccccccch-hHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-hhhhhHHhHHHHHHHHHHHHHHH
Q 008070 368 GGSISKEAVSVI-PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN-LTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 368 ~~~~~~~~~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s-~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
.+.+.+.. .++.+++++.+|.+.+..++..+.......++|.|+.+.+|++ ..+.+.+..+..+.++++.++.+
T Consensus 189 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (352)
T PF07690_consen 189 ----SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAG 264 (352)
T ss_dssp ------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111112 2666778887776666666666677888999999978879999 88999999999999999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV-RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
++.||+++++... ..........+.+...... +..+.....++.+.+.....+.......+..|++++|++.|
T Consensus 265 ~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 338 (352)
T PF07690_consen 265 RLSDRFGRRRRLL------IAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFG 338 (352)
T ss_dssp HHHHHTTCHHHHH------HHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHH
T ss_pred HHHHHcCcHHHHH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999998865332 1122222222222222222 22333334444444443344444444556677799999999
Q ss_pred HHHHHHHHHHHHHH
Q 008070 525 LSNTAGVLAGVFGT 538 (579)
Q Consensus 525 ~~~~~~~lg~~ig~ 538 (579)
+.+...+++..++|
T Consensus 339 ~~~~~~~~~~~igP 352 (352)
T PF07690_consen 339 LFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC
Confidence 99999999999987
No 44
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=1e-26 Score=249.13 Aligned_cols=362 Identities=15% Similarity=0.149 Sum_probs=231.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhh---------hc-cCHHHHHHHHHHHHhhh
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA---------AR-IGLPFLLIMRAFMGIGE 275 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a---------~~-~~~~~ll~~r~l~Gig~ 275 (579)
....++.+..+++..++++++|+++||+|||++++++.+++.++.++++++ ++ ..++.++++|+++|++.
T Consensus 55 ~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~ 134 (479)
T PRK10077 55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGV 134 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhH
Confidence 455778888899999999999999999999999999999999998887763 11 12567889999999999
Q ss_pred hchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCcchHHHHhhHHHHHHHHHHHhh
Q 008070 276 GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 276 g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~--------~~~gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
|...+...++++|++|+++|++++++.+.+..+|.++++++++.+. +.+|||+.|++.+++.++..+. .++
T Consensus 135 g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~ 213 (479)
T PRK10077 135 GLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYF 213 (479)
T ss_pred hHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHc
Confidence 9999999999999999999999999999999999999988876553 3579999999887777665544 445
Q ss_pred hcCCCCCChhh-cHHHHh---hhhcCCcccccccchhHHHHhh-----chHHHHH---------HHHHHHHHHHHHHHHH
Q 008070 348 AYSSPKEDPEL-RAEEKR---HILGGSISKEAVSVIPWKLILS-----KAPVWAL---------IISHFCHNWGTFILLT 409 (579)
Q Consensus 348 ~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~---------~l~~~~~~~~~~~~~~ 409 (579)
.||+|+..... +.++.. ........ ........+..++ .+.++.. ....+....+.+....
T Consensus 214 l~~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (479)
T PRK10077 214 VPETPRYLMSRGKQEQAEGILRKIMGNTL-ATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLY 292 (479)
T ss_pred CCCCcHHHHHcCCHHHHHHHHHHHcCChh-HHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHH
Confidence 66665321000 011100 00000000 0000001111111 0111100 1111111222334445
Q ss_pred HHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 008070 410 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA 489 (579)
Q Consensus 410 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (579)
+.|.+..+ .|++.....+.....++..+++.++.+++.||+|+|+++..+. ....++.++... .........+..
T Consensus 293 ~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~--~~~~v~~~~l~~--~~~~~~~~~~~~ 367 (479)
T PRK10077 293 YAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGA--LGMAIGMFSLGT--AFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhH--HHHHHHHHHHHH--HHhcCcccHHHH
Confidence 66777766 7888877777777788889999999999999999997655432 111121111111 111111111222
Q ss_pred HHHHHHHhhhhhhhhhh-hhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH------hcCChHHHHHHHHHHHH
Q 008070 490 VLCMACSQGSDAFSQSG-LYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL------QRGSWDDVFKVAVVLYI 562 (579)
Q Consensus 490 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~------~~~g~~~~~~~~~~~~~ 562 (579)
......+.+......+. .....+..|++.|++++|+.+....++.++++.+.+.+. +..++...|++.+++.+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 22222222222222223 333455567789999999999999999999977776554 56778888888887777
Q ss_pred HHHHHHHHhhcC
Q 008070 563 IGTLVWNLFATG 574 (579)
Q Consensus 563 l~~~~~~~~~~~ 574 (579)
+++++.+++.++
T Consensus 448 ~~~~~~~~~~~e 459 (479)
T PRK10077 448 LAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHhcccc
Confidence 776665555443
No 45
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=2.3e-26 Score=239.82 Aligned_cols=335 Identities=15% Similarity=0.185 Sum_probs=230.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH---hhh---ccCHHHHHHHHHHHHhhhhch
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP---VAA---RIGLPFLLIMRAFMGIGEGVA 278 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~---~a~---~~~~~~ll~~r~l~Gig~g~~ 278 (579)
.+.+.++.+..++...+.++++|+++||+|||++++.+.++..++.+... +.+ ..+++.+++.|+++|++.+..
T Consensus 50 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 129 (392)
T PRK12382 50 NTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQL 129 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 56778889999999999999999999999999999999888776654332 211 116788999999999999998
Q ss_pred hhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 279 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 279 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
.+...+++.+++|+|+|++++++.+.+..+|.++||++++++.+.+||++.+.+..++.++.... ....|+.++++++
T Consensus 130 ~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 207 (392)
T PRK12382 130 LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-NGTVRKVPAHAGE- 207 (392)
T ss_pred HHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-HHhccCCCCCccc-
Confidence 99999999999999999999999999999999999999999999999998877655443332221 1111221111000
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMA 438 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ 438 (579)
+ .+.++.++ .++...+..++..........+.|.|+++ .+++. .++......++.+
T Consensus 208 ----~---------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 263 (392)
T PRK12382 208 ----R---------------PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFV 263 (392)
T ss_pred ----C---------------chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHH
Confidence 0 01111111 11222222233344555667788888877 46553 4556666777888
Q ss_pred HHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 439 VFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 439 ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
+++++.|++.||+++++....+. .+..++ ..+.... .+.........+.+.+.....+.......+..++++
T Consensus 264 ~~~~~~g~l~~r~g~~~~~~~~~--~~~~~~-----~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 335 (392)
T PRK12382 264 LMRVLFGWMPDRFGGVKVAIVSL--LVETVG-----LLLLWLA-PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV 335 (392)
T ss_pred HHHHHHHHHHHhcCCCeehHHHH--HHHHHH-----HHHHHHc-ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH
Confidence 99999999999999987755332 111111 1111111 222222222223333222222333333456678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
+|++.|+.+....+|..++|.+.|.+.++.||+..|.+.+++.+++.++.+...+
T Consensus 336 ~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 336 RGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999988888777665543
No 46
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=1.7e-26 Score=246.80 Aligned_cols=333 Identities=14% Similarity=0.141 Sum_probs=241.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcc
Q 008070 210 LLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 289 (579)
Q Consensus 210 ~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 289 (579)
++.....+...++.+++|+++||+|||++++.+.++.+++.+++++++ +++.+++.|+++|++.+...+...+++.++
T Consensus 49 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~ 126 (471)
T PRK10504 49 MVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKI 126 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 344555566677789999999999999999999999999999988888 899999999999999999999999999999
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh-----
Q 008070 290 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR----- 364 (579)
Q Consensus 290 ~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~----- 364 (579)
+|+++|++++++.....++|..+||.+++.+.+..|||+.|++...+..+..++.....|+.+.+..+.+.....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 206 (471)
T PRK10504 127 VPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVG 206 (471)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988777666666655555443222111100000
Q ss_pred ------hhhcCC--------------------------cccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 365 ------HILGGS--------------------------ISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 412 (579)
Q Consensus 365 ------~~~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p 412 (579)
...+.. +.....+..+. ++++||.++..++..++..........+.|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 285 (471)
T PRK10504 207 MATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTP 285 (471)
T ss_pred HHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00111122233 378899999888888888888777778899
Q ss_pred HHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHH
Q 008070 413 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM-AVL 491 (579)
Q Consensus 413 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 491 (579)
.|++..+|.++.+.+++.....++.+++.++.+++.||+++|+.+..+. ....+....+.........+. ...
T Consensus 286 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
T PRK10504 286 VFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT------LGLALVSLLFMLVALLGWYYLLPFV 359 (471)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH------HHHHHHHHHHHhccccccHHHHHHH
Confidence 9998878999999999998888888888899999999999987644321 111111111111111122222 222
Q ss_pred HHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 492 CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
.++.+.+.............+.++++.+|.++|+.++...+|..+|+.+.|.+.+..|+.
T Consensus 360 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 360 LFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 222223332233333333445678899999999999999999999999999999887664
No 47
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=2.6e-27 Score=254.20 Aligned_cols=330 Identities=18% Similarity=0.199 Sum_probs=247.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
+.++.....++..++.++.|+++||+|||++++++.++..++.+++++++ +++.+++.|+++|++.+...+...+++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~ 116 (485)
T TIGR00711 39 VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLL 116 (485)
T ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 34566667777888889999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH----
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK---- 363 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~---- 363 (579)
|++|+++|+++++++..+..+|..+||.+++++.++++||+.|++.+++.++..++.++..++++++..+..+...
T Consensus 117 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~ 196 (485)
T TIGR00711 117 NIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLL 196 (485)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999998888777766666665554332211100000
Q ss_pred ---------hhhhcCC--------------------------cccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 008070 364 ---------RHILGGS--------------------------ISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 408 (579)
Q Consensus 364 ---------~~~~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 408 (579)
....... +.+.+.+..+ .++++++.++...+..++..+..+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (485)
T TIGR00711 197 SVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSF 275 (485)
T ss_pred HHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000111112 246788888888888888888888888
Q ss_pred HHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHH--hhccch-
Q 008070 409 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ--LSHVRT- 485 (579)
Q Consensus 409 ~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 485 (579)
.++|.|+++.+|+++.+++++.....++.+++.++.|++.||+++|+....+ ..+...+..+.. ......
T Consensus 276 ~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~ 348 (485)
T TIGR00711 276 YLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIG-------LILYAVGFYWRAFTFTPDTPF 348 (485)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHH-------HHHHHHHHHHHhccCCCCCCH
Confidence 9999999998999999999999999999999999999999999998653322 111111111111 111222
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 486 PAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
........+.+.+......+......+..+++++|++.|+.++...+|+.+|+.+.|.+.++
T Consensus 349 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 349 LAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333334443333444444455667889999999999999999999999999999874
No 48
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=4.5e-26 Score=243.56 Aligned_cols=335 Identities=14% Similarity=0.174 Sum_probs=238.3
Q ss_pred hhhhhhhhhhhhc-----CCcHH-HHHHHHHHHHHHHHHHhhh-ccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcC
Q 008070 221 MDRIVGGIWADKF-----GGKPV-LGFGVIWWSVATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS 293 (579)
Q Consensus 221 l~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~ll~~~a~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 293 (579)
+..+++|+++||+ |||+. ++++.++.+++.+++++.+ ..+++.+.+.+++.|++.+...++..+++.|++|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4558999999999 99885 6688887878877777753 125778899999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCcc
Q 008070 294 ERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSIS 372 (579)
Q Consensus 294 ~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (579)
+|+++.++...+..+|.++++.++.++.+ ..|||..|++.+++.++..+..++ .+|+++..++.+..
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~~----------- 207 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPVPKTL----------- 207 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccch-----------
Confidence 99999999999999999999999999998 579999999998877766555444 45433211100000
Q ss_pred cccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhH-HHHHHHHHHHHHHHHHhhhh
Q 008070 373 KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCV-LPWLTMAVFANMGGWIADTL 451 (579)
Q Consensus 373 ~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~-~~~~~~~ig~~~~g~l~dr~ 451 (579)
++....+++++++++..|...+..++..........+.+.|+.+.+|++..+.+++.. ...++.+++.++.|++.||+
T Consensus 208 -~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~ 286 (491)
T PRK11010 208 -EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL 286 (491)
T ss_pred -hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001134666777887777766666666666677778888887778999999999874 55578999999999999999
Q ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH-HhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHH
Q 008070 452 VSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMAC-SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAG 530 (579)
Q Consensus 452 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 530 (579)
++++...... ....+.. ..+...... ....+.......+ ....+...........+..+++..++.+|+.+...
T Consensus 287 g~~~~l~i~~--~l~~l~~--l~~~~l~~~-~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~ 361 (491)
T PRK11010 287 SLFRALMIFG--ILQGVSN--AGYWLLSIT-DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALS 361 (491)
T ss_pred hHHHHHHHHH--HHHHHHH--HHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 9886433211 1111111 111111111 1222222211222 11111111222223344467778899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 531 VLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 531 ~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.+|..+++++.|.+.|..||...|.+.+++.+++.++....++
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999888877766653
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=5.1e-27 Score=249.02 Aligned_cols=337 Identities=14% Similarity=0.167 Sum_probs=236.3
Q ss_pred hhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHH-HHHHHHhhhhchhhHHHHHHhcccCcCchhHH
Q 008070 220 NMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLI-MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRS 298 (579)
Q Consensus 220 ~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~-~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~ 298 (579)
.++.+++|+++||+|||++++.+.++.+++.+++++++ +++.+++ .|++.|++.+...+...+++.++++ ++|+++
T Consensus 68 ~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a 144 (455)
T TIGR00892 68 YAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLA 144 (455)
T ss_pred HHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHH
Confidence 34448899999999999999999999999999999988 7777764 5799999999877778888999995 899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcH-HHHhhhhcCCcc-----
Q 008070 299 LAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA-EEKRHILGGSIS----- 372 (579)
Q Consensus 299 ~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----- 372 (579)
+++...+..+|..++|++++.+.+.+|||++|++.+++.++..+..++..++.+.+.....+ ++.........+
T Consensus 145 ~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (455)
T TIGR00892 145 NGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKS 224 (455)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccc
Confidence 99999999999999999999999999999999999988776655544443322211000000 000000000000
Q ss_pred --cccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh
Q 008070 373 --KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT 450 (579)
Q Consensus 373 --~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr 450 (579)
++.....++ .++++|.++...+..++...+.+....++|.|+++ .|++..+++++.++.+++.++++++.|++.||
T Consensus 225 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~ 302 (455)
T TIGR00892 225 TAEKINRFLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGL 302 (455)
T ss_pred hhhhhhhhcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000001112 46788999988888888888888888899999987 79999999999999999999999999999997
Q ss_pred hh--ccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHH
Q 008070 451 LV--SKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNT 528 (579)
Q Consensus 451 ~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 528 (579)
.. +++.... ..+..+......+... ..+.+.+.+..+..+.+.............+.++++++++++|+++.
T Consensus 303 ~~~~~~~~~~~-----~~~~~~~~l~~ll~~~-~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 376 (455)
T TIGR00892 303 KWIRPHVQYLF-----SFALLFNGLTHLLCAL-AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTI 376 (455)
T ss_pred cccCHHHHHHH-----HHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHH
Confidence 42 2322111 1111111111111111 12222333333334433333333333344555788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHH
Q 008070 529 AGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 529 ~~~lg~~ig~~l~g~l~~~~-g~~~~~~~~~~~~~l~~~~ 567 (579)
...+|.++||.++|.+.+.. +|+..|++.+++.+++.+.
T Consensus 377 ~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 377 VECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 99999999999999999975 5999998888877766553
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=4.3e-26 Score=236.87 Aligned_cols=332 Identities=15% Similarity=0.057 Sum_probs=237.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...++++.+...++..+++++.|+++||+|||+++..+.++.+++.+++++++ +++.+++.|+++|++.+...+...+
T Consensus 40 ~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~ 117 (381)
T PRK03633 40 TWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV--GFWSWLAWRFVAGIGCAMIWVVVES 117 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888999999999999999999999999999999999999999998 8999999999999999998898888
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
.+.+..++++|+++++++..+.++|..+||.+++.+.+...|... +..+.+......+ ++. +.+++..++ +
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~~-~~~~~~~~~-~----- 188 (381)
T PRK03633 118 ALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLP-WVTGLVLAAILPL-LFT-RILNQQAEN-H----- 188 (381)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHH-HHHHHHHHHHHHH-HHh-cccCCCCCC-C-----
Confidence 888999999999999999999999999999999998775433333 3322222221211 121 111111000 0
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
+..++++.+++|.++......+...........++|.|+++ .|.++.+.+.+.+...++.++++++.
T Consensus 189 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~ 255 (381)
T PRK03633 189 ------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPI 255 (381)
T ss_pred ------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 00124456778887765554555555556667789999987 69999999999999899999999999
Q ss_pred HHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 445 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 445 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
|++.||+++|+.+..+. ....++ ..... . . .........++.+.....+.......+..++++++.+.+
T Consensus 256 g~l~dr~~~~~~l~~~~--~~~~~~-----~~~~~-~-~--~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 324 (381)
T PRK03633 256 GRLADRFGRLLVLRVQV--FVVILG-----SIAML-S-Q--AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQ 324 (381)
T ss_pred HHHHHHcCcHHHHHHHH--HHHHHH-----HHHHh-h-h--HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHH
Confidence 99999999986544321 111111 11111 1 1 111112222222222233333333455566777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
..+...++|.++||.+.|++.|+.|+...|.+.+++.++..++.+..
T Consensus 325 ~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 325 ALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 88888999999999999999999999999999888887666555444
No 51
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=3.9e-26 Score=238.35 Aligned_cols=340 Identities=14% Similarity=0.101 Sum_probs=236.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...++++.....+...+.+++.|+++||+|||++++++.++.+++.+++++.+ +++.+++.|+++|++.+...++..+
T Consensus 45 ~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~ 122 (400)
T PRK11646 45 AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH--EPWLLWLSCILSGLGGTLFDPPRTA 122 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666677777789999999999999999999999999999999988 8999999999999999988999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
++.+++|+++|++++++......+|..+||++++++. .++||+.|++.+++.++..++..+..|+.++++ . .++
T Consensus 123 ~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-~-~~~--- 196 (400)
T PRK11646 123 LVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLST-V-RTP--- 196 (400)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccccc-c-chh---
Confidence 9999999999999999999999999999999999998 689999999988777666555444444321110 0 000
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
....++.++++|.++...+..+...........++|.|+++. +.++.+.+++.+...++..++....
T Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~ 263 (400)
T PRK11646 197 ------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPI 263 (400)
T ss_pred ------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHH
Confidence 012356678888887766655555444444566889999885 4477888888877777666555555
Q ss_pred HHHhhh-hhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHH
Q 008070 445 GWIADT-LVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 522 (579)
Q Consensus 445 g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 522 (579)
+++.|| ++.++... .+..+......+... .+..+.. +.....+.+.....+.......+..|++++|++
T Consensus 264 ~~~~~~r~~~~~~~~-------~~~~~~~~~~~~l~~--~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~ 334 (400)
T PRK11646 264 ARWSEKRFRLEHRLM-------AGLLIMSLSMFPIGM--VSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY 334 (400)
T ss_pred HHHHHHhcchhHHHH-------HHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhh
Confidence 555554 44443221 111111111111111 1222222 222222222222223333334455788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC---C-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRG---S-WDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~---g-~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
+|+.+....+|..+||.+.|.+.|.. + ....++..+++.+++.+......++
T Consensus 335 ~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (400)
T PRK11646 335 MGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYWQFSQ 390 (400)
T ss_pred hhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999974 2 3556666666666665555443443
No 52
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=9.5e-26 Score=235.97 Aligned_cols=325 Identities=14% Similarity=0.121 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.++..+...++.+++|+++||+|||++++.+.++..++.+++++++ +++.+++.|+++|++.+...+...++
T Consensus 41 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~ 118 (401)
T PRK11043 41 SAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--SAAQLLVLRFVQAVGVCSAAVIWQAL 118 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3567777888888889999999999999999999999999999999999988 89999999999999988888888899
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.|+++++++++..+.......+|..++|.+++++.+.+|||+.|++.+++.++..++.++..++.++++ + ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~---- 191 (401)
T PRK11043 119 VIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKARK-Q--SQ---- 191 (401)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCccc-c--ch----
Confidence 9999999999999999999999999999999999999999999999988887776665554433322111 0 00
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
...+++++++++.++...+...+.....+.+..+.|.++++ +|+++.+.++......++.+++.++.+
T Consensus 192 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~ 259 (401)
T PRK11043 192 -----------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCR 259 (401)
T ss_pred -----------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01245667888888776666666666667777888988876 799999999988888888999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
++.||+++++...... ....+....+...........+.... ....+.+. +...+.......+..|+++|++.|
T Consensus 260 ~l~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g 334 (401)
T PRK11043 260 AALQKWGGEQLLPWLL----VLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAAN-GAIYPIVVAQALRPFPQATGKAAA 334 (401)
T ss_pred HHHHHcCHHHHHHHHH----HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhCcccChHHHH
Confidence 9999999886543221 11111111111111111222222222 22233333 333333333332334678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKV 556 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~ 556 (579)
+.+.....++.+++.+.|.+.+.......+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 366 (401)
T PRK11043 335 LQNTLQLGLCFLASLLVSALISTPLLTTGSVM 366 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCChhHHHHHH
Confidence 99999999999999999999886555544433
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=3.1e-26 Score=238.51 Aligned_cols=341 Identities=12% Similarity=0.024 Sum_probs=240.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
+.+.++.....+...+..+++|+++||+|||++++++.++++++.+++++.. +. ++.|+++|++.+...|+..++
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~--~~---~~~r~l~G~~~a~~~pa~~a~ 112 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI--HP---LLAYGLVGIGAAAYSPAKYGI 112 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH--HH---HHHHHHHHHHHHHHHHHHHHH
Confidence 4567777788888889999999999999999999999999999988887776 43 788999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.|++|+++|++++++......+|.++||.+++++.+. .|+..+.+.+.+.++..+ ..+..|+.+.+.++.+.+....
T Consensus 113 i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 190 (393)
T PRK11195 113 LTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL-FNLFIPRLGARRPGQSWNPIAL 190 (393)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHhcCCCCcccccccCCCHHHH
Confidence 99999999999999999999999999999999999885 477777766655443333 3344454432211110000000
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
. ......++.++++|.+....+..++...........+|.|+++.+|.++.+.|++.....++.+++.++.+
T Consensus 191 ~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~ 262 (393)
T PRK11195 191 L--------RDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAA 262 (393)
T ss_pred H--------HHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00012245677888877665555555555566667778888888999999999999999999999999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH-HHHhhhhhhhhhhhhhhccccCCC-c-hhHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCM-ACSQGSDAFSQSGLYSNHQDIGPR-Y-AGVL 522 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~ 522 (579)
++.||.++++....+. ..+. ..... ...+..+...... ..+.+..... +......++.+|+ . +|++
T Consensus 263 ~l~~~~~~~~~~~~g~-----~~~~---~~~~~--~~~~~~~~~~~~~~~~G~~~g~~~-~~~~~~~q~~~~~~~~~g~~ 331 (393)
T PRK11195 263 RLVTLETVLRVLPAGI-----LMGL---VVLLM--ALQHSLLPAYPLLILIGALGGFFV-VPMNALLQHRGHVLVGAGHS 331 (393)
T ss_pred HHhcCCcccchHHHHH-----HHHH---HHHHH--HHHhHHHHHHHHHHHHHHhhhhhh-hhHHHHHHhhCcccccchhH
Confidence 9999988776443221 1111 11111 1122233232333 3333333333 3333433445554 3 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.++.+...+++..++..+.+.+ +..|.+..+.+.+...+++..+.+.++.
T Consensus 332 ~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 332 IAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred HHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999966 5678888888877777777666665544
No 54
>TIGR00898 2A0119 cation transport protein.
Probab=99.96 E-value=4.8e-26 Score=245.65 Aligned_cols=348 Identities=14% Similarity=0.071 Sum_probs=237.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
.+...++.++.+++..++.++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+...+
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~ 203 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFRLLVGMGIGGIWVQAVV 203 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHhhccchHHHHHH
Confidence 67788999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCC-----hhhc
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKED-----PELR 359 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~-----~~~~ 359 (579)
++.|++|+++|+++.++...+..+|.+++++++..+.+ ||+.|++.+++.++..+.. ++.||+|+.. .+..
T Consensus 204 ~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~a 279 (505)
T TIGR00898 204 LNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESPRWLISQGRIEEA 279 (505)
T ss_pred HhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHHH
Confidence 99999999999999999999999999999999877654 9999999988877766555 4566665311 0000
Q ss_pred HHHHhhhh--c-------------CCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChh
Q 008070 360 AEEKRHIL--G-------------GSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT 424 (579)
Q Consensus 360 ~~~~~~~~--~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 424 (579)
.+...... . .....+......+++++++|.++...+...+..+........++.+..+ ++.+..
T Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 358 (505)
T TIGR00898 280 LKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNIY 358 (505)
T ss_pred HHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCChH
Confidence 00000000 0 0000001112467788889988877766655554444333334444433 455433
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhh
Q 008070 425 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQ 504 (579)
Q Consensus 425 ~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
......++..+++.++.+++.||+|||+.+.... .+......+.........+.......++.+......
T Consensus 359 ---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (505)
T TIGR00898 359 ---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASL-------LLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAF 428 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH-------HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Confidence 3334556778888999999999999986543221 111111111111111211222222223322222233
Q ss_pred hhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 505 SGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 505 ~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
..... ..+..|++.|++++|+.++...+|++++|.+.+ + +..++...+.+.+++.+++.++.+++
T Consensus 429 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 429 QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 33333 445567789999999999999999999999999 4 34456667777777766666655544
No 55
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=9.6e-26 Score=235.14 Aligned_cols=336 Identities=15% Similarity=0.069 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHH-HHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVL-GFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l-~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
.++++.+...+...+..++.|.+.||+|+|+.+ +.+.++.+++.++.++++ +++.+++.+.+.|...+...+...++
T Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~ 129 (393)
T PRK15011 52 MVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNR--NYFVLLFVGVFLSSFGSTANPQMFAL 129 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 345554444444444444544449999999875 455666667777788888 78777666655555555678888888
Q ss_pred HhcccCcCch--hHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH
Q 008070 286 LSKWIPVSER--SRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK 363 (579)
Q Consensus 286 i~~~~~~~~r--~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~ 363 (579)
+.++.++++| +...++...+.++|.++||++++++.+++|||+.|++.+++.++..++.++..||.+++++.... +.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 208 (393)
T PRK15011 130 AREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG-TL 208 (393)
T ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc-cc
Confidence 8888876655 34568889999999999999999999999999999999888877777666666665433221100 00
Q ss_pred hhhhcCCcccccccchhHHHHhhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHH
Q 008070 364 RHILGGSISKEAVSVIPWKLILSK-APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFAN 442 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~ 442 (579)
+ . ..++ +..+......++.......+..+.|.|+++.+|+++.+.+.+.....++.+++.+
T Consensus 209 ~---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~ 270 (393)
T PRK15011 209 E---------------A---PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTML 270 (393)
T ss_pred c---------------c---cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0111 2223333333444445555667899999888999999999888877788888999
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHH
Q 008070 443 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 522 (579)
Q Consensus 443 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 522 (579)
+.|++.||+++|+....+. . ...+ .+..... .+..+...+...+.....+...........+..|+++|++
T Consensus 271 ~~G~l~dr~g~~~~~~~~~--~---~~~~--~~~~~~~--~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~ 341 (393)
T PRK15011 271 IAGYFAKRLGKRFLMRVAA--V---AGVC--FYAGMLM--AHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSA 341 (393)
T ss_pred HHHHHHHHhChHHHHHHHH--H---HHHH--HHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchH
Confidence 9999999999987543221 1 1111 1111111 1222222222222211111111222233344556779999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
.++++...++|..++|.+.|.+.+..||+..+.+.+++.+++.++.+..+
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999988888888777666553
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=1.6e-25 Score=233.47 Aligned_cols=325 Identities=14% Similarity=0.095 Sum_probs=226.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.+...+...++.++.|+++||+|||++++++.++..++.+++.+++ +++.+++.|+++|++.+...+...+++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i 116 (392)
T PRK10473 39 QLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE--TSSLFLAGRFLQGIGAGCCYVVAFAIL 116 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 456666777778888899999999999999999999999999999999988 888999999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHI 366 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (579)
.|++|+++|++++++......+|.+++|++++.+.+..+|++.|++.+++.++..++.+...+|++++.++.+..
T Consensus 117 ~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----- 191 (392)
T PRK10473 117 RDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAASS----- 191 (392)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCccc-----
Confidence 999999999999999999999999999999999888899999999998887777666666555543321110000
Q ss_pred hcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGW 446 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~ 446 (579)
.....++.++++.++...+...+.......+..+.|.++.+.+|+++.+.+.+.+...++.+++.++.++
T Consensus 192 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 261 (392)
T PRK10473 192 ----------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPF 261 (392)
T ss_pred ----------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112345677888776666555555555566667788888888999999999999999999999999999
Q ss_pred HhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHH
Q 008070 447 IADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLS 526 (579)
Q Consensus 447 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 526 (579)
+.||+++|+....+. .+...+........... ...........+............ ..+.++++ |..
T Consensus 262 l~~r~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~---g~~ 328 (392)
T PRK10473 262 ALGIFKPRTLMLTSQ-------VLFLAAGITLALSPSHA-VSLFGITLICAGFSVGFGVAMSQA--LGPFSLRA---GVA 328 (392)
T ss_pred HHHhcCHHHHHHHHH-------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhHHHHHHH--hccCcccc---cHH
Confidence 999999987544321 11111111111111111 111111111222111111111111 11222232 333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 008070 527 NTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 561 (579)
Q Consensus 527 ~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~ 561 (579)
.....++..+++.+.+++.+..|+.......+.+.
T Consensus 329 ~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 329 SSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 44456777778888888888777765555444433
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=7.5e-26 Score=231.40 Aligned_cols=316 Identities=26% Similarity=0.420 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
.....+.....+...+..++.|+++||+|||+.++++.++..++.+++.+.+ +++.+++.|++.|++.+...+...++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~ 111 (352)
T cd06174 34 SQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS--SLWLLLVGRFLLGLGGGALYPAAAAL 111 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHcccccccHhHHHH
Confidence 4567777888888899999999999999999999999999999999999988 89999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.|++|+|+|++++++......+|..++|.+++.+.+..+|++.+++.+++.++..++..+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 174 (352)
T cd06174 112 IAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL----------------- 174 (352)
T ss_pred HHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 999999999999999999999999999999999999989999999998888777666554432
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
|.++...+..++..........+.|.+..+.+|.+..+.+.......++..++.++.+
T Consensus 175 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 232 (352)
T cd06174 175 ----------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGG 232 (352)
T ss_pred ----------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777888888888899999999997799999999999999999999999999
Q ss_pred HHhhhhhccC-cchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 446 WIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 446 ~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
++.||+++|+ ....+. .+.......... ..+...........+.+.............+..+++++++.+|
T Consensus 233 ~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T cd06174 233 LLSDRLGRRRLLLLIGL-------LLAALGLLLLAL-APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASG 304 (352)
T ss_pred HHHHHHHhhhHHHHHHH-------HHHHHHHHHHHH-hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHH
Confidence 9999999986 443221 111111111111 1122223333333344433333444444555567799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
+.+....++..+++.+.|.+.+..+|+..+.+.+++.+++.++...
T Consensus 305 ~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 305 LFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999998888776543
No 58
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=7.6e-26 Score=243.41 Aligned_cols=357 Identities=15% Similarity=0.140 Sum_probs=230.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhcc----CHHHHHHHHHHHHhhhhchhhHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI----GLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~----~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
...++.+...++..++.+++|+++||+|||+++.++.+++.++.++++++++. +++.++++|+++|++.+...+..
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 136 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLS 136 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence 34677778888899999999999999999999999999999999998887621 16789999999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-----------------------ccCcchHHHHhhHHHHH
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-----------------------KFGWPSVFYSFGSLGSI 339 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-----------------------~~gwr~~f~i~~~~~li 339 (579)
..++.|++|+++|++++++......+|.++++.++..+.. .++||+.|.+.++..++
T Consensus 137 ~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i 216 (502)
T TIGR00887 137 AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL 216 (502)
T ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988876532 24799999877666655
Q ss_pred HHHHHHhhhcCCCCC---ChhhcHHHH---hhhhc----CC-cc------cccccchhHHHHhhc---hHH----HHHHH
Q 008070 340 WFALWLKKAYSSPKE---DPELRAEEK---RHILG----GS-IS------KEAVSVIPWKLILSK---APV----WALII 395 (579)
Q Consensus 340 ~~~l~~~~~~~~~~~---~~~~~~~~~---~~~~~----~~-~~------~~~~~~~~~~~l~~~---~~~----~~~~l 395 (579)
.++ ..+..||+|+- +.+.+++.. ..... +. .+ +++....++++++++ ++. +...+
T Consensus 217 ~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (502)
T TIGR00887 217 ALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAG 295 (502)
T ss_pred HHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHH
Confidence 443 44566887752 111101000 00000 00 00 000111346666643 122 21222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhH------------HhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHH
Q 008070 396 SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL------------FCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRK 463 (579)
Q Consensus 396 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~------------~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~ 463 (579)
..++..+.+++...+.|.++++ .|++....+. ...+..++.+++.++.++++||+|||+.+..+.
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~-- 372 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGF-- 372 (502)
T ss_pred HHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHH--
Confidence 3334444556667788998876 6886543221 123334566678889999999999997654332
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 464 IMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY 543 (579)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~ 543 (579)
.+..+++.+.++.. ............++....+..+..........+..|++.|+++.|+.+.+..++++++|.+.++
T Consensus 373 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~ 450 (502)
T TIGR00887 373 FILTVLFFVLGFAY--NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLY 450 (502)
T ss_pred HHHHHHHHHHHHHH--HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 11111111111110 0001111111111111111111222222223555677999999999999999999999999999
Q ss_pred HHhc----------CChHHHHHHHHHHHHHHHHHHH
Q 008070 544 ILQR----------GSWDDVFKVAVVLYIIGTLVWN 569 (579)
Q Consensus 544 l~~~----------~g~~~~~~~~~~~~~l~~~~~~ 569 (579)
+.+. .++...|.+.+++.+++.++.+
T Consensus 451 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~ 486 (502)
T TIGR00887 451 LAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL 486 (502)
T ss_pred hhccccccccccccccchHHHHHHHHHHHHHHHHhe
Confidence 9884 3455677777777777655543
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=4.8e-25 Score=230.08 Aligned_cols=322 Identities=14% Similarity=0.132 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.....+...++.+++|+++||+|||++++++.++..++.+++.+++ +++.+++.|++.|++.+...+....+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~ 120 (394)
T PRK11652 43 GAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTL 120 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3556677778888889999999999999999999999999999999999888 89999999999999999888888889
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
+.|+++++++++++++...+..+|..++|++++.+.+..|||+.|++.+++.++..++..+..||+++.+++..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 195 (394)
T PRK11652 121 PRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRTR----- 195 (394)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchhH-----
Confidence 999999999999999999999999999999999999989999999998877776655555555554332211110
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
....++.++++|.++...+..+........+..+.+.++++.+|+++.+.+++.....++.+++.++.+
T Consensus 196 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 264 (394)
T PRK11652 196 -----------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAG 264 (394)
T ss_pred -----------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 113466678888888777666666666666677788899888899999999988888888888999999
Q ss_pred HHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHH
Q 008070 446 WIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 525 (579)
Q Consensus 446 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 525 (579)
++.||.+++.. . .......................+.......+.+.......+.......+..|+++|++.++
T Consensus 265 ~l~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (394)
T PRK11652 265 RPNKRFSTLMW--Q----SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGAL 338 (394)
T ss_pred HHHHHHHHHHH--H----HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHH
Confidence 99999873311 1 11111111111111111111122222222222222223334444443334456788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 526 SNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 526 ~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
.+....+|..+++.+.|.+.+...+.
T Consensus 339 ~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 339 LGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHH
Confidence 99999999999999999887664444
No 60
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=4.5e-26 Score=245.30 Aligned_cols=347 Identities=15% Similarity=0.141 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
...+....+++..++.++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+....++.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 134 (496)
T PRK03893 57 AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVI 134 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566677778889999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH-hhh
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK-RHI 366 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~-~~~ 366 (579)
|++|+++|++++++...+..+|.+++|.+++.+.+.++||+.|++.++..++ .++.....|+.++..++.+.... ...
T Consensus 135 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~ 213 (496)
T PRK03893 135 ESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTM 213 (496)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhH
Confidence 9999999999999999999999999999999999999999999874433322 22222223332211000000000 000
Q ss_pred hcCCcccccccchhH----------HHHh-------------------------------hchHHHHHHHHHHHHHHHHH
Q 008070 367 LGGSISKEAVSVIPW----------KLIL-------------------------------SKAPVWALIISHFCHNWGTF 405 (579)
Q Consensus 367 ~~~~~~~~~~~~~~~----------~~l~-------------------------------~~~~~~~~~l~~~~~~~~~~ 405 (579)
.+.....+. ..... ...+ +.+....+.+..+......+
T Consensus 214 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (496)
T PRK03893 214 VDILYRGEH-RIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSW 292 (496)
T ss_pred HHHHhcchh-HHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccc
Confidence 000000000 00000 0000 00000001111111111112
Q ss_pred HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccch
Q 008070 406 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT 485 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (579)
....++|.|+++.+|++..+.+++.+...++.+++.++.|++.||+++|+....+. .+...............
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 365 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSL-------LISQLLIIPVFAIGGAN 365 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH-------HHHHHHHHHHhhccccH
Confidence 34568899998778999999999999999999999999999999999987543221 11111111111111122
Q ss_pred hHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 008070 486 PAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 486 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~ 564 (579)
.+..... +..+...............+..+++.+|+++|+.+....+|+.++|.+.|.+.+..|+...+.+.+++..+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 366 VWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFV 445 (496)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 2222222 211112212222222233455677899999999999999999999999999999999988876655544443
Q ss_pred H
Q 008070 565 T 565 (579)
Q Consensus 565 ~ 565 (579)
.
T Consensus 446 ~ 446 (496)
T PRK03893 446 V 446 (496)
T ss_pred H
Confidence 3
No 61
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=3.9e-25 Score=234.69 Aligned_cols=346 Identities=16% Similarity=0.163 Sum_probs=259.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHh---hhccCHHHHHHHHHHHHhhhhchhhH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---AARIGLPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~---a~~~~~~~ll~~r~l~Gig~g~~~~~ 281 (579)
...+.++..+..+..++..+++|.++||++||++++.+.++.++..++.++ ....+.+.+++.-++.|++.++..|+
T Consensus 44 ~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA 123 (524)
T PF05977_consen 44 PLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPA 123 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666677777778899999999999999999999888766554433 23346788999999999999999999
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHH
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE 361 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~ 361 (579)
.++++.+++|+++...++++.+...++..++||.++|.++..+|-.++|.+.++..++..+......++.+++.. .++.
T Consensus 124 ~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~-~~e~ 202 (524)
T PF05977_consen 124 WQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSL-PRER 202 (524)
T ss_pred HHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc-chhh
Confidence 999999999999999999999999999999999999999999999999999887766655444444332221111 1111
Q ss_pred HHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHH
Q 008070 362 EKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFA 441 (579)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~ 441 (579)
-.. .-...++.+.++|.+...++..+++++....+...+|.+.++.+|.++...|++.+..++++++|.
T Consensus 203 ~~~-----------~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga 271 (524)
T PF05977_consen 203 FFS-----------ALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA 271 (524)
T ss_pred hhh-----------hHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH
Confidence 000 011346677778888777776666666666677789999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchh
Q 008070 442 NMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAG 520 (579)
Q Consensus 442 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 520 (579)
++.+++.+|+++++++.. +.++.++.+.........+...+.+++.+............ ....+|++.+|
T Consensus 272 l~~~~l~~~~~~~~lv~~---------~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~G 342 (524)
T PF05977_consen 272 LLLPRLRRRLSSRRLVLL---------ASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRG 342 (524)
T ss_pred HHHHHhhcccCcchhhHH---------HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh
Confidence 999999999887754332 12222222223333444444444444444444444444333 55567889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 521 VLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 521 ~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
++++++.++...+..+|..+.|.+.+..|...++.+.++..+++.++....
T Consensus 343 Rv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 343 RVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999988887777776666554
No 62
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=1.9e-25 Score=232.84 Aligned_cols=338 Identities=11% Similarity=0.078 Sum_probs=239.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...++++.+...+...+.+++.|+++||+|||++++++.++.+++.++.++++ +++.+++.|++.|.+.+...+...+
T Consensus 42 ~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~ 119 (395)
T PRK10054 42 VDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN--NVTLVVLFFALINCAYSVFSTVLKA 119 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777777778888899999999999999999999999999999999998 7888888899999888888888999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
+..|.+|+++|++++++.....++|.++||++++++.. .+|++.|++.+++.++..++..+..++.++++++.++ +
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~--~- 195 (395)
T PRK10054 120 WFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG--S- 195 (395)
T ss_pred HHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh--h-
Confidence 99999999999999999999999999999999999875 7999999988877776655554444433221111000 0
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChhhhhHHhHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFAN 442 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~ 442 (579)
....++.+++|.++...+..++..+.......+.+.|.... .+.+....+.+.....+..+...+
T Consensus 196 -------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 262 (395)
T PRK10054 196 -------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQY 262 (395)
T ss_pred -------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehh
Confidence 01135578889988888777777776666666777776543 355566677777777777777778
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHH
Q 008070 443 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVL 522 (579)
Q Consensus 443 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 522 (579)
..|++.||.++|+.+..+ ..+....+........+.+.+.+.....+.+.....+.......+..|++.++++
T Consensus 263 ~~g~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~ 335 (395)
T PRK10054 263 SVGRRLNAANIRPLMTAG-------TLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASY 335 (395)
T ss_pred HHHHHHccCCchhHHHHH-------HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceeh
Confidence 889999999888644322 1111111111111111222222233333333322222222233444677888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 569 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~ 569 (579)
++..+ ...+|.++||.++|.++|+.|+...|++.+++..+..++.+
T Consensus 336 ~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 336 FSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 98765 56789999999999999999999888887766665555444
No 63
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=1.9e-25 Score=263.65 Aligned_cols=347 Identities=13% Similarity=0.084 Sum_probs=245.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHH---HHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGF---GVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~---~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
+.+.+..++.++...+.++++|+++||+|||+++.. ..++..+..++....+ +++.++++|+++|++.++..|+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN--SVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHhhchHH
Confidence 556777777888888999999999999999997533 2222222233333345 79999999999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE 362 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~ 362 (579)
.+++.+++++++|++++|+.+++.++|.++||++++++....+|++.|++.+++.++.+++. +..++.+..........
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 208 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLAS-LFIPKTGNAAPDLKIDR 208 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH-hhCCCCCCCCCCCeecc
Confidence 99999999999999999999999999999999999999999999999955444444444333 33443332211111000
Q ss_pred HhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHH
Q 008070 363 KRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFAN 442 (579)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~ 442 (579)
.. .......++.+++++.++...+..++.++..+.+..++|.|+.+.+|.++...|++.+...++.++|.+
T Consensus 209 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 279 (1140)
T PRK06814 209 NI---------IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSF 279 (1140)
T ss_pred ch---------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 00 000113577788999999999988888888888889999999998999999999999999999999999
Q ss_pred HHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHH-------------H-HHhhccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008070 443 MGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFF-------------L-TQLSHVRTPAMAVLCMACSQGSDAFSQSGLY 508 (579)
Q Consensus 443 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
+.|++.++..+++....+. ++..+..+...+. + ......+.+.+.+..++++.+......+...
T Consensus 280 ~~g~l~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 357 (1140)
T PRK06814 280 LASKLSEGRITLLYVPIGA--LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFA 357 (1140)
T ss_pred HHHHHhCCceeeeeehHHH--HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999998877666443322 1111111111110 0 0000122233333334444444444444444
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHH
Q 008070 509 SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTL 566 (579)
Q Consensus 509 ~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~-~~g~~~~~~~~~~~~~l~~~ 566 (579)
...+..+++.+|+++|+.+++..++..+++++.|.+.+ ..++...+++.+++.++..+
T Consensus 358 ~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 416 (1140)
T PRK06814 358 ALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVAI 416 (1140)
T ss_pred HHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 45666888999999999999999999999999999985 46777777666555444433
No 64
>PRK10133 L-fucose transporter; Provisional
Probab=99.95 E-value=7e-25 Score=231.13 Aligned_cols=335 Identities=10% Similarity=0.085 Sum_probs=232.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHH---HhhhccCHHHHHHHHHHHHhhhhchhhHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAARIGLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~---~~a~~~~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
....++.+..+++..++.++.|++.||+|||++++++.++++++.+++ .+++ +++.+++.|+++|+|.+...+..
T Consensus 61 ~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~ 138 (438)
T PRK10133 61 FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAA 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhH
Confidence 455677777788888888999999999999999999999999999875 4566 89999999999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-c-------------------------cCcchHHHHhhHH
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-K-------------------------FGWPSVFYSFGSL 336 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-~-------------------------~gwr~~f~i~~~~ 336 (579)
+.++.++.++++|...+++.+....+|..+++.+++.+.. . .+||++|+....+
T Consensus 139 ~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v 218 (438)
T PRK10133 139 NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAI 218 (438)
T ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998877777778999999999999999999876541 0 2566666544433
Q ss_pred HH-HHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 337 GS-IWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 415 (579)
Q Consensus 337 ~l-i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l 415 (579)
.. +..++.....|+.+.++. .+ + +.......++.++++|.++...+..++.....+....|++.|+
T Consensus 219 ~~~~~~~~~~~~~p~~~~~~~--~~-~----------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 285 (438)
T PRK10133 219 VLLVALLIMLTKFPALQSDNH--SD-A----------KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYA 285 (438)
T ss_pred HHHHHHHHHHhcCCCCCcccc--cc-c----------cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 322222222232111100 00 0 0000112355678999988877777877788888888899885
Q ss_pred -HHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 008070 416 -NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMA 494 (579)
Q Consensus 416 -~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (579)
++.+|+++.++++.+....++.++++++.+++.||+++++.+..+. .++... +.+.... .. ......+..
T Consensus 286 ~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~-----~~~~~~--~~~~~~~-~~-~~~~~~~~l 356 (438)
T PRK10133 286 VEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYA-----LIAMAL--CLISAFA-GG-HVGLIALTL 356 (438)
T ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH-----HHHHHH--HHHHHHc-CC-hHHHHHHHH
Confidence 5668999999999999999999999999999999999987654321 111111 1111111 11 122223333
Q ss_pred HHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHH
Q 008070 495 CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTL 566 (579)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~~l~~~ 566 (579)
.+.+.....+.......+. .+++.+++.++.. +..+|+.++|++.|.+.|..| .+..|++..++.+....
T Consensus 357 ~glg~~~i~P~~~s~a~~~-~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 357 CSAFMSIQYPTIFSLGIKN-LGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHHHHHHHHcc-cchhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 4444444444444444444 4556778888876 455789999999999999887 77777765555444433
No 65
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=1.3e-25 Score=234.06 Aligned_cols=327 Identities=20% Similarity=0.279 Sum_probs=229.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+.++.....+...++.++.|+++||+|||++++++.++..++.+++++++ +++.+++.|++.|++.+...+...+++
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~ 130 (398)
T TIGR00895 53 QLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALV 130 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHH
Confidence 345566667777788889999999999999999999999999999999988 889999999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHH----
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE---- 362 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~---- 362 (579)
.|++|+++|++++++...+..+|..+++.+++++.+..+|++.|++.+++.++..++.+...|+.++...+.++++
T Consensus 131 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (398)
T TIGR00895 131 SEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRI 210 (398)
T ss_pred HHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999877766666666666665543211111100
Q ss_pred Hhhhh-c---C-----Cc--ccccccchhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhH
Q 008070 363 KRHIL-G---G-----SI--SKEAVSVIPWKLILS---KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL 428 (579)
Q Consensus 363 ~~~~~-~---~-----~~--~~~~~~~~~~~~l~~---~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~ 428 (579)
.++.. . . .+ .+.+.....++.+++ .+..+.+.+..++.....+....++|.+..+ +|+++.+.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 289 (398)
T TIGR00895 211 VNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAAT 289 (398)
T ss_pred HHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 00000 0 0 00 000001111222232 2334444555556666677777888855554 8999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008070 429 FCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLY 508 (579)
Q Consensus 429 ~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
+.....++.+++.++.+++.||++++.... .....+.. ...+.. ...+........+..+.+..........
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 290 GGALFNFGGVIGSIIFGWLADRLGPRVTAL-----LLLLGAVF--AVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHH-----HHHHHHHH--HHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999873211 11111111 111111 1122223333333344444334344444
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 509 SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYI 544 (579)
Q Consensus 509 ~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l 544 (579)
...+..|++.+|+++|+.+.+..+|.+++|.+.|++
T Consensus 362 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 455667789999999999999999999999999976
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=9.3e-25 Score=226.82 Aligned_cols=332 Identities=10% Similarity=0.024 Sum_probs=236.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHH----HHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchh
Q 008070 204 KRWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVL----GFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAM 279 (579)
Q Consensus 204 ~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l----~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~ 279 (579)
....+.++.+...+...+.++++|+++||+||+... .++..+..+ +.+.+++ +++.+++.|+++|.+.+...
T Consensus 37 s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~--~~~~l~~~~~l~~~~~~~~~ 112 (382)
T TIGR00902 37 GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAH--NAWLLFIAIGLFALFFSAGM 112 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhh--hHHHHHHHHHHHHHHHccch
Confidence 356677888888888899999999999999985433 222222222 2334566 78999999999999998888
Q ss_pred hHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhc
Q 008070 280 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR 359 (579)
Q Consensus 280 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~ 359 (579)
|...++..++ +++|++++|....+.++|.+++|++++++.+.+|||+.|++.+++.++ .++.+...++.++++++ +
T Consensus 113 p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 188 (382)
T TIGR00902 113 PIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFLIKPTIPPKDAI-P 188 (382)
T ss_pred hHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHHcCCCCCCCccc-c
Confidence 9988887654 478899999999999999999999999999999999999887655333 22233333321221110 0
Q ss_pred HHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHH
Q 008070 360 AEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAV 439 (579)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~i 439 (579)
+ . +......+++++|+|+++.+.+..++.......+..+.|.|+++ .|.++.+.|++.....++.++
T Consensus 189 ~--~----------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~ 255 (382)
T TIGR00902 189 E--D----------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEII 255 (382)
T ss_pred c--c----------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHH
Confidence 0 0 00111246678899999999999998888888999999999987 899999999999988899999
Q ss_pred HHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 440 FANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 440 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
+.++.+++.||++.++.+.. +.+...+.+......++.+... ....-+......... ...+.++.|+++
T Consensus 256 ~~~~~~~l~~r~g~~~~l~~---------~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~-~~~~i~~~~~~~ 325 (382)
T TIGR00902 256 IFAFSNKLFQNCSARDLLLI---------SAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA-AMRYIAAQPGSE 325 (382)
T ss_pred HHHHhHHHHhhCCHHHHHHH---------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhh
Confidence 99999999999999865432 2222222222222233333333 333333333333333 333333447788
Q ss_pred hhHHHHHHHH-HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 008070 519 AGVLLGLSNT-AGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 519 ~g~~~g~~~~-~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
+++..++++. ...+|..+++.++|+++|+.|+ ..|.+.+++.+++.++
T Consensus 326 ~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 326 IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 8999999874 5679999999999999999986 6677777777766444
No 67
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=3.6e-24 Score=223.99 Aligned_cols=344 Identities=13% Similarity=0.114 Sum_probs=231.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhc-----CCcH-HHHHHHHHHHHHHHHHHhhhc-cCHHHHHHHHHHHHhhhhchh
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKF-----GGKP-VLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAM 279 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~~~~ll~~~a~~-~~~~~ll~~r~l~Gig~g~~~ 279 (579)
.++++..+... .+..+++|+++||+ |||+ +++++.++.+++.+++++.+. .+++.+++..++.++..+...
T Consensus 35 ~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 112 (402)
T PRK11902 35 TIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQD 112 (402)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 44444443333 57779999999999 8765 788888888888888787732 247778888888899899999
Q ss_pred hHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 280 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 280 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~-~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.+. .|||..|++.+++.++..+.. +..+|+++++++.
T Consensus 113 ~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~ 191 (402)
T PRK11902 113 IVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPEVPARPP 191 (402)
T ss_pred HHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCccccccc
Confidence 99999999999999999999999999999999999999999885 599999999888776655443 3344432221111
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHH-HHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPW-LTM 437 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~-~~~ 437 (579)
++ ..+ .....+++++++|.++.+++..++..........+.+.++.+.+|+++.+.+++....+ ++.
T Consensus 192 ~~-~~~-----------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~ 259 (402)
T PRK11902 192 RS-LGE-----------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAAT 259 (402)
T ss_pred ch-hHH-----------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHH
Confidence 00 000 01235677899999988777777666555444455566677778999999999876655 468
Q ss_pred HHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH----HHhhhhhhhhhhhhhhccc
Q 008070 438 AVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMA----CSQGSDAFSQSGLYSNHQD 513 (579)
Q Consensus 438 ~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 513 (579)
+++.++.+++.||+++|+...... ....+....+...... .+..+....... .++..............+
T Consensus 260 i~g~~~~g~l~~r~g~~~~l~~~~----~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 333 (402)
T PRK11902 260 IVGALAGGTLMVRLGLYRSLMLFG----VLQAVSNLGYWVLAVT-PKHLWTMALAIGIENLCGGMGTAAFVALLMALCN- 333 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHH----HHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 899999999999999886533211 0111111111111111 122222222221 122222222333333332
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 514 IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 514 ~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.+..++..++.+....++..+++.++|.+.|..||...|.+.+++.+++.++.....+
T Consensus 334 --~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 334 --RSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2223445566666777888877889999999999999999999888887766655443
No 68
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=5.2e-26 Score=221.20 Aligned_cols=343 Identities=17% Similarity=0.109 Sum_probs=266.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...++++...-.+...+.+++.|.+.||+|+|..+++|++++..+++++++.. +++.++++|.+||+|.++..++..+
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 34578888888889999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHhcccCcC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH
Q 008070 285 MLSKWIPVS-ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK 363 (579)
Q Consensus 285 ~i~~~~~~~-~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~ 363 (579)
+++|.+|++ +|++++|+...+.++|.++||++||++++..|.+.+|++.+++.++-.++.++..++...++....
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~~---- 258 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDSTE---- 258 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccccc----
Confidence 999999865 579999999999999999999999999999999999999999999988887777654333221100
Q ss_pred hhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHH
Q 008070 364 RHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 443 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~ 443 (579)
...++..++++|.++.........+.........++.+..+.+..+..+.|+.+....+...++..+
T Consensus 259 -------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~l 325 (464)
T KOG3764|consen 259 -------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNL 325 (464)
T ss_pred -------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCch
Confidence 1134667899999998888888778787778888899998888856669999999999999999999
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchh---HHHHHHHHHHhhhh-hhhhhhhhhhccccCCC--
Q 008070 444 GGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP---AMAVLCMACSQGSD-AFSQSGLYSNHQDIGPR-- 517 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 517 (579)
.|.+.||++..+++. .+.+++..+.........+.+ ++......++++.. ....+.+.........+
T Consensus 326 fg~la~k~~~~~wl~-------~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~ 398 (464)
T KOG3764|consen 326 FGKLADKYPHLRWLL-------SLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGF 398 (464)
T ss_pred HHHHHHhcCchhHHH-------HHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcccc
Confidence 999999999665432 223333333332222222222 22222222222222 22223333232221222
Q ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 518 -YAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 518 -~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
..|.+.++......+|.++||.++|.+.+..|+.+...+.++..++-.-++.+++.
T Consensus 399 ~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 399 NVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred ceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999998888887776665555543
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=2.9e-24 Score=223.15 Aligned_cols=333 Identities=11% Similarity=0.072 Sum_probs=230.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCc----HHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchh
Q 008070 204 KRWVVVLLCFSAFLLCNMDRIVGGIWADKFGGK----PVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAM 279 (579)
Q Consensus 204 ~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr----~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~ 279 (579)
....++++.++..+...+.++++|++.||+||| +.+.++..+. ........+ +++.+++.|++.|++.+...
T Consensus 37 s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~l~i~~~l~g~~~~~~~ 112 (382)
T PRK11128 37 TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH--SFWLLFVAIGLFNLFFSPLV 112 (382)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc--cHHHHHHHHHHHHHHHcccc
Confidence 356778888888999999999999999999994 3332222222 222233345 78999999999999999899
Q ss_pred hHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhc
Q 008070 280 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR 359 (579)
Q Consensus 280 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~ 359 (579)
+...+++.++ .++|+++++....+.++|.++||++++++.+++|||..|++.++..++..+.. +..|+.+++.++
T Consensus 113 ~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~-- 187 (382)
T PRK11128 113 PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPTIMPQGES-- 187 (382)
T ss_pred cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCCCCCcccc--
Confidence 9888888876 46688889999999999999999999999999999999988776554443332 333332111110
Q ss_pred HHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHH
Q 008070 360 AEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAV 439 (579)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~i 439 (579)
++. .+.....+++++++|.++.+.+..++..........+.|.|+.+ .|++..+.|.+.....++.++
T Consensus 188 --~~~---------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~ 255 (382)
T PRK11128 188 --RQQ---------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVL 255 (382)
T ss_pred --ccc---------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHH
Confidence 000 00012357789999999988888887777777788888999977 799999999999988888999
Q ss_pred HHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCch
Q 008070 440 FANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYA 519 (579)
Q Consensus 440 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (579)
..++.+++.||+++++.+..+ .+..++........+..+..++..++.+.......+....+..+.+++++
T Consensus 256 ~~~~~g~l~~r~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 326 (382)
T PRK11128 256 IFAFSNRLFRRWSARDLLLLS---------AICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEV 326 (382)
T ss_pred HHHHHHHHHHHCCHHHHHHHH---------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhh
Confidence 999999999999998654322 11111111111222333433333333333333334444444444567777
Q ss_pred hHHHHHHH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 008070 520 GVLLGLSN-TAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 520 g~~~g~~~-~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
++..++.+ ....+|..+||.++|.+.|..|+ ..++..+++.+++.++
T Consensus 327 ~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 327 IRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 88899887 44567779999999999999887 4666666666555443
No 70
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.94 E-value=4.9e-24 Score=222.69 Aligned_cols=333 Identities=14% Similarity=0.127 Sum_probs=233.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhh-ccCHHHHHHHHHHHHhhhhchhhHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~-~~~~~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
.....++.+..+++..++.++.|++.||+|||++++++.++++++.+++..+. ..+++.+++.|++.|+|.+...+..+
T Consensus 37 ~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~ 116 (410)
T TIGR00885 37 AFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAAN 116 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhh
Confidence 45578888899999999999999999999999999999999999998865432 11789999999999999999999999
Q ss_pred HHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--------------------------cCcchHHHHhhHHH
Q 008070 284 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--------------------------FGWPSVFYSFGSLG 337 (579)
Q Consensus 284 ~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~--------------------------~gwr~~f~i~~~~~ 337 (579)
.++.++.|+++|++.+++.+...++|..+||.+++.+... .+||++|++.+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~ 196 (410)
T TIGR00885 117 PYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVV 196 (410)
T ss_pred HHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887532 36999999988877
Q ss_pred HHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 338 SIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ 417 (579)
Q Consensus 338 li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~ 417 (579)
++..++..+. + .|+.+++.. ++ .......+.++++|.++...+..+++........++++.|.++
T Consensus 197 ~~~~~~~~~~-~-~p~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~ 261 (410)
T TIGR00885 197 LAVALLIMLT-K-MPALNHSDA--KQ-----------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVR 261 (410)
T ss_pred HHHHHHHHHh-c-CCCCCcccc--cc-----------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7655444322 1 111111000 00 0001134567889999988888888888888888999999976
Q ss_pred hh-CCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 008070 418 VL-KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACS 496 (579)
Q Consensus 418 ~~-g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (579)
.. +.+....+........+..+|+++++++.||+++++.+... ...+.++ ..+... .+.......+...+
T Consensus 262 ~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~-----~~~~~~~--~ll~~~--~~~~~~~~~l~~~g 332 (410)
T TIGR00885 262 LIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAY-----AIIGMAL--CLGSIF--AGGHVGLYCLTLCS 332 (410)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH-----HHHHHHH--HHHHHH--cCChHHHHHHHHHH
Confidence 32 44444455566666788899999999999999988653321 1111111 111111 12223334444455
Q ss_pred hhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC------ChHHHHHHHHHHHHH
Q 008070 497 QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG------SWDDVFKVAVVLYII 563 (579)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~------g~~~~~~~~~~~~~l 563 (579)
.+.....+.......+..+++......++... .+|+++.|++.|.+.|.. +++..|++...+.+.
T Consensus 333 lf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 333 AFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 55545554444445555555554434444443 399999999999999953 577777765544433
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=2.5e-24 Score=221.37 Aligned_cols=312 Identities=13% Similarity=0.113 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.+..+++..++.++.|+++||+|||+++.++.++..++.+++ ..+ +++.+++.|++.|++.+...+....+
T Consensus 35 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~~~~~~g~g~~~~~~~~~~~ 111 (355)
T TIGR00896 35 SVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFAGTALIGVGIAIINVLLPSL 111 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHHHHHHHHHHHHHHhccchHH
Confidence 346778888889999999999999999999999999999888888777 666 78889999999999999888888889
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc--CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK 363 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~--gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~ 363 (579)
+.++++ ++|+++++++..+..+|..+++.+++.+.+.. +||+.|.+.+++.++..... .++.++++++..
T Consensus 112 ~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~---~~~~~~~~~~~~---- 183 (355)
T TIGR00896 112 IKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAW---IPQVRRRVAANQ---- 183 (355)
T ss_pred HHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH---hhhhccccCCCC----
Confidence 999985 78999999999999999999999999888764 39999887766544432222 222111110000
Q ss_pred hhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHH
Q 008070 364 RHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 443 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~ 443 (579)
. ......++++++|.++...+..++....++....++|.|+++ .|++..+.+.+.+...++.++++++
T Consensus 184 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~ 251 (355)
T TIGR00896 184 T-----------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALL 251 (355)
T ss_pred C-----------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000123456788888887777777777788888999999987 6999999999999999999999999
Q ss_pred HHHHhhhhhccCc-chHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhcccc-CCCchhH
Q 008070 444 GGWIADTLVSKGL-SITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDI-GPRYAGV 521 (579)
Q Consensus 444 ~g~l~dr~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~ 521 (579)
.|++.||++.++. ...+ ..+...+.............. ...+.+.+.....+.......... +++.++.
T Consensus 252 ~g~l~dr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~ 322 (355)
T TIGR00896 252 IPALARRVKDQRGIVAVL-------AVLQLVGLCGLLFAPMHGLWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAA 322 (355)
T ss_pred HHHHHhhhccchHHHHHH-------HHHHHHHHHHHHHhhhhHHHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHH
Confidence 9999999965442 2211 111111111111111111111 222333333333333223233333 3467799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 522 LLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 522 ~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
..++.+....++.+++|.+.|++.|+.|
T Consensus 323 ~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 323 LSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999854
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.94 E-value=2.9e-24 Score=254.20 Aligned_cols=343 Identities=15% Similarity=0.113 Sum_probs=238.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH---hhhccCHHHHHHHHHHHHhhhhchhhH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP---VAARIGLPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~---~a~~~~~~~ll~~r~l~Gig~g~~~~~ 281 (579)
...+.++.++.++...++.+++|+++||+|||++++++.++.+++.++.. +.+ +++.+++.|+++|++.+...++
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~ 123 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG--WFWLAFAVTFLLGAQSAIYSPA 123 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHhhchH
Confidence 34566777788888889999999999999999999998877666655543 345 6899999999999999999999
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--------c-CcchHHHHhhHHHHHHHHHHHhhhcCCC
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--------F-GWPSVFYSFGSLGSIWFALWLKKAYSSP 352 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~--------~-gwr~~f~i~~~~~li~~~l~~~~~~~~~ 352 (579)
..+++.|++|+++|++++++...+..+|.++|+++++++... + +|++.+.+.++..++..++..+..++.+
T Consensus 124 ~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1146)
T PRK08633 124 KYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVP 203 (1146)
T ss_pred HHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCC
Confidence 999999999999999999999999999999999999999875 2 3445544444433333333334445444
Q ss_pred CCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChh-hhhHHhH
Q 008070 353 KEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT-ESGLFCV 431 (579)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-~~g~~~~ 431 (579)
+......+... ..........++.+++++.++...+..++..+..+.+..++|.|+.+.+|++.. ..+++.+
T Consensus 204 ~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~ 276 (1146)
T PRK08633 204 AAAPEVFDKKK-------YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLA 276 (1146)
T ss_pred CCCcccccccc-------cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHH
Confidence 32221100000 000011123466778889888888877777777777888999999998999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhc
Q 008070 432 LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNH 511 (579)
Q Consensus 432 ~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (579)
...++.+++.++.+++.||+++++.+..+. +...++ +.++.. ..+.+..++..++++.+......+......
T Consensus 277 ~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~--~~~~~~-----~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 348 (1146)
T PRK08633 277 ASAIGIGIGSLLAGRLSGRHIELGLVPLGA--LGLALS-----LFLLPT-APSLASVLVLFFLFGFSAGLFIVPLNALIQ 348 (1146)
T ss_pred HHHHHHHHHHHHHHHHhCCceEccchhHHH--HHHHHH-----HHHHHH-hhhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 999999999999999999999886544321 111111 111111 112222233333333333333333333444
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHH
Q 008070 512 QDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 512 ~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~ 564 (579)
+..+++.+|+++|+.+++..++.++++.+++.+... .++...+++.+.+.++.
T Consensus 349 ~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 349 FRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred hcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 556789999999999999999998888877766542 34555565555544443
No 73
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=1.6e-24 Score=223.63 Aligned_cols=316 Identities=17% Similarity=0.191 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.++.....++..+..+++|+++||+|||++++++.++..++.+++++++. +++.+++.|+++|++.+. .+...++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~ 114 (366)
T TIGR00886 37 AQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ-SYSVLLLLRLFIGIAGGS-FASCMPW 114 (366)
T ss_pred HHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHhchh-hHhHHHH
Confidence 34567778888888999999999999999999999999999999999888763 578899999999999664 5667899
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc----------ccCcchHH-HHhhHHHHHHHHHHHhhhcCCCCC
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----------KFGWPSVF-YSFGSLGSIWFALWLKKAYSSPKE 354 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~----------~~gwr~~f-~i~~~~~li~~~l~~~~~~~~~~~ 354 (579)
+.+++|+++|++++++.....++|..+++.+++.+.. ..+||+.| ++.+++.++..++.+...++.|++
T Consensus 115 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (366)
T TIGR00886 115 ISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPG 194 (366)
T ss_pred HHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcc
Confidence 9999999999999999998888888888887776654 34899999 444555555555555555554432
Q ss_pred ChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHH
Q 008070 355 DPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPW 434 (579)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~ 434 (579)
+++..+.+.. ......+.......++.+++|.++...+..++.....+.+..+.|.|+++.+|+++.+++.+..+..
T Consensus 195 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 271 (366)
T TIGR00886 195 KPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGG 271 (366)
T ss_pred cccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 2111110000 0000000111124566788899888888888777777888899999999989999999999888999
Q ss_pred HHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 008070 435 LTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR--TPAMAVLCMACSQGSDAFSQSGLYSNHQ 512 (579)
Q Consensus 435 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (579)
+..++++++.|++.||+++|+....+ .........+....... ..........+.....+...........
T Consensus 272 ~~~~~~~~~~g~l~~r~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 344 (366)
T TIGR00886 272 LLGSLARPLGGAISDRLGGARKLLMS-------FLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVP 344 (366)
T ss_pred HHHHHHhhccchHHHhhccchhHHHH-------HHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcch
Confidence 99999999999999999998654322 11111111111111111 2222222222222222333333444444
Q ss_pred ccCCCchhHHHHHHHHHHHHH
Q 008070 513 DIGPRYAGVLLGLSNTAGVLA 533 (579)
Q Consensus 513 ~~~~~~~g~~~g~~~~~~~lg 533 (579)
+..|+++|+++|+.+...++|
T Consensus 345 ~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 345 HIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred hhchhhcccHHHHHHHhccCC
Confidence 556789999999999888765
No 74
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1e-24 Score=228.06 Aligned_cols=242 Identities=19% Similarity=0.270 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
...+.++.++++.++.+++|.|.||++..+.+....+++++..++..... |++.+++.|++.|+..+..+|+...+++
T Consensus 83 l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~lg 160 (495)
T KOG2533|consen 83 LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAILG 160 (495)
T ss_pred hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 46677778888889999999999999999999999999888888887787 8999999999999999999999999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh------cccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHH
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE 361 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~------~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~ 361 (579)
.|+.++||+..++++.+..++|.++|.+++..+. ...||||.|++.+++.++..++.++.+|+.|.+..-..++
T Consensus 161 ~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ 240 (495)
T KOG2533|consen 161 NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDE 240 (495)
T ss_pred hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchH
Confidence 9999999999999999999999999999999863 4579999999999999999999999999988755433333
Q ss_pred HHh----hhh--cCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH
Q 008070 362 EKR----HIL--GGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL 435 (579)
Q Consensus 362 ~~~----~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~ 435 (579)
++. ... ......++.+...+++.+++|.+|.+.+..++.....+++.+|+|.|+.+..|++..++..+.++..+
T Consensus 241 ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~ 320 (495)
T KOG2533|consen 241 EKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDV 320 (495)
T ss_pred HHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHh
Confidence 321 111 11111122566788999999999999999999999999999999999999667999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 008070 436 TMAVFANMGGWIADTL 451 (579)
Q Consensus 436 ~~~ig~~~~g~l~dr~ 451 (579)
+++++.++.|+++||+
T Consensus 321 ~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 321 GGIVGLILAGYLSDRL 336 (495)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 9999999999999995
No 75
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1e-24 Score=230.36 Aligned_cols=354 Identities=16% Similarity=0.201 Sum_probs=270.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHH-HHHHHHHHhhhhchhhHHHHHH
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL-LIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~l-l~~r~l~Gig~g~~~~~~~~~i 286 (579)
+.++.++...+.++..|+.+.+.||+|.|.+.++|.++..++.++.++++ ++|++ +...++.|+|.++.+.+...++
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv 160 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVIL 160 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhh
Confidence 44555666666667779999999999999999999999999999999999 77665 5667999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChh---------
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE--------- 357 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~--------- 357 (579)
..|| +++|+.++|+...+.++|.++-|.+..++.+.+|||+.+++.+.+.+-.++......|..+...+.
T Consensus 161 ~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~ 239 (509)
T KOG2504|consen 161 GTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSA 239 (509)
T ss_pred hhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcccc
Confidence 9999 699999999999999999999999999999999999999999998877777777776633332111
Q ss_pred -----------hcHHHH------------hhhhcCCcccc--cccchhH---HHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 008070 358 -----------LRAEEK------------RHILGGSISKE--AVSVIPW---KLILSKAPVWALIISHFCHNWGTFILLT 409 (579)
Q Consensus 358 -----------~~~~~~------------~~~~~~~~~~~--~~~~~~~---~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 409 (579)
....++ ....+...+.. ....... .++++++.++.+.+...+...+++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~ 319 (509)
T KOG2504|consen 240 ASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFV 319 (509)
T ss_pred ccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00000000000 1111111 4688999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 008070 410 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMA 489 (579)
Q Consensus 410 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (579)
++|.|..+ .|++..+++.++++.++..++++++.|+++|+...++. .+..++++..++...........+.+
T Consensus 320 ~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~-------~~~~~~ll~~gl~~~~~p~~~~~~~l 391 (509)
T KOG2504|consen 320 YLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL-------VLFLLTLLIAGLARLFLPFATTYVGL 391 (509)
T ss_pred HHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH-------HHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999996 89999999999999999999999999999999885433 22333333333333333333444333
Q ss_pred -HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHH
Q 008070 490 -VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 490 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~~l~~~~ 567 (579)
..+.+++...+...........+.++.++...++|+...+..++..+||++.|++.|..| |...|++++++.+++.++
T Consensus 392 ~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 392 IVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 333334433333333333345566788999999999999999999999999999999866 999999999999999877
Q ss_pred HHHhh
Q 008070 568 WNLFA 572 (579)
Q Consensus 568 ~~~~~ 572 (579)
+++..
T Consensus 472 ~~~~~ 476 (509)
T KOG2504|consen 472 LLILR 476 (509)
T ss_pred HHHhH
Confidence 76665
No 76
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.9e-26 Score=227.95 Aligned_cols=336 Identities=16% Similarity=0.184 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhc
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 288 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 288 (579)
+++.....+...+..|++|+++|||+||+++.+|..++.++.++++++. .+|+++++|.+.|+|.+...++++++++|
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD 148 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIAD 148 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhh
Confidence 5566667777778889999999999999999999999999999999997 89999999999999999999999999999
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC-cchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 289 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 289 ~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g-wr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
.+|.++|++++++++.+..+|..+|.+.+..+.+..+ |||.|++.+++++++.++.+++.+|+++...++.+.+...
T Consensus 149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-- 226 (493)
T KOG1330|consen 149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-- 226 (493)
T ss_pred cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC--
Confidence 9999999999999999999999999999999988766 9999999999999999999888887665322211111100
Q ss_pred cCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 368 GGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ---VLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~---~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
.........+.+.+.+++.+....+......+....+..|.|.+... ..|++..+..++..+..+++.+|.+++
T Consensus 227 ---~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~G 303 (493)
T KOG1330|consen 227 ---VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFG 303 (493)
T ss_pred ---CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheeh
Confidence 01112223455666666777766666666666666666666665543 345566666777778888999999999
Q ss_pred HHHhhhhhccCc--chHHHHHHHHHHHHHHHHHHHHHh--hccchhHHHHHHHHHHhhhhhhhhhhhh-hhccccCCCch
Q 008070 445 GWIADTLVSKGL--SITAVRKIMQSIGFLGPAFFLTQL--SHVRTPAMAVLCMACSQGSDAFSQSGLY-SNHQDIGPRYA 519 (579)
Q Consensus 445 g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 519 (579)
|.++||+.++.. ............+......++... ......+..+++++++............ ...+.++|+.|
T Consensus 304 giisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~R 383 (493)
T KOG1330|consen 304 GIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRR 383 (493)
T ss_pred HHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccc
Confidence 999999644211 111111222223322222222222 2223333344444444433333333322 34556799999
Q ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHhc-CChH
Q 008070 520 GVLLGLSNTAGVL-AGVFGTAATGYILQR-GSWD 551 (579)
Q Consensus 520 g~~~g~~~~~~~l-g~~ig~~l~g~l~~~-~g~~ 551 (579)
.+++++...+..+ |.+-+|.+.|.+.|+ .||.
T Consensus 384 t~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 384 TTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred cHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 9999998888766 555556699999987 4555
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.93 E-value=1.3e-23 Score=221.19 Aligned_cols=351 Identities=13% Similarity=0.064 Sum_probs=222.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH---hhhcc---CHHHHHHHHHHHHhhhhch
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP---VAARI---GLPFLLIMRAFMGIGEGVA 278 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~---~a~~~---~~~~ll~~r~l~Gig~g~~ 278 (579)
...++++.+...+...+.++++|+++||+|||++++++..+.+++..... .++.. .+...++.+++.|.+....
T Consensus 45 ~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (420)
T PRK09528 45 GTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAG 124 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 45667888888888889999999999999999999887766655443221 11100 0111223333344333333
Q ss_pred hhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 279 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 279 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
.+....+..+ . .+++++.+|......++|..++|++++.+.+ .+|++.|++.+++.++..++.++..++++++....
T Consensus 125 ~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (420)
T PRK09528 125 AGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA 201 (420)
T ss_pred hhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhc
Confidence 3333333322 2 3466788899999999999999999999876 58999999888777776666555544433221110
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChhhhhHHhHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL---KFNLTESGLFCVLPWL 435 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~g~~~~~~~~ 435 (579)
+ ++.. ++++......+..+++|.++.+.+..++..........+.|.|+.+.+ +.+..+.+.+.++..+
T Consensus 202 ~-~~~~-------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 273 (420)
T PRK09528 202 N-ALGA-------NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF 273 (420)
T ss_pred c-chhc-------ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence 0 0000 011112234556788888877666655555555555567787776643 4566778888888888
Q ss_pred HHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhh-hhhhhhhcccc
Q 008070 436 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFS-QSGLYSNHQDI 514 (579)
Q Consensus 436 ~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 514 (579)
+.+++.++.|++.||+++|+....+. .+......+... ...++..+....+.+...... ........+..
T Consensus 274 ~~~~~~~~~g~l~dr~g~~~~~~~~~-------~l~~~~~~l~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 344 (420)
T PRK09528 274 LEALIMFFAPFIINRIGAKNALLLAG-------TIMAVRIIGSGF--ATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF 344 (420)
T ss_pred HHHHHHHHHHHHHHHhCcchhhHHHH-------HHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999997644321 111111111111 222333333222222222222 22223334556
Q ss_pred CCCchhHHHHH-HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 515 GPRYAGVLLGL-SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 515 ~~~~~g~~~g~-~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
+++.+++..++ +++...+|.++++.+.|++.|..||+..|.+.+++.+++.++.....+++
T Consensus 345 ~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 345 DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77888887765 67778899999999999999999999999998888877776666554443
No 78
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=9.6e-23 Score=210.30 Aligned_cols=367 Identities=14% Similarity=0.097 Sum_probs=260.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhcc-CHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI-GLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~-~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
++-..+.+..+++.++++++.|+++||+|||..+.++.++..++.+++.++... ++.+++++|++.|+..|........
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pm 139 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPM 139 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 344677788889999999999999999999999999999988888776655311 5788999999999999999999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHH--hhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCCh----hh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI--LIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP----EL 358 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~--l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~----~~ 358 (579)
++.|..|.+.||....+.+.+..+|.+++..++.. +.+...|++.+.+..+.+++..++ +.+.||+|+--- +.
T Consensus 140 yl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk~Ll~~k~~~ 218 (485)
T KOG0569|consen 140 YLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPKYLLIKKGDE 218 (485)
T ss_pred HHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcchHHHHcCCH
Confidence 99999999999999999999999999999776643 334556999998888777665544 445677775211 11
Q ss_pred cHHHHh-hhhcC----------------CcccccccchhHHHHhhchHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Q 008070 359 RAEEKR-HILGG----------------SISKEAVSVIPWKLILSKAPVWAL-----IISHFCHNWGTFILLTWMPTYYN 416 (579)
Q Consensus 359 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~~~~~~~p~~l~ 416 (579)
++.++. +...+ ..+.++....+++++++++....- .+.......+.+....|...++.
T Consensus 219 ~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~ 298 (485)
T KOG0569|consen 219 EEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK 298 (485)
T ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH
Confidence 111000 00000 011111244567888887665443 23333334445566667777777
Q ss_pred HhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc-ch-hHH--HHHH
Q 008070 417 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV-RT-PAM--AVLC 492 (579)
Q Consensus 417 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~~~ 492 (579)
+ .|++..++.+.....++...+..+++.++.||+|||++++.+...+.....+ +.......... .. .+. ...+
T Consensus 299 ~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~--~~~~~~l~~~~~~~~~y~~i~~~~ 375 (485)
T KOG0569|consen 299 T-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL--MSIALFLSNSFGSWLSYLCIAAIF 375 (485)
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 7 6999999999999999999999999999999999998877665333322222 22222222222 11 112 2222
Q ss_pred HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 493 MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
.....+..+..+.......+.++++.|..++++..++..+..++-...+..+.+..|- ..|+...+.+++..+..+...
T Consensus 376 ~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~l 454 (485)
T KOG0569|consen 376 LFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYL 454 (485)
T ss_pred HHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhC
Confidence 2233333344555566677778999999999999999999999999999999998876 677777777777777777776
Q ss_pred cCccc
Q 008070 573 TGERV 577 (579)
Q Consensus 573 ~~~~~ 577 (579)
++.|.
T Consensus 455 PETkg 459 (485)
T KOG0569|consen 455 PETKG 459 (485)
T ss_pred cccCC
Confidence 66553
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=8e-23 Score=213.47 Aligned_cols=346 Identities=13% Similarity=0.072 Sum_probs=231.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHH---Hhhhc---cCHHHHHHHHHHHHhhhhch
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAAR---IGLPFLLIMRAFMGIGEGVA 278 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~---~~a~~---~~~~~ll~~r~l~Gig~g~~ 278 (579)
...+.++.+...+...+.++++|+++||+|||+.++.+.+..+++.... .+.+. ..+..+++.+++.|++.+..
T Consensus 37 ~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 116 (396)
T TIGR00882 37 KTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAG 116 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3456788888999999999999999999999999988777665544332 12110 02334567788889988888
Q ss_pred hhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 279 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 279 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
.+....++.+.. ++++..++......++|.++||++++.+.+ .+|++.|++.+++.++..++.+...++.++++..
T Consensus 117 ~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (396)
T TIGR00882 117 AGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATV- 192 (396)
T ss_pred hhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhh-
Confidence 888887777754 334567788888889999999999998865 6999999998888877766555544443221110
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChhhhhHHhHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL---KFNLTESGLFCVLPWL 435 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~g~~~~~~~~ 435 (579)
+ +. .+ .++++....+.++++++|.++.+.+..++....+.....+.+.|+.+.+ +.+....|.+.++..+
T Consensus 193 -~-~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i 265 (396)
T TIGR00882 193 -A-NA---LG--ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGEL 265 (396)
T ss_pred -h-cc---cc--cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence 0 00 00 0011122245778899999887777766666666666667888887754 4556677888888888
Q ss_pred HHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hcccc
Q 008070 436 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDI 514 (579)
Q Consensus 436 ~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 514 (579)
...++.+..+++.||+++|+....+. .+......... .....+.......+.+............ ..+..
T Consensus 266 ~~~~~~~~~g~l~~r~g~~~~l~~~~-------~l~~l~~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 266 LNALIMFCAPLIINRIGAKNALLIAG-------TIMSVRIIGSS--FATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHH-------HHHHHHHHHHH--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999999999999999997654321 11111111111 1222332222222222222222211222 23335
Q ss_pred CCCchhHHHHH-HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 008070 515 GPRYAGVLLGL-SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 515 ~~~~~g~~~g~-~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
+++.+++..+. .+....+|+++++.+.|++.|..||+.+|.+.+++.++..++..+
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 66777777766 678899999999999999999999999999999888877766543
No 80
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=1.1e-23 Score=203.84 Aligned_cols=351 Identities=18% Similarity=0.106 Sum_probs=224.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
...-+.+.+...++.++.++.+|.++||+|||++++++.+..++..++.+++. |+..+++.|++.|+..| ......+
T Consensus 67 ~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 67 VFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred chhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccC-chHHHHH
Confidence 45567888999999999999999999999999999999999999999999999 88777777999999988 5677889
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCcchHHH---HhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ---KFGWPSVFY---SFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~---~~gwr~~f~---i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
+++|.+++|+|+++++.+....++|.++||.+|+++.+ ..|--+.++ +..++...-.....++.||+-+.+++.
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~ 223 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN 223 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc
Confidence 99999999999999999999999999999999999987 233211111 111122221222333445543322222
Q ss_pred cHHH-HhhhhcCCcccccccchhHHHHhhchHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHh
Q 008070 359 RAEE-KRHILGGSISKEAVSVIPWKLILSKAPV-------WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFC 430 (579)
Q Consensus 359 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~ 430 (579)
++.. ..+......+..+.....-....+|++. ..+.+-.+++...+..+..+.+.+..+.+|+++.+.|.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl 303 (451)
T KOG2615|consen 224 DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVL 303 (451)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeee
Confidence 0000 0000000000000000111112333332 2233344444444444444555554567899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhh
Q 008070 431 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSN 510 (579)
Q Consensus 431 ~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (579)
+..++.+.+.........+|.... .. ......+.++...+.+ .........+.....+..+......+.+...
T Consensus 304 ~~tGl~m~~~ql~~~~~l~~~~~~-~~----a~l~~~l~~~vP~~ll--ls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~L 376 (451)
T KOG2615|consen 304 STTGLLMLVIQLALVPILPRYKGN-IK----AVLLFSLLLIVPAFLL--LSLARTPVVLYLGSTLKSFSTASVVTCLTSL 376 (451)
T ss_pred ehhhHHHHHHHHhccccccccccc-hh----hHHHHHHHHHHHHHHH--HhccccchhhhHHHHHHHHHHHHhhHHHHHH
Confidence 988888888777666666665422 10 1122222222222222 2223333444444445555555556666654
Q ss_pred ccc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHH
Q 008070 511 HQD-IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGT 565 (579)
Q Consensus 511 ~~~-~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~~ 565 (579)
... .++++||+++|+....+.++-++||.+.|.+..+ .+-+.++...+.+.++..
T Consensus 377 v~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~~ 433 (451)
T KOG2615|consen 377 VHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIPM 433 (451)
T ss_pred HHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHHH
Confidence 444 5668999999999999999999999999999876 444555555555555553
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=2.8e-22 Score=206.21 Aligned_cols=292 Identities=12% Similarity=0.067 Sum_probs=204.7
Q ss_pred hhhhhhhhhhc-----CCcHH-HHHHHHHHHHHHHHHHhhhc-cCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCch
Q 008070 223 RIVGGIWADKF-----GGKPV-LGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 295 (579)
Q Consensus 223 ~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~ll~~~a~~-~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r 295 (579)
.+++|+++||+ |||+. ++.+.++.++..++.++.+. .+.+.+.+..++.+++.+...++..+++.|++|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 78999999998 89886 56778888887777777631 2456677888888999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcccC--------cchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 296 SRSLAFVYSGMYLGSVTGLAVSPILIQKFG--------WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 296 ~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g--------wr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
+++.++...+..+|.++++.+++.+....+ ||..|++.+++.++..+..++..+|+.+..+.. +++..
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~~~~~--- 193 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP-KPLTQ--- 193 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc-hhHHH---
Confidence 999999999999999999999999998888 999999988877775555554455532211111 10000
Q ss_pred cCCcccccccchhHHHHhhchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHH-HHHHHHHHH
Q 008070 368 GGSISKEAVSVIPWKLILSKAP---VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPW-LTMAVFANM 443 (579)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~---~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~-~~~~ig~~~ 443 (579)
.....++++++++. ++.+.+..++.....+....++|.|+++ +|+++.+.+.+....+ ++.+++.++
T Consensus 194 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~ 264 (356)
T TIGR00901 194 --------AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLI 264 (356)
T ss_pred --------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 01124566777765 7777777777778888888999999998 8999999998887666 577899999
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc------chhHHHHHHHHH-HhhhhhhhhhhhhhhccccCC
Q 008070 444 GGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV------RTPAMAVLCMAC-SQGSDAFSQSGLYSNHQDIGP 516 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 516 (579)
+|++.||+|+|+.+..+. .+..+.. ........... ...+....+.++ +.+.............+..|+
T Consensus 265 ~g~l~~r~g~~~~l~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 340 (356)
T TIGR00901 265 GGIIMQPLNILYALLLFG--IVQALTN--AGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP 340 (356)
T ss_pred HHHHHhhhhHHHHHHHHH--HHHHHHH--HHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 999999999887543321 1111111 11111100100 122333333333 333333344444445666888
Q ss_pred CchhHHHHHHHHHHH
Q 008070 517 RYAGVLLGLSNTAGV 531 (579)
Q Consensus 517 ~~~g~~~g~~~~~~~ 531 (579)
+++|+.+|+.+...+
T Consensus 341 ~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 341 KFGATQMALLSSLSA 355 (356)
T ss_pred CccHHHHHHHHHHHh
Confidence 999999999887654
No 82
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.92 E-value=1.1e-22 Score=215.47 Aligned_cols=326 Identities=16% Similarity=0.175 Sum_probs=225.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhh----cCC-cHHHHHHHHHHHHHHHHHHhhhccC----HHHHHHHHHHHHhhh
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADK----FGG-KPVLGFGVIWWSVATVLTPVAARIG----LPFLLIMRAFMGIGE 275 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr----~Gr-r~~l~~~~~~~~~~~ll~~~a~~~~----~~~ll~~r~l~Gig~ 275 (579)
...++++..+..+...+..|+.|+++|| +|| |+.++++.+..+++.+++.+.++.+ ...+++.+++.+++.
T Consensus 34 ~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (437)
T TIGR00792 34 AAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFY 113 (437)
T ss_pred HHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH
Confidence 4556888888899999999999999998 677 4567788888888888887766321 456677888899998
Q ss_pred hchhhHHHHHHhccc-CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCcchHHHHhhHHHHHHHHHHHhh
Q 008070 276 GVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 276 g~~~~~~~~~i~~~~-~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-------~~gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
+...++..++..+.. ++++|++..++...+..+|.++++.+.+.+.. ..+||+.+++.+++.++..++.++.
T Consensus 114 ~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 114 SFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG 193 (437)
T ss_pred HhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888889999987 46899999999999999998887776665542 4689999999998888777766666
Q ss_pred hcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhh
Q 008070 348 AYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESG 427 (579)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g 427 (579)
.+|++++.++.++ ++......++.++++|.++.+++..++...+.+....+.+.|.+..++ ++...+
T Consensus 194 ~~e~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 260 (437)
T TIGR00792 194 TKERYSEIPKNIE------------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFS 260 (437)
T ss_pred CEecCCCCCcccc------------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHH
Confidence 6654422111000 000112346778899999988888888877777766666777766555 456677
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhh
Q 008070 428 LFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGL 507 (579)
Q Consensus 428 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.+.....++.+++.++.+++.||+|+|+....+. .+..++ .........+.+...+...+.+.+.... .+..
T Consensus 261 ~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 332 (437)
T TIGR00792 261 YMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGI--LLMVLG-----YLIFFFAGSNLPLILVLIILAGFGQNFV-TGLV 332 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHHH-----HHHHHHcchhHHHHHHHHHHHHHHHHHH-HHHH
Confidence 7777778999999999999999999987654332 111111 1111111112222222222222222222 2222
Q ss_pred hhh-cccc-------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 508 YSN-HQDI-------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 508 ~~~-~~~~-------~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
... .+.. +++.+|.++|+.+++..+|..+++.+.|.+.+..||.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 333 WALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 222 2222 3567899999999999999999999999999887663
No 83
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=8.7e-22 Score=205.24 Aligned_cols=342 Identities=13% Similarity=0.099 Sum_probs=230.6
Q ss_pred HHHHHH--HHHHHHHHhhhhhhh-hhhhhhcCCcHHHHHHHHHH-HHHHHHHH-hhhccC-HHHHHHHHHHHHhhhhchh
Q 008070 206 WVVVLL--CFSAFLLCNMDRIVG-GIWADKFGGKPVLGFGVIWW-SVATVLTP-VAARIG-LPFLLIMRAFMGIGEGVAM 279 (579)
Q Consensus 206 ~~v~~l--~~~~~~~~~l~~~~~-G~l~Dr~Grr~~l~~~~~~~-~~~~ll~~-~a~~~~-~~~ll~~r~l~Gig~g~~~ 279 (579)
..++++ ..+.++..++..|++ ++..||+|||+.+++...+. .+.....+ +....+ ..+++...++.++..+...
T Consensus 36 ~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d 115 (390)
T TIGR02718 36 TALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQD 115 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 344554 455677777777888 44789999998875555332 22222222 211102 3344555666777788888
Q ss_pred hHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhc
Q 008070 280 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR 359 (579)
Q Consensus 280 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~ 359 (579)
+...++..|..++++++...+....+..+|.++|+...+++.+.+|||..|++.+++.++..+..++..++++++++. .
T Consensus 116 ~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-~ 194 (390)
T TIGR02718 116 IATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEA-P 194 (390)
T ss_pred HHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-c
Confidence 899999999998888899999999999999999999999999999999999999988877666655554443221110 0
Q ss_pred HHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH-HHH
Q 008070 360 AEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMA 438 (579)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~ 438 (579)
.. ...++++++|+|.++...+..++..........+.+.|+.| .|+++++.|++.....+ ..+
T Consensus 195 ~~---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~ 258 (390)
T TIGR02718 195 LA---------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVL 258 (390)
T ss_pred hh---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHH
Confidence 00 01235678889988888888888888788888899999988 69999999998887764 666
Q ss_pred HHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhh-hhccccCC-
Q 008070 439 VFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLY-SNHQDIGP- 516 (579)
Q Consensus 439 ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 516 (579)
++.++.|++.||+++++....+. ....... .......................+.....+...+... ...+..++
T Consensus 259 ~g~~~~g~l~~r~g~~~~l~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 335 (390)
T TIGR02718 259 LGCGGGAWLVRRAGLWRTFILGV--GLAGSLA-LLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG 335 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHH--HHHHHHH-HHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 77899999999999987654321 1110111 1111100000111122222222222222222222222 23344555
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 008070 517 RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 517 ~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
+.+|+.+++.+...++|..++|.++|.++|..||...|.+.+++.+++.++
T Consensus 336 ~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 336 DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999888777766543
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.92 E-value=6.2e-22 Score=207.67 Aligned_cols=341 Identities=10% Similarity=0.045 Sum_probs=227.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC-cHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGG-KPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
...++++.+...+...++++++|.++||+|+ |+++.++.++..++..+..+.+ +++.+++.|++.|++.+...+...
T Consensus 37 ~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~ 114 (418)
T TIGR00889 37 GAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVT--TPAGMFPVLLANSLAYMPTIALTN 114 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHccHHHHHH
Confidence 4568899999999999999999999999965 7788888888888888888887 888999999999998887777766
Q ss_pred HHHhcc--------cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCC
Q 008070 284 NMLSKW--------IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKED 355 (579)
Q Consensus 284 ~~i~~~--------~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~ 355 (579)
++...+ .....|.+.+| .+|.++||++++.+.....|+ .|++.+++.++..++ .+..||.|+.+
T Consensus 115 ~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~ 186 (418)
T TIGR00889 115 SISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAK 186 (418)
T ss_pred HHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCc
Confidence 654322 22233444444 478889999998874333354 355666655555544 33455544221
Q ss_pred hhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCh--------hhhh
Q 008070 356 PELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNL--------TESG 427 (579)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~--------~~~g 427 (579)
++.+...++ ......+.++|+|.++.+.+..++..........+.+.|+++ .|.++ ...+
T Consensus 187 ~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g 254 (418)
T TIGR00889 187 STAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNAS 254 (418)
T ss_pred cccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHH
Confidence 111000000 001124457889998888888777766666667788888877 46543 5668
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc--hhHHHH-HHHHHHhhhhhhhh
Q 008070 428 LFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR--TPAMAV-LCMACSQGSDAFSQ 504 (579)
Q Consensus 428 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~ 504 (579)
...++..+..+++.++.|++.||+|+|+++..+. .+......+....... ..+..+ ..++.+.+......
T Consensus 255 ~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~-------~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~ 327 (418)
T TIGR00889 255 IWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSL-------VAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNI 327 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH-------HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999997544321 1111111111111111 122222 22223333222223
Q ss_pred hhhhhhccccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHHhc------CChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 505 SGLYSNHQDIGPRYAGVLLGLSN-TAGVLAGVFGTAATGYILQR------GSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~ig~~l~g~l~~~------~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.......+..|++.+|+++|+.+ ....+|.++||.++|++.|+ .||+.+|.+.+++.+++.++++++.++
T Consensus 328 ~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 328 SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33333455678899999999997 56789999999999999998 368999998888877777666665443
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.91 E-value=5.7e-22 Score=210.97 Aligned_cols=366 Identities=13% Similarity=0.063 Sum_probs=238.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhh-cCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
....+.....+...++.+++|+++|| +|||++++++.++.+++.++.++++ +++.+++.+++.|+|.|...+...++
T Consensus 49 ~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~ 126 (475)
T TIGR00924 49 QAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI--YPDLIFYGLGTIAVGSGLFKANPSSM 126 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc--cHhHHHHHHHHHHhccccccCCHHHH
Confidence 45666677777888889999999999 8999999999999999999999988 78888899999999999999999999
Q ss_pred HhcccCcCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhc---CCCCCChhhc
Q 008070 286 LSKWIPVSE---RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY---SSPKEDPELR 359 (579)
Q Consensus 286 i~~~~~~~~---r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~---~~~~~~~~~~ 359 (579)
+++++|+++ |+.+++++..+.++|.++||++++++.+.+||++.|++.++..++..+..+...+ +.++++.+.+
T Consensus 127 ~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (475)
T TIGR00924 127 VGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLS 206 (475)
T ss_pred HHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcc
Confidence 999998754 8889999999999999999999999999899999999877655444333333221 1111111111
Q ss_pred HHHHhhhh------------------cCCccc-------------------ccccchhHHHHhhchHHHHHHHHHHHHHH
Q 008070 360 AEEKRHIL------------------GGSISK-------------------EAVSVIPWKLILSKAPVWALIISHFCHNW 402 (579)
Q Consensus 360 ~~~~~~~~------------------~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 402 (579)
+++.+... ...... ...+.....+-.|...+..+++...+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~ 286 (475)
T TIGR00924 207 GQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWV 286 (475)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 11000000 000000 00000000111122234444555555566
Q ss_pred HHHHHHHHHHHHHHHhhCCChhh----hhHHhHHHHHHHHHHHHHHHHHhhhhhcc-----CcchHHHHHHHHHHHHHHH
Q 008070 403 GTFILLTWMPTYYNQVLKFNLTE----SGLFCVLPWLTMAVFANMGGWIADTLVSK-----GLSITAVRKIMQSIGFLGP 473 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~~g~s~~~----~g~~~~~~~~~~~ig~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~ 473 (579)
.+.-..+.++.+..+..+.+... .+++.++..+..++..++..++..|+.+| ..........+..++++..
T Consensus 287 ~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~ 366 (475)
T TIGR00924 287 LYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTF 366 (475)
T ss_pred HHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 66666667787777654433222 66777888887777777666555555543 1111111122222222222
Q ss_pred HHHHHHh---hccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 474 AFFLTQL---SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 474 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
.+..... ...+.++.+...++.+.+-....+.......+..|++.||+++|+......+|..+++.+.....+..++
T Consensus 367 ~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~ 446 (475)
T TIGR00924 367 AASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGV 446 (475)
T ss_pred HHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 2111010 1223344445555555555555555555566667889999999999999999999999999988887788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 551 DDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 551 ~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
...|...+++++++.++.++..+.
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 447 TGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888877777766665554
No 86
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.91 E-value=1.7e-21 Score=188.59 Aligned_cols=340 Identities=16% Similarity=0.208 Sum_probs=263.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
.-..+++..+..++..+.+++..+++.|+|.++.+..++++.+++.++-... +.+.++..-.+.|.|.+......++
T Consensus 46 ~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPs 122 (395)
T COG2807 46 FSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPS 122 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhH
Confidence 3456788888888888889999999999999999999999999999998776 3678999999999999999999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHH
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK 363 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~ 363 (579)
++-+.|| ++-+..+|+|.+...+|..+++.+...+.++. |||..+.+.+.++++.+++++....+ ++ ... ...
T Consensus 123 lIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r-~~-~~~--~~~- 196 (395)
T COG2807 123 LIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALR-EQ-AAS--IAT- 196 (395)
T ss_pred HHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccc-cc-ccc--ccc-
Confidence 9999995 88999999999999999999999999998877 79999999999998888777765311 11 000 000
Q ss_pred hhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHH
Q 008070 364 RHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 443 (579)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~ 443 (579)
+..+-..++++|.-|.+.+++.+..+.+|....|+|.++.| .|+++.++|.+.+...+..++..+.
T Consensus 197 -------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll 262 (395)
T COG2807 197 -------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALL 262 (395)
T ss_pred -------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHH
Confidence 00112337899999999999999999999999999999999 6999999999999999999999999
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhc-cccCCCchhHH
Q 008070 444 GGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNH-QDIGPRYAGVL 522 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~ 522 (579)
...+++|...++..... .........+.+. +.....+++.+ +.++.+.+..++..+.... ....++..+..
T Consensus 263 ~P~la~R~~n~r~~~~~-----~~~~~l~G~~G~~-~~P~~~~~lw~--~llG~G~G~~F~laL~li~~rs~~a~~Aa~L 334 (395)
T COG2807 263 IPLLARRSKNQRPLVVL-----ALLLMLVGLVGLL-LAPGQLPILWA--LLLGLGQGGAFPLALTLILLRSSDAAIAAAL 334 (395)
T ss_pred HHHHHHHhcccchHHHH-----HHHHHHHHHHHHH-HhhhhHHHHHH--HHHhCccchHHHHHHHHHHhhcCChHHHHHH
Confidence 99999987666654321 1111111111111 22233333332 3444444444444444433 33456888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 523 LGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 523 ~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
.|+.+.++++-.++||.+.|++.|. ++|...+.....+.++..++-+...|.+
T Consensus 335 SgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~ 388 (395)
T COG2807 335 SGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNR 388 (395)
T ss_pred HHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 9999999999999999999999998 7788888888777777766666655543
No 87
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.2e-21 Score=192.52 Aligned_cols=341 Identities=13% Similarity=0.133 Sum_probs=251.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH-hhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP-VAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~-~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
.-..++-+..+.++++..++.|++.+|+|+|+-+++|+.++++++.+.. .+...++..++++-++.|.|.+...++++.
T Consensus 48 ~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp 127 (422)
T COG0738 48 FEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANP 127 (422)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccch
Confidence 3456777778888888999999999999999999999999999999874 222226788999999999999999999999
Q ss_pred HHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-------------------cCcchHHHHhhHHHHHHHHHHH
Q 008070 285 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------------------FGWPSVFYSFGSLGSIWFALWL 345 (579)
Q Consensus 285 ~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~-------------------~gwr~~f~i~~~~~li~~~l~~ 345 (579)
+++.+.++++-.+.+++.+...++|.++||++++.++.. -.|+++|.+.+...+++.+...
T Consensus 128 ~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 128 YVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 999999998899999999999999999999999998762 1388888887777666555544
Q ss_pred hhh-cCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChh
Q 008070 346 KKA-YSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT 424 (579)
Q Consensus 346 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 424 (579)
... |+.++..++..+.. .....+++++|.++...+..|++-........|++.|+.+..|.+..
T Consensus 208 ~~k~p~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~ 272 (422)
T COG0738 208 LSKLPDLQVAAPSLGASG---------------SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ 272 (422)
T ss_pred hccCCcCCcccccccccc---------------cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH
Confidence 433 22222111111000 01356689999999999999999999999999999999998899999
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhh
Q 008070 425 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQ 504 (579)
Q Consensus 425 ~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (579)
++....+..+.+.++|++++.++..|+...|.+.. .++....++.. ....+..+.+.....++.+.....+
T Consensus 273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf--------~a~~~ill~~~-~~l~~g~v~~~~l~~ig~F~simfP 343 (422)
T COG0738 273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAF--------YALIAILLLLA-VALIGGVVALYALFLIGLFNSIMFP 343 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH--------HHHHHHHHHHH-HHHhcChHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999987764321 11111111111 1112234444444455555555555
Q ss_pred hhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 505 SGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 505 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+......+.++ ++ ....|....+..+|+++.|++.|++.|..|....+.....++.+-++.+.+..
T Consensus 344 TIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~~~~~~~ 409 (422)
T COG0738 344 TIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVLFFALIG 409 (422)
T ss_pred HHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 55555555555 33 33444445667889999999999999999888887755555555554444444
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.90 E-value=4.3e-21 Score=204.33 Aligned_cols=352 Identities=17% Similarity=0.158 Sum_probs=218.6
Q ss_pred HHHHHhhhhhhhhhhhhh-cCCcHHHHHHHHHHHHHHHHHHhhhccCHH-HHHHHHHHHHhhhhchhhHHHHHHhcccCc
Q 008070 215 AFLLCNMDRIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARIGLP-FLLIMRAFMGIGEGVAMPAMNNMLSKWIPV 292 (579)
Q Consensus 215 ~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~-~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~ 292 (579)
.....++..+++|+++|| +|||++++++.+++.++.++++++. +.. .+++.|+++|+|.|...+...+++.|++|+
T Consensus 59 ~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~--~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~ 136 (489)
T PRK10207 59 FAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL--LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPP 136 (489)
T ss_pred HHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHhccccccCCHHHHHHHhcCC
Confidence 333444455789999999 9999999999999999999999987 433 455899999999999999999999999987
Q ss_pred C--chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCC----CChhhcHHHHhhh
Q 008070 293 S--ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK----EDPELRAEEKRHI 366 (579)
Q Consensus 293 ~--~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~----~~~~~~~~~~~~~ 366 (579)
+ +|+++++++..+.++|..+||.+++++.+++|||+.|++.++. ++..++.+...++..+ +..+...+.....
T Consensus 137 ~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 215 (489)
T PRK10207 137 KDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMVKDIGSEPDHKPMSFSKLL 215 (489)
T ss_pred CchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhhcccCCCCCccchhhhhHH
Confidence 6 4578999999999999999999999999999999999986543 3323322222221110 1101000000000
Q ss_pred ---------------hcCCccccc---------------ccchhHHHHhhchHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 008070 367 ---------------LGGSISKEA---------------VSVIPWKLILSKAPVWALIIS--HFCHNWGTFILLTWMPTY 414 (579)
Q Consensus 367 ---------------~~~~~~~~~---------------~~~~~~~~l~~~~~~~~~~l~--~~~~~~~~~~~~~~~p~~ 414 (579)
......... .........+|++.+....+. ..+.+..+....+.++.|
T Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~ 295 (489)
T PRK10207 216 LVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFF 295 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHH
Confidence 000000000 000000124455554433322 333444445555677778
Q ss_pred HHHhhCCCh----hhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCc-------chHHHHHHHHHHHHHHHHHHHH-Hh-h
Q 008070 415 YNQVLKFNL----TESGLFCVLPWLTMAVFANMGGWIADTLVSKGL-------SITAVRKIMQSIGFLGPAFFLT-QL-S 481 (579)
Q Consensus 415 l~~~~g~s~----~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~-~ 481 (579)
.++..+.+. .....+.....+..++..++.+++.||+++|+. +..+. .+..++++....... .. .
T Consensus 296 ~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~--~l~~~~~~~~~~~~~~~~~~ 373 (489)
T PRK10207 296 AINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGM--FLCSLGFLTAAAAGMWFADA 373 (489)
T ss_pred HHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHH--HHHHHHHHHHHHHHHhhcCC
Confidence 775333211 012334444556666778888999999998863 22222 222222222111111 11 1
Q ss_pred --ccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCC
Q 008070 482 --HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ----------RGS 549 (579)
Q Consensus 482 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~----------~~g 549 (579)
..+.++.+...++.+.+.....++......+..|++.+|.++|+.+....+|+.++..+...... ...
T Consensus 374 ~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~ 453 (489)
T PRK10207 374 QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPV 453 (489)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhh
Confidence 12234444455556666666666667777778899999999999999999999999888876531 113
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 008070 550 WDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+...|...++..+++.+++++.
T Consensus 454 ~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 454 YTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777766666555553
No 89
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=8.3e-20 Score=192.12 Aligned_cols=358 Identities=16% Similarity=0.115 Sum_probs=264.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHH-HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNN 284 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~ 284 (579)
-......++..+...+..|+.|.++|+.|+||.++ +..++..+++.++.+.+..+++..++.-++.-++.+......++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456777788888888899999999998776644 44555556666666654335666667777777888888999999
Q ss_pred HHhcccCcCch--------------------------hHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cCcchHH
Q 008070 285 MLSKWIPVSER--------------------------SRSLAFVYSGMYLGSVTGLAVSPILIQK--------FGWPSVF 330 (579)
Q Consensus 285 ~i~~~~~~~~r--------------------------~~~~g~~~~~~~lG~~lgp~i~~~l~~~--------~gwr~~f 330 (579)
++.++.+++++ ++..+.-.....+|.++.-++.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999998888899998887776655422 2358888
Q ss_pred HHhhHHHHHHHHHHHhhhcCCCCCCh-hhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 008070 331 YSFGSLGSIWFALWLKKAYSSPKEDP-ELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT 409 (579)
Q Consensus 331 ~i~~~~~li~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 409 (579)
.+.++.-++..+..++..|++|+... +........- -++-...++++.+.|.+..+++..+++.-+..++..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g-------~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFG-------FKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHH-------HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888887765211 1111100000 001113467778889999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhcc--CcchHHHHHHHHHHHHHHHHHHHH-----Hhhc
Q 008070 410 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK--GLSITAVRKIMQSIGFLGPAFFLT-----QLSH 482 (579)
Q Consensus 410 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 482 (579)
....|.++++|++..+...+..+..+.+++|.++.|++.||+|.| +++.... ....++....++ ....
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l-----~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL-----ILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH-----HHHHHHHHHHHHHhhhcccCc
Confidence 999999999999999999999999999999999999999999998 5543221 111111111111 1122
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Q 008070 483 VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-WDDVFKVAVVLY 561 (579)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g-~~~~~~~~~~~~ 561 (579)
.+.+...++.+..+.+.+......-..+.+.+|+++.+..+|++.+.....+.+||++.|.+.+..| .+..+....++.
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 3334444444555555555555566667777899999999999999999999999999999999865 889999999999
Q ss_pred HHHHHHHHHhhcCc
Q 008070 562 IIGTLVWNLFATGE 575 (579)
Q Consensus 562 ~l~~~~~~~~~~~~ 575 (579)
+++++++..+..++
T Consensus 458 ~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 458 LIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHhhccchh
Confidence 99988887775544
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=1.3e-20 Score=199.47 Aligned_cols=314 Identities=16% Similarity=0.186 Sum_probs=211.9
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY 303 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~ 303 (579)
++.|+++|.||||++++.+.++..+|.++++-++ |...++.+..+.|+|.|.... ....++|..|.|.|....++..
T Consensus 96 ~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~ 172 (599)
T PF06609_consen 96 PFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIAS 172 (599)
T ss_pred HhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHH
Confidence 8999999999999999999999999999999999 899999999999999876654 4566899999999988887777
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCC--hh-hcHHH-Hhhh-h-----------
Q 008070 304 SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKED--PE-LRAEE-KRHI-L----------- 367 (579)
Q Consensus 304 ~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~--~~-~~~~~-~~~~-~----------- 367 (579)
...-+....++.++..+..+.+|||.|++.+++..+.+++.+++..+++++. .+ ....+ -.+. .
T Consensus 173 ~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~ 252 (599)
T PF06609_consen 173 IPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLA 252 (599)
T ss_pred HHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHH
Confidence 6666666678888887777789999999998887776555444333222111 11 11111 0000 0
Q ss_pred --------cCCc--------------------------c---cccccchhHHHHhhc-hHHHHHHHHHHHHHHHHHHHHH
Q 008070 368 --------GGSI--------------------------S---KEAVSVIPWKLILSK-APVWALIISHFCHNWGTFILLT 409 (579)
Q Consensus 368 --------~~~~--------------------------~---~~~~~~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~~ 409 (579)
.... + ..+.+..|.+ ++++ +.+...++..++....++....
T Consensus 253 LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~-Lf~~~r~~~~~lvi~fi~G~~~~s~~~ 331 (599)
T PF06609_consen 253 LFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHR-LFKDRRGFAALLVISFISGMNFFSVNI 331 (599)
T ss_pred HHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHH-HhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 0100 0 0112233444 6666 5566667777777777888888
Q ss_pred HHHHHHHHhhCCChh---hhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 008070 410 WMPTYYNQVLKFNLT---ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 486 (579)
Q Consensus 410 ~~p~~l~~~~g~s~~---~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (579)
+.|......++-++. ..++.....+++..+|.++.|.+..++++.|...+.. .+.+......+......+..
T Consensus 332 l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~-----~~~~ta~~Gama~~~~~n~~ 406 (599)
T PF06609_consen 332 LWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFG-----SVLMTAFCGAMAAVRPDNKN 406 (599)
T ss_pred HHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHH-----HHHHHHHHHHHHHccCCCcc
Confidence 889888877776653 5677778888889999999999999888776543211 11111111111122222222
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 487 AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
......++.+.+.+....+......-..|+++.|++.|+...++.+|+.+|..+...++.
T Consensus 407 ~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 407 AAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 223333333444444444444444445788999999999999999999999988866654
No 91
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.89 E-value=4.4e-22 Score=217.71 Aligned_cols=241 Identities=15% Similarity=0.171 Sum_probs=185.9
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhh------------------------------------
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA------------------------------------ 257 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~------------------------------------ 257 (579)
...++..+..++.|++.||+|||+++.++.++++++.+++++.+
T Consensus 76 ~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 155 (633)
T TIGR00805 76 SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRP 155 (633)
T ss_pred hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccc
Confidence 33444445559999999999999999999999999999988763
Q ss_pred -------------ccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008070 258 -------------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF 324 (579)
Q Consensus 258 -------------~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~ 324 (579)
+..+..++++|+++|+|.+..++...+++.|++|+++|+++++++..+..+|.++|+++++++.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 156 TQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred cccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 1125567899999999999999999999999999999999999999999999999999999987643
Q ss_pred ----------------------CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhc--HHHHhhhhc-CCcc------c
Q 008070 325 ----------------------GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR--AEEKRHILG-GSIS------K 373 (579)
Q Consensus 325 ----------------------gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~------~ 373 (579)
+|+..|++.+++.++..+++++++++.|+...+.+ ..+...... .... .
T Consensus 236 ~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (633)
T TIGR00805 236 VDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDI 315 (633)
T ss_pred cccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhh
Confidence 26777888888877766655555444343211111 000000000 0000 0
Q ss_pred ccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH-HHHHHHHHHHHHhhhhh
Q 008070 374 EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLV 452 (579)
Q Consensus 374 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~g~l~dr~g 452 (579)
.......++.++++|.++...+..++.....+++.+|+|.|+++.+|+++.+++++..+..+ +.+++.+++|++.||++
T Consensus 316 ~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~ 395 (633)
T TIGR00805 316 TKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFK 395 (633)
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeec
Confidence 01112346778999999999999999999999999999999999999999999999887776 56889999999999998
Q ss_pred cc
Q 008070 453 SK 454 (579)
Q Consensus 453 ~~ 454 (579)
.+
T Consensus 396 ~~ 397 (633)
T TIGR00805 396 LN 397 (633)
T ss_pred cc
Confidence 54
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=7.5e-21 Score=204.86 Aligned_cols=365 Identities=14% Similarity=0.095 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
....++.+...++..++.++.|+++|++|||+.++++.+++.++.+++++++ ++++++++|+++|+|.|........+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhh
Confidence 3457788888889999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh-cHHHH
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL-RAEEK 363 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~-~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~-~~~~~ 363 (579)
++|..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. +++.||+|+.--+. +.++.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 99999999999999999999999999996555554432 48999999888888887777 77777777532111 01000
Q ss_pred ----hhhhcCCcccc-----------------cccchhHHHHh----hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 364 ----RHILGGSISKE-----------------AVSVIPWKLIL----SKAPVWALIISHFCHNWGTFILLTWMPTYYNQV 418 (579)
Q Consensus 364 ----~~~~~~~~~~~-----------------~~~~~~~~~l~----~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~ 418 (579)
.........+. ......++.++ +++.++...+..+....+......|.+.+++.
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~- 324 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS- 324 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence 00011000000 00000122222 23344556666666666667777888888877
Q ss_pred hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh---ccchhH--HHHHHH
Q 008070 419 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS---HVRTPA--MAVLCM 493 (579)
Q Consensus 419 ~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~ 493 (579)
.|.+... .....+.++..+++.++..++.||+|||+++..+...+.++..++.......... .....+ +...++
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCL 403 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHH
Confidence 4666443 4445566777788888889999999999888776533333333332222221111 111122 222223
Q ss_pred HHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-HHHHhh
Q 008070 494 ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTL-VWNLFA 572 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~-~~~~~~ 572 (579)
....+..+..+.......+.+|.+.|+++.++...+..+...+-....-.+.+..+....|.+.+.++.+..+ ..++..
T Consensus 404 ~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~ 483 (513)
T KOG0254|consen 404 FIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFV 483 (513)
T ss_pred HHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEc
Confidence 3333333333444434556677799999999999999988888777776666665434444444444444444 344444
Q ss_pred cCc
Q 008070 573 TGE 575 (579)
Q Consensus 573 ~~~ 575 (579)
++.
T Consensus 484 pET 486 (513)
T KOG0254|consen 484 PET 486 (513)
T ss_pred ccC
Confidence 433
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=4.6e-19 Score=191.85 Aligned_cols=349 Identities=13% Similarity=0.047 Sum_probs=223.6
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHH
Q 008070 203 PKRWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 203 ~~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
...+...+..++.+++..++.+++|+++||+|||+++++++++..++.++.++++ |++.+++.|++.|++.+......
T Consensus 115 ~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 115 DSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred CcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccchhHHh
Confidence 4678888999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhc---
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR--- 359 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~--- 359 (579)
..++.|++++++|+.+..+ ......++.+++++++++.. +|||.+++..+..++.+++ +++.+|.|+......
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~ 268 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRID 268 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchH
Confidence 9999999999999999999 88888888888888888887 8999999999888876666 555556664211110
Q ss_pred --HHHHhhhhc----CCc---------------ccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 360 --AEEKRHILG----GSI---------------SKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV 418 (579)
Q Consensus 360 --~~~~~~~~~----~~~---------------~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~ 418 (579)
.+..+...+ ... .....+...+..+++.|.+....+...+..+.......-++.....
T Consensus 269 ~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~- 347 (521)
T KOG0255|consen 269 EAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSG- 347 (521)
T ss_pred HHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhh-
Confidence 000000000 000 0000111335566677655444444444443332222223333332
Q ss_pred hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhh
Q 008070 419 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQG 498 (579)
Q Consensus 419 ~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (579)
+|.+.. ......+.....+....+...|++|||.....+. .+..++++..++ .......++......++.+
T Consensus 348 lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 418 (521)
T KOG0255|consen 348 LGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSL--FLAGIGLLLFGW----LPDDLGGWLHWILPLLGKF 418 (521)
T ss_pred cCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHH--HHHHHHHHHHHH----hhccchhHHHHHHHHHHHH
Confidence 454433 3333444466667777789999998885443221 111111111111 1111110122222222222
Q ss_pred hhhh-hhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 008070 499 SDAF-SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 499 ~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~ 568 (579)
.... .........+..|...|..+.+.......++.+++|.+.-.... ......+...+.+..+..++.
T Consensus 419 ~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 488 (521)
T KOG0255|consen 419 FIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLS 488 (521)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHH
Confidence 2222 23333334555677889999999999999999999998865544 222222222344444444444
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=5.7e-20 Score=176.83 Aligned_cols=349 Identities=17% Similarity=0.179 Sum_probs=217.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcc
Q 008070 210 LLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 289 (579)
Q Consensus 210 ~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 289 (579)
++....+.+..+++..+|.++|++|||+.+.+..+..++..++.+.++ |+..+++.|.+.|+|.|+ .|...++-.+.
T Consensus 117 llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~ 193 (528)
T KOG0253|consen 117 LLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEF 193 (528)
T ss_pred HHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHh
Confidence 444455666777779999999999999999999999999999999999 899999999999999998 88888999999
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcH-----HHHh
Q 008070 290 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA-----EEKR 364 (579)
Q Consensus 290 ~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~-----~~~~ 364 (579)
.|..+|...+-.. ..+.+|.+....+.-.++.++||||........ +..++...+..+|+|+-.-.... +..+
T Consensus 194 lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~p-l~~~a~f~~w~~ESpRf~~~~G~~~kAletL~ 271 (528)
T KOG0253|consen 194 LPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTP-LMFAARFLVWVYESPRFYLAKGDDYKALETLH 271 (528)
T ss_pred ccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhH-HHHHHHHHhhcccCcchhhhcCChHHHHHHHH
Confidence 9988898877766 899999999999999999999999988877744 44455566667777752211100 0000
Q ss_pred hhhc--C--------------------------CcccccccchhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 365 HILG--G--------------------------SISKEAVSVIPWKLILS---KAPVWALIISHFCHNWGTFILLTWMPT 413 (579)
Q Consensus 365 ~~~~--~--------------------------~~~~~~~~~~~~~~l~~---~~~~~~~~l~~~~~~~~~~~~~~~~p~ 413 (579)
++.+ + .....+........++. ++..+.+....|...+.+|+.......
T Consensus 272 kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLltte 351 (528)
T KOG0253|consen 272 KIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTE 351 (528)
T ss_pred HHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 0000 0 00000111112222221 122233333444444445444333333
Q ss_pred HHHHh-----------------hC--CChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHH
Q 008070 414 YYNQV-----------------LK--FNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPA 474 (579)
Q Consensus 414 ~l~~~-----------------~g--~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 474 (579)
..+.. .+ .+...--.-..+..+....|.++.++++||+|||+.+. ..++..+
T Consensus 352 lfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMa---------l~l~~f~ 422 (528)
T KOG0253|consen 352 LFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMA---------LSLILFG 422 (528)
T ss_pred HHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHH---------HHHHHHH
Confidence 32221 00 01111112234556788899999999999999997432 2222222
Q ss_pred HHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 008070 475 FFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP-RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDV 553 (579)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~ 553 (579)
++++............+..+.+-++........+.+..++.| ..|+++.|....+..+|+++.|+++ +....+....
T Consensus 423 iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~ 500 (528)
T KOG0253|consen 423 IFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLP 500 (528)
T ss_pred HHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeeh
Confidence 222222111111122222223333333444555555555555 8899999999999999999999998 4333444555
Q ss_pred HHHHHHHHHHHHHHHHHhhcC
Q 008070 554 FKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 554 ~~~~~~~~~l~~~~~~~~~~~ 574 (579)
..+.+++++++.++..++.-+
T Consensus 501 i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 501 IFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred HHHHHHHHHHHHHHheeeeec
Confidence 556666666666665555443
No 95
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.87 E-value=1.7e-19 Score=181.05 Aligned_cols=276 Identities=11% Similarity=0.030 Sum_probs=195.0
Q ss_pred CHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc----------------
Q 008070 260 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK---------------- 323 (579)
Q Consensus 260 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~---------------- 323 (579)
+++.+++.-++.|.|.+...+..+.++++..++|++++.+++.+...++|.+++|++++.++..
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 6899999999999999999999999999999999999999999999999999999999988732
Q ss_pred cCcchHHHHhhHHHHHHHHHHHhhh-cCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHH
Q 008070 324 FGWPSVFYSFGSLGSIWFALWLKKA-YSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 402 (579)
Q Consensus 324 ~gwr~~f~i~~~~~li~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 402 (579)
..|+++|++.+.+.++..+++.+.. |+.++++ .++... ++. ...+.++++|.++...+..+++..
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~---~~~~~~--------~~~---~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD---VARVSS--------GDT---TQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc---cccccc--------ccc---cchhhHHhhHHHHHHHHHHHHHHH
Confidence 4699999977777655554444332 2211111 000000 000 012236778888888888888888
Q ss_pred HHHHHHHHHHHHHHHh--hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 008070 403 GTFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL 480 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (579)
...++..|++.|+.+. +|+++.+.+...+...++.++|+++.+++.||+++++.+..+. .+..+.. .+...
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~-----~l~~~~~--~l~~~ 227 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA-----FLAVLLS--IGAAL 227 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH-----HHHHHHH--HHHHH
Confidence 8999999999999864 6999999999999999999999999999999999887543221 1111111 11111
Q ss_pred hccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 008070 481 SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVL 560 (579)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~ 560 (579)
.. ..........++.+.....+.......+.. +++.+++.++. .+..+|++++|++.|.+.|..|.+.+|++..++
T Consensus 228 ~~--~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~-~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 228 TH--GYVAMWFVLALGLFNSIMFPTIFSLALNAL-GRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred cC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 11 122222333444444444444444444443 44566777775 677899999999999999998988887754433
No 96
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=2e-18 Score=183.01 Aligned_cols=322 Identities=15% Similarity=0.121 Sum_probs=209.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhh----cCC-cHHHHHHHHHHHHHHHHHHhhhccC----HHHHHHHHHHHHhhh
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADK----FGG-KPVLGFGVIWWSVATVLTPVAARIG----LPFLLIMRAFMGIGE 275 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr----~Gr-r~~l~~~~~~~~~~~ll~~~a~~~~----~~~ll~~r~l~Gig~ 275 (579)
...++.+..+..+...+..|+.|+++|| +|| |+.++++.+..+++.++....+..+ +..+++..++.+++.
T Consensus 44 ~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~ 123 (444)
T PRK09669 44 AAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVY 123 (444)
T ss_pred HHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH
Confidence 3456777888888888999999999998 777 4567778788877776665554211 355666677778777
Q ss_pred hchhhHHHHHHhccc-CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCcchHHHHhhHHHHHHHHHHHhh
Q 008070 276 GVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 276 g~~~~~~~~~i~~~~-~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-------~~gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
+....+..++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..+|+..+.+.+++.++..++.++.
T Consensus 124 t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 124 TAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred HhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 778888889999998 46889999999988888888887765554432 2468888888887777766655555
Q ss_pred hcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhh
Q 008070 348 AYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESG 427 (579)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g 427 (579)
.+|++++.++. +......++.+++|+.++.+++..++............+.|.+...+ ++...+
T Consensus 204 ~~e~~~~~~~~---------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~ 267 (444)
T PRK09669 204 TKERYTPEVDN---------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLAT 267 (444)
T ss_pred eEEecCCCCcC---------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHH
Confidence 44432211100 01112356778899999988887777666665555555555554443 333444
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHhhhhhhhhhh
Q 008070 428 LFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA-MAVLCMACSQGSDAFSQSG 506 (579)
Q Consensus 428 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 506 (579)
.+.....+..+++.++.+++.||+|+|+....+. +........+.... ....+ ..+...+.+.+.. ...+.
T Consensus 268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~i~g~~~~-~~~~~ 339 (444)
T PRK09669 268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTI------VAFVILSALIFFIP-PSNVWLIFALNILFNFIQN-LTTPL 339 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH------HHHHHHHHHHHHhC-cchHHHHHHHHHHHHHHHH-HHHHH
Confidence 4555556778888889999999999987544321 11111111111122 22233 2222233333332 33333
Q ss_pred hhhhcccc--------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 507 LYSNHQDI--------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 507 ~~~~~~~~--------~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
......++ ..+..|..+|+.+++..+|.++|+.+.|.+.+..||
T Consensus 340 ~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 340 QWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33333222 234568889999999999999999999999998776
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.84 E-value=5.4e-18 Score=181.54 Aligned_cols=343 Identities=16% Similarity=0.145 Sum_probs=199.6
Q ss_pred hhhhhhhhhh-cCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCc--hhHHH
Q 008070 223 RIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE--RSRSL 299 (579)
Q Consensus 223 ~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~--r~~~~ 299 (579)
.+++|+++|| +|||++++++.++.+++.++++++++ +.+.+++.++++|++.|...+...+++.+++|+++ |..++
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~ 152 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAF 152 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcc
Confidence 3689999999 59999999999999999999988752 45667788999999999999999999999997543 45688
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHH---HHHhhhcCCCCCChh--hcHHHHh----------
Q 008070 300 AFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA---LWLKKAYSSPKEDPE--LRAEEKR---------- 364 (579)
Q Consensus 300 g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~---l~~~~~~~~~~~~~~--~~~~~~~---------- 364 (579)
+++..+.++|..+||++++++.+.+|||+.|++.++..++..+ ......++..++... .+.....
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALI 232 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987754444332 222233332111110 0000000
Q ss_pred ----hhhcCCccccc-----------c---cchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhCCCh-
Q 008070 365 ----HILGGSISKEA-----------V---SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ--VLKFNL- 423 (579)
Q Consensus 365 ----~~~~~~~~~~~-----------~---~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~--~~g~s~- 423 (579)
........... . ......+.- +++.+..++ .++....++......+.++.. ....+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~ 310 (500)
T PRK09584 233 AIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAA-RRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHS 310 (500)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHH-HHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhcccc
Confidence 00000000000 0 000001111 222222222 223334444555555555443 111221
Q ss_pred -----hhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh--------ccchhHHHH
Q 008070 424 -----TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS--------HVRTPAMAV 490 (579)
Q Consensus 424 -----~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 490 (579)
...+++.++..+..++..++.+++-+|.++|.... ..+..+..+...++...... ..+.++.+.
T Consensus 311 ~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~---~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~ 387 (500)
T PRK09584 311 ILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMP---HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIA 387 (500)
T ss_pred ccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHH
Confidence 12455666666666677666666666665542111 11222222222222221111 112335555
Q ss_pred HHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCChHHHHHHHHHH
Q 008070 491 LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ----------RGSWDDVFKVAVVL 560 (579)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~----------~~g~~~~~~~~~~~ 560 (579)
...+.+.+.....+.......+..|++.||+++|+......+|..++..+.+.... ..++...|...++.
T Consensus 388 ~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 467 (500)
T PRK09584 388 SYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIA 467 (500)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHH
Confidence 55556666666666666666677888999999998776666666666665543221 12477888888877
Q ss_pred HHHHHHHHHHh
Q 008070 561 YIIGTLVWNLF 571 (579)
Q Consensus 561 ~~l~~~~~~~~ 571 (579)
.++..++++++
T Consensus 468 ~~~~a~~~~~~ 478 (500)
T PRK09584 468 TAVIAVLMLLT 478 (500)
T ss_pred HHHHHHHHHHH
Confidence 66555444443
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.84 E-value=8.1e-18 Score=173.83 Aligned_cols=344 Identities=14% Similarity=0.156 Sum_probs=230.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhcC-CcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHH
Q 008070 204 KRWVVVLLCFSAFLLCNMDRIVGGIWADKFG-GKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 204 ~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~G-rr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
..+.++.+.++..+...+..+++|.++||++ +|+++.+..++.++..++....+ +++.+++..++..+......|..
T Consensus 35 s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~--~f~~~~~~~~l~~~~~~p~~pl~ 112 (400)
T PF03825_consen 35 SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS--SFWWLFVIMLLFSFFFSPTMPLS 112 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHccHHHHH
Confidence 4577899999999999999999999999986 56777777777777776677776 78888888888888888888999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHH-HHHhhcccC---cchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV-SPILIQKFG---WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i-~~~l~~~~g---wr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
.++.-+... +++.-.|......++|.+++... ++.+....+ ..+.+++.+...++.....+ ..|+.|.++...
T Consensus 113 dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~ 189 (400)
T PF03825_consen 113 DSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAK 189 (400)
T ss_pred HHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-hCCCCccccccC
Confidence 998888874 45566777777788888777554 233333333 23455555555444333333 344444221111
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMA 438 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ 438 (579)
...++ ....+..+++|+|+++.+.+..++..........+.+.|+++..|.+....+.+.++..++.+
T Consensus 190 ~~~~~------------~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi 257 (400)
T PF03825_consen 190 ESVKK------------LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEI 257 (400)
T ss_pred CCccc------------ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHH
Confidence 10000 011123458999999999999999998999999999999999534777888888888888999
Q ss_pred HHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHH----HHHhhhhhhhhhhhhhhcc
Q 008070 439 VFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV--RTPAMAVLCM----ACSQGSDAFSQSGLYSNHQ 512 (579)
Q Consensus 439 ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 512 (579)
+.-.+.+++.+|+|.++++ .++.+..++-....... +.+....... .-+...............+
T Consensus 258 ~~f~~~~~~~~r~g~~~ll---------~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~ 328 (400)
T PF03825_consen 258 PFFFFSGRFLKRFGIKWLL---------LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDR 328 (400)
T ss_pred HHHHHHHHHHHhcCHHHHH---------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999988543 23333333332222222 2222222111 1233333334444444556
Q ss_pred ccCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHhcCChHH------HHHHHHHHHHHHHHHHHHhhc
Q 008070 513 DIGPRYAGVLLGLSNTA-GVLAGVFGTAATGYILQRGSWDD------VFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 513 ~~~~~~~g~~~g~~~~~-~~lg~~ig~~l~g~l~~~~g~~~------~~~~~~~~~~l~~~~~~~~~~ 573 (579)
..|++.++++.|+++.. ..+|..+|..++|+++|+.|.+. .+.+.+++.++..+++.++-|
T Consensus 329 ~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 329 IAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred hCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 67889999999998876 57899999999999999876553 445555555555544444433
No 99
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.84 E-value=6.6e-19 Score=179.32 Aligned_cols=348 Identities=12% Similarity=0.081 Sum_probs=231.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
...+....+..+.+..+++|+++||+|.|+++.++.+.+++..+++++++ ++..+.+.|++.|++.|... +...++.
T Consensus 64 ~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~L~i~R~llGvaEA~~~-A~~syI~ 140 (511)
T TIGR00806 64 TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWHMQLMEVFYSVTMAARI-AYSSYIF 140 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 56777778888888999999999999999999999999999999999998 89999999999999999999 9999999
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhh--HHHHHHHHHHHhhhcCCCCC-----Chhhc-
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG--SLGSIWFALWLKKAYSSPKE-----DPELR- 359 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~--~~~li~~~l~~~~~~~~~~~-----~~~~~- 359 (579)
.|+|+++|+++.++...+..+|.+++++++++ +..+|||+-+.+.- +...+..+++.+++|..++. .+..+
T Consensus 141 ~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~ 219 (511)
T TIGR00806 141 SLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRG 219 (511)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhcccccccc
Confidence 99999999999999999999999999999999 55689998655432 22223333333444433221 00000
Q ss_pred --HHHHhhhhcC-C--ccc--cc-------ccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhh
Q 008070 360 --AEEKRHILGG-S--ISK--EA-------VSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE 425 (579)
Q Consensus 360 --~~~~~~~~~~-~--~~~--~~-------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 425 (579)
..+.+....+ . ..+ +. .-...++...+|+.++...+-..+...+++-+.+|......+..+-.+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~y 299 (511)
T TIGR00806 220 ALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKY 299 (511)
T ss_pred ccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCcccc
Confidence 0000000000 0 000 00 01123455577888888888888888888888888887777653322235
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhh
Q 008070 426 SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQS 505 (579)
Q Consensus 426 ~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (579)
-|..-++..+.+.+..+..|++-.++.+... +.+.+..++-+..++.....++.++..+.+++......+..+
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~-------l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flit 372 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSK-------LLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVP 372 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHH-------HHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 6777788888888899999998555433211 333344344444455555666777776666665555554444
Q ss_pred hhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHH----HHHHhc----CChHHHHHHHHHHHHHHHH
Q 008070 506 GLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT----GYILQR----GSWDDVFKVAVVLYIIGTL 566 (579)
Q Consensus 506 ~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~----g~l~~~----~g~~~~~~~~~~~~~l~~~ 566 (579)
.... +...+..+..|-.+|+++++..+-..+-..+. |.-.+. .=|..-|.+.+++.++..+
T Consensus 373 ia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 373 IATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 4333 55556677779999998877666555544332 221111 1244455555655555544
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.84 E-value=6.9e-18 Score=176.52 Aligned_cols=362 Identities=13% Similarity=0.069 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhh----hcCCcHHHHHH-HHHHHHHHHHHHhhhccCH-----------------HH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWAD----KFGGKPVLGFG-VIWWSVATVLTPVAARIGL-----------------PF 263 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~~ll~~~a~~~~~-----------------~~ 263 (579)
..+..+..+..+...+.+|+.|+++| |+|||+.++++ .+...++.+++++++ +. +.
T Consensus 39 ~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~--~~~~~~~~~~~~~~~~~~i~~ 116 (477)
T TIGR01301 39 AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAA--DIGHLFGDNLDKKTKPRAIIV 116 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCc--hhhhhccccccccchhHHHHH
Confidence 45566666777888888999999999 59999987764 666677777777766 32 22
Q ss_pred HHHHHHHHHhhhhchhhHHHHHHhcccCcCch--hHHHHHHHHHHHHHHHHHHHHHHHh--hccc-------------Cc
Q 008070 264 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER--SRSLAFVYSGMYLGSVTGLAVSPIL--IQKF-------------GW 326 (579)
Q Consensus 264 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r--~~~~g~~~~~~~lG~~lgp~i~~~l--~~~~-------------gw 326 (579)
++++-.+..++.....++..++++|.+|+++| +.++++.+.+.++|.++|+.++++. ...+ +.
T Consensus 117 ~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (477)
T TIGR01301 117 FVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANL 196 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchH
Confidence 23333445567788888999999999998765 6899999999999999999999875 2211 56
Q ss_pred chHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhh-----chHHHHHHHHHHHHH
Q 008070 327 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILS-----KAPVWALIISHFCHN 401 (579)
Q Consensus 327 r~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~~~~ 401 (579)
++.|++.+++.++..++..+..+|.|...++...+++. +. .++......++++++ .+.++.+++..++.+
T Consensus 197 ~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW 271 (477)
T TIGR01301 197 KSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEA---AP--PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNW 271 (477)
T ss_pred HHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhc---cc--ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 88999988888888888888887765422211110000 00 000001112333332 366899999999999
Q ss_pred HHHHHHHHHHHHHHHH-hhCCChh------h----hhHHhHHHHHHHHHHHHHHHHHhhhhhc-cCcchHHHHHHHHHHH
Q 008070 402 WGTFILLTWMPTYYNQ-VLKFNLT------E----SGLFCVLPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIG 469 (579)
Q Consensus 402 ~~~~~~~~~~p~~l~~-~~g~s~~------~----~g~~~~~~~~~~~ig~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~ 469 (579)
++++.+..|.+.|..+ .++-++. + ..+......+...+.+++..++.+|+|+ |+....+. .+.+++
T Consensus 272 ~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~--~~~~~~ 349 (477)
T TIGR01301 272 IAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVN--IILAIC 349 (477)
T ss_pred HHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH--HHHHHH
Confidence 9999999999888764 4554321 1 1233444555556777788889999985 43323221 222222
Q ss_pred HHHHHHHHHHhh---c----------c-c-hhHHHHHHHHHHhhhhhhhhhhhhhhccccCC--CchhHHHHHHHHHHHH
Q 008070 470 FLGPAFFLTQLS---H----------V-R-TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP--RYAGVLLGLSNTAGVL 532 (579)
Q Consensus 470 ~~~~~~~~~~~~---~----------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~l 532 (579)
+....+.-.... . . . ....++.+..+|...............+..++ +..|..+|+.|.+..+
T Consensus 350 l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l 429 (477)
T TIGR01301 350 LAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI 429 (477)
T ss_pred HHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH
Confidence 222211110000 0 0 0 13333444444444444444444445555563 5669999999999999
Q ss_pred HHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 008070 533 AGVFGTAATGYILQRG--SWDDVFKVAVVLYIIGTLVWNLFATGER 576 (579)
Q Consensus 533 g~~ig~~l~g~l~~~~--g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 576 (579)
.+.+.....|.+.+.. +...++.+.++.++++.++.++..++.+
T Consensus 430 pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 430 PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999866653 4667788888888888887777666544
No 101
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.5e-20 Score=186.53 Aligned_cols=355 Identities=14% Similarity=0.119 Sum_probs=233.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccC-----HHHHHHHHHHHHhhhhchhhH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIG-----LPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~-----~~~ll~~r~l~Gig~g~~~~~ 281 (579)
....+...++++..+++++.|++.||+|||+++...++++.++++++++....+ ++++.+.|++.|+|.|+.+|.
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPl 164 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPL 164 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcc
Confidence 446777888999999999999999999999999999999999999887764211 467899999999999999999
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc---------------cCcchHHHHhhHHHHHHHHHHHh
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK---------------FGWPSVFYSFGSLGSIWFALWLK 346 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~---------------~gwr~~f~i~~~~~li~~~l~~~ 346 (579)
..+..+|...+++||...+.+.+..++|.+.|.+++-.+..- .=||..|.+.++.+++++.. -.
T Consensus 165 SAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl 243 (538)
T KOG0252|consen 165 SATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RL 243 (538)
T ss_pred hHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hh
Confidence 999999999999999999998888888888877776655421 12998888776666554433 33
Q ss_pred hhcCCCCCChhh--cHH-HHhhhhcC----------Ccccccccc---hhHHHHhh-c--hHHHHHHHHHHHHHHHHHHH
Q 008070 347 KAYSSPKEDPEL--RAE-EKRHILGG----------SISKEAVSV---IPWKLILS-K--APVWALIISHFCHNWGTFIL 407 (579)
Q Consensus 347 ~~~~~~~~~~~~--~~~-~~~~~~~~----------~~~~~~~~~---~~~~~l~~-~--~~~~~~~l~~~~~~~~~~~~ 407 (579)
..||+++-.... +.+ ...+..+. .....+.+. ..+...+. . +.+...+...|+.-.++|..
T Consensus 244 ~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~ 323 (538)
T KOG0252|consen 244 KMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQ 323 (538)
T ss_pred cCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 344443322000 000 00000000 000000011 11222222 2 45666677788888888888
Q ss_pred HHHHHHHHHHhhCCChhhhhH--------HhHHHH-HHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHH
Q 008070 408 LTWMPTYYNQVLKFNLTESGL--------FCVLPW-LTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLT 478 (579)
Q Consensus 408 ~~~~p~~l~~~~g~s~~~~g~--------~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (579)
..+...++.. .|+.+..... ...+.. .+.+.|..+..+++|++||+.+...+ +++..++.+
T Consensus 324 nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G---------F~~~~i~~~ 393 (538)
T KOG0252|consen 324 NLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG---------FFIMTIFFF 393 (538)
T ss_pred ccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh---------HHHHHHHHH
Confidence 8888888876 5665544333 111112 22333555666789999999654433 222222222
Q ss_pred Hhhccc----hhHHHHHHHHHHhhhhhhhhhh-hhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh-----c
Q 008070 479 QLSHVR----TPAMAVLCMACSQGSDAFSQSG-LYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-----R 547 (579)
Q Consensus 479 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~-----~ 547 (579)
...... ......++..+..++..+.+.. ... ..+.+|.+.||+..|+..+.+.+|++++...++++.+ .
T Consensus 394 ~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 394 VIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred HHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcc
Confidence 221111 1122222333333333333322 222 3445666999999999999999999999999999999 7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 548 GSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 548 ~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
.|.+.++++.+++++++.++.+++.
T Consensus 474 ~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 474 IGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred ccchHHHHHHHHHHHHhHheeEEee
Confidence 8999999999999999998877765
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.83 E-value=2.4e-18 Score=181.59 Aligned_cols=325 Identities=18% Similarity=0.263 Sum_probs=232.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhh----hcCCcH-HHHHHHHHHHHHHHHHHhh-h-cc----CHHHHHHHHHHHHhh
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWAD----KFGGKP-VLGFGVIWWSVATVLTPVA-A-RI----GLPFLLIMRAFMGIG 274 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~D----r~Grr~-~l~~~~~~~~~~~ll~~~a-~-~~----~~~~ll~~r~l~Gig 274 (579)
..++++....-+...+..|+.|.++| |+|||+ .++++.+..+++.+++... + +. ...++++..++..++
T Consensus 37 ~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~ 116 (428)
T PF13347_consen 37 ALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIA 116 (428)
T ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 56677777778888888999999999 799765 4667888888888887766 3 11 123457777777999
Q ss_pred hhchhhHHHHHHhcccC-cCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-------CcchHHHHhhHHHHHHHHHHHh
Q 008070 275 EGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-------GWPSVFYSFGSLGSIWFALWLK 346 (579)
Q Consensus 275 ~g~~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-------gwr~~f~i~~~~~li~~~l~~~ 346 (579)
......+..++..|+.+ +++|.+..+....+..+|.++...+.+.+.+.+ +|++..++.+++.++..++..+
T Consensus 117 ~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~ 196 (428)
T PF13347_consen 117 YTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFF 196 (428)
T ss_pred hhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999997 578999999999999999977777666665422 5999999999888888888777
Q ss_pred hhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhh
Q 008070 347 KAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTES 426 (579)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 426 (579)
..+|++++.++.. ++......++.+++||.++.+.+..++...+........+.|.++..|.+ ...
T Consensus 197 ~~ke~~~~~~~~~-------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~ 262 (428)
T PF13347_consen 197 FVKERSVEVTEQE-------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLI 262 (428)
T ss_pred eeeeccccccccc-------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhh
Confidence 7776211111110 01111234777899999999999999998888888888999999988866 566
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhh
Q 008070 427 GLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSG 506 (579)
Q Consensus 427 g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (579)
+.+.....++.+++.++.++++||+|+|+....+. .+..++.+ .+......+.+...+.....+.+..... ..
T Consensus 263 ~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~i~~~l~gi~~~~~~-~~ 335 (428)
T PF13347_consen 263 SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGL--LLAALGFL----LLFFLGPGSPWLVLILFILAGIGYGAFF-VI 335 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhH--HHHHHHHH----HHHHHHhhhHHHHHHHHHHhHhhhcccc-cc
Confidence 77777888999999999999999999998765432 11111111 1111111233333333333333333333 33
Q ss_pred hhhhccc-c-------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 507 LYSNHQD-I-------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 507 ~~~~~~~-~-------~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
......+ + ..+..|..+|+.++...++..+++.+.|.+.+..||.
T Consensus 336 ~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 336 PWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred cccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 3332222 2 2356799999999999999999999999998876553
No 103
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=3.5e-18 Score=170.08 Aligned_cols=363 Identities=17% Similarity=0.147 Sum_probs=261.4
Q ss_pred cccccchhHHHHHHHHHHHHHH-----------------------------------hhhhhhhhhhhhhcCCcHHHHHH
Q 008070 198 WWEQFPKRWVVVLLCFSAFLLC-----------------------------------NMDRIVGGIWADKFGGKPVLGFG 242 (579)
Q Consensus 198 ~~~~~~~~~~v~~l~~~~~~~~-----------------------------------~l~~~~~G~l~Dr~Grr~~l~~~ 242 (579)
..+.+++||++++++++..+.. ....+++-|+.|++|-|..++++
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 4567889999988777644433 22226778899999999999999
Q ss_pred HHHHHHHHHHHHhhhcc----CHH--HHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHH
Q 008070 243 VIWWSVATVLTPVAARI----GLP--FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 316 (579)
Q Consensus 243 ~~~~~~~~ll~~~a~~~----~~~--~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i 316 (579)
..+.+++..+-..+... .++ ....+..+.+.+.-..+.....+..-||++++|..+..+-.++..+|..+|.++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999999986655321 234 667888899998888888878889999999999999999999999999999999
Q ss_pred HHHhhccc------Ccch--HHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhch
Q 008070 317 SPILIQKF------GWPS--VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKA 388 (579)
Q Consensus 317 ~~~l~~~~------gwr~--~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (579)
...+..+- .|.. .|+..++++.+.+++..+..+++|+.++........ +.......+..++++
T Consensus 196 ppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n~ 266 (480)
T KOG2563|consen 196 PPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKNR 266 (480)
T ss_pred cceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcCc
Confidence 88887643 3544 355455555555566666666655554443322221 111335678889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.+..+++.+.+....++...+.+-.-+.. -|++...+|+......+++++++++.|.+.||.+..+.... .....
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~----v~~~~ 341 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTL----VLYLF 341 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH----HHHHH
Confidence 99999888888877777777766655555 47777889999999999999999999999999977654322 11111
Q ss_pred HHHH-HHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 469 GFLG-PAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 469 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
.+.. +.+..........+++...+..++.+..+..+.......+...|..-++..|+.++.+++-+.+-..+.+...+.
T Consensus 342 ~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~ 421 (480)
T KOG2563|consen 342 ALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAED 421 (480)
T ss_pred HHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhc
Confidence 1111 111122222334455566666777777777776666778888998889999999999999999999999999888
Q ss_pred CC----hHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 548 GS----WDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 548 ~g----~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.+ +...-+.....+++++++..+++++
T Consensus 422 ~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 422 LGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred cCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 66 5555666666666666666665543
No 104
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.82 E-value=2.6e-24 Score=228.68 Aligned_cols=367 Identities=16% Similarity=0.147 Sum_probs=236.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhcc-CHHHHHHHHHHHHhhhhchhhHH
Q 008070 204 KRWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI-GLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 204 ~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~-~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
..+...++.+..+++..++.+++|.++||+|||+.++++.++..++.++.++++.. +++.++++|++.|++.|...+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45677888899999999999999999999999999999999999999999999743 57889999999999999999999
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc---CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhc
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF---GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR 359 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~---gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~ 359 (579)
..++.|..|+++|++..++.+.+..+|.+++..++..+.... +||+.+++.+++.++..+.. .+.||+|+--..+.
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~ 202 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKG 202 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceecccc
Confidence 999999999999999999999999999999988876654433 49999998888876655444 56677765211111
Q ss_pred HH-HHhhhh--------------cCCc--ccccccchhHHHHhhchH----HHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 008070 360 AE-EKRHIL--------------GGSI--SKEAVSVIPWKLILSKAP----VWALIISHFCH-NWGTFILLTWMPTYYNQ 417 (579)
Q Consensus 360 ~~-~~~~~~--------------~~~~--~~~~~~~~~~~~l~~~~~----~~~~~l~~~~~-~~~~~~~~~~~p~~l~~ 417 (579)
+. +.++.. +... ++.......++++++++. +...+....+. ..+.+....+.+.++.+
T Consensus 203 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~ 282 (451)
T PF00083_consen 203 RDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN 282 (451)
T ss_pred cccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 00 000000 0000 000001123555665533 22222222222 22333444555655555
Q ss_pred hhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc---hhHHHHHHHH
Q 008070 418 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR---TPAMAVLCMA 494 (579)
Q Consensus 418 ~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 494 (579)
.+.+.. -.......+...++.++..++.||+|||+....+. ...+++.+..+.......... ..........
T Consensus 283 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 283 -AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL--LLMAICSLILGIIFFLGVSSSSWWSILSIVFLAL 357 (451)
T ss_pred -cccccc--ccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccceeeee
Confidence 566665 22233444566667777789999999998766543 111111111110011111111 1112222221
Q ss_pred HHhhhh-hhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 495 CSQGSD-AFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 495 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
...+.. +..+.......|.+|.+.|+++.|+...++.+++++++.+...+.+..+....+.+.+++++++.++..++.+
T Consensus 358 ~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 358 FFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 212222 2222222334566777999999999999999999999999999888877555666666666666666656555
Q ss_pred Ccc
Q 008070 574 GER 576 (579)
Q Consensus 574 ~~~ 576 (579)
+.|
T Consensus 438 ET~ 440 (451)
T PF00083_consen 438 ETK 440 (451)
T ss_pred eCC
Confidence 444
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.82 E-value=7.4e-19 Score=163.28 Aligned_cols=329 Identities=16% Similarity=0.149 Sum_probs=212.5
Q ss_pred hhhhhhhhh-cCCcHHHHHHHHHHHHHHHHHH---hhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHH
Q 008070 224 IVGGIWADK-FGGKPVLGFGVIWWSVATVLTP---VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSL 299 (579)
Q Consensus 224 ~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ll~~---~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~ 299 (579)
.++|++.|| +|-|+.-++-+....++.++++ ..+ .+|.++.+|++.|+|.-....+-+.++.-||..||.+.++
T Consensus 97 ffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vf 174 (459)
T KOG4686|consen 97 FFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVF 174 (459)
T ss_pred eecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchh
Confidence 789999997 6888776666666777777655 445 6899999999999998888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCc------chHHHH---hhHHHHHHHH---HHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 300 AFVYSGMYLGSVTGLAVSPILIQKFGW------PSVFYS---FGSLGSIWFA---LWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 300 g~~~~~~~lG~~lgp~i~~~l~~~~gw------r~~f~i---~~~~~li~~~---l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
|+......+|..+--.+.+++.+..+- +....+ .+......-+ +..-...++. + +.-.++
T Consensus 175 GlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rA---e--rilh~e--- 246 (459)
T KOG4686|consen 175 GLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRA---E--RILHLE--- 246 (459)
T ss_pred hHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHH---H--HHHhhh---
Confidence 999999999998887777777764321 111111 1111111111 1111111000 0 000000
Q ss_pred cCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHH
Q 008070 368 GGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWI 447 (579)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l 447 (579)
++.. .+..+....+ -..|.+|.+.++.++++.+.+-+...-|.++++.+|+++..++.+.+.....+.+.+.+.|.+
T Consensus 247 ~g~~-Ge~pkLtdv~--~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i 323 (459)
T KOG4686|consen 247 EGFL-GEEPKLTDVN--TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAI 323 (459)
T ss_pred cCcc-cCCccccccc--ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHh
Confidence 0000 0000001111 126889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHH
Q 008070 448 ADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSN 527 (579)
Q Consensus 448 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 527 (579)
+||+|++-+.+.. +....+.+=..+.+.. .+++.....+.+....... ..+......+|.++.|+++|.++
T Consensus 324 ~Dk~G~n~~wv~~------a~~~tl~~H~~l~Ft~-lsPy~~m~~lGLsysllAc--slWP~va~~vpE~qLGTaygf~q 394 (459)
T KOG4686|consen 324 SDKYGFNLWWVAS------ACILTLLGHSGLFFTF-LSPYTSMTFLGLSYSLLAC--SLWPCVASLVPEEQLGTAYGFIQ 394 (459)
T ss_pred HhhhcceehhHHH------HHHHHHHHhhhHHhhh-ccHHHHHHHHhhhHHHHHH--HHhhhhhhhCCHHHhcchHHHHH
Confidence 9999998543321 1111111111122222 2333333333333222222 11222333357788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-hHH---HHHHHHHHHHHHHHHHHHhhcC
Q 008070 528 TAGVLAGVFGTAATGYILQRGS-WDD---VFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 528 ~~~~lg~~ig~~l~g~l~~~~g-~~~---~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.+.++|-++.|.++|.+.|.-| |.+ .|+..+.+.++...+++.+.++
T Consensus 395 sIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 395 SIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred HHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence 9999999999999999999843 543 3444555555555555555443
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.82 E-value=1.4e-17 Score=177.86 Aligned_cols=331 Identities=14% Similarity=0.098 Sum_probs=211.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhh----hcCC-cHHHHHHHHHHHHHHHHHHhhhcc--C--HHHHHHHHHHHHhhh
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWAD----KFGG-KPVLGFGVIWWSVATVLTPVAARI--G--LPFLLIMRAFMGIGE 275 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~D----r~Gr-r~~l~~~~~~~~~~~ll~~~a~~~--~--~~~ll~~r~l~Gig~ 275 (579)
...++.+..+.-+...+..|+.|.++| |+|| |+.++++.+..+++.+++...+.. + +..+++..++.+++.
T Consensus 41 ~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~ 120 (473)
T PRK10429 41 VGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTY 120 (473)
T ss_pred HHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHH
Confidence 456777788888888899999999999 5698 667778888888887666543311 1 334566677778888
Q ss_pred hchhhHHHHHHhccc-CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCcchHHHHhhHHHHHHHHHHHhh
Q 008070 276 GVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 276 g~~~~~~~~~i~~~~-~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-------~~gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
....++..+++.|+. +++||.+..++...+.++|.++.+.+...+.. ..+|++...+.+++.++..++.++.
T Consensus 121 t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 200 (473)
T PRK10429 121 TIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRN 200 (473)
T ss_pred HHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 888999999999998 58999999999788788876666655544322 1356777677776666655555554
Q ss_pred hcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhh
Q 008070 348 AYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESG 427 (579)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g 427 (579)
.+|++.+.....++ +++......++.+++|+.++.+++..++..........+.+.|.+...+ +....+
T Consensus 201 ~~e~~~~~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~ 269 (473)
T PRK10429 201 VHEVYSSDNQVSAE----------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFP 269 (473)
T ss_pred ceecCCcccccccc----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHH
Confidence 55543211100000 0001112345667789999988888888887777777777766665434 556667
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhh
Q 008070 428 LFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSG 506 (579)
Q Consensus 428 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 506 (579)
.+.....++.+++.++.+++.||+|+|+.+..+. .+..++.+. +...........+..++. .+.+.+........
T Consensus 270 ~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~ 345 (473)
T PRK10429 270 YYLSYAGAANLVTLILFPRLVKSLSRRILWAGAS--IFPVLSCGV--LLLMGLAAPHNALLIVIAGILLNIGTALFWVLQ 345 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH--HHHHHHHHH--HHHHhccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777888999999999999999997654332 111111111 111101112222222222 22222222222222
Q ss_pred hhhhccc-------cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 507 LYSNHQD-------IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 507 ~~~~~~~-------~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
.....+. ...+..|..+|+..++..++..+++.+.|++.+..||
T Consensus 346 ~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222222 2235568899999999999999999999999987666
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.81 E-value=1.8e-17 Score=168.15 Aligned_cols=353 Identities=12% Similarity=0.095 Sum_probs=227.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHH--HHH-HHHHhhh--ccCH-HHHHHHHHHHHhhhhch
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWS--VAT-VLTPVAA--RIGL-PFLLIMRAFMGIGEGVA 278 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~--~~~-ll~~~a~--~~~~-~~ll~~r~l~Gig~g~~ 278 (579)
.-.++.+.+...+...+.+|+.|.++||+|.||-++....+.. .+. ....+.+ ..|+ ...+++.+..|+.....
T Consensus 42 ~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~ 121 (412)
T PF01306_consen 42 GTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAG 121 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3456778888888888999999999999997765544333222 222 2212221 0132 23344445556666666
Q ss_pred hhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 279 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 279 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
.+...+++.++. ++.+.-.|-..+..++|.+++..++|.+.+ .+-...||+..+.+++..++.+...++.+++....
T Consensus 122 ~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~ 198 (412)
T PF01306_consen 122 VPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA 198 (412)
T ss_dssp HHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS
T ss_pred chHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh
Confidence 777777777665 455667888889999999999999999987 45677888776666665555555554433322111
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChhhhhHHhHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL---KFNLTESGLFCVLPWL 435 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~g~~~~~~~~ 435 (579)
+... .++++.......+++|+|++|.+.+........+..+....+.|....+ +.+....|++.+...+
T Consensus 199 ~~~~--------~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~ 270 (412)
T PF01306_consen 199 DALG--------AKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVF 270 (412)
T ss_dssp TTSS--------S------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred cccc--------cCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHH
Confidence 1000 0011112234567899999999998888877778888777888887633 2344567888888888
Q ss_pred HHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhh-hhhhhhhcccc
Q 008070 436 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFS-QSGLYSNHQDI 514 (579)
Q Consensus 436 ~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 514 (579)
..++...+.+++.+|+|.|+.++ ++.+++.+-+......+.++.+.+.=.+-+...... ....-...+..
T Consensus 271 ~E~~~m~~~p~li~rig~k~~Ll---------lag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~f 341 (412)
T PF01306_consen 271 LEALMMFFSPWLINRIGAKNLLL---------LAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHF 341 (412)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHH---------HHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcChHhHHH---------HHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999996433 222223333333344445555544444444443333 33344455567
Q ss_pred CCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 008070 515 GPRYAGVLLGLS-NTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERV 577 (579)
Q Consensus 515 ~~~~~g~~~g~~-~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 577 (579)
+++..++...+. +...+++.++.+.++|.++|+.|++..|++.+++.++..++..+..+++|+
T Consensus 342 d~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 342 DKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp -GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 778888988885 677899999999999999999999999999998888777777666655543
No 108
>PTZ00207 hypothetical protein; Provisional
Probab=99.80 E-value=7.3e-17 Score=172.21 Aligned_cols=339 Identities=15% Similarity=0.098 Sum_probs=225.7
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc----cCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSL 299 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~----~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~ 299 (579)
++.|++.||+|+|++++++.++++++.++++++.+ .+++.+++.|++.|+|.+...+.....+.+|+| ++||++.
T Consensus 79 lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~ 157 (591)
T PTZ00207 79 LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVV 157 (591)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHH
Confidence 68899999999999999999999999999999711 178999999999999999999999999999996 8899999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCCh---h--hcHHHHh--h------
Q 008070 300 AFVYSGMYLGSVT-GLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP---E--LRAEEKR--H------ 365 (579)
Q Consensus 300 g~~~~~~~lG~~l-gp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~---~--~~~~~~~--~------ 365 (579)
|+...+.++|.++ +++..+++. .+|++.|++.+++.++..++.+.+.+++|.... + .+++++. .
T Consensus 158 Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y 235 (591)
T PTZ00207 158 AIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVY 235 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhh
Confidence 9999999999976 555555544 468899999998888887777776665542211 0 0011110 0
Q ss_pred ---------h--------------------------------------h------c-----------C-Cc-c-------
Q 008070 366 ---------I--------------------------------------L------G-----------G-SI-S------- 372 (579)
Q Consensus 366 ---------~--------------------------------------~------~-----------~-~~-~------- 372 (579)
. . . . .. +
T Consensus 236 ~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~ 315 (591)
T PTZ00207 236 LKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKE 315 (591)
T ss_pred hhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccc
Confidence 0 0 0 0 00 0
Q ss_pred ----------------------cccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhh--hhH
Q 008070 373 ----------------------KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE--SGL 428 (579)
Q Consensus 373 ----------------------~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~--~g~ 428 (579)
..++...++.+.+++..+|++++..++.......+...+..+.+..-|.+... ...
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~ 395 (591)
T PTZ00207 316 HVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTL 395 (591)
T ss_pred cccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceee
Confidence 00111125677788899999999999988888877778887777732663322 233
Q ss_pred HhHHHHHHHHHHHHHHHHHhhhhhccC----cchHHHHHHHHHHHHH-HHHHHHHHhhccchhHHHHHHHHHHhhhhhhh
Q 008070 429 FCVLPWLTMAVFANMGGWIADTLVSKG----LSITAVRKIMQSIGFL-GPAFFLTQLSHVRTPAMAVLCMACSQGSDAFS 503 (579)
Q Consensus 429 ~~~~~~~~~~ig~~~~g~l~dr~g~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (579)
+.++.++++.+|++..|++.....+|+ +.+. +.+.+..+ ..+..++..... ...+.+..++.+.+. +..
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt----~~l~~~~~~~~~~lll~~~~p-~~~L~~~~~lvg~~~-G~~ 469 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPIT----IALFIPSVCIITMLTLFLTLP-KAALPLPYFIAAFAN-GFM 469 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchh----HHHHHHHHHHHHHHHHHHHCC-ccHhHHHHHHHHHHh-hHh
Confidence 678889999999999998873333332 3222 11122222 111222222222 112222222333333 333
Q ss_pred hhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHH-HHHHHHHHhcC----------C---hHHHHHHHHHHHHHHHHHH
Q 008070 504 QSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFG-TAATGYILQRG----------S---WDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 504 ~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig-~~l~g~l~~~~----------g---~~~~~~~~~~~~~l~~~~~ 568 (579)
.+.... ..+.+. ++.|+-+-+.....-+|..+- -.++|.++|+. | ++..|++.+++++++.++.
T Consensus 470 ~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s 548 (591)
T PTZ00207 470 AATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITS 548 (591)
T ss_pred HHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHH
Confidence 333333 344455 888888888888777877776 67889998751 1 6788999998888888876
Q ss_pred HHhh
Q 008070 569 NLFA 572 (579)
Q Consensus 569 ~~~~ 572 (579)
..+.
T Consensus 549 ~~l~ 552 (591)
T PTZ00207 549 TYVH 552 (591)
T ss_pred hhee
Confidence 6553
No 109
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=4.8e-17 Score=161.36 Aligned_cols=350 Identities=17% Similarity=0.067 Sum_probs=253.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCcHH-HHHHHHHHHHHHHHHHhhhc-cCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADKFGGKPV-LGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~-l~~~~~~~~~~~ll~~~a~~-~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.-..++..+...+-.|+.|.++|+.|+||. +-....+..++..++.+.++ ..++..++...+..++........++++
T Consensus 61 gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L 140 (438)
T COG2270 61 GYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSML 140 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHh
Confidence 444555566666777999999999997655 55556666667777777774 2356667788888999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh---h---------------cccCcchHHHHhhHHHHHHHHHHHhhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL---I---------------QKFGWPSVFYSFGSLGSIWFALWLKKA 348 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l---~---------------~~~gwr~~f~i~~~~~li~~~l~~~~~ 348 (579)
.+..++++-++..++-.....+|.++.-++.-.. . +...-|.++.+.++..++..+..+...
T Consensus 141 ~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v 220 (438)
T COG2270 141 PRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNV 220 (438)
T ss_pred hhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcc
Confidence 9999998888888887777777776655543211 1 122357788888888888877777777
Q ss_pred cCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhH
Q 008070 349 YSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL 428 (579)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~ 428 (579)
++.++........-... -++-..+++++.+++.+..++++.+++.-+..+...+...|....+|++..+..+
T Consensus 221 ~~~~~~~~~~~~~l~~g--------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll 292 (438)
T COG2270 221 HDAEKISSPPPTALRNG--------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLL 292 (438)
T ss_pred cccccccccchHHHHHH--------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHH
Confidence 76654321110000000 0001235778888899999999999999999999999999999889999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008070 429 FCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLY 508 (579)
Q Consensus 429 ~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (579)
+.....+.+++|.++.|++.+|+|.|+++..+. .+.......... ........+..+.++.+.+......-.
T Consensus 293 ~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l-------vi~~~~~~~~~~-~~~~~~f~i~gll~g~s~G~~qA~SRS 364 (438)
T COG2270 293 IGIALSVVAALGAIIAGFLDERFGSKPVLMIGL-------VILSIAALYLIF-LEGELDFWILGLLVGTSLGGAQASSRS 364 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH-------HHHHHHHHHHHH-ccccHHHHHHHHHHHHhcchHHHHHHH
Confidence 999999999999999999999999997765432 111111111111 122333334444555555555555666
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 509 SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 509 ~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
...+.+||++.++.+|+++..+..+..+||.+.+.+.+. .+.+..+....++.+++.++++..+.+
T Consensus 365 y~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 365 YLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 677778999999999999999999999999999999987 556777788888888887777666544
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.79 E-value=6.7e-17 Score=171.63 Aligned_cols=323 Identities=13% Similarity=0.087 Sum_probs=193.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhc----CCcHH-HHHHHHHHHHHHHHHHhhh-----ccCHHHHHHHHHHHHhh
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKF----GGKPV-LGFGVIWWSVATVLTPVAA-----RIGLPFLLIMRAFMGIG 274 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~----Grr~~-l~~~~~~~~~~~ll~~~a~-----~~~~~~ll~~r~l~Gig 274 (579)
...++.+.....+...+..++.|+++||. |||+. ++++.+...+..++....+ ......+++..++.+++
T Consensus 43 ~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (448)
T PRK09848 43 AAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLC 122 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHH
Confidence 44667778888888888999999999996 66664 4566555554444432111 11223345556777888
Q ss_pred hhchhhHHHHHHhcccC-cCchhHHHHHHHHHHH-----HHHHHHHHHHHHhhccc--CcchHHHHhhHHHHHHHHHHHh
Q 008070 275 EGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMY-----LGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFALWLK 346 (579)
Q Consensus 275 ~g~~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~-----lG~~lgp~i~~~l~~~~--gwr~~f~i~~~~~li~~~l~~~ 346 (579)
.+...++..++..+..+ +++|.+..++...+.+ ++..++|++++...... +|.....+.++++++..++...
T Consensus 123 ~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~ 202 (448)
T PRK09848 123 YSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFK 202 (448)
T ss_pred HHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888888777764 4678887776655433 45555666655432111 1211112223333333333333
Q ss_pred hhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhh
Q 008070 347 KAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTES 426 (579)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 426 (579)
..+|+++++.+. ......++.+++||.++...+..++...+......+.|.|+++.+|.++...
T Consensus 203 ~~~e~~~~~~~~----------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 266 (448)
T PRK09848 203 STRENVVRIVAQ----------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFT 266 (448)
T ss_pred CcEeccCCCccC----------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHH
Confidence 333332211100 0112346778999999999888888888888888888888888888777666
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHhhhhhhhhh
Q 008070 427 GLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVL-CMACSQGSDAFSQS 505 (579)
Q Consensus 427 g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 505 (579)
++......++.+++.++.+++.||+++|+.+..+. .+..++. ...........+...+ ..+.+.+.......
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~--~~~~i~~-----~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~ 339 (448)
T PRK09848 267 VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGA--LLGTCGY-----LLFFWVSVWSLPVALVALAIASIGQGVTMTV 339 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHHHH-----HHHHHcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 55555546677888999999999999987655432 1111111 1111111122222222 22233333222222
Q ss_pred hhhhhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 506 GLYSNHQDIG-------PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 506 ~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
......+..+ .+..|..+|+.++...+|..+++.+.|.+.+..||
T Consensus 340 ~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 340 MWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222222222 24569999999999999999999999999887665
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.78 E-value=2.2e-16 Score=161.82 Aligned_cols=326 Identities=15% Similarity=0.164 Sum_probs=236.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhh----cCC-cHHHHHHHHHHHHHHHHHHhhhc----cCHHHHHHHHHHHHhhhhc
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADK----FGG-KPVLGFGVIWWSVATVLTPVAAR----IGLPFLLIMRAFMGIGEGV 277 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr----~Gr-r~~l~~~~~~~~~~~ll~~~a~~----~~~~~ll~~r~l~Gig~g~ 277 (579)
.++.+..+.-+...+..|+.|.++|| +|| |+.++++.+..++...++..+++ .++...++..++.+++...
T Consensus 49 ~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~ 128 (467)
T COG2211 49 LAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTL 128 (467)
T ss_pred HHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHh
Confidence 34455555556667777999999996 676 56688888999999998888873 2456678888999999999
Q ss_pred hhhHHHHHHhcccC-cCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCcchHHHHhhHHHHHHHHHHHhhhc
Q 008070 278 AMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 278 ~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-------~~gwr~~f~i~~~~~li~~~l~~~~~~ 349 (579)
...+..++.+++.+ ++||.+..++...+..+|.++...+.+.+.. ..||+...++.++++.+..+.+++..+
T Consensus 129 vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ 208 (467)
T COG2211 129 VNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVK 208 (467)
T ss_pred eeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999985 7899999999999999998776666655543 347888889999998888888888887
Q ss_pred CCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHH
Q 008070 350 SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF 429 (579)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~ 429 (579)
|++.+....+...+ ......+..+++|+.+...++..++...+..........|.+..+|.+.....+.
T Consensus 209 ER~~~~~~~~~~~~-----------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~ 277 (467)
T COG2211 209 ERVVETQPTKTGVK-----------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLL 277 (467)
T ss_pred cccCccccCccccc-----------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHH
Confidence 77653332221011 0111235568899999999998888888888888888999998888888888888
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008070 430 CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS 509 (579)
Q Consensus 430 ~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (579)
......+.+++.++..++.+|+|+|+....+. .+...+.....+...+...+.++..++.........+...+
T Consensus 278 ~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~-------~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wa 350 (467)
T COG2211 278 LLASGAGLLIGLILWPRLVKKFGKKKLFLIGL-------LLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWA 350 (467)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH-------HHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHH
Confidence 88888888888999999999999998765432 11111111111222334444444434433333444444444
Q ss_pred hcccc--------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 510 NHQDI--------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 510 ~~~~~--------~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
...+. ..+..|..+|.+.++..+|.+++..+.|++.+..||
T Consensus 351 m~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 351 MVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33332 335679999999999999999999999999998665
No 112
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.78 E-value=1.5e-17 Score=176.69 Aligned_cols=328 Identities=10% Similarity=-0.044 Sum_probs=203.3
Q ss_pred hhhhhhhhhhcC-----CcHHHHHHHHHHH-HHHHHHHhhhccCH-HHHHHHHHHHHhhhhchhhHHHHHHhcccCcCch
Q 008070 223 RIVGGIWADKFG-----GKPVLGFGVIWWS-VATVLTPVAARIGL-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 295 (579)
Q Consensus 223 ~~~~G~l~Dr~G-----rr~~l~~~~~~~~-~~~ll~~~a~~~~~-~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r 295 (579)
.+++|+++||++ ||+.++++.++.. +.....+..+ +. ....+..++.+++.+...++..+++.|..+ +++
T Consensus 77 K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~--~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~ 153 (468)
T TIGR00788 77 KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKV--SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP 153 (468)
T ss_pred HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccccc--chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC
Confidence 367999999997 7777888877763 4434444434 43 344458899999999999999999999998 555
Q ss_pred hHHH---HHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCC-CChhhcHHHH---hhhhc
Q 008070 296 SRSL---AFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK-EDPELRAEEK---RHILG 368 (579)
Q Consensus 296 ~~~~---g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~-~~~~~~~~~~---~~~~~ 368 (579)
.... ++.....++|.++|+.++|.+.+.++|+..|++.+++.++..+.. .+.+|++. ..++..+.+. .....
T Consensus 154 ~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~ 232 (468)
T TIGR00788 154 SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTL 232 (468)
T ss_pred CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-Hhcccccccccccccccchhhhhhhhh
Confidence 4433 333344558999999999999999999999999888877764433 34444321 1111000000 00000
Q ss_pred CCcccccccchhHHHHhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHH
Q 008070 369 GSISKEAVSVIPWKLILSKAPVWALIISHFC-HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWI 447 (579)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l 447 (579)
.............+..+++|.++...+..++ +.........+. .+..+.+|+++.+.|++....+++.+++..+.+++
T Consensus 233 ~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~ 311 (468)
T TIGR00788 233 GVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRF 311 (468)
T ss_pred hHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 0000000111234456778888776665555 222211111110 12234589999999999999999999999999999
Q ss_pred hhhhhccCcchHHHHHHHHHHHHHHHHHHHHH----h-------hccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCC
Q 008070 448 ADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ----L-------SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP 516 (579)
Q Consensus 448 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (579)
.+|++.|+.+..+ .++.++.... . .............+...+......+......+..|+
T Consensus 312 ~~~~~~r~~l~~~---------~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~ 382 (468)
T TIGR00788 312 LKTFPYRLLFGVT---------TLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPS 382 (468)
T ss_pred HhhCCHHHHHHHH---------HHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCC
Confidence 8888877543322 1111111100 0 001111122222223333333344445556667888
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----hHHHHHHHHHHHHHH
Q 008070 517 RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS-----WDDVFKVAVVLYIIG 564 (579)
Q Consensus 517 ~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g-----~~~~~~~~~~~~~l~ 564 (579)
+.+|+.+|+.+.+.++|..+++.++|.+.+..| |+..+.+..+..+..
T Consensus 383 ~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~ 435 (468)
T TIGR00788 383 GCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAP 435 (468)
T ss_pred CceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999887 666665554444433
No 113
>PRK11462 putative transporter; Provisional
Probab=99.78 E-value=9.1e-16 Score=162.88 Aligned_cols=320 Identities=12% Similarity=0.063 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhh----cCCc-HHHHHHHHHHHHHHHHHHhhhccC----HHHHHHHHHHHHhhhhc
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADK----FGGK-PVLGFGVIWWSVATVLTPVAARIG----LPFLLIMRAFMGIGEGV 277 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr----~Grr-~~l~~~~~~~~~~~ll~~~a~~~~----~~~ll~~r~l~Gig~g~ 277 (579)
.++.+..+.-+...+..|+.|.++|| +||| +.++++.+.++++.+++...+..+ +..+++..++..++..+
T Consensus 46 ~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~ 125 (460)
T PRK11462 46 FVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTV 125 (460)
T ss_pred HHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 44566666667777778999999996 6875 556678788888877766555222 34566777778889998
Q ss_pred hhhHHHHHHhcccC-cCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-------CcchHHHHhhHHHHHHHHHHHhhhc
Q 008070 278 AMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-------GWPSVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 278 ~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-------gwr~~f~i~~~~~li~~~l~~~~~~ 349 (579)
...+..++.+++.+ ++||++..++...+..+|..+++.+...+.... +|+....+.+++.+++.++.+...+
T Consensus 126 ~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~k 205 (460)
T PRK11462 126 VNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTK 205 (460)
T ss_pred HhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcce
Confidence 99999999999986 789999999999999999888887766555433 5777777777776666655555444
Q ss_pred CCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHH
Q 008070 350 SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF 429 (579)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~ 429 (579)
|+++++.++. .....++.+++|+.++.++...++..............|.+..+|. +...+.+
T Consensus 206 E~~~~~~~~~----------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~ 268 (460)
T PRK11462 206 ERVEAPPTTT----------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAF 268 (460)
T ss_pred eccCCCccCC----------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHH
Confidence 4432211100 0112456678899888777776666666665555556666655553 3444566
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008070 430 CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS 509 (579)
Q Consensus 430 ~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (579)
.....++.+++.+++++++||+++|+...... .......+.+............+..++.+.+. .........
T Consensus 269 l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~l~~~ 341 (460)
T PRK11462 269 LTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN------ALLAVISLAMFFVPMQASITMFVFIFVIGVLH-QLVTPIQWV 341 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH------HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 66777888899999999999999886533211 11111111111111111112222222222222 222222222
Q ss_pred hcccc--------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 510 NHQDI--------GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 510 ~~~~~--------~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
...+. ..+..|..++...+...+|.++++.+.|.+.+..||
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 134457777888899999999999999999987665
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.78 E-value=1.8e-15 Score=150.76 Aligned_cols=352 Identities=15% Similarity=0.154 Sum_probs=240.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcC-----CcHH-HHHHHHHHHHHHHHHHhhh----c-------cCH-H--HH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFG-----GKPV-LGFGVIWWSVATVLTPVAA----R-------IGL-P--FL 264 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~-l~~~~~~~~~~~ll~~~a~----~-------~~~-~--~l 264 (579)
.|++..+..+-++... .++.+|..+|+.+ ||.. +..|.+++..+..+.+++. . ..+ + ..
T Consensus 14 A~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a 92 (403)
T PF03209_consen 14 AWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALA 92 (403)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHH
Confidence 5677777777777765 5799999999998 7755 5566666666555544331 1 112 2 23
Q ss_pred HHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHH---H
Q 008070 265 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW---F 341 (579)
Q Consensus 265 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~---~ 341 (579)
.+.-.+.|+|.+...++..++++|..|+|+|+++.++...+.-+|.+++.++.+.+.+.++-.-..-+.....++. .
T Consensus 93 ~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~ 172 (403)
T PF03209_consen 93 ALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLN 172 (403)
T ss_pred HHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999999999999999999999999999988776433333322222222 2
Q ss_pred HHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 008070 342 ALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKF 421 (579)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~ 421 (579)
++..+-. |++..... ....+++......++++..+|....+.+..++...+++.=...+-+|-.+++|+
T Consensus 173 ~ia~wg~-E~r~~~~~----------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgm 241 (403)
T PF03209_consen 173 LIALWGQ-EPRRSRRA----------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGM 241 (403)
T ss_pred HHHHHhc-ccCCcccc----------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCC
Confidence 2222222 11111111 001111222234577788899999888888888888888888899999999999
Q ss_pred ChhhhhHHhHHHHHHHHHHHHHHHHHhh-hhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhh
Q 008070 422 NLTESGLFCVLPWLTMAVFANMGGWIAD-TLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSD 500 (579)
Q Consensus 422 s~~~~g~~~~~~~~~~~ig~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (579)
+..+...+......+..+|..+.|++.. |.++++....+. ..+..............+.+.+....+.++.+.+
T Consensus 242 sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~-----~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 242 SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGC-----LLGALAFALIILAGPLGSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH-----HHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhh
Confidence 9999999999999999999999998776 455554333221 1111111111111222233344444455555555
Q ss_pred hhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CChHHHHHHHHHHHHHHHHHHHH
Q 008070 501 AFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR----------GSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~----------~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
.+........+....++..|..+|.....+.++..++..++|.+.|. .+|..+|.+-+++.++++++...
T Consensus 317 ~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~ 396 (403)
T PF03209_consen 317 LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGR 396 (403)
T ss_pred HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666667788999999999999999999999999999884 24777777777777777666655
Q ss_pred hhc
Q 008070 571 FAT 573 (579)
Q Consensus 571 ~~~ 573 (579)
+.+
T Consensus 397 l~~ 399 (403)
T PF03209_consen 397 LDR 399 (403)
T ss_pred hhh
Confidence 543
No 115
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.78 E-value=1.4e-15 Score=159.80 Aligned_cols=352 Identities=14% Similarity=0.127 Sum_probs=198.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhc-CCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhc
Q 008070 210 LLCFSAFLLCNMDRIVGGIWADKF-GGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 288 (579)
Q Consensus 210 ~l~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 288 (579)
.+........++..+++|+++||+ |||++++++.++..++.+++++... +...+++...+.++|.|...+...++++|
T Consensus 49 ~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~-~~~~~~l~l~li~iG~G~~~~~~~alv~e 127 (493)
T PRK15462 49 ELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGE 127 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHhcccccccHHHHHHH
Confidence 334444456667779999999999 9999999999999999887765431 22334444455556777777878899999
Q ss_pred ccCcC--chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhh---cCCCC-CChhhcHHH
Q 008070 289 WIPVS--ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA---YSSPK-EDPELRAEE 362 (579)
Q Consensus 289 ~~~~~--~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~---~~~~~-~~~~~~~~~ 362 (579)
++|++ +|..++++...+.++|..++|.+.+++.+.+||++.|.+.++..++..+..+... ++... +++..++++
T Consensus 128 lfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~ 207 (493)
T PRK15462 128 LYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATN 207 (493)
T ss_pred HCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhh
Confidence 99875 6999999999999999999999999999999999999986654433333332221 11100 000000000
Q ss_pred Hhh---------------hhcCCccccccc------------------chhHHHHhhchHH---HHHHHHHHHHHHHHHH
Q 008070 363 KRH---------------ILGGSISKEAVS------------------VIPWKLILSKAPV---WALIISHFCHNWGTFI 406 (579)
Q Consensus 363 ~~~---------------~~~~~~~~~~~~------------------~~~~~~l~~~~~~---~~~~l~~~~~~~~~~~ 406 (579)
... ........+... ..+.... .++++ ..+.+...+++..+.-
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-er~r~~~~~~l~~~~~~Fw~~~~Q 286 (493)
T PRK15462 208 FLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQK-QRKELGLIVTLTFFSMLFWAFAQQ 286 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH-HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 000 000000000000 0000000 11122 2223333333333333
Q ss_pred HHHHHHHHHHHhh-----CCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhc--cCc---chHHHHHHHHHHHHHHHHHH
Q 008070 407 LLTWMPTYYNQVL-----KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS--KGL---SITAVRKIMQSIGFLGPAFF 476 (579)
Q Consensus 407 ~~~~~p~~l~~~~-----g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~--~~~---~~~~~~~~~~~~~~~~~~~~ 476 (579)
..+-+..|..+.. |++ ....++.++..+..++..++.+++-.|..+ |.. ...+....+.+++++.+.+.
T Consensus 287 ~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~ 365 (493)
T PRK15462 287 GGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLS 365 (493)
T ss_pred hhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555665532 222 235566777777777777777776566532 221 11222223333333333222
Q ss_pred HHHhh---ccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHhc-----
Q 008070 477 LTQLS---HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAG-VLAGVFGTAATGYILQR----- 547 (579)
Q Consensus 477 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~lg~~ig~~l~g~l~~~----- 547 (579)
..... ..+.+|++...++...+-....+.......+..|++.+|..+|+..... .+|..++..+.+.....
T Consensus 366 ~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~ 445 (493)
T PRK15462 366 ARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDAS 445 (493)
T ss_pred HhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcc
Confidence 21111 1233455555555555665666666666667677799999999986533 56666666665554311
Q ss_pred -------CChHHHHHHHHHHHHHH
Q 008070 548 -------GSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 548 -------~g~~~~~~~~~~~~~l~ 564 (579)
..|...|...+...+++
T Consensus 446 ~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 446 GAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred ccccchhhhHHHHHHHHHHHHHHH
Confidence 13566777777666555
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.66 E-value=2.4e-14 Score=145.53 Aligned_cols=359 Identities=16% Similarity=0.165 Sum_probs=220.3
Q ss_pred HHHHHhhhhhhhhhhhhhc-CCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcC
Q 008070 215 AFLLCNMDRIVGGIWADKF-GGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS 293 (579)
Q Consensus 215 ~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 293 (579)
.....++..+++|+++||+ |+|+.+++|.+++.+|.++.+.....+...++++-++.++|.|..-+...++++|.+|++
T Consensus 70 y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~ 149 (498)
T COG3104 70 YGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKD 149 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCC
Confidence 3344556669999999996 999999999999999999998883115778999999999999999999999999999854
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCC---C--CCChhhcHHHHhhh
Q 008070 294 --ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSS---P--KEDPELRAEEKRHI 366 (579)
Q Consensus 294 --~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~---~--~~~~~~~~~~~~~~ 366 (579)
+|-..++++.++.++|.+++|++.+++.+++||...|.+.++-..+.++..+...+.. + ++............
T Consensus 150 DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~ 229 (498)
T COG3104 150 DPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPV 229 (498)
T ss_pred CcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhh
Confidence 4778899999999999999999999999999999999987766666555544433211 1 00000000000000
Q ss_pred h--------cCC----cccccc-----------cchhHHHHh------h-chHHH---HHHHHHHHHHHHHHHHHHHHHH
Q 008070 367 L--------GGS----ISKEAV-----------SVIPWKLIL------S-KAPVW---ALIISHFCHNWGTFILLTWMPT 413 (579)
Q Consensus 367 ~--------~~~----~~~~~~-----------~~~~~~~l~------~-~~~~~---~~~l~~~~~~~~~~~~~~~~p~ 413 (579)
. ... ...+.. ...-+.+.+ . +++++ .+.+...+++..+.-..+.+..
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~ 309 (498)
T COG3104 230 LGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNL 309 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 0 000 000000 000000000 1 11222 2222222223222222333444
Q ss_pred HHHHhhCCC----hhhhhHHhHHHHHHHHHHHHHHHHHhhhhhcc--C---cchHHHHHHHHHHHHHHHHHHHHHhh---
Q 008070 414 YYNQVLKFN----LTESGLFCVLPWLTMAVFANMGGWIADTLVSK--G---LSITAVRKIMQSIGFLGPAFFLTQLS--- 481 (579)
Q Consensus 414 ~l~~~~g~s----~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~--- 481 (579)
|..+..+.+ ....++..+...+.-++..++..++..+.+++ . ....++...+...++++.........
T Consensus 310 ~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~ 389 (498)
T COG3104 310 YADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPS 389 (498)
T ss_pred HHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 443321111 13345667777777777887777777775443 2 22223333333333333333311222
Q ss_pred -ccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH------HHhcCChHHHH
Q 008070 482 -HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY------ILQRGSWDDVF 554 (579)
Q Consensus 482 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~------l~~~~g~~~~~ 554 (579)
..+.++.+...++...+-....+..+....+..|+...+.++|+.......+..++..+.+. ..+.......|
T Consensus 390 ~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F 469 (498)
T COG3104 390 GLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVF 469 (498)
T ss_pred CCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhH
Confidence 23445556666666677767777777777777888888999998888777777777777663 33445677778
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 008070 555 KVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 555 ~~~~~~~~l~~~~~~~~~~ 573 (579)
..++...++..++.+...+
T Consensus 470 ~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 470 GTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHHHHHHHHHHHHHHHhhH
Confidence 8888777766665555443
No 117
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=3.2e-14 Score=148.25 Aligned_cols=317 Identities=17% Similarity=0.132 Sum_probs=216.8
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhh--hchhhHHHHHHhcccC
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE--GVAMPAMNNMLSKWIP 291 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~--g~~~~~~~~~i~~~~~ 291 (579)
...+..++..+..|.++||+|||..+.+..+...+..+...+.. +|.++ +.|+.. +.......++++|...
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~ 142 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISS 142 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccc
Confidence 44556667779999999999999999999999999888887775 44444 444332 3456778899999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCc
Q 008070 292 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSI 371 (579)
Q Consensus 292 ~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (579)
.++|...+|+.......+..++|.+++.+....|.-.+|.+..+..++..+..++..||+..++.... ........+..
T Consensus 143 ~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~~~~~~~ 221 (463)
T KOG2816|consen 143 EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRELTPGSL 221 (463)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccccCCCcc
Confidence 99999999999999999999999999999999999999999999999888888888888765544331 00000000000
Q ss_pred --ccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH-HH
Q 008070 372 --SKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT-WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG-WI 447 (579)
Q Consensus 372 --~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g-~l 447 (579)
.............-.+|..+.+++..++.......-.. .++.|+...+++++.+.+.+.+.......++.++.. .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l 301 (463)
T KOG2816|consen 222 DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLL 301 (463)
T ss_pred cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111222345555555555544444432222 446778888999999999999999988888887766 77
Q ss_pred hhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHH
Q 008070 448 ADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSN 527 (579)
Q Consensus 448 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 527 (579)
...++.++... +++..-.+...........|..........+.....+.........+.++++|+++++..
T Consensus 302 ~~~l~~~~~i~---------lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is 372 (463)
T KOG2816|consen 302 SSILGEKRLIS---------LGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIIS 372 (463)
T ss_pred HHHHhhhhHhh---------HHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHH
Confidence 77788775322 233322222222333333344333333333333344444444555578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 008070 528 TAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 528 ~~~~lg~~ig~~l~g~l~~~ 547 (579)
.+..+...++|.+.+.++..
T Consensus 373 ~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 373 GIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHHHhhhhhHHHHHHHHHH
Confidence 99999999999999988754
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.58 E-value=1.8e-13 Score=140.66 Aligned_cols=355 Identities=16% Similarity=0.188 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCC-cHHHHHHHHHHHHHHHHH-Hhh--hccCHHHHHHHHHHHHhhhhchhhHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGG-KPVLGFGVIWWSVATVLT-PVA--ARIGLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~ll~-~~a--~~~~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
..+++.+...++..+..+..|++..|.+. |+.++.+.++..++.++. ++. ++..-+.++++|++.|+|.+ .....
T Consensus 72 ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~l 150 (488)
T KOG2325|consen 72 FFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVL 150 (488)
T ss_pred hhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHH
Confidence 44666677888888899999999999997 888999999999999987 333 32235789999999999987 45677
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cC-----------cchHHHHhhHHHHHHHHHHHhhhc
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--FG-----------WPSVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~--~g-----------wr~~f~i~~~~~li~~~l~~~~~~ 349 (579)
-+++++-...++|.++++....+..+|.++||.++..+..- -| +-.+-|+.+++.++.+++..+..+
T Consensus 151 R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 151 RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 88999988889999999999999999999999888776531 12 234557777777777777777777
Q ss_pred CCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHH
Q 008070 350 SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF 429 (579)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~ 429 (579)
|...+..+.+.+..++ .....++.+.++ +.....+.+.+..+...+......+..+.+....++++..++-..
T Consensus 231 E~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~ 303 (488)
T KOG2325|consen 231 EVYRGIIDKKKRSVEE-EKSDIEKVKKPK------LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLY 303 (488)
T ss_pred ecccCccccccccchh-hccchhhhccCC------hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHh
Confidence 6655433221111100 000000001111 111223344444555555555556666666666678776665443
Q ss_pred hH----HHHHHHHHHHHHHHHHh-hhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc--------------------
Q 008070 430 CV----LPWLTMAVFANMGGWIA-DTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR-------------------- 484 (579)
Q Consensus 430 ~~----~~~~~~~ig~~~~g~l~-dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 484 (579)
.. +.++..++-.+...+.. .++.+|+.+..+. ...+....+.+.......
T Consensus 304 ~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~-----l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~w 378 (488)
T KOG2325|consen 304 NGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGF-----LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSW 378 (488)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehH-----HHHHHhhheeeeeccccccccccccccccCcCcccchh
Confidence 33 33332222222222222 2223343332211 111111111111110000
Q ss_pred -------hhHHHHHHHH--HHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Q 008070 485 -------TPAMAVLCMA--CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFK 555 (579)
Q Consensus 485 -------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~ 555 (579)
..+....... ++...-.........+.+.+.|++++++.|++.....++..++|.+...++...|+++.+.
T Consensus 379 c~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~ 458 (488)
T KOG2325|consen 379 CDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWI 458 (488)
T ss_pred hccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHH
Confidence 0111111111 1111111122234446677899999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 008070 556 VAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 556 ~~~~~~~l~~~~~~~~~~~ 574 (579)
+.++..++...++.+..++
T Consensus 459 ~~~~~~l~~~~l~~~~~~r 477 (488)
T KOG2325|consen 459 ILLCLLLVVAALWIVFLKR 477 (488)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8888777777666655443
No 119
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.54 E-value=6.5e-12 Score=134.46 Aligned_cols=231 Identities=14% Similarity=0.178 Sum_probs=178.4
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhh----------------------------------------------
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA---------------------------------------------- 257 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~---------------------------------------------- 257 (579)
.+..+..-|..|-+++-+|.++++++.+++++-+
T Consensus 150 ~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 229 (735)
T KOG3626|consen 150 IFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKRE 229 (735)
T ss_pred HhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCccccc
Confidence 6777888888888999999999999999876521
Q ss_pred -ccC--H-HHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc---------
Q 008070 258 -RIG--L-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--------- 324 (579)
Q Consensus 258 -~~~--~-~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~--------- 324 (579)
..+ + ..++++.++.|+|....++...+++-|...+++-+..+|++.....+|.++|-++++++...+
T Consensus 230 ~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~ 309 (735)
T KOG3626|consen 230 KESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIG 309 (735)
T ss_pred ccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCC
Confidence 001 2 256788999999999999999999999999999999999999999999999999999986522
Q ss_pred ----------CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCc--ccc-------cccchhHHHHh
Q 008070 325 ----------GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSI--SKE-------AVSVIPWKLIL 385 (579)
Q Consensus 325 ----------gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~l~ 385 (579)
-|..-|++.+.+.++..+..++++++.|+..++....+.+....+.. ... +......+.++
T Consensus 310 it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll 389 (735)
T KOG3626|consen 310 ITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLL 389 (735)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHh
Confidence 16667888888888888888877766665433211111111111100 000 11234567788
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH-HHHHHHHHHHHHhhhhhcc
Q 008070 386 SKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSK 454 (579)
Q Consensus 386 ~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~g~l~dr~g~~ 454 (579)
+||.+...++...+....+.++.+|+|-|+++++|.++..+..+.....+ +..+|.+++|++.+|+.-+
T Consensus 390 ~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 390 SNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred cCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 99999999999999999999999999999999999999999998876665 5667888999999988544
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.50 E-value=5.1e-13 Score=116.95 Aligned_cols=132 Identities=26% Similarity=0.420 Sum_probs=118.7
Q ss_pred HHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCch
Q 008070 216 FLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 295 (579)
Q Consensus 216 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r 295 (579)
.++..+..++.|++.||+|||+.+..+..+..++.++..+.+ +++.+++.+++.|++.+...+...+++.|.+|+++|
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 455667779999999999999999999999999998888887 888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhc
Q 008070 296 SRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 296 ~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~ 349 (579)
++.+++......+|..+++.+++.+.+..+|++.|++.+++.++..+..++..|
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999899999999988887777666665544
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.48 E-value=2.9e-12 Score=134.51 Aligned_cols=346 Identities=12% Similarity=0.056 Sum_probs=207.0
Q ss_pred hhhhhhhhhhhc-----CCcHHHHHHHHHHHHHHHHHHhhhc--cCHHHHHHHHHHHHhhhhchhhHHHHHHhcccC--c
Q 008070 222 DRIVGGIWADKF-----GGKPVLGFGVIWWSVATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP--V 292 (579)
Q Consensus 222 ~~~~~G~l~Dr~-----Grr~~l~~~~~~~~~~~ll~~~a~~--~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~--~ 292 (579)
..++.|.++|-+ .||+.++++.++..++.+.++..+. .+.....++-++..+|.+....++.+++.|... +
T Consensus 40 ~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p 119 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREP 119 (433)
T ss_pred HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC
Confidence 348999999986 3566677788777666666665542 135566677788899999999999999999984 3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcCCcc
Q 008070 293 SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSIS 372 (579)
Q Consensus 293 ~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (579)
++++...+.......+|.+++..++|.+.+..++++.|.+.+++.++..+..++..+|+++..........++.......
T Consensus 120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 199 (433)
T PF03092_consen 120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFG 199 (433)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhH
Confidence 44788888889999999999999999999999999999999888887777667766652221111000000000000000
Q ss_pred cccccchhHHHHhhchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhC---CChhhhhHHhHHHHHHHHHHHHHHHHHh
Q 008070 373 KEAVSVIPWKLILSKAPVWALII-SHFCHNWGTFILLTWMPTYYNQVLK---FNLTESGLFCVLPWLTMAVFANMGGWIA 448 (579)
Q Consensus 373 ~~~~~~~~~~~l~~~~~~~~~~l-~~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~~g~~~~~~~~~~~ig~~~~g~l~ 448 (579)
..++.....+..++.+.+|...+ ..++............-.+..+..+ +++...+.+..+..++.++|..+..+..
T Consensus 200 ~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~ 279 (433)
T PF03092_consen 200 SFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYF 279 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01112234555677777776666 2222221111110100112233355 8888888887777777777777666655
Q ss_pred hhhhccCcchHHHHHHHHHHHHHHHHHHHH---Hhhc-------cchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCc
Q 008070 449 DTLVSKGLSITAVRKIMQSIGFLGPAFFLT---QLSH-------VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRY 518 (579)
Q Consensus 449 dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (579)
.+..-|+++. ...++.....+. .... .+.+....-..+..........+......+..|+..
T Consensus 280 ~~~~~R~~~~--------~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~ 351 (433)
T PF03092_consen 280 SNWSWRRIFV--------VTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGS 351 (433)
T ss_pred hCCCHHHHHH--------HHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 5544443221 111111111111 0000 111111111122222222333445555667789999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------hHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQRGS--------WDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g--------~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
.|+.+|+...+.++|..++..++..+.+..+ .....++..++.++.+.+..++.+++
T Consensus 352 Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 352 EGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQK 416 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999988754 33445555555555555554555433
No 122
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.44 E-value=1.2e-14 Score=155.26 Aligned_cols=340 Identities=12% Similarity=0.117 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhh----------------------------
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA---------------------------- 257 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~---------------------------- 257 (579)
...+++.+..-+...+..++..++.+|..|-+++-+|.++++++.+++++-+
T Consensus 38 ~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~ 117 (539)
T PF03137_consen 38 SQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSS 117 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccccccc
Confidence 3446666666677777778888888888887888888888888888765311
Q ss_pred --------------------ccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHH
Q 008070 258 --------------------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS 317 (579)
Q Consensus 258 --------------------~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~ 317 (579)
..-+..++++.++.|+|.+..++...+++-|.+++++-+..+|++.....+|.++|-+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg 197 (539)
T PF03137_consen 118 SSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLG 197 (539)
T ss_dssp ----------------------------------SSS-------------------------------------------
T ss_pred ccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHH
Confidence 001356788999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccc---------------------C-cchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcH---HHHh---hhhcC
Q 008070 318 PILIQKF---------------------G-WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA---EEKR---HILGG 369 (579)
Q Consensus 318 ~~l~~~~---------------------g-wr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~---~~~~---~~~~~ 369 (579)
+.+...+ | |..-|++.+++.++..+..+.++++-|...+.... ++.+ ...+.
T Consensus 198 ~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~ 277 (539)
T PF03137_consen 198 SFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDS 277 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhc
Confidence 8876421 2 66677777877777777777776655554111000 0000 00000
Q ss_pred Ccc---------cccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH-HHHH
Q 008070 370 SIS---------KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAV 439 (579)
Q Consensus 370 ~~~---------~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~i 439 (579)
..+ ..+......+.+++||.+....+...+......++.+++|-|++.+++.++.++.++.....+ ++++
T Consensus 278 ~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~ 357 (539)
T PF03137_consen 278 FKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAAL 357 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhhe
Confidence 000 112223456778999999999999999999999999999999999999999999988766665 6778
Q ss_pred HHHHHHHHhhhhhcc--CcchHHHHHHHHHHHHHH-HHHHHHH----------hhc------------------------
Q 008070 440 FANMGGWIADTLVSK--GLSITAVRKIMQSIGFLG-PAFFLTQ----------LSH------------------------ 482 (579)
Q Consensus 440 g~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~------------------------ 482 (579)
|.+++|++.+|++-+ +...... +...+.++. ...+++. ...
T Consensus 358 G~llGG~ivkk~kl~~~~~~~~~~--v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~ 435 (539)
T PF03137_consen 358 GILLGGYIVKKFKLSARGAAKFCI--VVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGN 435 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ehheEEEEEEEecCcHHHHHHHHH--HHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCc
Confidence 889999999998543 2222111 111111111 0000000 000
Q ss_pred ------------cchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Q 008070 483 ------------VRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGV-LAGVFGTAATGYILQR 547 (579)
Q Consensus 483 ------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-lg~~ig~~l~g~l~~~ 547 (579)
.......++. ++..+.......+........+++++|+.+.|+..++.. +|.+-||.++|++.|.
T Consensus 436 ~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 436 GSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred ccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 0001111111 222223333344555556677899999999999887755 5778899999999996
No 123
>PRK10054 putative transporter; Provisional
Probab=99.38 E-value=3e-11 Score=126.07 Aligned_cols=174 Identities=16% Similarity=0.149 Sum_probs=123.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
++.++.+.+..++...+.+....++|.|+++++|++..+.|++.+...++.+++.++.|+++||+|+|+.+..+. ..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~--~~- 82 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI--TA- 82 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH--HH-
Confidence 345677778888888888999999999999889999999999999999999999999999999999997654322 11
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
......+.. ..++.+..+++..+.+.......+.... ..+..++++|++++|+.+...++|.+++|.+.+.+.
T Consensus 83 ----~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 83 ----FASGFIAIP--LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred ----HHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1222333332222222222222232333 345567888999999999999999999999999988
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHH
Q 008070 546 QRGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 546 ~~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
+ .+|+..|.+.+++.+++.++..+
T Consensus 157 ~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 157 M-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred H-hccCcHHHHHHHHHHHHHHHHHH
Confidence 6 68999999888877776554433
No 124
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.37 E-value=1.8e-10 Score=113.55 Aligned_cols=227 Identities=17% Similarity=0.185 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
.+..+...++....+..++.|.++||+|||+..++..++.+++++..- .+ +++.++++|++.|++.+....+..+++
T Consensus 70 qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~--~~~~L~~GRvlgGiaTSLLfS~FEsW~ 146 (354)
T PF05631_consen 70 QIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SS--NYPVLLLGRVLGGIATSLLFSAFESWM 146 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-cc--ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677777888888889999999999999999999999999887544 45 799999999999999999999888876
Q ss_pred hccc-----CcCchhHHHHHHH-HHHHHHHHHHHHHHHHhhcccCc--chHHHHhhHHHHHHHHHHHhhhcCCCCCChhh
Q 008070 287 SKWI-----PVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 358 (579)
Q Consensus 287 ~~~~-----~~~~r~~~~g~~~-~~~~lG~~lgp~i~~~l~~~~gw--r~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~ 358 (579)
..-. |++..+..++... ...++-.++..+++-++.+..+. ..+|....++.++..++.....+|...+..+.
T Consensus 147 V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~ 226 (354)
T PF05631_consen 147 VHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS 226 (354)
T ss_pred HHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc
Confidence 5433 2233344444444 33445556666677777766554 78888877777776666665555544332211
Q ss_pred cHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCChhhhhHHhHHHHHHH
Q 008070 359 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT-WMPTYYNQVLKFNLTESGLFCVLPWLTM 437 (579)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~g~~~~~~~~~~ 437 (579)
.+..+. ....++.++++|+++.+.++..++-..++.+.. |.|..- . +-...-.|++++.+.+..
T Consensus 227 ~~~~~~------------~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~--~~~~~P~GlIFssFM~a~ 291 (354)
T PF05631_consen 227 SSLSGS------------FREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-P--DDEELPLGLIFSSFMVAM 291 (354)
T ss_pred cchHHH------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-C--CCCCCCchHHHHHHHHHH
Confidence 111110 012356688899999999999999999888776 455443 2 112345799999999999
Q ss_pred HHHHHHHHHHhhhh
Q 008070 438 AVFANMGGWIADTL 451 (579)
Q Consensus 438 ~ig~~~~g~l~dr~ 451 (579)
++|+.+..++..+.
T Consensus 292 MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 292 MLGSSLFSRLLSKS 305 (354)
T ss_pred HHHHHHHHHHHhCC
Confidence 99998887665543
No 125
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.34 E-value=6.6e-11 Score=124.52 Aligned_cols=188 Identities=18% Similarity=0.097 Sum_probs=132.8
Q ss_pred hhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcch
Q 008070 379 IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 458 (579)
Q Consensus 379 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~ 458 (579)
.+++.+++++.++.+.+..++..++.......+|.+.++ ++.++.+.|++.+...++.+++.++.|+++||+++|+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~ 86 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL 86 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence 345656678888888888888888888888889988877 6779999999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHH
Q 008070 459 TAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFG 537 (579)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig 537 (579)
.+. .+.+++.+...... ....+..+...+. +..+.+.............+.+++++++++.++.+....+|..+|
T Consensus 87 ~~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 162 (417)
T PRK10489 87 LAR--GTCGLGFIGLALNA--FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVIS 162 (417)
T ss_pred ehH--HHHHHHHHHHHHHH--HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhH
Confidence 532 22222222211111 1112222333222 222322222222333334455677889999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 538 TAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 538 ~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
|.++|.+.+..+|++.|.+.++..+++.++.+.+
T Consensus 163 ~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (417)
T PRK10489 163 PALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL 196 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999998899999988887777666655544
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.32 E-value=2.7e-11 Score=133.73 Aligned_cols=142 Identities=13% Similarity=0.128 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
..+.+..++..+...++.++.|+++||+|||++++++.++.+++.++.++.+ +...+++.+++.|++.+..++...++
T Consensus 595 ~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~ 672 (742)
T TIGR01299 595 YMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666777788888999999999999999999999999999999999988 77778888899999888889999999
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCC
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSS 351 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~ 351 (579)
++|++|.++|++++|+..++..+|.++||++++.+... +...+|++.+++.++.+++.++ +||+
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET 736 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDT 736 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 99999999999999999999999999999999988764 4566777777766665555554 3543
No 127
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.31 E-value=1.8e-10 Score=121.90 Aligned_cols=171 Identities=14% Similarity=0.042 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 467 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~ 467 (579)
..++..++..++.++....+..++|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+|+.+..+. .+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~--~~~~ 99 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL--IATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHH--HHHH
Confidence 344455555565555556677788888877 8999999999999999999999999999999999997654322 1111
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHH-HHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 468 IGFLGPAFFLTQLSHVRTPAMAVLCM-ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
++ .......+..+...+.. +.+.+.+...........+.+++++|++++|+.+....+|..+++.+.+.+.+
T Consensus 100 ~~-------~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 100 II-------NILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HH-------HHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111122333333222 22222222223333334455677899999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHH
Q 008070 547 RGSWDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 547 ~~g~~~~~~~~~~~~~l~~~~~ 568 (579)
..||+..|.+.+++.++..++.
T Consensus 173 ~~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 173 HYGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887765554433
No 128
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=5.3e-11 Score=118.57 Aligned_cols=179 Identities=12% Similarity=0.105 Sum_probs=135.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 467 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~ 467 (579)
..+....+.+..+++.--.+..-.|...++ .++|.++.|.+.+.+.+...++-++.|.++||.+.|..+ .
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm---------~ 98 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM---------A 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee---------h
Confidence 334444555555555555555566666666 789999999999999999999999999999999999544 3
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhh-hhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH--HHH
Q 008070 468 IGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSG-LYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT--GYI 544 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~--g~l 544 (579)
.++++.++..+.+...+...++.++..+.+.+.+...+. .-.+..-.++++||+..++-|+..++|+++.|++. +++
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 444444555445555556666666666655555555444 44455667889999999999999999999999999 999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 008070 545 LQRGSWDDVFKVAVVLYIIGTLVWNLFATGER 576 (579)
Q Consensus 545 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 576 (579)
..+++|+.+|++-+++.++..++.+...|+++
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999998888777777766554
No 129
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.30 E-value=1.9e-10 Score=120.15 Aligned_cols=171 Identities=16% Similarity=0.206 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHH
Q 008070 391 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 470 (579)
Q Consensus 391 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 470 (579)
+.+....++...+.+....+++.|+++++|++..+.|+..+...+...+..++.|+++||+++|+.+..+. ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~-------~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGM-------LM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHH-------HH
Confidence 45567777788888888999999998889999999999999999999999999999999999997654322 11
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhh-hhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 471 LGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSG-LYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
.......... .+..+...+...+.+...+...+. .....+..+++++++++|+.+....+|..+||.++|++. ..|
T Consensus 86 ~~~~~~~~~~--~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 86 RAAGFATMAI--AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 1111111111 223333333333322222333333 333455567899999999999999999999999999999 679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 008070 550 WDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
|+..|++.+++.++..++....
T Consensus 163 ~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998887776665544333
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.29 E-value=1.7e-10 Score=120.66 Aligned_cols=177 Identities=16% Similarity=0.154 Sum_probs=122.4
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHH
Q 008070 386 SKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIM 465 (579)
Q Consensus 386 ~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~ 465 (579)
.++++..+.+..++...+.......+|.++.+.+|.++.+.|++.+...++..++.++.|+++||+|||+++..+. ..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~--~~ 90 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGL--CG 90 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHH--HH
Confidence 3566777888888888888888889999988889999999999999999999999999999999999998765432 11
Q ss_pred HHHHHHHHHHHHHHhhc--cchhHHHHH-HHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQLSH--VRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATG 542 (579)
Q Consensus 466 ~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g 542 (579)
..++.+...... .... .......++ -++.+.+.....+.......+..++++|++++++......+|..+++.+++
T Consensus 91 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 169 (399)
T PRK05122 91 CALSGLLYLLAG-LLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGV 169 (399)
T ss_pred HHHHHHHHHHhh-hhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHH
Confidence 111111111110 0000 011222222 233333333333333333445577899999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHH
Q 008070 543 YILQRGSWDDVFKVAVVLYIIGT 565 (579)
Q Consensus 543 ~l~~~~g~~~~~~~~~~~~~l~~ 565 (579)
.+.+..||+..+.+..++.++..
T Consensus 170 ~l~~~~g~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 170 LLYHWGGLAGLGLLIMLLALLGL 192 (399)
T ss_pred HHHHcccHHHHHHHHHHHHHHHH
Confidence 99999999988877666554433
No 131
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.28 E-value=2.7e-10 Score=120.11 Aligned_cols=177 Identities=15% Similarity=0.201 Sum_probs=121.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-hccCcchHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIM 465 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~~~~ 465 (579)
.+.++.++...+...+.++++..++|.|+.+.+|+++.+++.+.....+...++.+++|+++||+ |+|+.+..+. .+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~--il 85 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGA--LL 85 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHH--HH
Confidence 44566677777778888999999999999988999999999999999999999999999999999 9997654432 11
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCC--chhHHHHHHHHHHHHHHHHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPR--YAGVLLGLSNTAGVLAGVFGTAATG 542 (579)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~g~~~g~~~~~~~lg~~ig~~l~g 542 (579)
..++.+ ++...........+....+..+. +...+.... ..+..+++ .|.+++++.....++|+.++|.+.|
T Consensus 86 ~~lg~l-----ll~~~~~~~~~~~l~l~li~iG~-G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 86 MAIGHV-----VLGASEIHPSFLYLSLAIIVCGY-GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHH-----HHHHhhcchhHHHHHHHHHHHhc-ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 111111 11111111111111111111222 222222222 33444543 6899999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 543 YILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 543 ~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
++.+..||+..|.+.++.++++.+.++..
T Consensus 160 ~L~~~~Gw~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 160 YAQEEYSWAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHhhhChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999877766666655443
No 132
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.27 E-value=7.1e-11 Score=124.07 Aligned_cols=144 Identities=16% Similarity=0.215 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc--cCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~--~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
..+.++..+...++.++.|++.||+|+|++++++.++.+++..+...... .+++.+++.+++.|++.+...+....++
T Consensus 254 g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i 333 (418)
T TIGR00889 254 SIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFV 333 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555566667789999999999999999999999888777766421 0245677889999999998889999999
Q ss_pred hcccCcCchhHHHHHHH-HHHHHHHHHHHHHHHHhhcc------cCcchHHHHhhHHHHHHHHHHHhhhcCCC
Q 008070 287 SKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQK------FGWPSVFYSFGSLGSIWFALWLKKAYSSP 352 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~-~~~~lG~~lgp~i~~~l~~~------~gwr~~f~i~~~~~li~~~l~~~~~~~~~ 352 (579)
.+++|+++|++++|+.+ ...++|.++||+++|++.+. +||++.|++.+++.++..++.+++.+++.
T Consensus 334 ~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 334 EKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999997 67889999999999999987 46999999998888888887777777553
No 133
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.27 E-value=2.5e-10 Score=121.77 Aligned_cols=176 Identities=14% Similarity=0.120 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh-hhccCcchHHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVRKI 464 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~~~~~ 464 (579)
+.++.+.+..++..++++++..++|.|+++. +|++..+++.+.....++..++.+++|+++|| +|+|+.+..+.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~--- 86 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG--- 86 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH---
Confidence 3456666777777889999999999999987 89999999999999999999999999999999 89997654332
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCC---chhHHHHHHHHHHHHHHHHHHHH
Q 008070 465 MQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPR---YAGVLLGLSNTAGVLAGVFGTAA 540 (579)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~g~~~g~~~~~~~lg~~ig~~l 540 (579)
.+...+..+.... .+.....+...+.+.+. +...+.... ..+..+++ .|++++++.+...++|.++||.+
T Consensus 87 ----~~~~~g~~~~~~~-~~~~~~~~~~~l~g~g~-g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l 160 (475)
T TIGR00924 87 ----IVLMLGHFMLAMS-IYPDLIFYGLGTIAVGS-GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL 160 (475)
T ss_pred ----HHHHHHHHHHHhc-ccHhHHHHHHHHHHhcc-ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH
Confidence 1111111111111 11222222222333332 222233332 33334443 48889999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 541 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 541 ~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
.|++.+..||+..|.+.++..+++.+.+...+
T Consensus 161 ~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 161 AGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999998877766655554443
No 134
>PRK10504 putative transporter; Provisional
Probab=99.26 E-value=4e-10 Score=120.58 Aligned_cols=176 Identities=18% Similarity=0.298 Sum_probs=126.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
.+.+|.+.+..++.....+.+..++|.+.++ +|.++.+.+++.+...++..++.++.|+++||+|+|+....+. .+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~--~~~ 85 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI--VLF 85 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH--HHH
Confidence 3456777788888888888888899999987 8999999999998888999999999999999999997654321 111
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
.++. ..... ..+...+.+...+.+.+.....+.......+..+++++++++|+.+....+|..++|.+.|.+.+
T Consensus 86 ~~~~-----~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 86 TLGS-----LFCAL-SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHH-----HHHHH-hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 1111 11111 12222333333333443333333333334555677889999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 547 RGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 547 ~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
..||++.|.+...+.+++.++....
T Consensus 160 ~~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 160 YASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999877776666555544
No 135
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=2.8e-10 Score=118.72 Aligned_cols=174 Identities=15% Similarity=0.145 Sum_probs=116.2
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHH
Q 008070 386 SKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIM 465 (579)
Q Consensus 386 ~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~ 465 (579)
.++.++.+.+..++...+.......+|.++.+++|.+..+.|++.+...++..+++++.|+++||+|||+.+..+. ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~--~~ 90 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM--LA 90 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH--HH
Confidence 3555666666777777777777788898888779999999999999999999999999999999999998655432 11
Q ss_pred HHHHHHHHHHHHHH-hhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQ-LSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY 543 (579)
Q Consensus 466 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~ 543 (579)
..++.+...+.... .......+..++. .+.+.+.....+.......+..++++|++++|+......++..++|++++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 91 CGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 11111111010000 0011122222222 233333332233333334455788999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHHH
Q 008070 544 ILQRGSWDDVFKVAVVLY 561 (579)
Q Consensus 544 l~~~~g~~~~~~~~~~~~ 561 (579)
+.+..||+..+.+..++.
T Consensus 171 l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 171 LHSHFGFAALALTTMVLP 188 (392)
T ss_pred HHhccChHHHHHHHHHHH
Confidence 999899987766554443
No 136
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.26 E-value=2.5e-10 Score=117.35 Aligned_cols=175 Identities=16% Similarity=0.065 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHH
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 471 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 471 (579)
.+.+..++..++.......+|.|..+ .+.++.+.+++.+...++.+++.++.|+++||+|||+.+..+. .+..++.+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~--~~~~~~~~ 79 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGAD--LIRAVLVA 79 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHH--HHHHHHHH
Confidence 35566667777777778888998887 7899999999999999999999999999999999998654322 11111111
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 472 GPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
.... .........+...+...+.+.......+.... ..+..++++|++++|+.+....+|..++|.+.+.+.+..||
T Consensus 80 ~~~~--~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 157 (365)
T TIGR00900 80 VLPF--VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI 157 (365)
T ss_pred HHHH--HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 1111 11111113333333333333333333333333 44556778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 008070 551 DDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 551 ~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+..|++.++..+++.++...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 158 KWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999988877776665555444
No 137
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.25 E-value=6e-10 Score=119.59 Aligned_cols=180 Identities=15% Similarity=0.203 Sum_probs=117.9
Q ss_pred Hhhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh-hhccCcchHHH
Q 008070 384 ILSKA-PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAV 461 (579)
Q Consensus 384 l~~~~-~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~~ 461 (579)
.+++| .++..++..++..++++.+..+++.|+++.+|++..+++.+............+++|+++|| +|+|+.+..+.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~ 95 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 34565 48888888888999999999999999988899999988887777665555556789999999 59997654332
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCC--chhHHHHHHHHHHHHHHHHHHH
Q 008070 462 RKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR--YAGVLLGLSNTAGVLAGVFGTA 539 (579)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~ig~~ 539 (579)
.+..++ ..+..........+.+.....+.+.+...+.......+..+++ .++.++++.+...++|.+++|.
T Consensus 96 --~~~~ig-----~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 96 --IVLAIG-----YALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred --HHHHHH-----HHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHH
Confidence 111111 1111111111112222222223322222222222333334433 3456788889999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 008070 540 ATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 540 l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
+.|++.+..||+..|.+.++..+++.+.+++
T Consensus 169 i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 169 ATPWLAAKYGWSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988766666544433
No 138
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.24 E-value=2.6e-10 Score=120.05 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=120.5
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHH
Q 008070 384 ILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRK 463 (579)
Q Consensus 384 l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~ 463 (579)
.+++|.+|.+.+..++...+...+..++|.|+.+++|+++.+.|++.+...++..+++++.|+++||+|+|+.+..+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~ 85 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISG 85 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 46789999999999999988888899999999998999999999999999999999999999999999999765432111
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhh----hhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHH
Q 008070 464 IMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDA----FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTA 539 (579)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~ 539 (579)
.. ++.. ............... ......+..... ...+......++ .+++++..+|.......+|..++|+
T Consensus 86 ~~--~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~~~ 159 (420)
T PRK09528 86 LL--VLFG--PFFIYVFAPLLQYNI-LLGAIVGGIYLGFGFLAGAGAIEAYIER-VSRRSGFEYGRARMWGSLGWALCAF 159 (420)
T ss_pred HH--HHHH--HHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhccchhhhhhHHHH-HHhhccccchhhHHhhhHHHHHHHH
Confidence 11 0000 000000000000000 011111111111 111111112222 1345677888888999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 540 ATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 540 l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+.|.+.+. +|+..|++.+++.++..++.+...
T Consensus 160 ~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 160 IAGILFNI-NPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHHHHhc-CchHhHHHHHHHHHHHHHHHhccc
Confidence 99999874 788899888877777666655544
No 139
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.23 E-value=5.5e-10 Score=115.89 Aligned_cols=171 Identities=13% Similarity=0.030 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHH
Q 008070 393 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLG 472 (579)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 472 (579)
.....++...........+|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+. .+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~-------~~~~ 81 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGL-------FIFA 81 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH-------HHHH
Confidence 3333344444555555566766665 8999999999999999999999999999999999997654321 1111
Q ss_pred HHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 473 PAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
....... ..+..+...+. ++.+.+.............+..++++|++++|+.+....+|..+++.+.+.+.+..+|+
T Consensus 82 ~~~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 159 (385)
T TIGR00710 82 LSSLGLA--LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWH 159 (385)
T ss_pred HHHHHHH--HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 1111111 12233333333 33333333333333333445567789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 008070 552 DVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 552 ~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
..+.+.+++.++..++.....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 160 AIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 9999888877776665554433
No 140
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.23 E-value=3.2e-10 Score=115.91 Aligned_cols=167 Identities=17% Similarity=0.317 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHH
Q 008070 394 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGP 473 (579)
Q Consensus 394 ~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 473 (579)
++..++...........+|.++.+.+|.+..+.+++.+...++..++.++.|+++||+|+|+.+..+. .+...
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~-------~~~~~ 74 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGL-------LLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHH-------HHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehh-------hhhhh
Confidence 34556666667777777886666769999999999999999999999999999999999997544322 11111
Q ss_pred HHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Q 008070 474 AFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDV 553 (579)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~ 553 (579)
........ .+.+.+.+..++.+.+.....+.......+..++++|++++|+.+....+|..++|.+++.+.+..+|+..
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~ 153 (352)
T PF07690_consen 75 GSLLLAFA-SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWA 153 (352)
T ss_dssp HHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCH
T ss_pred HHHHhhhh-hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccc
Confidence 11111111 33333333333444443344444444455556778999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHH
Q 008070 554 FKVAVVLYIIGTLVW 568 (579)
Q Consensus 554 ~~~~~~~~~l~~~~~ 568 (579)
|++.+++.++..++.
T Consensus 154 ~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 154 FLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhH
Confidence 999999988887753
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.23 E-value=5.9e-10 Score=116.15 Aligned_cols=172 Identities=15% Similarity=0.097 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 469 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 469 (579)
++.+.+..++.....+.....+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|+|+++..+. ....++
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~ 87 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF--VLFIAS 87 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH--HHHHHH
Confidence 3444444444333333344456766665 8999999999999999999999999999999999997654332 111111
Q ss_pred HHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008070 470 FLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG 548 (579)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~ 548 (579)
. .. ....++.+...+. ++.+.+.....+.......+..++++|++++|+......+|..++|++.+.+.+..
T Consensus 88 ~-----~~--~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~ 160 (390)
T PRK03545 88 H-----VL--SALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL 160 (390)
T ss_pred H-----HH--HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 1 11 1112233333333 33333332222333333445567899999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHh
Q 008070 549 SWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 549 g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
||+..|++.+++.++..++....
T Consensus 161 gw~~~f~~~~~~~~l~~~~~~~~ 183 (390)
T PRK03545 161 GWRTTFLAIGGGALITLLLLIKL 183 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888877766554443
No 142
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.23 E-value=5.5e-10 Score=115.05 Aligned_cols=162 Identities=12% Similarity=0.055 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 008070 402 WGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS 481 (579)
Q Consensus 402 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (579)
.....+...+|.+.++ +|+++.+.|++.+...++..++.+..|++.||+|||++... .+.......... ..
T Consensus 5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~-------~~~~~~~~~~~~-~~ 75 (368)
T TIGR00903 5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFG-------SLATFAAAAGRL-LD 75 (368)
T ss_pred HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH-------HHHHHHHHHHHH-HH
Confidence 3445556677777776 89999999999999999999999999999999998854321 111111111111 11
Q ss_pred ccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 008070 482 HVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 561 (579)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~ 561 (579)
..+...+.+.-++.+.+. +...+......+..|+++|++++++.+....+|..+++.+.+++.+..||+..|.+.+++.
T Consensus 76 ~~~~~~l~~~R~l~G~g~-~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~ 154 (368)
T TIGR00903 76 PFNYEWLLACQLLAALGQ-PFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVA 154 (368)
T ss_pred hccHHHHHHHHHHHHhHh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 112222222233333333 2333444445666888999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHhhc
Q 008070 562 IIGTLVWNLFAT 573 (579)
Q Consensus 562 ~l~~~~~~~~~~ 573 (579)
++..+++.+..+
T Consensus 155 ~~~~~~~~~~lp 166 (368)
T TIGR00903 155 AAGIILVLAALP 166 (368)
T ss_pred HHHHHHHHHHcC
Confidence 776665555444
No 143
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.21 E-value=9.9e-10 Score=117.37 Aligned_cols=178 Identities=12% Similarity=0.179 Sum_probs=122.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh-hhccCcchHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT-LVSKGLSITAVRKIM 465 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~~~~~~ 465 (579)
.+.++.++...+.-.+++|++..+++.|+++.+|++..+++++.....+...+..+++|+++|| +|+|+.+..+. .+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~--~~ 90 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA--IV 90 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH--HH
Confidence 3456777778888889999999999999999899999999988888887788888899999999 99998766543 12
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCC--chhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPR--YAGVLLGLSNTAGVLAGVFGTAATGY 543 (579)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~ig~~l~g~ 543 (579)
..++.+... ........+.+.....+.+.+...+.......+.+|++ +++.++++.....++|.++||.++|+
T Consensus 91 ~~~g~~~~~-----~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~ 165 (489)
T PRK10207 91 LAIGYFMTG-----MSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPV 165 (489)
T ss_pred HHHHHHHHH-----HhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 222221111 11111111212222233333333333333344445555 45778999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 544 ILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 544 l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+.++.||++.|++.++..+++.+.+...
T Consensus 166 l~~~~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 166 IADKFGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999998766555555444443
No 144
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.20 E-value=9.6e-10 Score=114.26 Aligned_cols=173 Identities=14% Similarity=0.116 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 467 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~ 467 (579)
+.++.+.+..++...........+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~------ 75 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLV------ 75 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHH------
Confidence 456667777777777777888888887766 8999999999999999999999999999999999997654322
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 468 IGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
.+......+ ....++.+...+. ++.+.+.............+..+++++++++++......++..+++++.+++.+
T Consensus 76 -~~~~~~~~l--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 76 -ALCVIGNAM--FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred -HHHHHHHHH--HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 111111111 1122233333333 333333332222222223344566789999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHH
Q 008070 547 RGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 547 ~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
..+|+..|.+.+++.++..+....
T Consensus 153 ~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 153 EFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999988877666554433
No 145
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.20 E-value=1.3e-09 Score=114.24 Aligned_cols=173 Identities=18% Similarity=0.177 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhh-----hhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE-----SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRK 463 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-----~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~ 463 (579)
.+..+.+..++...+......++|.|.++ +|.+..+ .+++.++..++..++.++.|+++||+|+|+.+..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~-- 91 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA-- 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH--
Confidence 44455666677777777788899999987 7888654 478888888999999999999999999997654321
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 464 IMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY 543 (579)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~ 543 (579)
....+ ...+.. .....+...+...+.+......+.......+..++++|++++|+.+....+|..++|.+.+.
T Consensus 92 ~~~~~-----~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (408)
T PRK09874 92 LGMGI-----VMVLMG--LAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGL 164 (408)
T ss_pred HHHHH-----HHHHHH--HHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 111111 11223323222222222223333333334455677899999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 544 ILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 544 l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+.+..+|+..|.+.+++.+++.++..+.
T Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 165 LADSYGLRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888877766655444
No 146
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=1.7e-09 Score=112.74 Aligned_cols=157 Identities=11% Similarity=0.094 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 403 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH 482 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (579)
..+.....+|.+.++ +|+++.+.++..+...++..++.++.|++.||+|||+.+..+. .+..+ ...... .
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~--~~~~~-----~~~~~~--~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFA--VLLTL-----SCLLVS--F 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHH--HHHHH-----HHHHHH--H
Confidence 334444567777666 8999999999999999999999999999999999997654332 11111 111111 1
Q ss_pred cchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 008070 483 VRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 561 (579)
Q Consensus 483 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~ 561 (579)
.++.+..++. ...+.+.....+.......+.+++++|++++++......++..++|++++.+.+..||+..|++.+++.
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~ 184 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMG 184 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 2333333333 333433333333333334555778999999999999999999999999999999999999999988776
Q ss_pred HHHHHHHH
Q 008070 562 IIGTLVWN 569 (579)
Q Consensus 562 ~l~~~~~~ 569 (579)
+++.++..
T Consensus 185 ~~~~l~~~ 192 (394)
T PRK10213 185 VLCIFWII 192 (394)
T ss_pred HHHHHHHH
Confidence 66554433
No 147
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.19 E-value=1.6e-09 Score=116.49 Aligned_cols=175 Identities=15% Similarity=0.133 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.+..+++..++...-...+...+|.+..+ +|.+..+.+++...+.++..++.++.|+++||+|||+.+..+. .+..+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~--~~~~~ 83 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG--TLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH--HHHHH
Confidence 34556666666666677777888988877 8999999999999999999999999999999999997654332 11111
Q ss_pred HHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 469 GFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDI-GPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
+.+. ....++.+..++. .+.+.+.....+.......... ++++|++++|+......+|..+||.++|++.+
T Consensus 84 ~~~~-------~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 84 ASLA-------AAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHH-------HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1111 1112333333333 3334443333333333344444 56899999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 547 RGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 547 ~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
+.||++.|++...+.++..++..+..+
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999988777766655555433
No 148
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.19 E-value=2e-08 Score=101.99 Aligned_cols=302 Identities=10% Similarity=0.073 Sum_probs=196.6
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY 303 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~ 303 (579)
++...+.|..+.|++++++.+...+..++.-+.+ +...+-+..++.|++.+. ..+..+++-...|+++-.++.+...
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~r 135 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTR 135 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHH
Confidence 5677899999999999999999999999999998 899999999999999884 6888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc--cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCC---hhh-c-----HHHHhhhhc---C
Q 008070 304 SGMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLGSIWFALWLKKAYSSPKED---PEL-R-----AEEKRHILG---G 369 (579)
Q Consensus 304 ~~~~lG~~lgp~i~~~l~~~--~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~---~~~-~-----~~~~~~~~~---~ 369 (579)
...-+|..++.++|..++.. .+++...++......+.+++.+++ |..++.. +.. . +.+.+...+ .
T Consensus 136 aa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL-P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~ 214 (412)
T PF01770_consen 136 AATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL-PMPKRSLFFHRKPPAEQDANESESDKMNESPES 214 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCcccceeccCcccccccccccccccccccc
Confidence 99999999999999988763 334445444444334444444444 3322210 000 0 000000000 0
Q ss_pred ---Cccccc----c-------cchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChhhhhHHhHHH
Q 008070 370 ---SISKEA----V-------SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFNLTESGLFCVLP 433 (579)
Q Consensus 370 ---~~~~~~----~-------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~g~~~~~~ 433 (579)
..+... . -...++...++|.++...+-..+...+++-+..|......+. -+-....-|.+-+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~ 294 (412)
T PF01770_consen 215 SSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAAS 294 (412)
T ss_pred ccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHH
Confidence 000000 0 123455666788888888888888888888888888777764 233445568888888
Q ss_pred HHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhh-hhhhcc
Q 008070 434 WLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSG-LYSNHQ 512 (579)
Q Consensus 434 ~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 512 (579)
.+.+.++.+..|++..++.+... ..++...++.+..++........+...+..++......+..+. ...+..
T Consensus 295 tllgA~~al~~g~v~~~w~~~~~-------l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 295 TLLGAIAALLAGYVKVNWDRWGE-------LALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred HHHHHHHHHHHhHhhcchHHHHH-------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999988555544322 2222333333333344445555666555555544444433333 333555
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHH
Q 008070 513 DIGPRYAGVLLGLSNTAGVLAGVF 536 (579)
Q Consensus 513 ~~~~~~~g~~~g~~~~~~~lg~~i 536 (579)
....+.-|-++|+++++..+-..+
T Consensus 368 ~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 368 NLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred hccccceeeeeeeHHHHHHHHHHh
Confidence 566677788888877765554433
No 149
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.18 E-value=1.4e-09 Score=112.20 Aligned_cols=170 Identities=15% Similarity=0.163 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.++..++..++.+...+.+..++|.++++.+|+++.+.+++.+...++.+++.++.|++.||+|+|+.+..+. .+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~i 79 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL--LLLAI 79 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH--HHHHH
Confidence 3456667777777777888888898777779999999999999999999999999999999999997654332 11111
Q ss_pred HHHHHHHHHHHhhccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 469 GFLGPAFFLTQLSHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
+. .+.... ....+.. +..++.+.+ .....+......+..++++|+++.++......+|..+++.+.+.+...
T Consensus 80 ~~-----~~~~~~-~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 80 PC-----LWAGLA-VQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred HH-----HHHHHH-hhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 11 111111 1022222 222223322 223333333445556778999999999988888888888887776652
Q ss_pred ----------CChHHHH-HHHHHHHHHHHHH
Q 008070 548 ----------GSWDDVF-KVAVVLYIIGTLV 567 (579)
Q Consensus 548 ----------~g~~~~~-~~~~~~~~l~~~~ 567 (579)
.+|++.| ...+++.++..++
T Consensus 153 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 183 (366)
T TIGR00886 153 LIFGAGLPAHLAWGWAFVIVPAGILLLPALL 183 (366)
T ss_pred HHhcccccccccccchhHHHHHHHHHHHHHH
Confidence 3788888 4334444333333
No 150
>PRK11043 putative transporter; Provisional
Probab=99.18 E-value=2.2e-09 Score=112.23 Aligned_cols=167 Identities=10% Similarity=0.048 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHH--HHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHH
Q 008070 399 CHNWGTFILLTWMPTY--YNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFF 476 (579)
Q Consensus 399 ~~~~~~~~~~~~~p~~--l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 476 (579)
+...+......+.|.+ +.+.+|.++.+.+++.++..++..++.++.|+++||+|+|+.+..+. .+......
T Consensus 14 ~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~-------~~~~~~~~ 86 (401)
T PRK11043 14 LSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGL-------SLFALGSL 86 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHH-------HHHHHHHH
Confidence 3344444445555544 44558999999999999999999999999999999999997654321 11111111
Q ss_pred HHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 008070 477 LTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKV 556 (579)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~ 556 (579)
.... ..+.+.+.+..++.+.+.............+..++++++...+..+....++..++|.+.+++.+..||+..|++
T Consensus 87 ~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~ 165 (401)
T PRK11043 87 GMLW-VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFAT 165 (401)
T ss_pred HHHH-hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Confidence 1111 122222222223333332222222222344556677788889998888999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhhc
Q 008070 557 AVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 557 ~~~~~~l~~~~~~~~~~ 573 (579)
.+++.++..++.+.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 166 LFAITLLLILPTLRLKP 182 (401)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 88877776666555443
No 151
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.18 E-value=1.5e-09 Score=113.98 Aligned_cols=173 Identities=13% Similarity=0.048 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 469 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 469 (579)
++...+.+++.+.....+....| .+++++|++..+.+++.+...++..++.++.|++.||+|+|+.+..+. .
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~-------~ 81 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIM-------V 81 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHH-------H
Confidence 33344444444444455555556 566669999999999999999999999999999999999997543221 1
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh---
Q 008070 470 FLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ--- 546 (579)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~--- 546 (579)
+......+... ..+...+.+.-++.+.+.....+.......+..++++|++++|+.+....+|..+++.+.+++.+
T Consensus 82 ~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 82 LWGIASTATMF-ATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHH-hcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11111111111 12222333333333444433333333334555677899999999999999999999999999875
Q ss_pred ---cCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 547 ---RGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 547 ---~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
..||+..|.+.++..++..++..++
T Consensus 161 ~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 161 LMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 3699999999887776655544444
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=2.2e-09 Score=108.38 Aligned_cols=177 Identities=17% Similarity=0.147 Sum_probs=136.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
...++.+.+..|......+.....+|...+| +|.+...+|.+.+.+.++..++.++...+.+|+.||+++....
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l----- 85 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLL----- 85 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH-----
Confidence 3456778888888999999999999999999 8999999999999999999999999999999999997654321
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
.+....- ......+++...++. ++.+...+.+.........+.+||++|+++++++.+...++..+|.+++.++-
T Consensus 86 --~lFi~~n--~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 86 --ALFIVSN--LLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred --HHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 1111111 111122334443333 33344443444444445666689999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 546 QRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 546 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
|..||+..|+..+++.+++.+..+...+
T Consensus 162 ~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 162 QLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999888877766655
No 153
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.17 E-value=2.6e-09 Score=111.40 Aligned_cols=173 Identities=15% Similarity=0.106 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 469 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 469 (579)
+....+..+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+..+. .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~-------~ 76 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGA-------A 76 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHH-------H
Confidence 3444455555555656666778887777 8999999999999999999999999999999999997554321 1
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 470 FLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
........... ..+.....+..++.+.+.............+..++++|+++.++.+....++..++|.+.+.+.+..+
T Consensus 77 ~~~i~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 77 LFIIASLLCSL-AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred HHHHHHHHHHH-hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 11111111111 11222222222333333322233333344555678999999999999999999999999999988899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 008070 550 WDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
|+..+++.+++.++..++.+..
T Consensus 156 ~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 156 WQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888777666654444
No 154
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.17 E-value=9.1e-10 Score=118.19 Aligned_cols=172 Identities=15% Similarity=0.194 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHH
Q 008070 391 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 470 (579)
Q Consensus 391 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 470 (579)
..+++..++...........+|.+.++ +|.+..+.+++.+...++.+++.++.|++.||+|||+.+..+. .+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~-------~~ 76 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST-------FA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH-------HH
Confidence 344555566666666677778887777 8999999999999999999999999999999999997654322 11
Q ss_pred HHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 471 LGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
...... .....++....++. .+.+.+.....+.......+..++++|++++++......+|..++|.++|++.++.+
T Consensus 77 ~~~~~~--~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 154 (485)
T TIGR00711 77 FTLGSL--LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH 154 (485)
T ss_pred HHHHHH--HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC
Confidence 111111 11122233333333 333333333333444445556778999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 008070 550 WDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
|++.|++.+.+.++..++..+..
T Consensus 155 w~~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 155 WRWIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred ceehhhhhhHHHHHHHHHHHHHc
Confidence 99999988877766665554443
No 155
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.17 E-value=1.7e-09 Score=111.83 Aligned_cols=169 Identities=11% Similarity=0.074 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHH
Q 008070 394 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGP 473 (579)
Q Consensus 394 ~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 473 (579)
.+..++...+.......+|.|+++++|.+..+.|++.+...+...+..++.|+++||+|+|+.+... +......
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~------~~~~~~~ 76 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILF------CCLLAAL 76 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH------HHHHHHH
Confidence 4556777777888888999999888999999999999999999999999999999999998753321 1111111
Q ss_pred HHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccc-cCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 474 AFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQD-IGPRYAGVL--LGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~--~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
...+. ...++++...+. .+.+.+.. ...+.......+ .+++.|+.+ .+.......+|..++|.+.+.+.+..|
T Consensus 77 ~~~~~--~~~~~~~~l~~~~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~ 153 (375)
T TIGR00899 77 ACLLF--AWNRNYFLLLVLGVLLSSFAS-TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG 153 (375)
T ss_pred HHHHH--HhcchHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc
Confidence 11111 112233322222 22222222 223333333333 344445433 677788889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 008070 550 WDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
|+..|++.+++.++..++..+.
T Consensus 154 ~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 154 FTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888777666655443
No 156
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.16 E-value=1.8e-09 Score=112.96 Aligned_cols=175 Identities=13% Similarity=0.093 Sum_probs=113.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
.+.+....+..++...+.+....+++.++++ +|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+. .+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~--~~~ 88 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGL--LLW 88 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH--HHH
Confidence 3455666677777777777777788988876 7999999999999999999999999999999999998654332 111
Q ss_pred HHHHHHHHHHHHHhhccchhHHHH-HHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHH-HHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAG-VFGTAATGYI 544 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~-~ig~~l~g~l 544 (579)
.++.+ ...........++... ...+.+.+.............+..++++|++++|+.+....+|. .++|.+.+.+
T Consensus 89 ~~~~~---~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 89 CVGHA---AFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred HHHHH---HHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 1101011112232222 22223333322223333334455688999999999999999986 5899999999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHH
Q 008070 545 LQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 545 ~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
.+..|+...++....+.+++.++
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~ 188 (402)
T TIGR00897 166 IPAFGEMNTLWSALAFVLTGGVI 188 (402)
T ss_pred ccccchHHHHHHHHHHHHHHHHH
Confidence 98888766555444433333333
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.16 E-value=1.2e-09 Score=114.14 Aligned_cols=179 Identities=14% Similarity=0.122 Sum_probs=118.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
+|.+|.+....++.+.+...+..++|.|+.+++|+++.+.+++.+...++..+++++.|+++||+|||+.+..... .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~--~- 77 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS--G- 77 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH--H-
Confidence 5778889999999999999999999999998899999999999999999999999999999999999986543211 1
Q ss_pred HHHHHHHHHHHHHhhc---cchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSH---VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY 543 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~ 543 (579)
..+............ ........+...+.+.......+.......+.. +.++..+|.......+|.+++|.++|.
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~g~ 155 (396)
T TIGR00882 78 -LLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASIAGI 155 (396)
T ss_pred -HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHHHhh
Confidence 111111111111110 001111111111111111222222222222222 334567788888889999999999998
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 544 ILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 544 l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+.+ .+|+..|++.+++.++..++.+..
T Consensus 156 l~~-~~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 156 LFS-IDPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred hhc-cCchHHHHHHHHHHHHHHHHHHHh
Confidence 876 489999988888777766555443
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.15 E-value=2.9e-09 Score=113.87 Aligned_cols=161 Identities=15% Similarity=0.050 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHh
Q 008070 401 NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL 480 (579)
Q Consensus 401 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (579)
....+....++|.+.+ .+|++..+.+++.+...++..++.++.|+++||+|+|+.+..+. +..++.....
T Consensus 49 ~~~~~~~~~~~~~l~~-~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~---------~~~~~~~~~~ 118 (476)
T PLN00028 49 FVSTFAAAPLLPIIRD-NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL---------MLTAPAVFCM 118 (476)
T ss_pred HHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH---------HHHHHHHHHH
Confidence 3333444445555554 48999999999988888999999999999999999996543221 1111111111
Q ss_pred hccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh----c-----CCh
Q 008070 481 SHVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ----R-----GSW 550 (579)
Q Consensus 481 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~----~-----~g~ 550 (579)
......... +..++.+.+... ..+......+..++++||.++|+.+....+|..+++.+.+.+.. . .||
T Consensus 119 ~~~~s~~~l~~~r~l~G~~~~~-~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW 197 (476)
T PLN00028 119 SLVSSATGFIAVRFFIGFSLAT-FVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW 197 (476)
T ss_pred HHhcCHHHHHHHHHHHHHHHHh-hHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 112222222 222333333322 22233334455677899999999988888888888776665532 2 489
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 008070 551 DDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 551 ~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+..|++.+++.++..++.+++.
T Consensus 198 r~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 198 RIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998888877666655543
No 159
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.14 E-value=3e-08 Score=102.45 Aligned_cols=323 Identities=10% Similarity=0.025 Sum_probs=181.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH------hhhcc-----C--HHHHHHHHHHHHhhhhc-h
Q 008070 213 FSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP------VAARI-----G--LPFLLIMRAFMGIGEGV-A 278 (579)
Q Consensus 213 ~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~------~a~~~-----~--~~~ll~~r~l~Gig~g~-~ 278 (579)
+...+...+..+..|.+.||..|.+++..+.++.-++..+.+ +.... + ...+++.-.+.|.-.-. .
T Consensus 45 l~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las 124 (432)
T PF06963_consen 45 LVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLAS 124 (432)
T ss_pred HHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 334445556668999999999999987777655443333211 11100 1 11122222222221111 1
Q ss_pred hhHHHHHHhccc------CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhh----
Q 008070 279 MPAMNNMLSKWI------PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA---- 348 (579)
Q Consensus 279 ~~~~~~~i~~~~------~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~---- 348 (579)
.....++--||. +++.+.+.++.+.-.--+.-+++|++.|.+.+..+.+...++.++..++..++=.++.
T Consensus 125 ~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY 204 (432)
T PF06963_consen 125 IANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVY 204 (432)
T ss_pred hhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222334443 2455677788888888889999999999999988988888888777776655433222
Q ss_pred cCCCC---CChhhcHHHHhhhh-cCCc-----------ccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 349 YSSPK---EDPELRAEEKRHIL-GGSI-----------SKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 413 (579)
Q Consensus 349 ~~~~~---~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~ 413 (579)
...|. ++.....+...... .... +.-......|+..+++|.+.......+ .++...++......
T Consensus 205 ~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alal-LY~TVLsf~~lmt~ 283 (432)
T PF06963_consen 205 NSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALAL-LYFTVLSFGGLMTA 283 (432)
T ss_pred HhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHH-HHHHHhcCcHHHHH
Confidence 11111 11100000000000 0000 000111234666677776655444444 44445667778888
Q ss_pred HHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc--hhHH--H
Q 008070 414 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR--TPAM--A 489 (579)
Q Consensus 414 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 489 (579)
|+... |+++...|.+-....+.++.|.++..++.+|+|..+.-.++. ..- ..++..+.........+ .... +
T Consensus 284 yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l--~~q-~~~L~~~v~~~~~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 284 YLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSL--WWQ-WVCLALCVVSFWAPGSPFSSISAYLL 359 (432)
T ss_pred HHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHH--HHH-HHHHHHHHHHHhcCCCCchhhHHHHH
Confidence 99985 999999999999999999999999999999999776544432 211 22222222222222211 1111 1
Q ss_pred HHHHHH-HhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008070 490 VLCMAC-SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAA 540 (579)
Q Consensus 490 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l 540 (579)
+....+ =.|..++=........+.+|+++||+..|+-+...++...+.-.+
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 111111 122223333444456667888999999999999998887765544
No 160
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.14 E-value=4.6e-09 Score=109.59 Aligned_cols=177 Identities=13% Similarity=0.067 Sum_probs=113.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHH-HHHHHHHHHHHHhhhhhccCcchHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSKGLSITAVRKIM 465 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~ 465 (579)
|.+.+.+.+..++...+...+...+|.|+.+.+|.++.+.|++.+...+ +.+++.+++++ .||+|+|+.+....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~---- 88 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFC---- 88 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHH----
Confidence 6667777788888888888888999999988899999999998766555 55555555555 99999997533211
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhcccc-CCCch--hHHHHHHHHHHHHHHHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDI-GPRYA--GVLLGLSNTAGVLAGVFGTAAT 541 (579)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~~~g~~~~~~~lg~~ig~~l~ 541 (579)
.........+ ....+..+..++. ...++. .....+.......+. +++.| +...++.+....+|.+++|+++
T Consensus 89 --~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~ 163 (393)
T PRK15011 89 --CLLGVLACTL--FAWNRNYFVLLFVGVFLSSF-GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA 163 (393)
T ss_pred --HHHHHHHHHH--HHHhhHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH
Confidence 1111111111 1112223322222 222222 223333333333332 33333 4455788888999999999999
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 542 GYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 542 g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
+.+.++.||+..|++.+++.++..++.....+
T Consensus 164 ~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 164 YALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999988877766665554433
No 161
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.13 E-value=3.7e-09 Score=110.35 Aligned_cols=170 Identities=9% Similarity=0.056 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.+....+..+...+..+......|.+.++ +|++..+.+++.+...++..++.++.|+++||+|||+.+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~------- 84 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSI------- 84 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH-------
Confidence 34455556666666666666677766555 8999999999999999999999999999999999997544321
Q ss_pred HHHHHHHHHHHhhccchhHHHH-HHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 469 GFLGPAFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
.+...+..+. ......+... ..++.+.+.............+..++++|++++++.+....+|..+++.+.+.+.+.
T Consensus 85 ~~~~~~~~~~--~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 85 VLFSAGTLAC--GFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHHHHHH--HHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111111 1122233333 333333333333334444455667789999999999999999999999999999887
Q ss_pred CC--hHHHHHHHHHHHHHHHHHH
Q 008070 548 GS--WDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 548 ~g--~~~~~~~~~~~~~l~~~~~ 568 (579)
.+ |+..|.+.++..++..+..
T Consensus 163 ~~~~w~~~f~~~~~~~~~~~~~~ 185 (405)
T TIGR00891 163 WGDGWRALFFISILPIIFALWLR 185 (405)
T ss_pred cCccHHHHHHHHHHHHHHHHHHH
Confidence 65 9999887666555544433
No 162
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.13 E-value=1.5e-09 Score=111.92 Aligned_cols=159 Identities=11% Similarity=0.133 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 403 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH 482 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (579)
..+.+..+.|.+.++ +|++..+.+++.+...++..++.++.|+++||+|||+.+..+. .+..++.+.. ..
T Consensus 18 ~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~--~~~~~~~~~~-------~~ 87 (377)
T TIGR00890 18 YVYTWTLLAPPLGRY-FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGG--ILYGLGFTFY-------AI 87 (377)
T ss_pred HHhhhhhHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhH--HHHHHHHHHH-------HH
Confidence 344555566665555 8999999999999999999999999999999999998765432 1111211111 11
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 008070 483 VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYI 562 (579)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~ 562 (579)
.++.+...+...+.+...+...........+..+++|+++.++......+|..+++++.+.+.+..||+..|.+.+++.+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 88 ADSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 22333333333233222222222333333444567899999999999999998888888888888899999999888877
Q ss_pred HHHHHHHHh
Q 008070 563 IGTLVWNLF 571 (579)
Q Consensus 563 l~~~~~~~~ 571 (579)
+..++.+.+
T Consensus 168 ~~~~~~~~~ 176 (377)
T TIGR00890 168 LVIVLGAFL 176 (377)
T ss_pred HHHHHHHHh
Confidence 766555443
No 163
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.13 E-value=4.9e-09 Score=109.80 Aligned_cols=170 Identities=15% Similarity=0.143 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHH
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 471 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 471 (579)
...+..++............|.+.++ +|.++.+.+++.+...++.+++.++.|++.||+|+|+.+..+. .+..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~-- 93 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV--ALFGLF-- 93 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH--HHHHHH--
Confidence 33444444455555566667777666 8999999999999999999999999999999999998755432 111111
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 472 GPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
...... ..+...+.+..++.+.+.....+.......+..++++|++++++.+....+|..+++.+.+.+.+..+|+
T Consensus 94 ---~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 169 (406)
T PRK11551 94 ---SLATAQ-AWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWR 169 (406)
T ss_pred ---HHHHHH-hccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 111111 1222233333333333333333333334555567799999999999999999999999999888889999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 008070 552 DVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 552 ~~~~~~~~~~~l~~~~~~~ 570 (579)
..|++.+++.++..++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 170 HIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998877766555544433
No 164
>PRK03699 putative transporter; Provisional
Probab=99.12 E-value=6.5e-09 Score=108.50 Aligned_cols=173 Identities=12% Similarity=0.075 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 467 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~ 467 (579)
+.++...+..++.......+...+|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+|+.+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~------ 79 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF------ 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH------
Confidence 344555555555555556666778887765 8999999999999999999999999999999999997544321
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHH-HHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 468 IGFLGPAFFLTQLSHVRTPAMAVLCM-ACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
.+......+.. ..+..+...+.. +.+.+.............+..++++|+.+.+..+....+++.++|.+.+.+.+
T Consensus 80 -~~~~i~~~l~~--~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 80 -ALMILAVAGLM--FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred -HHHHHHHHHHH--HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111111 122333333332 33332222222233334445566889999999888889999999999998875
Q ss_pred -cCChHHHHHHHHHHHHHHHHHHHH
Q 008070 547 -RGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 547 -~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
..||+..|.+.+++.++..++.+.
T Consensus 157 ~~~gw~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK03699 157 RSIEWYWVYACIGLVYVAIFILTLF 181 (394)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHh
Confidence 479999999888777665554443
No 165
>TIGR00895 2A0115 benzoate transport.
Probab=99.11 E-value=2.4e-09 Score=111.45 Aligned_cols=164 Identities=13% Similarity=0.141 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHH
Q 008070 397 HFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFF 476 (579)
Q Consensus 397 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 476 (579)
.+...........+.|.+.++ +|++..+.+++.+...++.+++.++.|++.||+|+|+.+..+. .+..+ ...
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~--~~~~~-----~~~ 97 (398)
T TIGR00895 26 MLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI--LLFSV-----FTL 97 (398)
T ss_pred HHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH--HHHHH-----HHH
Confidence 333333444455566666655 8999999999999999999999999999999999997554322 11111 111
Q ss_pred HHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Q 008070 477 LTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFK 555 (579)
Q Consensus 477 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~ 555 (579)
+.. .....+...+. ++.+.+.....+.......+..++++|++++|+......+|..+++.+.+.+.+..||+..++
T Consensus 98 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~ 175 (398)
T TIGR00895 98 LCA--LATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFY 175 (398)
T ss_pred HHH--HccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehh
Confidence 111 12233333333 333333333333333334455667889999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHH
Q 008070 556 VAVVLYIIGTLVWNL 570 (579)
Q Consensus 556 ~~~~~~~l~~~~~~~ 570 (579)
+.+++.++..++...
T Consensus 176 ~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 176 VGGIAPLLLLLLLMR 190 (398)
T ss_pred hhhhHHHHHHHHHHH
Confidence 886555555444433
No 166
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.10 E-value=5e-09 Score=109.25 Aligned_cols=172 Identities=16% Similarity=0.164 Sum_probs=116.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
+|.++.+++..++..++........+.+..+ ++.++.+.+++.+...+...+..++.|+++||+|||+++..+.. +.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~--~~ 78 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANG--IK 78 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHH--HH
Confidence 3456677777777777666666666666555 78889999999999999999999999999999999987765431 11
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
.++.+.... . ... .+.-++.+.+.....+.......+.++++++++++|+.+....++..+||.++|.+.+
T Consensus 79 ~~~~~~~~~-----~--~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 79 LLGCLLMLF-----G--IHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHH-----H--HHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1 111 2222233444434444444445566788999999999999999999999999999998
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 547 RGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 547 ~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
.. +...+.+.+.+.+++.+....+
T Consensus 150 ~~-~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 150 PH-AEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 64 6666666655555444444333
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.10 E-value=3.7e-09 Score=111.99 Aligned_cols=178 Identities=11% Similarity=-0.004 Sum_probs=111.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
++.++...+..+..+.....+....| ++++ .|+++.+.+++.+...++..++.++.|++.||+|+|+.+..+. .+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~--~~~ 101 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGL--ILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHH--HHH
Confidence 34444444444444444444455555 4555 5999999999999999999999999999999999998655332 111
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
+++.+.... . ...........+. ++.+.+.............+..++++||+++|+.+....+++.+++.+.+.+.
T Consensus 102 ~~~~~~~~~--~-~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~ 178 (438)
T TIGR00712 102 AAVMLLMGF--V-PWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGM 178 (438)
T ss_pred HHHHHHHhc--c-ccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 111111111 0 0001222222222 22232222222333333455577889999999999999999999998887655
Q ss_pred h-cCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 546 Q-RGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 546 ~-~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+ ..+|+..|++.+++.++..++.+++
T Consensus 179 ~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 179 AWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4 4789999999888877765544443
No 168
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.09 E-value=5.8e-09 Score=108.95 Aligned_cols=179 Identities=12% Similarity=0.055 Sum_probs=111.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
++.++...+..++.+...+.+....+.+-++.+|++..+.+++.++..++..+.++..|++.||+|.|++...+.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~----- 107 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFST----- 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH-----
Confidence 456666666666666666666666666666469999999999999999999999999999999999997654332
Q ss_pred HHHHHHHHHHHHHhh---ccchhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLS---HVRTPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATG 542 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g 542 (579)
.+........... ..+++... ++.++.+.+ .............-.|++++|+++|+....+++|..+++++..
T Consensus 108 --ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 108 --AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred --HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1111111111111 11233333 333333333 3344444444555577789999999997777777766665554
Q ss_pred HHH-----h-------------cCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 543 YIL-----Q-------------RGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 543 ~l~-----~-------------~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.+. + ..+++.+.++..++.++..++.++..+
T Consensus 185 ~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 185 LVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 433 2 123666666777666666655555433
No 169
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.09 E-value=2.3e-09 Score=111.10 Aligned_cols=159 Identities=18% Similarity=0.173 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008070 404 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 483 (579)
Q Consensus 404 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (579)
...+....|. +.+.+|++..+.+++.+...++..++.++.|++.||+|+|+.+..+. .+..++..... . ..
T Consensus 10 ~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~--~~~~~~~~~~~-----~-~~ 80 (399)
T TIGR00893 10 RANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFI--VIWGVFTGLQA-----F-AG 80 (399)
T ss_pred HHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHH--HHHHHHHHHHH-----H-Hc
Confidence 3444445555 45558999999999999999999999999999999999998765432 11111111111 1 11
Q ss_pred chhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 008070 484 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 563 (579)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l 563 (579)
+.+.+.+...+.+.+.....+.......+..++++|++++++.+....+|..+++.+.+.+.+..+|+..|.+.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 22233333333344433333333334455567789999999999999999999999999999999999999988887776
Q ss_pred HHHHHHHh
Q 008070 564 GTLVWNLF 571 (579)
Q Consensus 564 ~~~~~~~~ 571 (579)
..++..+.
T Consensus 161 ~~~~~~~~ 168 (399)
T TIGR00893 161 WGVLWLKF 168 (399)
T ss_pred HHHHhhhe
Confidence 66655444
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.08 E-value=8.7e-09 Score=107.99 Aligned_cols=158 Identities=11% Similarity=0.045 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008070 404 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 483 (579)
Q Consensus 404 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (579)
...+...+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|+|+.+..+. ............ .
T Consensus 29 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~-------~~~~~~~~~~~~--~ 98 (406)
T PRK15402 29 NDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV-------AFFILTCLAILL--A 98 (406)
T ss_pred hhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH-------HHHHHHHHHHHH--H
Confidence 33344455655555 8999999999999999999999999999999999997654321 111111111111 1
Q ss_pred chhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 008070 484 RTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYI 562 (579)
Q Consensus 484 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~ 562 (579)
...+...+. ++.+.+.............+..++++++++.++......++..++|.+.+.+.+..+|+..|++.+++.+
T Consensus 99 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~ 178 (406)
T PRK15402 99 QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAA 178 (406)
T ss_pred ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHH
Confidence 223323222 2223222222223333344556778888999998888889999999999999999999999998888877
Q ss_pred HHHHHHHHh
Q 008070 563 IGTLVWNLF 571 (579)
Q Consensus 563 l~~~~~~~~ 571 (579)
++.+.....
T Consensus 179 ~~~~~~~~~ 187 (406)
T PRK15402 179 LSFFGLWRA 187 (406)
T ss_pred HHHHHHHHh
Confidence 766654443
No 171
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.08 E-value=5.6e-09 Score=111.58 Aligned_cols=185 Identities=13% Similarity=0.110 Sum_probs=136.6
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHH
Q 008070 384 ILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRK 463 (579)
Q Consensus 384 l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~ 463 (579)
.+++|.|..+.+..++.+++......-++.++.+ ..-++...+++.+...+..++..+++|.++||+.||++++..-
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~-- 82 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ-- 82 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH--
Confidence 4788999999999999999888888888877776 4668999999999999999999999999999999998776432
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhh-ccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008070 464 IMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSN-HQDIGPRYAGVLLGLSNTAGVLAGVFGTAATG 542 (579)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g 542 (579)
.+..+.. ..+.++.......++.++++.++.+....+..+...+. .+.+++++...++++.++..++...+||.++|
T Consensus 83 ~~~~~~~--~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 83 LLRALVA--LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHH--HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 1111111 11111112222334444444444444455555555554 45577888999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 543 YILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 543 ~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.++...|...+|.+.++..++.++++..+++
T Consensus 161 ~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 161 ILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999988887777666555544
No 172
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.08 E-value=9.1e-09 Score=107.35 Aligned_cols=169 Identities=8% Similarity=0.018 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHH
Q 008070 393 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLG 472 (579)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 472 (579)
..+..++...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+. ....
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~-------~~~~ 84 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGM-------SIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH-------HHHH
Confidence 3333334344444444556777666 8999999999999999999999999999999999997654322 1111
Q ss_pred HHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 008070 473 PAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWD 551 (579)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~ 551 (579)
........ .+..+...+. ++.+.+.............+..++++++.++++.+....++..++|.+.+.+.+..||+
T Consensus 85 ~~~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 162 (394)
T PRK11652 85 LGTLVALF--AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWR 162 (394)
T ss_pred HHHHHHHH--HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 11111111 1222222222 22232222222222222233345678899999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 008070 552 DVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 552 ~~~~~~~~~~~l~~~~~~~~ 571 (579)
..|.+.+++.++..++..+.
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~ 182 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARW 182 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99998877666554444333
No 173
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.08 E-value=5.2e-08 Score=98.95 Aligned_cols=320 Identities=13% Similarity=0.101 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhc
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 288 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 288 (579)
..+...-.+..++..+++.++.+|+..+.=+.+..+++.++.++.++++ +.+.-+++-++.+++.|.......++..
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 3444444555666667788889998877667777788889999999998 8888889999999999988888888644
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCc--chHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcH-----H
Q 008070 289 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA-----E 361 (579)
Q Consensus 289 ~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gw--r~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~-----~ 361 (579)
.+++ ...+-+..+.+.++++|+..-..+.. .++ |.++++...+.++..+..++.++.++.+.+.... .
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~ 213 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEA 213 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcc
Confidence 5543 35788888999999999988776666 554 7778777777666555555555543322111100 0
Q ss_pred HHhhhhcCC--cccccccchhHHHHh-hchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCC-hhhhhHHhHHHHHH
Q 008070 362 EKRHILGGS--ISKEAVSVIPWKLIL-SKAPVWALIISHFCHNWGTFILLT-WMPTYYNQVLKFN-LTESGLFCVLPWLT 436 (579)
Q Consensus 362 ~~~~~~~~~--~~~~~~~~~~~~~l~-~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~~~~g~s-~~~~g~~~~~~~~~ 436 (579)
+......+. .+.+......+++-+ +-+.++..++-.+..++..|.++. ..|...-..-..+ ..+..++...+.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~G 293 (402)
T PF02487_consen 214 EDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLG 293 (402)
T ss_pred cccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHH
Confidence 000000000 000111112222211 223333355555556666665544 3444332211222 34455566666666
Q ss_pred HHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHhhhhhhhhhhhhhhccccC
Q 008070 437 MAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR-TPAMAVLCMACSQGSDAFSQSGLYSNHQDIG 515 (579)
Q Consensus 437 ~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (579)
..+++--...+ |+ |++.+... +..+-++... .-......+ .+..+++++..|...+.........+.++.+
T Consensus 294 VFISRSS~~~~--ri--r~lwils~---LQ~~nl~~~~-l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~ 365 (402)
T PF02487_consen 294 VFISRSSLPFF--RI--RRLWILSL---LQVINLVFLL-LQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVP 365 (402)
T ss_pred Hhhhhcceeee--eh--hhHHHHHH---HHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCC
Confidence 66665432221 22 33222211 1111111111 111111222 3333445555555555666666667788889
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 516 PRYAGVLLGLSNTAGVLAGVFGTAATGYI 544 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~lg~~ig~~l~g~l 544 (579)
+++|-.++|.....-.+|..++..++-.+
T Consensus 366 ~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 366 PEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999888888887777665443
No 174
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.08 E-value=6.3e-09 Score=106.02 Aligned_cols=169 Identities=15% Similarity=0.191 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHH
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 471 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 471 (579)
.+.+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+. ....++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~--~~~~~~~~ 79 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGL--LLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHH--HHHHHHHH
Confidence 34556666777777788888988877 6999999999999999999999999999999999998654322 11111111
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 472 GPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
. ... .+..+...+...+.+.......+.... ..+..++++|++++++.+....+|..++|.+.+.+.+..+|
T Consensus 80 ~-----~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (352)
T cd06174 80 L-----LAF--ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW 152 (352)
T ss_pred H-----HHH--hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 1 111 123333333333333333333333333 44556678999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 008070 551 DDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 551 ~~~~~~~~~~~~l~~~~~~~ 570 (579)
+..+.+.+++.+++.++..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 153 RWLFLILAILGLLLALLLLF 172 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999888877776665443
No 175
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.08 E-value=8.1e-09 Score=107.23 Aligned_cols=152 Identities=13% Similarity=-0.014 Sum_probs=108.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
++.++.+++..++..........++|.|..+ +|.+..+.|++.+...++..++.++.|++.||+|+|+.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~----- 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS----- 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-----
Confidence 4557778888888888888889999999987 7999999999999999999999999999999999997554321
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHH-HhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLCMAC-SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
.+...+..... ..++.+...+..++ +.+.....+.......+..++++|++++|.......+|..+|+.+.+.+.
T Consensus 79 --~~~~~~~~~~~--~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 79 --LIFAAGCAGLG--LMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred --HHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 11111111111 12233333333333 33332332333333445567788999999999999999999999999987
Q ss_pred hcC
Q 008070 546 QRG 548 (579)
Q Consensus 546 ~~~ 548 (579)
+..
T Consensus 155 ~~~ 157 (381)
T PRK03633 155 TEL 157 (381)
T ss_pred ccc
Confidence 763
No 176
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.07 E-value=4.5e-09 Score=108.84 Aligned_cols=159 Identities=13% Similarity=0.092 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008070 404 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV 483 (579)
Q Consensus 404 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (579)
...+...+|.+.++ +|+++.+.+++.+...++..++.++.|+++||+|||+.+..+. ....++ ...... ..
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~--~~~~i~-----~~~~~~-~~ 77 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGT--LVFALA-----AVACAL-AQ 77 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHH--HHHHHH-----HHHHHH-Hc
Confidence 34455677888877 8999999999999999999999999999999999987544321 111111 111111 11
Q ss_pred chhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 008070 484 RTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 563 (579)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l 563 (579)
+.....+..++.+.+.............+..++++|++++++.+....+|..++|.+.+.+.+..+|+..|++.+++.++
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAIL 157 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 22222222333333333333333333445567788999999999999999999999999999999999999988887777
Q ss_pred HHHHHHHh
Q 008070 564 GTLVWNLF 571 (579)
Q Consensus 564 ~~~~~~~~ 571 (579)
..++....
T Consensus 158 ~~~~~~~~ 165 (377)
T PRK11102 158 AAALVFFF 165 (377)
T ss_pred HHHHHHHh
Confidence 66555443
No 177
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.07 E-value=8.6e-09 Score=107.50 Aligned_cols=156 Identities=14% Similarity=0.178 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008070 405 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 484 (579)
Q Consensus 405 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (579)
......+|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+|+.+..+. .+.. +........+
T Consensus 26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~-------~l~~--~~~~~~~~a~ 95 (393)
T PRK09705 26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISL-------LLIA--VGALMRELYP 95 (393)
T ss_pred hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHH-------HHHH--HHHHHHHHCc
Confidence 4455677777766 8999999999999999999999999999999999997654332 1111 1111122223
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHH
Q 008070 485 TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYII 563 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~-g~~~~~~~~~~~~~l 563 (579)
+++..++.-++.+...+...+.......+..+++|+.++|+......+|..+++.+.+++.++. +|+..+.+.++..++
T Consensus 96 ~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 96 QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3333333333333333333333334444445688999999999999999999999999999884 899888776655554
Q ss_pred HHHHHHH
Q 008070 564 GTLVWNL 570 (579)
Q Consensus 564 ~~~~~~~ 570 (579)
..+.++.
T Consensus 176 ~~~~~~~ 182 (393)
T PRK09705 176 ALFAWWW 182 (393)
T ss_pred HHHHHHH
Confidence 4443333
No 178
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.07 E-value=1.4e-08 Score=108.13 Aligned_cols=157 Identities=12% Similarity=0.021 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 008070 408 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA 487 (579)
Q Consensus 408 ~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (579)
....| ++.+. |++..+.++..+...++..++.++.|+++||+|+|+++..+. .+..++.+...+ . .......+
T Consensus 49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~--~~~~i~~~~~~~--~-~~~~~~~~ 121 (452)
T PRK11273 49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL--ILAAAVMLFMGF--V-PWATSSIA 121 (452)
T ss_pred HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHH--HHHHHHHHHHHh--h-hcccccHH
Confidence 34455 55665 999999999999999999999999999999999998655432 111111111111 0 00111222
Q ss_pred HHHH-HHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 008070 488 MAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF-GTAATGYILQRGSWDDVFKVAVVLYIIGT 565 (579)
Q Consensus 488 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i-g~~l~g~l~~~~g~~~~~~~~~~~~~l~~ 565 (579)
...+ .++.+.+.....+.......+..++++|++++|+.+....+|+.+ +|.+...+....+|+..|++.+++.++..
T Consensus 122 ~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 122 VMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVA 201 (452)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 2222 233333332222333334455567899999999999999988754 45443334344589999998887766655
Q ss_pred HHHHHh
Q 008070 566 LVWNLF 571 (579)
Q Consensus 566 ~~~~~~ 571 (579)
++.+++
T Consensus 202 ~l~~~~ 207 (452)
T PRK11273 202 LFAFAM 207 (452)
T ss_pred HHHHHH
Confidence 444443
No 179
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.05 E-value=1.5e-08 Score=106.41 Aligned_cols=153 Identities=12% Similarity=0.115 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 008070 407 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 486 (579)
Q Consensus 407 ~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (579)
...-+|...+ .++.+..+.++..+++.++..++.++.|+++||+|||+.+..+. .+..+ +..... ..++.
T Consensus 35 ~~p~l~~i~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~--~~~~~-----~~~~~~--~a~~~ 104 (413)
T PRK15403 35 IQPGIINVVR-DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGA--LIFTL-----ACAATL--FTTSM 104 (413)
T ss_pred hccCHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHH--HHHHH-----HHHHHH--HcCCH
Confidence 3334455444 48999999999999999999999999999999999997654332 11111 111111 12233
Q ss_pred HHHHHH-HHHHhhhhhhhhhhhhhhc-cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 008070 487 AMAVLC-MACSQGSDAFSQSGLYSNH-QDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 487 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~ 564 (579)
+..++. ++.+.+.. ...+...... +..+++++++++++.+....++..+||.+++.+.+..||+..|++.+++.+++
T Consensus 105 ~~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 105 TQFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 333322 33333322 2222223333 34566788999999999999999999999999999899999999988887777
Q ss_pred HHHHHH
Q 008070 565 TLVWNL 570 (579)
Q Consensus 565 ~~~~~~ 570 (579)
.++.++
T Consensus 184 ~~~~~~ 189 (413)
T PRK15403 184 FVGLLL 189 (413)
T ss_pred HHHHHH
Confidence 665444
No 180
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.05 E-value=1.5e-08 Score=106.97 Aligned_cols=162 Identities=10% Similarity=0.066 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 469 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 469 (579)
+....+..+.............|.+.+ .+|.++.+.++..+...++..++.++.|+++||+|+|+.+..+. ....++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~--~~~~~~ 96 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKA-DLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSI--VAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH--HHHHHH
Confidence 444445555555555555555565544 48999999999999999999999999999999999997654332 111111
Q ss_pred HHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008070 470 FLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG 548 (579)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~ 548 (579)
.++ .......+...+. ++.+.+.............+..++++|+++.++......+|.++++.+.+.+.+..
T Consensus 97 ~~~-------~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 97 TGL-------SGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHH-------HHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 111 1111223333332 33333333333334444556677889999999999999999999999999999989
Q ss_pred ChHHHHHHHHHHH
Q 008070 549 SWDDVFKVAVVLY 561 (579)
Q Consensus 549 g~~~~~~~~~~~~ 561 (579)
+|+..|++..+..
T Consensus 170 ~w~~~f~i~~~~~ 182 (426)
T PRK12307 170 GWRAAFFVGLLPV 182 (426)
T ss_pred CHHHHHHHHHHHH
Confidence 9999998755433
No 181
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.04 E-value=1.1e-08 Score=106.23 Aligned_cols=164 Identities=10% Similarity=-0.011 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHH
Q 008070 391 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 470 (579)
Q Consensus 391 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 470 (579)
+.+.+.+++.+.+......++|.|+++ +|++..++|++.+...+...++.++.+.++||++|+.... .....+.
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~-----~~~~~~~ 80 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIAL-----RLLALAS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH-----HHHHHHH
Confidence 345566777777777888899999988 7999999999999999999999999999999998753211 1111111
Q ss_pred HHHHHHHHHhhccchhHHHHHHHH-HHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 471 LGPAFFLTQLSHVRTPAMAVLCMA-CSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
.+....+ ....+..+..++... .+.+... ..+.......+ .++++++.+|.......+|.+++|++.|.+.+..|
T Consensus 81 ~l~~~~~--~~~~~~~~~l~~~~~l~~~~~~~-~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g 156 (382)
T TIGR00902 81 AIFAAAF--SAGAHNAWLLFIAIGLFALFFSA-GMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD 156 (382)
T ss_pred HHHHHHH--HHhhhhHHHHHHHHHHHHHHHcc-chhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111111 112233343333333 3333322 33333333333 35778999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q 008070 550 WDDVFKVAVVLYIIG 564 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~ 564 (579)
|+..|.+..++.++.
T Consensus 157 ~~~~f~~~~~~~~~~ 171 (382)
T TIGR00902 157 EQNILAILTAGLAFM 171 (382)
T ss_pred hhHHHHHHHHHHHHH
Confidence 999988876554333
No 182
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.03 E-value=1.6e-08 Score=108.98 Aligned_cols=165 Identities=8% Similarity=0.077 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.+..+.+..++..+........+|.+..+ +|.++.+.+++.+...++.+++.++.|++.||+|+|+.+..+. .+..+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~ 97 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGE-FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISI--VLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHH
Confidence 34455555555556666666666766555 8999999999999999999999999999999999997544321 11111
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008070 469 GFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG 548 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~ 548 (579)
+.+. ... ..+...+.+..++.+.+.............+..++++|+.++++......+|..+++.+.+.+.+..
T Consensus 98 ~~~~-----~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 98 GTLA-----CGF-APGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHH-----HHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 1111 111 1122223333333333333333334444556677789999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHH
Q 008070 549 SWDDVFKVAVVLYI 562 (579)
Q Consensus 549 g~~~~~~~~~~~~~ 562 (579)
+|+..|.+..+..+
T Consensus 172 ~w~~~f~~~~~~~~ 185 (496)
T PRK03893 172 GWRALFFIGILPII 185 (496)
T ss_pred CHHHHHHHHHHHHH
Confidence 99999887544433
No 183
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.02 E-value=8.9e-09 Score=109.51 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 008070 407 LLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 486 (579)
Q Consensus 407 ~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (579)
+..++|.+..+ +|.+..+.+++.+...++..++.++.|+++||+++|+.+..+. .+..++ ..+... ....
T Consensus 38 ~~~~~~~i~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~--~~~~~~-----~~~~~~--~~~~ 107 (455)
T TIGR00892 38 VTVFFKELQQI-FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG--LLASLG-----MILASF--SSNV 107 (455)
T ss_pred hhhhHHHHHHH-hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH--HHHHHH-----HHHHHH--hhhH
Confidence 44566766665 8999999999999988888999999999999999997654322 111111 111111 1222
Q ss_pred HHHH-HH-HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 008070 487 AMAV-LC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 487 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~ 564 (579)
+... .. ++.+.+.....++.. ....+..+++|+++.|+.+....+|..++|++.+.+.+..||+..|++.+++.+++
T Consensus 108 ~~l~~~~~~l~G~~~~~~~~~~~-~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 108 IELYLTAGFITGLGLAFNFQPSL-TMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHC 186 (455)
T ss_pred HHHHHHHHHHHHhcchhhhhHHH-HHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 2222 11 222323222223333 23333346889999999999999999999999999999999999999999887766
Q ss_pred HHHHHHhh
Q 008070 565 TLVWNLFA 572 (579)
Q Consensus 565 ~~~~~~~~ 572 (579)
.++.+++.
T Consensus 187 ~v~~~~~~ 194 (455)
T TIGR00892 187 CVCGALMR 194 (455)
T ss_pred HHHHHHhC
Confidence 65554443
No 184
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.02 E-value=1.1e-08 Score=109.88 Aligned_cols=138 Identities=13% Similarity=0.104 Sum_probs=98.2
Q ss_pred HHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHH-HHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCc
Q 008070 216 FLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE 294 (579)
Q Consensus 216 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll-~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~ 294 (579)
.++..++.++.|+++||+|||++++++.++..++.+. .......+...+++.+++.|++.+........++.+++|++.
T Consensus 296 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~ 375 (490)
T PRK10642 296 MIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI 375 (490)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 3444455578999999999999988887654433332 222221156777888999998877777778888999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchHHHHhhHHHHHHHHHHHhhhcCCCCC
Q 008070 295 RSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSIWFALWLKKAYSSPKE 354 (579)
Q Consensus 295 r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-gwr~~f~i~~~~~li~~~l~~~~~~~~~~~ 354 (579)
|+.++++......++..++|.+.+++.+.. +|+.++++..+.+++.++..+ +.||+|+.
T Consensus 376 Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~ 435 (490)
T PRK10642 376 RYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANR 435 (490)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCC
Confidence 999999855556666788999999888754 477777766666555555444 44666653
No 185
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.02 E-value=3.2e-08 Score=103.68 Aligned_cols=173 Identities=9% Similarity=0.036 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 469 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 469 (579)
++.+++..+...+........+|.+. +.+|.+..+.|++.+...++..++.++.|++.||+|+|+.+..+. .+..++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~-~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~--~l~~~g 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQ-QAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL--FLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH--HHHHHH
Confidence 45556666666666666667777764 458999999999999999999999999999999999997654432 111111
Q ss_pred HHHHHHHHHHhhccchhHHHHH-HHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 008070 470 FLGPAFFLTQLSHVRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR- 547 (579)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~- 547 (579)
.+. ........+++..++ .++.+.+.............+..+++++++..++.+....+|..++|.+.+.+...
T Consensus 82 ~~l----~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 82 AFL----FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHH----HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 111 111111223333333 33333333333333333333445678899999999999999999999999988533
Q ss_pred -------------------------CChHHHHHHHHHHHHHHHHHHH
Q 008070 548 -------------------------GSWDDVFKVAVVLYIIGTLVWN 569 (579)
Q Consensus 548 -------------------------~g~~~~~~~~~~~~~l~~~~~~ 569 (579)
.+|+..|.+.+++.++..++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588889888877666554443
No 186
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=1.3e-08 Score=101.95 Aligned_cols=178 Identities=15% Similarity=0.135 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQS 467 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~ 467 (579)
+.++.-.++....+...+. ..-+...+.+.+|+++.|.+++.++..+.+.+.+++.|.+.||+|.|++.....
T Consensus 14 ~~L~~S~~af~v~F~VW~l-~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~------ 86 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTL-FSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSM------ 86 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHH------
Confidence 3444444444443333333 333344444669999999999999999999999999999999999997654321
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 468 IGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
+.+++..+.+......+..+..+++-.+.+..+......+.....-.||+++|.++|++. .+++|..+...+...+...
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~ 165 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH
Confidence 222222233222222332233333333333333334445555566688899999999988 9999999999999999999
Q ss_pred CC---hHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 548 GS---WDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 548 ~g---~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.| |+.+..+..+..++..++.++..+
T Consensus 166 ~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 166 FGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88 888888888887777666666543
No 187
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.01 E-value=1.5e-08 Score=105.40 Aligned_cols=163 Identities=10% Similarity=-0.053 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHH
Q 008070 396 SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAF 475 (579)
Q Consensus 396 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 475 (579)
.+++++.+...+..++|.|+++ +|.+..++|++.+...+...++.++.|.+.||++|+.... + .+..... ....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~---~-~~~~~~~-~~~~ 85 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPAL---R-LLALLTL-LFAV 85 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHH---H-HHHHHHH-HHHH
Confidence 3555666777888899999988 7999999999999999999999999999999999853211 0 1111111 1111
Q ss_pred HHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Q 008070 476 FLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFK 555 (579)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~ 555 (579)
. .....+..+...+...+.+.......+.......+. .++++++.|.......+|.++||+++|++.++.||+..|+
T Consensus 86 ~--~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~ 162 (382)
T PRK11128 86 A--FWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILW 162 (382)
T ss_pred H--HHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 1 111223334333333322222233333333333333 4557788888888899999999999999999999999998
Q ss_pred HHHHHHHHHHHH
Q 008070 556 VAVVLYIIGTLV 567 (579)
Q Consensus 556 ~~~~~~~l~~~~ 567 (579)
+.++..++..++
T Consensus 163 ~~~~~~~~~~~~ 174 (382)
T PRK11128 163 ILTAGVASMLLG 174 (382)
T ss_pred HHHHHHHHHHHH
Confidence 877655554443
No 188
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.00 E-value=3.4e-09 Score=109.42 Aligned_cols=164 Identities=15% Similarity=0.014 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHH
Q 008070 398 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFL 477 (579)
Q Consensus 398 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (579)
++.+.....+....|.+. +.+|++..+.+++.+...++..++.++.|+++||+|+|+.+..+. .+..++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~~~---- 77 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLV-EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGL--ILCAIVNLFF---- 77 (379)
T ss_pred hHHHHhHHhhhhhhHHHH-HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHH--HHHHHHHHHH----
Confidence 344455555666667554 448999999999999999999999999999999999998665432 1111111111
Q ss_pred HHhhccchhHHHHHHHHHHhhhhhhhhhhhh-hhccccCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCChHHHHH
Q 008070 478 TQLSHVRTPAMAVLCMACSQGSDAFSQSGLY-SNHQDIGPRYAGVLLGLSNTAGVLAGVFGT-AATGYILQRGSWDDVFK 555 (579)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~-~l~g~l~~~~g~~~~~~ 555 (579)
. .....+...+...+.+...+...+... ...+..++++|+++.|+.+....+|..+++ .+.+.+.+..+|+..|+
T Consensus 78 -~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 154 (379)
T TIGR00881 78 -G--FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFI 154 (379)
T ss_pred -H--HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHH
Confidence 1 112333333333333333333333333 445556778899999999999999999999 46667777789999998
Q ss_pred HHHHHHHHHHHHHHHh
Q 008070 556 VAVVLYIIGTLVWNLF 571 (579)
Q Consensus 556 ~~~~~~~l~~~~~~~~ 571 (579)
+.+++.++..++.++.
T Consensus 155 ~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 155 VPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHhee
Confidence 8887776655554444
No 189
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.00 E-value=9.2e-09 Score=109.91 Aligned_cols=161 Identities=16% Similarity=0.034 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccch
Q 008070 406 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT 485 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (579)
.+....|.+.++ +|++..+.|++.+...++..++.++.|+++||+|+|+++..+. .+.++.....+.. ......+
T Consensus 47 ~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~--~~~~~~~~~~~~~--~~~~~~~ 121 (467)
T PRK09556 47 NFKAAQNDMIST-YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLL--ILSAICMLGFGAS--LGSGSVS 121 (467)
T ss_pred ChhhhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHH--HHHHHHHHHHHHH--Hhcccch
Confidence 344556766655 8999999999999999999999999999999999998765432 1112222221211 1112233
Q ss_pred hHHHHHHHHHHhhh-hhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ChHHHHHHHHHHH
Q 008070 486 PAMAVLCMACSQGS-DAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG---SWDDVFKVAVVLY 561 (579)
Q Consensus 486 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~---g~~~~~~~~~~~~ 561 (579)
.+..+++-++.+.. ....+.......+.+++++||+++|+......+|.++++.+..++.+.. +|+..|.+.+++.
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~ 201 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA 201 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence 33333333333333 3333333344555577889999999999999999999999988777652 5888888877766
Q ss_pred HHHHHHHHHh
Q 008070 562 IIGTLVWNLF 571 (579)
Q Consensus 562 ~l~~~~~~~~ 571 (579)
++..++.+++
T Consensus 202 ~~~~i~~~~~ 211 (467)
T PRK09556 202 LIIGFIGLRY 211 (467)
T ss_pred HHHHHHHHHh
Confidence 6555544444
No 190
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=1.7e-08 Score=119.87 Aligned_cols=183 Identities=13% Similarity=0.073 Sum_probs=112.8
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhCC-ChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcch
Q 008070 384 ILSKAPVWALIISHFCHNWGTFILLTWMPTY----YNQVLKF-NLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 458 (579)
Q Consensus 384 l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~----l~~~~g~-s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~ 458 (579)
+++++.++.+++..++..++.+.....++.+ +.+..+. +....++..++..+..++..++.|+++||+++|+++.
T Consensus 7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~ 86 (1140)
T PRK06814 7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAK 86 (1140)
T ss_pred hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHH
Confidence 5677777776666666665544332222222 2221111 1245677777888899999999999999999997543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHH
Q 008070 459 TAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGT 538 (579)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~ 538 (579)
... ...++.....+......+.+.+++..++.+.+.....+.....+.+.+++++++.++|+.++...+|.++||
T Consensus 87 ~~~-----~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp 161 (1140)
T PRK06814 87 ILK-----FAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGT 161 (1140)
T ss_pred HHH-----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHH
Confidence 211 111111111111111123333333334444444444444455556667889999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 539 AATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 539 ~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
.++|++.+..+|...|.+.+++.+++.++.+.+
T Consensus 162 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 162 IIGGLATISGNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999988855555555555544444
No 191
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.98 E-value=3.8e-07 Score=94.29 Aligned_cols=317 Identities=14% Similarity=0.081 Sum_probs=188.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccC
Q 008070 212 CFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP 291 (579)
Q Consensus 212 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~ 291 (579)
.++.+....+..++.+.+.|+.|.|+.++++...+.+..+..-+. |-+.+++...+.|+|.+..+..-..++++..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 455566666677899999999999999999999999888877665 46778999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc--------Ccc-hH-------H---HHhhHHHHHHHHHHHhhhcCCC
Q 008070 292 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--------GWP-SV-------F---YSFGSLGSIWFALWLKKAYSSP 352 (579)
Q Consensus 292 ~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~--------gwr-~~-------f---~i~~~~~li~~~l~~~~~~~~~ 352 (579)
++.+.+..++.......+.++|.++...+...- +-+ +. + .+.+++..+..+....... .|
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~-~p 211 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF-LP 211 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee-cC
Confidence 999999999999999988888877665443211 111 11 1 1111111111111111111 11
Q ss_pred CCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCCh-hhhhHH
Q 008070 353 KEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFNL-TESGLF 429 (579)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~--~g~s~-~~~g~~ 429 (579)
.+......+..+ ...........++++++++..+....+..++....+....|..+.-. .+.+. ...++.
T Consensus 212 ~~~~~~~~~~~~-------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~ 284 (461)
T KOG3098|consen 212 SKDVVNCKSSSE-------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIY 284 (461)
T ss_pred ccchhhhhhhcc-------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHH
Confidence 111000000000 00000112233456788887777777766665555555666554332 23332 334555
Q ss_pred hHHHHHHHHHHHHHHHHHhhhh---hccCcchHHHHHHHHHHHHHHHHHHHHHhhcc--------------chhHHHHHH
Q 008070 430 CVLPWLTMAVFANMGGWIADTL---VSKGLSITAVRKIMQSIGFLGPAFFLTQLSHV--------------RTPAMAVLC 492 (579)
Q Consensus 430 ~~~~~~~~~ig~~~~g~l~dr~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 492 (579)
....+++.+++.+..+.+.+|. |++.....+. ++...+.+ +..+..+.. +......++
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~--~~~~~~~~---li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii 359 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGI--IIHLIGFL---LIHLSFPNDAPLRPTDSPPLLFTPSYYLALII 359 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHH--HHHHHHHH---HHhccccccCCCCCCcccccccccchhHHHHH
Confidence 5566677777777777777665 4444333221 11111111 111111100 123455566
Q ss_pred HHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 493 MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYI 544 (579)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l 544 (579)
.++.+..........+.....+.|+++.++.++.-+-..++..++-......
T Consensus 360 ~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 360 GFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 6666666777777777777777799999999888888877777666555443
No 192
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.96 E-value=6.4e-09 Score=110.93 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=104.3
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHh---hhcc------CHHHHHHHHHHHHhhhhchhhHH
Q 008070 212 CFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---AARI------GLPFLLIMRAFMGIGEGVAMPAM 282 (579)
Q Consensus 212 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~---a~~~------~~~~ll~~r~l~Gig~g~~~~~~ 282 (579)
.....++..++.+++|+++||+|||+.+.++.++.+++.++.++ .... +...+....++.+.......+..
T Consensus 325 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (481)
T TIGR00879 325 SIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVP 404 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCee
Confidence 33444555667789999999999999999998888888777662 1110 12222223333332222334666
Q ss_pred HHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCC
Q 008070 283 NNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSP 352 (579)
Q Consensus 283 ~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~ 352 (579)
..++.|.+|+++|++++++......+|.+++|.+.+.+.+..+|++.|++.++++++.+++.+++.++.+
T Consensus 405 ~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 405 WVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 6778999999999999999999999999999999999999899999999998888887777766655443
No 193
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.94 E-value=6.6e-08 Score=99.57 Aligned_cols=158 Identities=11% Similarity=0.001 Sum_probs=106.3
Q ss_pred HHHHHHHHHHhhCCChhh-hhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 008070 408 LTWMPTYYNQVLKFNLTE-SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP 486 (579)
Q Consensus 408 ~~~~p~~l~~~~g~s~~~-~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (579)
..+...++.+.+|++..+ .|.+...+..+..+..+++|+++||+|.|+++..+. +...+...........
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~---------l~Wsl~t~L~~fa~Sl 115 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQA---------LSFVCVWLLLLLGTSV 115 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH---------HHHHHHHHHHHHHHHH
Confidence 344555666679999999 999999999999999999999999999997544322 1111111111122223
Q ss_pred HHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH---HHHHHHHHH
Q 008070 487 AMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDV---FKVAVVLYI 562 (579)
Q Consensus 487 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~---~~~~~~~~~ 562 (579)
..+ +.=+++|.+-+... .....+..-+|+++|+++.|+.+....+|.++++++++++ ...||+.. .++..+...
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~ 193 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHH
Confidence 333 33334444443333 4444556668899999999999999999999999999994 45566544 445555556
Q ss_pred HHHHHHHHhhcCcc
Q 008070 563 IGTLVWNLFATGER 576 (579)
Q Consensus 563 l~~~~~~~~~~~~~ 576 (579)
+++++.+++.+.+|
T Consensus 194 ~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 194 FSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHhCCCCch
Confidence 66666666654433
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.92 E-value=9.6e-08 Score=99.98 Aligned_cols=169 Identities=9% Similarity=0.021 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-----hccCcchHHHHHHHHHH
Q 008070 394 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-----VSKGLSITAVRKIMQSI 468 (579)
Q Consensus 394 ~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~ 468 (579)
...++...........-+|.|+++ .|++.+++|++...... .+..+++|+++||+ |+||... ..+.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l------~~~~ 75 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWL------LLTQ 75 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHH------HHHH
Confidence 344555666667777889999999 59999999998665554 57889999999999 7775322 1111
Q ss_pred HHHHHHHHH-HHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 469 GFLGPAFFL-TQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 469 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
......... .........+.+..+..+.........+.... ..+..++++|+++.++......+|..+++.+.+.+.+
T Consensus 76 ~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 76 VGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 111111111 11112222333333322222333333333333 4455677889999999999999999999999999998
Q ss_pred c-CChHHHHHHHHHHHHHHHHHHHHh
Q 008070 547 R-GSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 547 ~-~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
. .||+..|++.+++.++..+.....
T Consensus 156 ~~~gw~~~f~i~a~~~l~~~l~~~~~ 181 (402)
T PRK11902 156 RVLGWGNTYLLMAGLMLAGALTTLWA 181 (402)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 6 599999999888777665544433
No 195
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.92 E-value=1.3e-07 Score=101.50 Aligned_cols=179 Identities=12% Similarity=0.019 Sum_probs=117.5
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-----hccCcchH
Q 008070 385 LSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-----VSKGLSIT 459 (579)
Q Consensus 385 ~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-----g~~~~~~~ 459 (579)
.++++.+.+++..+............+|.++++ .|.+..+++.+.. .... .++.+++|.++||+ |||+..+.
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll 85 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL-VGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLL 85 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHcccccCCCCchHHHH
Confidence 456667777777777777888888889999988 5999999998632 2332 26789999999999 88874321
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHH
Q 008070 460 AVRKIMQSIGFLGPAFFLTQLSHVRTPAMAV-LCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGT 538 (579)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~ 538 (579)
...+........+.........+... .....+.+.............+.+++++|+++.++......+|..+++
T Consensus 86 -----~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~ 160 (491)
T PRK11010 86 -----ATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG 160 (491)
T ss_pred -----HHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111111222333333 333333333322233333344556779999999999999999999999
Q ss_pred HHHHHHHh-cCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 539 AATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 539 ~l~g~l~~-~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
.+.+++.+ ..||+..|++.+++.++..+..+..
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~ 194 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIATLLA 194 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999 4799999999888877776655443
No 196
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.92 E-value=2.2e-08 Score=107.32 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=100.6
Q ss_pred HHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCH--HHHHHHHHHHHhhhhc-hhhHHHHHHhcccCcC
Q 008070 217 LLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGL--PFLLIMRAFMGIGEGV-AMPAMNNMLSKWIPVS 293 (579)
Q Consensus 217 ~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~--~~ll~~r~l~Gig~g~-~~~~~~~~i~~~~~~~ 293 (579)
+...++.++.|+++||+|||++++.+.++.+++.++++.....+. ...+...++.+++.+. ..+....+++|.+|++
T Consensus 317 ~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 396 (479)
T PRK10077 317 VINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA 396 (479)
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh
Confidence 344556689999999999999999999999988877665421111 1233334444444443 2367789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHh------hcccCcchHHHHhhHHHHHHHHHHHhhhcCCCC
Q 008070 294 ERSRSLAFVYSGMYLGSVTGLAVSPIL------IQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK 353 (579)
Q Consensus 294 ~r~~~~g~~~~~~~lG~~lgp~i~~~l------~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~ 353 (579)
+|+.++|+......+|.++++.+.+.+ .+.++|++.|++.++++++.+++.+++.||+++
T Consensus 397 ~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 397 IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 999999999999999998886665543 457899999999888877777766666665543
No 197
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.91 E-value=2e-05 Score=82.77 Aligned_cols=228 Identities=8% Similarity=0.025 Sum_probs=142.1
Q ss_pred hhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhh----hcc-------------------------CHHHHHHHHHHHHh
Q 008070 223 RIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA----ARI-------------------------GLPFLLIMRAFMGI 273 (579)
Q Consensus 223 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a----~~~-------------------------~~~~ll~~r~l~Gi 273 (579)
.++.+++++|++|++++-+....+.+..+++++. .+. +.|...+..+...+
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 4678999999999999888777777776666554 100 12333344455555
Q ss_pred hhhchhh-HHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cCcc----hHHHHhhHHHHHH
Q 008070 274 GEGVAMP-AMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--------FGWP----SVFYSFGSLGSIW 340 (579)
Q Consensus 274 g~g~~~~-~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~--------~gwr----~~f~i~~~~~li~ 340 (579)
-...... ...+++.|.++.+|-.|..++...+.++|.++++.+..++.+. -.|. +.+.+.++.+++.
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~ 220 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI 220 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHH
Confidence 5555555 7788999999999999999999999999999999998887631 1232 2333333333333
Q ss_pred HHHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008070 341 FALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLK 420 (579)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g 420 (579)
..+...+.+.. ..++.....++ ..+..+++......++.++++|.++.+++...++......+....-..+.+.+-
T Consensus 221 ~~~~~~l~~~~-~~~~~~~~~~~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p 296 (472)
T TIGR00769 221 ILLYWWVNRNV-LTDPRSYNPAL---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP 296 (472)
T ss_pred HHHHHHHHhcc-cCCccccchhh---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33333332222 11111001110 001111122234578889999999999888888888777777655566666443
Q ss_pred CChhh----hhHHhHHHHHHHHHHHHHHHHHhhhhhccC
Q 008070 421 FNLTE----SGLFCVLPWLTMAVFANMGGWIADTLVSKG 455 (579)
Q Consensus 421 ~s~~~----~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~ 455 (579)
++.+ .|.+....++..++..++.+++.+|+|-+.
T Consensus 297 -~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~ 334 (472)
T TIGR00769 297 -SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLT 334 (472)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3322 334444455555566667788989888764
No 198
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.87 E-value=3e-08 Score=86.34 Aligned_cols=136 Identities=15% Similarity=0.164 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008070 430 CVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS 509 (579)
Q Consensus 430 ~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (579)
.....++.+++.++.|++.||+++|+....+. ............ ..+.+.........+.+...........
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGL-------FIFVLSTAMFAL-SSNITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHH-------HHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34556788889999999999999997544321 111111111111 1222222222233333333333333333
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 510 NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 510 ~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
..+..++++++++.++.+....++..+++.+.+.+.+..+|+..+.+.+++.+++.+....+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4555677899999999999999999999999999999999999998888877777666655543
No 199
>PRK10133 L-fucose transporter; Provisional
Probab=98.86 E-value=2.4e-07 Score=97.94 Aligned_cols=150 Identities=12% Similarity=0.127 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.+..+.+.++...+........+|.+ ++.+|.++.+.+++.....++..++.++.|++.||+|+|+.+..+. .+..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~--~~~~~ 103 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL--FLYAL 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHH
Confidence 44556666677777777777788887 5569999999999999999999999999999999999997655432 11111
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 469 GFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP-RYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
+.++ .......++....++..++.+...+...+.......+.++ ++++..+++.+....+|..+++.+++.+.
T Consensus 104 ~~~l----~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 104 GAAL----FWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHH----HHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1001122333333333333333333333333333334455 44455789999999999999999887654
No 200
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.86 E-value=2.8e-08 Score=106.12 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=103.5
Q ss_pred hhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 008070 418 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQ 497 (579)
Q Consensus 418 ~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (579)
+++++..+.|++.+...++.+++.++.|++.||+|+|+.+..+. .+..++.++ ............++.-++.+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~--~~~~~~~~~----~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGM--FLSSVISIV----IPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHH--HHHHHHHHH----HHHHHHcCchHHHHHHHHHHH
Confidence 47899999999999999999999999999999999998654332 111111111 100111112223333333444
Q ss_pred hhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 498 GSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+.....+.......+..++++|++++|+.+....+|.++++++.+.+.+. .||+..|++.+++.++..++++.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence 43333344444455567779999999999999999999999999999998 5999999998888777666555543
No 201
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.85 E-value=5.6e-08 Score=99.85 Aligned_cols=149 Identities=19% Similarity=0.231 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccch
Q 008070 406 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT 485 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (579)
.+...+|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+|+.+..+. .....+.... ...+.
T Consensus 18 ~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~-------~~~~~~~~~~--~~~~~ 87 (355)
T TIGR00896 18 SVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGL-------LLIAAGILIR--SAPGT 87 (355)
T ss_pred cCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHH-------HHHHHHHHHH--HhccH
Confidence 345567777666 8999999999999999999999999999999999997654332 1111111111 11222
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHH
Q 008070 486 PAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG--SWDDVFKVAVVLYII 563 (579)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~--g~~~~~~~~~~~~~l 563 (579)
..+.+..+..+.+. +...........+..++++++++|+.+....+|..+++.+.+.+.+.. +|+..|.+.+++.++
T Consensus 88 ~~l~~~~~~~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 88 ALLFAGTALIGVGI-AIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHH-HHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 22222222223222 222222333344455678999999999999999999999999998764 388888776665544
Q ss_pred HH
Q 008070 564 GT 565 (579)
Q Consensus 564 ~~ 565 (579)
..
T Consensus 167 ~~ 168 (355)
T TIGR00896 167 AL 168 (355)
T ss_pred HH
Confidence 43
No 202
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.84 E-value=1.1e-07 Score=113.34 Aligned_cols=159 Identities=11% Similarity=0.068 Sum_probs=100.8
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCh--hhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHH
Q 008070 384 ILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNL--TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAV 461 (579)
Q Consensus 384 l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~--~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~ 461 (579)
.++++.++.+++..++..+........+..++...++.+. ...+++.++..++.+++.++.|+++||+|||+++..+.
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 4667777777777777666665555555555544455543 34677788888999999999999999999997655332
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008070 462 RKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT 541 (579)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~ 541 (579)
. +..+...+........+.+.+++..++.+.+.....+.......+.+++++|++++|+......+|.++|+.++
T Consensus 85 ~-----~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~ 159 (1146)
T PRK08633 85 L-----FEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALF 159 (1146)
T ss_pred H-----HHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHH
Confidence 1 11111111111111122222333333333333333333333455557789999999999999999999999999
Q ss_pred HHHHhc
Q 008070 542 GYILQR 547 (579)
Q Consensus 542 g~l~~~ 547 (579)
+++.+.
T Consensus 160 ~~l~~~ 165 (1146)
T PRK08633 160 SFLFES 165 (1146)
T ss_pred HHHHHh
Confidence 999876
No 203
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.83 E-value=4.7e-08 Score=99.87 Aligned_cols=181 Identities=19% Similarity=0.119 Sum_probs=112.2
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHH
Q 008070 385 LSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKI 464 (579)
Q Consensus 385 ~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~ 464 (579)
+|++.+|.+....+++++.+.....++|.++++..|++.+++|.++++..+..++.+++.|.+.||++.||-++...
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i--- 80 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI--- 80 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH---
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH---
Confidence 47888999999999999999999999999999888999999999999999999999999999999999887544211
Q ss_pred HHHHHHHH-HHHHHHH---hhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008070 465 MQSIGFLG-PAFFLTQ---LSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAA 540 (579)
Q Consensus 465 ~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l 540 (579)
.+..+. ..+.... ....+.+...++.............+..-++.+. -.+..+.-+|=....+++|.+++..+
T Consensus 81 --~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er-~sr~~~feYG~~R~wGSig~ai~s~~ 157 (412)
T PF01306_consen 81 --AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAER-VSRRNGFEYGRARMWGSIGFAIASLL 157 (412)
T ss_dssp --HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHH-HHHHHSS-HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH-HHHHhcCCcchHHHHhhHHHHHHHHH
Confidence 111111 1111111 1111111111111111111111122222223322 22445666777788899999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 541 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 541 ~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+|.+.+. +....|++..+..++..++.++.+
T Consensus 158 ~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 158 AGILFNI-NPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred hheeeee-CccHHHHHHHHHHHHHHHHHHHcC
Confidence 9999985 456667765555554444444443
No 204
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.83 E-value=2e-07 Score=98.10 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhh----hhhccCcchHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD----TLVSKGLSITAVRKIM 465 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~d----r~g~~~~~~~~~~~~~ 465 (579)
+..+....+...+++.....+++.|+++ +|.++...+++..+..+.+++..++.|+++| |+|||+.++...
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g---- 80 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAG---- 80 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHH----
Confidence 4445555566667777777888888876 8999999999999999999999999999999 599998654321
Q ss_pred HHHHHHHHHHHHHHhhcc------------chh---HHHHHHHHHHhhhhhhhhhhhhh-hccccCCCch--hHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQLSHV------------RTP---AMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYA--GVLLGLSN 527 (579)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~------------~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--g~~~g~~~ 527 (579)
.......+.++..... ... +..++.+.+..+..........+ ..+.+++++| +.++++.+
T Consensus 81 --~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~ 158 (477)
T TIGR01301 81 --AALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFS 158 (477)
T ss_pred --HHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHH
Confidence 1111111111111000 001 12222222222233333333334 4445666544 68999999
Q ss_pred HHHHHHHHHHHHHHHHH--Hhc-------------CChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 528 TAGVLAGVFGTAATGYI--LQR-------------GSWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 528 ~~~~lg~~ig~~l~g~l--~~~-------------~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
.+..+|+.+|+.+++.. .+. .+++..|++.+++.+++.++..+..+++
T Consensus 159 ~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 159 FFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 99999999999999875 221 1678889998888888877776665543
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.82 E-value=1.3e-07 Score=97.07 Aligned_cols=157 Identities=12% Similarity=0.057 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-----hccCcchHHHHHHHHHHHHHHHH-HHHHH
Q 008070 406 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-----VSKGLSITAVRKIMQSIGFLGPA-FFLTQ 479 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 479 (579)
.....+|.++++ .|++..+.+++... .+...+ .++.|.++||+ ||||.+.. ......... ..+..
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~------~~~~~~~~~~~~l~~ 76 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLV------LTQVLLLSLLLILSF 76 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHH------HHHHHHHHHHHHHHc
Confidence 345567888887 79999999998644 444444 88999999998 77764321 111111111 11111
Q ss_pred hhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------h
Q 008070 480 LSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS--------W 550 (579)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g--------~ 550 (579)
.......+.+.....+.........+.... ..+..++++|+.+.|+......+|..+++.+.+.+.+..| |
T Consensus 77 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 77 LVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 111122222222222222222323333333 4555778999999999999999999999999999998877 9
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 008070 551 DDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 551 ~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+..|++.+++.++..++.++.
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFL 177 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999888777766554443
No 206
>TIGR00898 2A0119 cation transport protein.
Probab=98.82 E-value=5.1e-08 Score=105.32 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=102.2
Q ss_pred hhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHH
Q 008070 222 DRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAF 301 (579)
Q Consensus 222 ~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~ 301 (579)
+.++.+++.||+|||+++.++.++.+++.++..+.++...+..++..++.+++.+...+....+..|.+|++.|+.++|+
T Consensus 371 ~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~ 450 (505)
T TIGR00898 371 AKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGV 450 (505)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhH
Confidence 44778899999999999999999999998888877632235556666777777777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCC
Q 008070 302 VYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSS 351 (579)
Q Consensus 302 ~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~ 351 (579)
......+|.+++|.+.+ + ...++..++++.+++.++..++.++ .||+
T Consensus 451 ~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 451 CSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred HHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 99999999999999998 4 3456777888888777776665554 3443
No 207
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.81 E-value=9.4e-08 Score=101.17 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=107.9
Q ss_pred HHHhhhhhhhhhhhhhcCCc--HHHHHHHHHHHHHHHHHHh--------hhccCHHHHHHHHHHHHhhhhchhhHHHHHH
Q 008070 217 LLCNMDRIVGGIWADKFGGK--PVLGFGVIWWSVATVLTPV--------AARIGLPFLLIMRAFMGIGEGVAMPAMNNML 286 (579)
Q Consensus 217 ~~~~l~~~~~G~l~Dr~Grr--~~l~~~~~~~~~~~ll~~~--------a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i 286 (579)
+...++.+++|++.||+|.| ++++++++++.+..+...+ .. +-+.+.+..++.|+..|..++..-++.
T Consensus 328 i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~--~~~~f~~~a~~~G~~~G~~qs~sRs~~ 405 (477)
T PF11700_consen 328 IVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK--SPWEFWVLAVLIGLFMGGIQSASRSLF 405 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc--cHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34455568999999999999 8888888877555554443 34 678899999999999999999999999
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC-cchHHHHhhHHHHHHHHHHHhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g-wr~~f~i~~~~~li~~~l~~~~ 347 (579)
+++.|+++.+..+|++....-....+||++.+.+.+..| -|+.+....++.++.+++.++.
T Consensus 406 ~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 406 SRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999998876 8888887777766666555443
No 208
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.78 E-value=3e-07 Score=92.72 Aligned_cols=319 Identities=17% Similarity=0.144 Sum_probs=164.7
Q ss_pred hhhhhhhhh----cCCcHH-HHHHHHHHHHHHHHHHhhhccCH---------------HHHHHHHHHHHhhhhchhhHHH
Q 008070 224 IVGGIWADK----FGGKPV-LGFGVIWWSVATVLTPVAARIGL---------------PFLLIMRAFMGIGEGVAMPAMN 283 (579)
Q Consensus 224 ~~~G~l~Dr----~Grr~~-l~~~~~~~~~~~ll~~~a~~~~~---------------~~ll~~r~l~Gig~g~~~~~~~ 283 (579)
|+.|..+|| |||||. +..+.+...++.++.+++.++.. ..+++.--+.=++.-....++-
T Consensus 85 P~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r 164 (498)
T KOG0637|consen 85 PLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR 164 (498)
T ss_pred ccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH
Confidence 888999995 788766 55556666777777777652211 1223333344455557778889
Q ss_pred HHHhcccCcCchhH-HHHHHHHHHHHHHHHHHHHHHHhhcccCcchH--HHHhhHHHHHHHHH------HH-hhhcCC--
Q 008070 284 NMLSKWIPVSERSR-SLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV--FYSFGSLGSIWFAL------WL-KKAYSS-- 351 (579)
Q Consensus 284 ~~i~~~~~~~~r~~-~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~--f~i~~~~~li~~~l------~~-~~~~~~-- 351 (579)
+++.|...++++.+ +++.+..+.++|.++|..+++++ +|+-. |.....+.+.+..+ .. +...++
T Consensus 165 a~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~ 240 (498)
T KOG0637|consen 165 ALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSE 240 (498)
T ss_pred HHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheeccc
Confidence 99999998776666 99999999999999999888743 33322 22111111111111 00 000000
Q ss_pred ----CCCChhhcHHHHhhhhcCCcccccccchhHHHH-hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChhh
Q 008070 352 ----PKEDPELRAEEKRHILGGSISKEAVSVIPWKLI-LSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLTE 425 (579)
Q Consensus 352 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~~ 425 (579)
+++++...+.... +....+.+.....+..+ ...+.++.+++...+.+.+.+.+..|...++.+ +++-++..
T Consensus 241 ~l~~~~~~~~s~~~~~~---~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a 317 (498)
T KOG0637|consen 241 SLWYPQEKPLSPKGTTA---RSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKA 317 (498)
T ss_pred ccccccccCCCCCcccc---cccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCC
Confidence 0011000000000 00000000000011112 235678889999999999988888888777644 34433321
Q ss_pred ----------------hhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh-c------
Q 008070 426 ----------------SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-H------ 482 (579)
Q Consensus 426 ----------------~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 482 (579)
-.+-+.+..+...+.+....++.+|+|.|+.+..+.....+..++.+......... +
T Consensus 318 ~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~ 397 (498)
T KOG0637|consen 318 DENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGI 397 (498)
T ss_pred CcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcce
Confidence 12334566677777888899999999966655544322222222222111110000 0
Q ss_pred -----cchhHHHHHHHHHHhhhhhhhhhhhhhhcc-ccCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008070 483 -----VRTPAMAVLCMACSQGSDAFSQSGLYSNHQ-DIGP--RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS 549 (579)
Q Consensus 483 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g 549 (579)
...++.++..+.....-....+...+.... +..+ ..+|...|+.+....+..++.....|.+.+..|
T Consensus 398 ~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 398 LSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred eecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 000111111111111111111111111111 1112 334778888888888888888888888888744
No 209
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.78 E-value=4e-07 Score=94.88 Aligned_cols=179 Identities=13% Similarity=0.086 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHH--hHHHHHHHHHHHHHH-HHHhhhhhccCcchHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF--CVLPWLTMAVFANMG-GWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~--~~~~~~~~~ig~~~~-g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
+..+...++.....+.....++|.|+++ .|.+..+.|++ .+...+...+..++. ++..||+|+|+..+... ..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~---~~ 78 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM---QC 78 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH---HH
Confidence 3445566677777778888899999998 59999999997 355677777777766 55788999887643221 00
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
........+..... ......+.........+......+.... ..+..+++.++...+.......+|..+++...+++.
T Consensus 79 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~ 157 (390)
T TIGR02718 79 LVSACLASLALVGP-DVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF 157 (390)
T ss_pred HHHHHHHHHHcCCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111111111 1111112222222222222222222222 344455566677777777777889999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 546 QRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 546 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
+..||+..|++.+++.++..+..+...+
T Consensus 158 ~~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 158 GKFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999888776666555533
No 210
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.78 E-value=6.6e-09 Score=104.82 Aligned_cols=176 Identities=14% Similarity=0.116 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
.+..+++...+...--+.+...++-.-. .++.++...|++.....+..++++++.|+++||+.|++++..+..... +
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~-~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~--~ 110 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQT-YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT--L 110 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHH-hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH--H
Confidence 3444555555555555555554444433 489999999999999999999999999999999999988766542222 2
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 469 GFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
+.++. ......|.++++=.+.+..-....+.... +...++.++|+++++++++...+|..+|-..++.+.+.
T Consensus 111 Av~~~-------~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 111 AVFAS-------GFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHH-------HHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 22222 22245555555544444444444444444 45556668999999999999999999999999998888
Q ss_pred CC-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 548 GS-WDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 548 ~g-~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.+ |+++|...+++.++..++.+++.++
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 55 9999999999999888877776544
No 211
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=2e-06 Score=84.56 Aligned_cols=313 Identities=13% Similarity=0.011 Sum_probs=176.0
Q ss_pred hhhhhhhh-----hcCCcHH-HHHHHHHHHHHHHHHHhhh---------ccCHHHHHHHHHHHHhhhhchhhHHHHHHhc
Q 008070 224 IVGGIWAD-----KFGGKPV-LGFGVIWWSVATVLTPVAA---------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 288 (579)
Q Consensus 224 ~~~G~l~D-----r~Grr~~-l~~~~~~~~~~~ll~~~a~---------~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 288 (579)
++|.++.| |+||||. ++-+..+.+..+++.+... ..+...+...-++.-+..+....+...+.-.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 78999999 9999875 3333444444444333221 1133344455677778888889999999999
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCcc---------hHHHHhhHHHHHHHHHHHhhhcCCC
Q 008070 289 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWP---------SVFYSFGSLGSIWFALWLKKAYSSP 352 (579)
Q Consensus 289 ~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-------~~gwr---------~~f~i~~~~~li~~~l~~~~~~~~~ 352 (579)
+..+++.|.+......+...|..++..+--.+-. ..+|. ..++..+.+.++.-.+..+..+|.+
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999988888888777777777654433322 11232 2234445555555555555544433
Q ss_pred CCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHH
Q 008070 353 KEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVL 432 (579)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~ 432 (579)
.+..++.+.... ..-.-++++++-|.+..++......-.++.+-....+.-+.| .|++.++.+++...
T Consensus 241 ~~~~~e~~~~i~-----------~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~ 308 (510)
T KOG3574|consen 241 ESVDEELELGIH-----------ESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVP 308 (510)
T ss_pred hhhhhhhhcCHH-----------HHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeee
Confidence 321110000000 011235667777888888888787888888888888888888 69999998876544
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCcchH--HHH-HHHHHHHHHHHHHHHHHhhc----cc--hhHHHHHHHHHHhhhhhhh
Q 008070 433 PWLTMAVFANMGGWIADTLVSKGLSIT--AVR-KIMQSIGFLGPAFFLTQLSH----VR--TPAMAVLCMACSQGSDAFS 503 (579)
Q Consensus 433 ~~~~~~ig~~~~g~l~dr~g~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~ 503 (579)
..-..++.....|++... .+++... +.. .+.......+.....-.... .. .+.+.+....+..++....
T Consensus 309 ~~plqI~l~~~~gk~ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~ 386 (510)
T KOG3574|consen 309 LVPLQIALPLYIGKWTAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSM 386 (510)
T ss_pred hhhHHHhhhhhheeecCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHH
Confidence 333444444444433321 2222111 110 01111111111111111111 00 1111121222333332222
Q ss_pred hh-hhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 008070 504 QS-GLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW 550 (579)
Q Consensus 504 ~~-~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~ 550 (579)
.. .+.-..+..+|..-|+.+.+.|+..++|+-.-..+..++.|..++
T Consensus 387 fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 387 FVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred HHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 22 333344556788999999999999999999999999999986543
No 212
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.77 E-value=4.5e-08 Score=101.55 Aligned_cols=125 Identities=14% Similarity=0.224 Sum_probs=94.1
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHH--HHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccC
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVAT--VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP 291 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~ 291 (579)
...+...++.++.|+++||+|||+.+..+..+..+.. ++..+....+.+.+++..++.|++.+...+...+++.|.+|
T Consensus 263 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 342 (394)
T TIGR00883 263 LSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFP 342 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCC
Confidence 3444555666899999999999998775555444333 22223221156667778888999988889999999999999
Q ss_pred cCchhHHHHHH-HHHHHHHHHHHHHHHHHhhcccC-cchHHHHhhHHHH
Q 008070 292 VSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGS 338 (579)
Q Consensus 292 ~~~r~~~~g~~-~~~~~lG~~lgp~i~~~l~~~~g-wr~~f~i~~~~~l 338 (579)
+++|++++++. ..+..+|..++|.+++++.+..| |++.++..++..+
T Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 343 TEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred ccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99999999984 56667899999999999999888 8887776654443
No 213
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.77 E-value=2.5e-08 Score=98.59 Aligned_cols=147 Identities=16% Similarity=0.098 Sum_probs=108.1
Q ss_pred hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHh
Q 008070 419 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQ 497 (579)
Q Consensus 419 ~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 497 (579)
.+-+..++|++++...+..++.+++.|.+.||+|+|-.+. +++..+......+...+.+...++. ..-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~---------~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMV---------AGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHH---------HHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 3456788999999999999999999999999999995544 3333333333333444444444443 33344
Q ss_pred hhhhhhhhhhhhhccccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 498 GSDAFSQSGLYSNHQDIGP-RYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
+........+....+.++. ++|++++|+...+..+|-.+||+++|.+++..|+...|+++++++++-..+.+++.+.
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 4444444444445555555 4579999999999999999999999999999999999999999999888777666443
No 214
>PTZ00207 hypothetical protein; Provisional
Probab=98.76 E-value=7.5e-07 Score=95.91 Aligned_cols=163 Identities=9% Similarity=0.045 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 403 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSH 482 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (579)
..+.+..+.+.. ++.+|++..+.+++..+... ..+..++.|++.||+|+|+++..+. .+..++.++.++..... .
T Consensus 42 ~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~--ll~~iG~ll~ala~~~~-i 116 (591)
T PTZ00207 42 FMYAFNLISGAM-QARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSM--TVFCLGTLLFALTFQEV-I 116 (591)
T ss_pred HHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHH--HHHHHHHHHHHHHhccc-c
Confidence 344555556654 55599999999988766333 3356667899999999997665443 22222222222110000 0
Q ss_pred cchhHHHHH-HHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 008070 483 VRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLY 561 (579)
Q Consensus 483 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~ 561 (579)
....+.+.+ ..+.+.+.............+ ..|++||.+.|+......+|+++.+.+...+.. .++...|++.+++.
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~-~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~ 194 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLS-VFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFA 194 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 122333333 333333332233333333333 457899999999999999999875555555544 35778888888777
Q ss_pred HHHHHHHHHhh
Q 008070 562 IIGTLVWNLFA 572 (579)
Q Consensus 562 ~l~~~~~~~~~ 572 (579)
++..++++.+.
T Consensus 195 ~vv~ll~~~~v 205 (591)
T PTZ00207 195 LVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHhhe
Confidence 76666555543
No 215
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.75 E-value=1.7e-07 Score=99.26 Aligned_cols=117 Identities=14% Similarity=0.187 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcc
Q 008070 210 LLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 289 (579)
Q Consensus 210 ~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 289 (579)
.+.....+...++.+++++++||+|+|+++.++.++.+++.++..+.++ +.+.+++..++.|++.+...+...++++|.
T Consensus 261 ~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (437)
T TIGR00792 261 YMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS-NLPLILVLIILAGFGQNFVTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3344456677777899999999999999999999888888877766542 566777888889999998899999999988
Q ss_pred cC-------cCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Q 008070 290 IP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 327 (579)
Q Consensus 290 ~~-------~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr 327 (579)
.+ ++++|.++|+.+....+|..+++.+.+++.+..||.
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 75 456799999999999999999999999998877763
No 216
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.73 E-value=2.2e-07 Score=102.43 Aligned_cols=160 Identities=12% Similarity=0.094 Sum_probs=107.8
Q ss_pred HHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh--------
Q 008070 410 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-------- 481 (579)
Q Consensus 410 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 481 (579)
.++.+ ++.++++..+.|++.+...++.+++.++.+++.||.+|++++..+. ++..++.++.++.-....
T Consensus 55 ~l~~i-ek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~--ll~~lg~ll~alphf~~~~y~~~~~~ 131 (633)
T TIGR00805 55 SLTTI-ERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC--AIMGLGSFLLSLPHFLSGRYSYSTTV 131 (633)
T ss_pred hchhh-hhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH--HHHHHHHHHHhChHHhcCCccccccc
Confidence 34444 4559999999999999999999999999999999999999877654 333344333332211000
Q ss_pred ----------------c-----------------c--c-hhHHH-HHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHH
Q 008070 482 ----------------H-----------------V--R-TPAMA-VLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 524 (579)
Q Consensus 482 ----------------~-----------------~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 524 (579)
. . . .+..+ +.-++.+.+.....+.....+.+.+++++++.+.|
T Consensus 132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~ 211 (633)
T TIGR00805 132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIG 211 (633)
T ss_pred cccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHH
Confidence 0 0 0 12222 23334444444444444444555578899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 525 LSNTAGVLAGVFGTAATGYILQRG----------------------SWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 525 ~~~~~~~lg~~ig~~l~g~l~~~~----------------------g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+.+....+|.++|+.++|++.+.+ +|+..|++.+++.++..+.++++.
T Consensus 212 i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 212 ILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999988642 266678887777776665555543
No 217
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.73 E-value=5.1e-06 Score=91.13 Aligned_cols=135 Identities=21% Similarity=0.288 Sum_probs=106.1
Q ss_pred HHHHHHHhhhhhhhhhhhhh-cCCcHHHHHHHHHHHHHHHHHHhhhcc------CHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 213 FSAFLLCNMDRIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARI------GLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 213 ~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ll~~~a~~~------~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
........+..+++|+++|+ +|+++.++++.++..++.++.++.... .....+++-.+.++|.|+.-+...+.
T Consensus 30 ~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf 109 (654)
T TIGR00926 30 HTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAF 109 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhh
Confidence 33444455666899999997 599999999999999999888775310 12335677788889999999999999
Q ss_pred HhcccCcC---chhHHHHHHHHHHHHHHHHHHHHHHHhhccc-------CcchHHHHhhHHHHHHHHHHHhh
Q 008070 286 LSKWIPVS---ERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-------GWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 286 i~~~~~~~---~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-------gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
..|.++++ +|-..+.++..+.++|.++++++.+++.+.+ +|...|.+.+++.++.+++....
T Consensus 110 ~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 110 GGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred hHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999754 3677889999999999999999999887443 69999999888887776665543
No 218
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.72 E-value=1.2e-06 Score=94.58 Aligned_cols=168 Identities=10% Similarity=0.029 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHH
Q 008070 395 ISHFCHNWGTFILLTWMPTYYNQV----LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGF 470 (579)
Q Consensus 395 l~~~~~~~~~~~~~~~~p~~l~~~----~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 470 (579)
+..+....-...+....|.+-.+. ...+..+.+++.+...++.+++.++.|++.||+|||+.+..+. .+..++.
T Consensus 23 ~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~--~~~~v~~ 100 (502)
T TIGR00887 23 VGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL--IIMIIAT 100 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH--HHHHHHH
Confidence 333333333334444455443321 2345567788899999999999999999999999997654322 1111111
Q ss_pred HHHHHHHHHhhcc-c---hhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 471 LGPAFFLTQLSHV-R---TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 471 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
+........ . ...+.+.-++.+.+.+...+.......+..|++.||++.++.+....+|..+++.+...+..
T Consensus 101 ----~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 101 ----VASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred ----HHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111110 0 12233333344444444445555556677888999999999999999999999988776542
Q ss_pred -----------------------cCChHHHHHHHHHHHHHHHHHH
Q 008070 547 -----------------------RGSWDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 547 -----------------------~~g~~~~~~~~~~~~~l~~~~~ 568 (579)
..+|+..+.+.++..++..++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~ 221 (502)
T TIGR00887 177 GFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR 221 (502)
T ss_pred HhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH
Confidence 1379999977766666554443
No 219
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.71 E-value=1.5e-06 Score=91.90 Aligned_cols=163 Identities=12% Similarity=0.086 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC---CChhh---hhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHH
Q 008070 396 SHFCHNWGTFILLTWMPTYYNQVLK---FNLTE---SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIG 469 (579)
Q Consensus 396 ~~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~---~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 469 (579)
..++...-...+....| ++.++++ .+..+ .+..+....++..++.++.|+++||+|||+.+..+. ....++
T Consensus 30 ~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~--~~~~~~ 106 (432)
T PRK10406 30 GNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISV--CMMCFG 106 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH--HHHHHH
Confidence 34444444444433444 4555453 44443 334445555666699999999999999997654322 111111
Q ss_pred HHHHHHHHHHhhcc-----chh-HHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 470 FLGPAFFLTQLSHV-----RTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGY 543 (579)
Q Consensus 470 ~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~ 543 (579)
.+..++ .... ..+ .+.+.-++.+.+.+...+.......+..|+++||.+.++.......|.++++.+...
T Consensus 107 ~~~~~~----~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 107 SLVIAC----LPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred HHHHhh----cCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 0100 011 122222334444444444444455666788999999998888777787777776555
Q ss_pred HH--------hcCChHHHHHHHHHHHHHHH
Q 008070 544 IL--------QRGSWDDVFKVAVVLYIIGT 565 (579)
Q Consensus 544 l~--------~~~g~~~~~~~~~~~~~l~~ 565 (579)
+. +..||+..|.+.++..++..
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHHH
Confidence 43 25799999998777665543
No 220
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.70 E-value=5.6e-08 Score=94.96 Aligned_cols=122 Identities=13% Similarity=0.198 Sum_probs=96.0
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCH--HHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGL--PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAF 301 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~--~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~ 301 (579)
++.+++.||+|||+.+....+++++..++...+.+.|. .++.++|++. ++.+.+.+.|..|.+|..-|+...|.
T Consensus 399 LIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTavRatgvGt 474 (528)
T KOG0253|consen 399 LITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAVRATGVGT 474 (528)
T ss_pred hHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccchhhhhcchhh
Confidence 88999999999999999999999999998877764333 2234455544 44566777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCC
Q 008070 302 VYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSS 351 (579)
Q Consensus 302 ~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~ 351 (579)
...+..+|+++.|+++ +....+-..+..+.+.+.++..+...+++-|+
T Consensus 475 cSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 475 CSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999 43344555666777777777777777765544
No 221
>PRK09952 shikimate transporter; Provisional
Probab=98.69 E-value=2.4e-06 Score=90.48 Aligned_cols=165 Identities=10% Similarity=0.030 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCChhhhhHHh-----HHHHHHHHHHHHHHHHHhhhhhccCcchHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVL--KFNLTESGLFC-----VLPWLTMAVFANMGGWIADTLVSKGLSITAVR 462 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~--g~s~~~~g~~~-----~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~ 462 (579)
++...+..++-+.-...+....|.+..+.+ +.++.. +.+. .+..++..++.++.|+++||+|||+.+..+.
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~- 101 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTV- 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHH-
Confidence 334444444444444444445555555544 566653 4432 2334556788889999999999997554321
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhH---------HHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHH
Q 008070 463 KIMQSIGFLGPAFFLTQLSHVRTPA---------MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLA 533 (579)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 533 (579)
++.++........+... +.+.-++.+.+.+...+.......+..|+++||...+..+....+|
T Consensus 102 --------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 102 --------WMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred --------HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 11111111111112211 2222223344443444444444556678899999999998888888
Q ss_pred HHHHHHHHHHHHh--------cCChHHHHHHHHHHHHHH
Q 008070 534 GVFGTAATGYILQ--------RGSWDDVFKVAVVLYIIG 564 (579)
Q Consensus 534 ~~ig~~l~g~l~~--------~~g~~~~~~~~~~~~~l~ 564 (579)
..+++.+.+.+.. ..||+..|++.++..++.
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~ 212 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA 212 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH
Confidence 8888877776653 479999998877665443
No 222
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.65 E-value=4.2e-07 Score=93.26 Aligned_cols=184 Identities=13% Similarity=0.119 Sum_probs=125.6
Q ss_pred Hhh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-hccCcc
Q 008070 384 ILS-KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLK----FNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLS 457 (579)
Q Consensus 384 l~~-~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g----~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~ 457 (579)
.++ .+.++.+...-+.--+++|++...+..|+...++ ++.+++.-++..+....-+..+++||++||+ |+|+.+
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 344 3457777888888889999999999999988888 9999888888777777777888999999996 777654
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHHHHHHhhhhhhhhhhhhhhccccCC--CchhHHHHHHHHHHHHHH
Q 008070 458 ITAVRKIMQSIGFLGPAFFLTQLSH-VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP--RYAGVLLGLSNTAGVLAG 534 (579)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~lg~ 534 (579)
..+. .+...+...+.... .....+.+....+..+.+.+=+.......+..++ .+|-..+++..+..++|+
T Consensus 96 ~lGa-------il~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs 168 (498)
T COG3104 96 VLGA-------ILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGS 168 (498)
T ss_pred HHHH-------HHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHH
Confidence 4332 22222222222221 1122222222223333222222222222222333 236778888889999999
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 535 VFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 535 ~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.++|.+.+++.+.+||...|...++-+.++.+.+++.++.
T Consensus 169 l~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 169 LIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999999999999999999999999999999988877653
No 223
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.63 E-value=2.6e-06 Score=91.28 Aligned_cols=176 Identities=10% Similarity=0.097 Sum_probs=105.3
Q ss_pred hhchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHH
Q 008070 385 LSKAPVWALIISHFCHNWGTF----ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITA 460 (579)
Q Consensus 385 ~~~~~~~~~~l~~~~~~~~~~----~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~ 460 (579)
+++++++..+....+.....+ .....++....+ +|-+ ....++.....++..+..++.|+++|.+|||...+.+
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g 114 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIG 114 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Confidence 455666555444443333222 223345555555 6744 5667777788889999999999999999999655433
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008070 461 VRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAA 540 (579)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l 540 (579)
. .+..++.++ ....++...++....+.+...+..........+.+|.+.|+...++.....-....+++.+
T Consensus 115 ~--~l~vvG~Iv-------~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 115 S--LLGVVGSIV-------CATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLI 185 (599)
T ss_pred H--HHHHhHHHH-------hhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH
Confidence 2 222222221 2222333333333222222223333333345666777889888777766555556677888
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 541 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 541 ~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
...+....+|++.|++.+++..+++++.+++
T Consensus 186 a~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 186 AQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 7777777899999999988877776655444
No 224
>PRK15075 citrate-proton symporter; Provisional
Probab=98.63 E-value=2.8e-06 Score=89.91 Aligned_cols=160 Identities=12% Similarity=0.043 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHh-HHH-----HHHHHHHHHHHHHHhhhhhccCcchHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFC-VLP-----WLTMAVFANMGGWIADTLVSKGLSITAVRK 463 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~-~~~-----~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~ 463 (579)
....++..++.+.-...+....|.+.++ ++.++.+.+.+. +.. .+...++.++.|++.||+|||+.+..+.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~-- 93 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTL-- 93 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHH--
Confidence 4455666666666677777777876666 787776654332 221 2223467889999999999998655432
Q ss_pred HHHHHHHHHHHHHHHHhhccchhH---------HHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHH
Q 008070 464 IMQSIGFLGPAFFLTQLSHVRTPA---------MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAG 534 (579)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 534 (579)
....++.+. ... .+... +.+.-++.+.+.....+.......+..|+++|++++++.....++|.
T Consensus 94 ~~~~~~~~l-----~~~--~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 94 SIMASGTLL-----IAF--VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHH-----HHh--CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 111111111 111 11111 12222223333322233333345566788999999999999888888
Q ss_pred HHHHHHHHHHH--------hcCChHHHHHHHHH
Q 008070 535 VFGTAATGYIL--------QRGSWDDVFKVAVV 559 (579)
Q Consensus 535 ~ig~~l~g~l~--------~~~g~~~~~~~~~~ 559 (579)
.+++.+++.+. +..||+..|++..+
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 88888777663 46799999987543
No 225
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.59 E-value=9.3e-07 Score=85.85 Aligned_cols=333 Identities=12% Similarity=0.098 Sum_probs=201.8
Q ss_pred hhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHH
Q 008070 228 IWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMY 307 (579)
Q Consensus 228 ~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~ 307 (579)
.+.|..-.|+++++-.+...+..++.-+.+ +.+.+=+.-++.|...+ ...+.++++-..++++++.++.+......-
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L 140 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFL 140 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHH
Confidence 368888899998888777777777778888 88888888899898876 567888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCcc--hHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhhcC-Ccccccc--------
Q 008070 308 LGSVTGLAVSPILIQKFGWP--SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGG-SISKEAV-------- 376 (579)
Q Consensus 308 lG~~lgp~i~~~l~~~~gwr--~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------- 376 (579)
.|..+|..++..++..-.+. ..=.+.-....+..++.+++ |..++..-....+++....+. +...+..
T Consensus 141 ~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fL-P~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~ 219 (433)
T KOG3810|consen 141 VGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFL-PRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGA 219 (433)
T ss_pred HHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhC-CCCchhhhhhcccccceeccchhcCccchhhHHHHHH
Confidence 99999999999888643332 22222222223333334443 333321111111110000000 0000000
Q ss_pred ---cchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhh
Q 008070 377 ---SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL-KFNLTESGLFCVLPWLTMAVFANMGGWIADTLV 452 (579)
Q Consensus 377 ---~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g 452 (579)
-...+.+..++|.+....+-..+...+++-+..|......+.- .-....-|..-++..+.++++.+..|++.-.+.
T Consensus 220 ~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~ 299 (433)
T KOG3810|consen 220 FVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWN 299 (433)
T ss_pred HHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccc
Confidence 0123455667888888788888888888888877777766642 111223455666777778888888888866665
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhh-hhhhhhhccccCCCchhHHHHHHHHHHH
Q 008070 453 SKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFS-QSGLYSNHQDIGPRYAGVLLGLSNTAGV 531 (579)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 531 (579)
|.+- .++.++.+.-+..+.........|+..+...+.-....+. ..+..........+.-|-.+|+.+++.-
T Consensus 300 r~g~-------~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl 372 (433)
T KOG3810|consen 300 RWGD-------LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL 372 (433)
T ss_pred hhhH-------HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH
Confidence 5532 3333334443444444445555665555554443333333 3333335556677888999998777655
Q ss_pred HHHHHHHHHHHHHHhcCC-----------hHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 532 LAGVFGTAATGYILQRGS-----------WDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 532 lg~~ig~~l~g~l~~~~g-----------~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
+-..+-.. ...|.-| |..-|++.+++.+++..+.....++
T Consensus 373 ~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~ 423 (433)
T KOG3810|consen 373 ILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRR 423 (433)
T ss_pred HHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhc
Confidence 54443332 2334211 4456778888888886665555443
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.59 E-value=7.3e-07 Score=93.89 Aligned_cols=150 Identities=16% Similarity=0.196 Sum_probs=109.8
Q ss_pred hhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHH
Q 008070 418 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-HVRTPAMAVLCMACS 496 (579)
Q Consensus 418 ~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 496 (579)
.+.++..+-+++++....+.+++.+..|+++||+|.|+++..+. .+.....++.... ....+.++++=++.|
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~-------~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISG-------LISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHH-------HHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 57889999999999999999999999999999999997654322 1111111111111 122222233333444
Q ss_pred hhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 497 QGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~-~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
.+.+...+.......+-.|+++|++..++.....++|.+++-+++|++.+. .||+..|++.+++.++..++++.+.++
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 444444444444455668889999999999999999999999999999999 999999999999999888888777654
No 227
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.58 E-value=4.8e-07 Score=90.86 Aligned_cols=132 Identities=20% Similarity=0.264 Sum_probs=108.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhccc
Q 008070 211 LCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI 290 (579)
Q Consensus 211 l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~ 290 (579)
+.....+...++.+++|+|.||+|.|+++.+++++..+.++..-+.. .-..+.++..+.|+..|..+...-++.++.+
T Consensus 293 ~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv 370 (438)
T COG2270 293 IGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--GELDFWILGLLVGTSLGGAQASSRSYLARLV 370 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--ccHHHHHHHHHHHHhcchHHHHHHHHHHHhC
Confidence 33344456667779999999999999999999999998888777766 5667888889999999999999999999999
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC-cchHHHHhhHHHHHHHHHH
Q 008070 291 PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALW 344 (579)
Q Consensus 291 ~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g-wr~~f~i~~~~~li~~~l~ 344 (579)
|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++.++.+++.
T Consensus 371 p~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 371 PKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred CCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 99999999999999999999999999999887654 5666655554444433333
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.56 E-value=1.7e-06 Score=91.90 Aligned_cols=111 Identities=15% Similarity=0.165 Sum_probs=93.4
Q ss_pred HHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcC--
Q 008070 216 FLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS-- 293 (579)
Q Consensus 216 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~-- 293 (579)
.+...++.++++++.||+|+|+++.++.++..++.++..+.+..+++.+++..++.|+|.+...+...++++|..+.+
T Consensus 274 ~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~ 353 (448)
T PRK09848 274 LVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY 353 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 445666778999999999999999999999888888777755335677777788999999999999999999988754
Q ss_pred -----chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 008070 294 -----ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 326 (579)
Q Consensus 294 -----~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gw 326 (579)
++|..+++.+....+|..+|+.+.+.+.+..|+
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 358999999999999999999999988776665
No 229
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.53 E-value=5.9e-07 Score=88.56 Aligned_cols=116 Identities=16% Similarity=0.063 Sum_probs=84.4
Q ss_pred ChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhh
Q 008070 422 NLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDA 501 (579)
Q Consensus 422 s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
+....|++.+.+.+...+.++.+|.++||+|||..+ .++++..++..+......+...+++.=++++..-+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvl---------l~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg 136 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVL---------LACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG 136 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 446688999999999999999999999999999543 33334444444444444444333333344454444
Q ss_pred hhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 502 FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
..........+..++++|+.+++.+.+...+|.++||.++|++..
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 445555555666777999999999999999999999999999988
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.49 E-value=3.6e-05 Score=76.06 Aligned_cols=134 Identities=29% Similarity=0.561 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHH
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 285 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 285 (579)
+...+......+...+..++.|.+.||+|||+.++.+.....++.+++++....+.+.+++.|+++|++.+...+...++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 45566666667777777799999999999998888888776666677777762137889999999999999999999999
Q ss_pred HhcccCc-CchhHHHHHHHH-HHHHHHHHHHHHHHHhhcc--cCcchHHHHhhHHHHH
Q 008070 286 LSKWIPV-SERSRSLAFVYS-GMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLGSI 339 (579)
Q Consensus 286 i~~~~~~-~~r~~~~g~~~~-~~~lG~~lgp~i~~~l~~~--~gwr~~f~i~~~~~li 339 (579)
+.+++|+ ++|+...+.... ...+|.++++.+++.+... .+|++.|.+.......
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 9999987 678999999888 5888999999888777654 6799876666555443
No 231
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.49 E-value=5.9e-06 Score=77.46 Aligned_cols=327 Identities=13% Similarity=0.087 Sum_probs=162.9
Q ss_pred HHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCc
Q 008070 215 AFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE 294 (579)
Q Consensus 215 ~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~ 294 (579)
++....+...+.|.++|+-|||+..+.-.+.+.++++ .-.++ .+-.++++|++.|++.+..+.+..++...-- .++
T Consensus 81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSp--qYkVLmVGR~LGGiaTsLLFSaFEsWliaEH-nek 156 (454)
T KOG4332|consen 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSP--QYKVLMVGRVLGGIATSLLFSAFESWLIAEH-NEK 156 (454)
T ss_pred ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCC--ceEEEeehhhhhhHHHHHHHHHHHHHHHHHh-hhc
Confidence 3334445557889999999999976655555544443 34455 6778999999999999999888887654433 134
Q ss_pred hhHHHHHHH--------HHHHHHHHHHHHHHHHhhccc--CcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHh
Q 008070 295 RSRSLAFVY--------SGMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 364 (579)
Q Consensus 295 r~~~~g~~~--------~~~~lG~~lgp~i~~~l~~~~--gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (579)
|+.-.-+.. .+..+-.+++.+.+-.+.+.+ |--.+|-..+.+..+...+.+.-..|.-.++.+.++-...
T Consensus 157 r~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltq 236 (454)
T KOG4332|consen 157 RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQ 236 (454)
T ss_pred cCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHH
Confidence 432222211 333444555566666666654 4555665555444444443333222221111111110000
Q ss_pred hhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHH
Q 008070 365 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT-WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 443 (579)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~ 443 (579)
.....+.+..+.++.++-....++-..++.+.. |-|..--+..+ .--|++++.+.++.++|+-+
T Consensus 237 ------------f~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSl 301 (454)
T KOG4332|consen 237 ------------FKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSL 301 (454)
T ss_pred ------------hhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHH
Confidence 001234456677776666665555555555443 33432211112 22477888888888888887
Q ss_pred HHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh-----ccchhHHHHHHHHHH-hhhhhhhhhhhhhhccccCCC
Q 008070 444 GGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-----HVRTPAMAVLCMACS-QGSDAFSQSGLYSNHQDIGPR 517 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 517 (579)
..++..|-..+--.. ..+...+....+.+.... ....+...++.++.. ...+.+.+.....-.+.+|.+
T Consensus 302 a~Rl~s~s~~~ve~y-----mqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEe 376 (454)
T KOG4332|consen 302 ASRLLSRSSPKVESY-----MQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEE 376 (454)
T ss_pred HHHHHhcCCcccchH-----HHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHH
Confidence 777766554432111 111111111111111111 111222223333333 333333444444555667778
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHH
Q 008070 518 YAGVLLGLSNTAGVLAGVFGTAATGYILQR--GSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 518 ~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~--~g~~~~~~~~~~~~~l~~~~ 567 (579)
.|++.+-++..--++-.-++-.. .-.+. .+-+..|-++.+...++.+.
T Consensus 377 arstimNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 377 ARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHhhhhhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHH
Confidence 88877665544333322221110 00111 34456677766666655443
No 232
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.46 E-value=4e-06 Score=87.03 Aligned_cols=125 Identities=19% Similarity=0.295 Sum_probs=99.3
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHH----HHHHHHHhhhhchhhHHHHHHhcccCcCchhHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLL----IMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSL 299 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll----~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~ 299 (579)
.+.+++..|+|.|++++++.+.+++=..+.+...+ +.+..+ +...+.|+..+..+.+...++.+.+|++.|+++.
T Consensus 261 ~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~-~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q 339 (400)
T PF03825_consen 261 FFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD-PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQ 339 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHH
Confidence 57789999999999999999999999999888731 444333 3345799999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHhhcccCcc------hHHHHhhHHHHHHHHHHHhhhc
Q 008070 300 AFVYSG-MYLGSVTGLAVSPILIQKFGWP------SVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 300 g~~~~~-~~lG~~lgp~i~~~l~~~~gwr------~~f~i~~~~~li~~~l~~~~~~ 349 (579)
+++... .++|..+|..++|++.+++|-+ ..+.+.+++.++..++.+++.+
T Consensus 340 ~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 340 GLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 998764 6899999999999999987744 3445555555555555554444
No 233
>PRK09669 putative symporter YagG; Provisional
Probab=98.44 E-value=3.4e-06 Score=89.55 Aligned_cols=172 Identities=11% Similarity=0.013 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh----hhccCcchHHHHHHHHHH
Q 008070 393 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT----LVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr----~g~~~~~~~~~~~~~~~~ 468 (579)
..+..+........+..+++.|+.+.+|+++..+|.++.+.-+...+..++.|+++|| +||||..+.. ..+
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~-----~~~ 88 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLW-----FAI 88 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHH-----HHH
Confidence 3344444455566667889999999999999999999999999999999999999999 5665543311 111
Q ss_pred HHHHHHHHHHHhhc---cch-hHHHHHHHHHHhhhhhhhhhhhhhhccc-c-CCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008070 469 GFLGPAFFLTQLSH---VRT-PAMAVLCMACSQGSDAFSQSGLYSNHQD-I-GPRYAGVLLGLSNTAGVLAGVFGTAATG 542 (579)
Q Consensus 469 ~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~g~~~g~~~~~~~lg~~ig~~l~g 542 (579)
...+....+...+. ... .+..+...+...+... ......+...+ . ++++|++..+.......+|+.+++.+..
T Consensus 89 ~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~ 167 (444)
T PRK09669 89 PFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTA-INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIAL 167 (444)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHh-hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111 111 2222222222222222 22222233222 2 4478888888888888888888876655
Q ss_pred HHHhc-------CChHHHHHHHHHHHHHHHHHHHH
Q 008070 543 YILQR-------GSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 543 ~l~~~-------~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
.+... .+|...+.+.+++.++..++.++
T Consensus 168 pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 168 PLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 54432 35666666666666555544433
No 234
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.6e-05 Score=79.52 Aligned_cols=161 Identities=11% Similarity=0.049 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHH-Hhhcc
Q 008070 405 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLT-QLSHV 483 (579)
Q Consensus 405 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 483 (579)
...+-.+-..+++.++++..+++++...+..+..+..+..+++.+|+|.|+-+..+ +.+...+..+. .....
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg-------L~l~avg~~lF~pAa~~ 101 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG-------LLLYAVGAALFWPAASS 101 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH-------HHHHHHHHHHHhhhhhh
Confidence 33344445566777999999999999999999999999999999999999654332 22222222222 12223
Q ss_pred chhHHHHHHHHHHhhhhhhhhhhhhhhcc-ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Q 008070 484 RTPAMAVLCMACSQGSDAFSQSGLYSNHQ-DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR--------------- 547 (579)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~--------------- 547 (579)
..+...+..+++.....+...+....+.. .-+++.....+.+.+.+..+|++++|++++.+..+
T Consensus 102 ~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~ 181 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIK 181 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHH
Confidence 33444443333333333444444444333 34556788899999999999999999999999883
Q ss_pred ----CChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 548 ----GSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 548 ----~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
..++..|...+...++..+.....+
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 2366677777766666655555544
No 235
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.40 E-value=1.5e-06 Score=92.75 Aligned_cols=132 Identities=18% Similarity=0.210 Sum_probs=115.1
Q ss_pred HHHHHhhhhhhhhhhhhhcC--CcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCc
Q 008070 215 AFLLCNMDRIVGGIWADKFG--GKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV 292 (579)
Q Consensus 215 ~~~~~~l~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~ 292 (579)
..+...+++++.|+++|+.. ++.+..+++++.+++.+.+++++ +++.+++.-++.|+..|........++.|+...
T Consensus 342 igi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~ 419 (509)
T KOG2504|consen 342 IGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGL 419 (509)
T ss_pred HHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 33455566699999999988 45667888888888888999999 899999999999999998888888899999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC-cchHHHHhhHHHHHHHHHHHhhh
Q 008070 293 SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALWLKKA 348 (579)
Q Consensus 293 ~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g-wr~~f~i~~~~~li~~~l~~~~~ 348 (579)
++...+.|+.....+++.++||++++++.+..+ |...|+..++..++..+.+++..
T Consensus 420 ~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 420 EKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999999999998877 99999999988887776655544
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.40 E-value=7.9e-06 Score=87.44 Aligned_cols=173 Identities=14% Similarity=0.116 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhh----hhhccCcchHHHHHHHHH
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD----TLVSKGLSITAVRKIMQS 467 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~d----r~g~~~~~~~~~~~~~~~ 467 (579)
...+..+........+..|++.|+.+.+|+++..+|.++.+.-+..++..++.|+++| |+||||..+.. +
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~------g 83 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILI------G 83 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhh------h
Confidence 3445555566677777889999999999999999999999999999999999999999 55887654321 1
Q ss_pred HHHHHHHHHHHHhhc--cc--hhHHHHHHHHHHhhhhhhhhhhhhhhccc-c-CCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008070 468 IGFLGPAFFLTQLSH--VR--TPAMAVLCMACSQGSDAFSQSGLYSNHQD-I-GPRYAGVLLGLSNTAGVLAGVFGTAAT 541 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~g~~~g~~~~~~~lg~~ig~~l~ 541 (579)
.......+.++.... .. ..++..+...+.............+...+ . ++++|.+..+.......+|+.+.+.+.
T Consensus 84 ~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 84 TLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111111 11 11222222222222222233333333333 3 468899988887777777777766655
Q ss_pred HHHHhc-------CChHHHHHHHHHHHHHHHHHHHH
Q 008070 542 GYILQR-------GSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 542 g~l~~~-------~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
..+.+. .+|.....+.+++.+++.++.++
T Consensus 164 ~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 164 LPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 544322 23555555555555554444433
No 237
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.40 E-value=8.3e-06 Score=85.27 Aligned_cols=143 Identities=17% Similarity=0.153 Sum_probs=107.2
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhcc--CH---H--HHHHHHHHHHhhhhc-hhhHHHHH
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI--GL---P--FLLIMRAFMGIGEGV-AMPAMNNM 285 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~--~~---~--~ll~~r~l~Gig~g~-~~~~~~~~ 285 (579)
...+...+..+++..+.||+|||++++++..++.+..+++...... .. . ..+++.++..++.+. ..|...-+
T Consensus 313 ~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi 392 (485)
T KOG0569|consen 313 GIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFI 392 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHH
Confidence 3444555566899999999999999999999999888876644211 11 1 123344443333332 35778889
Q ss_pred HhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChh
Q 008070 286 LSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE 357 (579)
Q Consensus 286 i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~ 357 (579)
.+|++|++.|+.++++......++..+-...-..+.+.+|- +.|++..+.+++..+..++.+||++.+...
T Consensus 393 ~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~ 463 (485)
T KOG0569|consen 393 GAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPY 463 (485)
T ss_pred HHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHH
Confidence 99999999999999999999988888887777777777776 788888888888888999999988765543
No 238
>PRK11462 putative transporter; Provisional
Probab=98.40 E-value=1.4e-05 Score=85.09 Aligned_cols=174 Identities=9% Similarity=-0.025 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh----hhccCcchHHHHHHHHH
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT----LVSKGLSITAVRKIMQS 467 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr----~g~~~~~~~~~~~~~~~ 467 (579)
...+..+..+.....+..|+..|+.+..|+++..+|.++.+.-+...+.-++.|+++|| +||||..+.. ..
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~-----g~ 87 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLF-----GA 87 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhH-----HH
Confidence 34444445566666777899999999999999999999999999999999999999996 5776654321 11
Q ss_pred HHHHHHHHHHHHhhccc---hhHHHHHHHHHHhhhhhhhhhhhhhhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008070 468 IGFLGPAFFLTQLSHVR---TPAMAVLCMACSQGSDAFSQSGLYSNHQDI--GPRYAGVLLGLSNTAGVLAGVFGTAATG 542 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~lg~~ig~~l~g 542 (579)
+.+.+...++...+..+ ...+..+...+.............+...+. ++++|++..++......+|..+++.+..
T Consensus 88 i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 88 LPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111111 122222222222222223333333333222 3589999999999999998888887766
Q ss_pred HHHhcC-------ChHHHHHHHHHHHHHHHHHHHH
Q 008070 543 YILQRG-------SWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 543 ~l~~~~-------g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
.+.... +|.....+.+++.+++.++.+.
T Consensus 168 plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 168 PLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 655442 4566666666665555544443
No 239
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.36 E-value=6.5e-06 Score=82.73 Aligned_cols=123 Identities=10% Similarity=0.071 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhc
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 288 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 288 (579)
.........+..+++++.+++.||+|+|+++.++.++..++.++....+ +... ...-++.|++.+..+|...+...+
T Consensus 181 ~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~--~~~~-~~~~~l~g~~~s~i~P~~~s~a~~ 257 (310)
T TIGR01272 181 AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH--GYVA-MWFVLALGLFNSIMFPTIFSLALN 257 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC--CHHH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445566667778889999999999999999888888887776665554 3332 345558899999999999999999
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHH
Q 008070 289 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 336 (579)
Q Consensus 289 ~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~ 336 (579)
.+|+ +.+.+.++. ....+|..++|++.|.+.+..|.+..|++..+.
T Consensus 258 ~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 258 ALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 8864 456666775 566799999999999999999999888754433
No 240
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.35 E-value=7.3e-05 Score=71.70 Aligned_cols=142 Identities=13% Similarity=0.021 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhh-----ccCHHHHHHHHHHHHhhhhchhhH
Q 008070 207 VVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-----RIGLPFLLIMRAFMGIGEGVAMPA 281 (579)
Q Consensus 207 ~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~-----~~~~~~ll~~r~l~Gig~g~~~~~ 281 (579)
.+-.+.....++..++ ++.|.+.|++|++.++++|.+...++..+..++- ..++|.+.+..++.|.+.+....+
T Consensus 38 ~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta 116 (250)
T PF06813_consen 38 QLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTA 116 (250)
T ss_pred HHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhH
Confidence 3455666666666664 8899999999999999999999999988866542 125678888888888888877778
Q ss_pred HHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCC
Q 008070 282 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSS 351 (579)
Q Consensus 282 ~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~ 351 (579)
+.....+.|| ++||.+.|+.-...++++.+-..+...+.+.-.-.. +...+....+..++..++.+..
T Consensus 117 ~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 117 SLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHhhheecc
Confidence 7777788896 689999999999999999887777766665422333 3334443333333333334433
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.35 E-value=7.8e-06 Score=84.26 Aligned_cols=180 Identities=12% Similarity=0.077 Sum_probs=131.9
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHH
Q 008070 383 LILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVR 462 (579)
Q Consensus 383 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~ 462 (579)
+++.++....+++..++..++...+.+++--++++ ++..+...|...+..-.+-++.-++.+++.+|+|+.+++..
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~l--- 441 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYL--- 441 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeee---
Confidence 46778887778888888888888888888777887 67677777877777778888888999999999999987653
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhc-cccCCCchhHHHHHHHHH-HHHHHHHHHHH
Q 008070 463 KIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNH-QDIGPRYAGVLLGLSNTA-GVLAGVFGTAA 540 (579)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~-~~lg~~ig~~l 540 (579)
++.+...-++......++|.++.+=++-+......+....++. ...||+.+.++.|+.... ..+|-.+|.++
T Consensus 442 ------gLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 442 ------GLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred ------hhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 2223333333333345556655555555544455555544444 446889999999988766 46799999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 541 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 541 ~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
+|.+.+.+|-+..|..+++.+++.+++...+.
T Consensus 516 GG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 516 GGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998888877777665553
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.32 E-value=1.5e-06 Score=89.50 Aligned_cols=122 Identities=17% Similarity=0.190 Sum_probs=111.5
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY 303 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~ 303 (579)
++.+++..++|+-+++.+++.+.++=.+.....+ |.|..+..-+++|+..+..+.+..+++++..||+-+..+.++++
T Consensus 424 ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~ 501 (618)
T KOG3762|consen 424 FFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQ 501 (618)
T ss_pred HHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHH
Confidence 7789999999999999999999999999999999 99999999999999999999999999999999999999999876
Q ss_pred HH-HHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhh
Q 008070 304 SG-MYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 304 ~~-~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
.. .++|--+|.+|||.+.+.++-|..|++.++.+++.+++....
T Consensus 502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 54 578999999999999999999999999998888776665544
No 243
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.29 E-value=2.2e-05 Score=83.73 Aligned_cols=174 Identities=17% Similarity=0.127 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhh---c-cCcchHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV---S-KGLSITAVRKIM 465 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g---~-~~~~~~~~~~~~ 465 (579)
+..+...++..+.. +.....++.++++.+|++..+.+.+.++..+...+-. ++|.++||++ + |+... +
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l------~ 99 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYL------V 99 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHH------H
Confidence 34445456666666 6667778888888799999999988888888887755 4999999996 2 33221 1
Q ss_pred HHHHHHHHHHHHHHhhc-cchhHHHHHHHHHHhhhhhhhhhhhhh-hccccCCCch---hHHHHHHHHHHHHHHHHHHHH
Q 008070 466 QSIGFLGPAFFLTQLSH-VRTPAMAVLCMACSQGSDAFSQSGLYS-NHQDIGPRYA---GVLLGLSNTAGVLAGVFGTAA 540 (579)
Q Consensus 466 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---g~~~g~~~~~~~lg~~ig~~l 540 (579)
... ++.....+..... .+......+++.+..+.....-...-. +.+..+ +.+ +...++......+|..+++.+
T Consensus 100 ~~~-~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 100 LSG-LLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHH-HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 111 1110111111111 222222222222222222322222222 333333 333 334444445566899999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 541 TGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 541 ~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
+|.+.+..+|+..|++.+++.++..+...++..
T Consensus 178 ~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 178 GGPLLDKTLTRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999988888777554444433
No 244
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.24 E-value=2.2e-05 Score=74.34 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=77.6
Q ss_pred hhhhhhhhhcCCcHHHHHHHHH-HHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIW-WSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFV 302 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~-~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~ 302 (579)
++.|.++|++|++.+.+.+..+ ..++-....|+. +.=.+...+.|+..+.........++...|+++.|.+.|..
T Consensus 318 pvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~----lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~ 393 (459)
T KOG4686|consen 318 PVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF----LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFI 393 (459)
T ss_pred hhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh----ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHH
Confidence 8999999999999876665544 444444444432 22346677888888877777788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccC
Q 008070 303 YSGMYLGSVTGLAVSPILIQKFG 325 (579)
Q Consensus 303 ~~~~~lG~~lgp~i~~~l~~~~g 325 (579)
+...++|..+.|++++.+.+.-|
T Consensus 394 qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 394 QSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHHhhhhhHHhhhhheeecCCC
Confidence 99999999999999999998644
No 245
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.22 E-value=0.0001 Score=72.83 Aligned_cols=155 Identities=16% Similarity=0.205 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccch
Q 008070 406 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT 485 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (579)
.+...++.+-++ +|++...+|++.++..++..+.+++..++.+|+|..+.+. .++.++..+..+-.. . .
T Consensus 30 svgPLL~~Ir~~-~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~-------~~Llli~~G~~iR~~--~-~ 98 (395)
T COG2807 30 SVGPLLDEIRQD-LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLF-------LALLLIAAGILIRSL--G-G 98 (395)
T ss_pred hhhhhHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHH-------HHHHHHHHHHHHHhc--c-c
Confidence 333444544444 8999999999999999999999999999999999986432 222233222222211 1 2
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHH
Q 008070 486 PAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-SWDDVFKVAVVLYIIG 564 (579)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~-g~~~~~~~~~~~~~l~ 564 (579)
....+....+.+.........+....++-.|++.+..+|++.+..++++++++.+.-.+.++. ||+....+.+...+++
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allA 178 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLA 178 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHH
Confidence 233333333444444455555556666668889999999999999999999999999999886 8999999999999999
Q ss_pred HHHHHHh
Q 008070 565 TLVWNLF 571 (579)
Q Consensus 565 ~~~~~~~ 571 (579)
.++++..
T Consensus 179 l~~WlPq 185 (395)
T COG2807 179 LLIWLPQ 185 (395)
T ss_pred HHHHhhh
Confidence 8888776
No 246
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.21 E-value=1.5e-05 Score=84.44 Aligned_cols=149 Identities=13% Similarity=0.106 Sum_probs=103.9
Q ss_pred HhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHH
Q 008070 417 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVL-CMAC 495 (579)
Q Consensus 417 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 495 (579)
+..++...+.+.+.+++.++.+++.+..+.+.||+...+ .+...+++...+..+... ..+.+..++ -+++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~--------~l~~~~~~w~~~~~~~~~-~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK--------GLSVSGILWGLFGFLTAA-VHSFPGLIALRFLL 144 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH--------HHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 446777888999999999999999999999999998432 222222222222212222 233344444 4444
Q ss_pred HhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHHHH
Q 008070 496 SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ------RGSWDDVFKVAVVLYIIGTLVWN 569 (579)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~------~~g~~~~~~~~~~~~~l~~~~~~ 569 (579)
|.+-....+........-..++++|..+|+.++...+|+++|++++..+.. ..||++.|++-+++.++..++.+
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 444444444444445555777999999999999999999999999988753 37999999999999888777666
Q ss_pred HhhcC
Q 008070 570 LFATG 574 (579)
Q Consensus 570 ~~~~~ 574 (579)
++.+.
T Consensus 225 ~~lp~ 229 (495)
T KOG2533|consen 225 FFLPD 229 (495)
T ss_pred EEecC
Confidence 55443
No 247
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.18 E-value=0.0055 Score=64.93 Aligned_cols=229 Identities=10% Similarity=0.035 Sum_probs=135.1
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhh--hc---c------------------------CHHHHHHHHHHHHhh
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA--AR---I------------------------GLPFLLIMRAFMGIG 274 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a--~~---~------------------------~~~~ll~~r~l~Gig 274 (579)
.+..++++++++.+++-+....+.....++++. |. . +.|.+.+..++.-+-
T Consensus 77 ~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElw 156 (491)
T PF03219_consen 77 ILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELW 156 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999998777666666655555442 10 0 012222333333333
Q ss_pred hhchhh-HHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc---------ccCcchHHHHh----hHHHHHH
Q 008070 275 EGVAMP-AMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ---------KFGWPSVFYSF----GSLGSIW 340 (579)
Q Consensus 275 ~g~~~~-~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~---------~~gwr~~f~i~----~~~~li~ 340 (579)
...... ....+..|.++.+|-.|..+++..+.++|.+++..+..++.+ ...|...+... .+.+++.
T Consensus 157 gsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i 236 (491)
T PF03219_consen 157 GSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVI 236 (491)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHH
Confidence 333333 457888999999999999999999999999999998888877 12354433222 1222222
Q ss_pred HHHHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 008070 341 FALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLK 420 (579)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g 420 (579)
..+.....+...+++... +... .+.....+..-...++.++++|.+..+++...+++.....+....-..+++.+-
T Consensus 237 ~~~~~~~~~~vl~~~~~~-~~~~---~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~ 312 (491)
T PF03219_consen 237 ILLYRYMNKNVLTDPRFY-PSAK---KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP 312 (491)
T ss_pred HHHHHHHHHHccCccccc-hhhh---cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 222222221111111110 0000 001111122223567888899999999999888888888887777667776554
Q ss_pred CChhh---hhHHhHHHHHHHHHHHHHHHHHhhhhhccCc
Q 008070 421 FNLTE---SGLFCVLPWLTMAVFANMGGWIADTLVSKGL 456 (579)
Q Consensus 421 ~s~~~---~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~ 456 (579)
-+.+. .|-.....++..++..++++.+.+|+|-+..
T Consensus 313 ~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~ 351 (491)
T PF03219_consen 313 DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTA 351 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 33222 2344455566666666778888888886643
No 248
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.16 E-value=5.6e-05 Score=72.48 Aligned_cols=161 Identities=12% Similarity=0.167 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh-
Q 008070 403 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS- 481 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 481 (579)
..|.+..|.|.. ++.+|++..+...+.....++..+| ++.|.+.|++|.+..+.++. .. .+++.........
T Consensus 17 t~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~--~~---~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGA--VL---GFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHH--HH---HHHHHHHHHHHHhC
Confidence 445555566655 4559999999999999989988775 88999999999885544332 11 1111111111111
Q ss_pred cc--chhHHHHHHHHHHhhhhhhhh-hhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 008070 482 HV--RTPAMAVLCMACSQGSDAFSQ-SGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV 558 (579)
Q Consensus 482 ~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~ 558 (579)
.. ...+...+...+++....... .........+ |++||++.|+.-....+++++-..+...+.+. +....+.+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la 167 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLA 167 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHH
Confidence 11 233333333334433333332 3333344444 67899999999999999999988888877776 3333333433
Q ss_pred HH-HHHHHHHHHHhh
Q 008070 559 VL-YIIGTLVWNLFA 572 (579)
Q Consensus 559 ~~-~~l~~~~~~~~~ 572 (579)
.. .+++.+...+++
T Consensus 168 ~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 168 VLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHHHhhhee
Confidence 33 344444444443
No 249
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.16 E-value=1.4e-05 Score=84.33 Aligned_cols=171 Identities=13% Similarity=0.097 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhh----hhhccCcchHHHHHHHHHHHHHHH
Q 008070 398 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD----TLVSKGLSITAVRKIMQSIGFLGP 473 (579)
Q Consensus 398 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~d----r~g~~~~~~~~~~~~~~~~~~~~~ 473 (579)
+...........+++.|+.+..|+++...|++..+.-+..++..++.|.++| |+||||..... +......
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~------g~i~~~~ 84 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILI------GAILLAL 84 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeeh------hhHHHHH
Confidence 4445555566678889999989999999999999999999999999999999 78988865421 1111111
Q ss_pred HHHHHHhh-c-----cchhHHHHHHHHHHhhhhhhhhhhhhhhcccc-C-CCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 474 AFFLTQLS-H-----VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDI-G-PRYAGVLLGLSNTAGVLAGVFGTAATGYIL 545 (579)
Q Consensus 474 ~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~ 545 (579)
.+.++... . .....+..+...+.............+...+. + +++|.+..+.......+|..+...+.+.+.
T Consensus 85 ~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 85 SFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred HHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 11111111 1 01112222222222333333344434433333 3 478999999998888888887777777777
Q ss_pred hcC-------ChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 546 QRG-------SWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 546 ~~~-------g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
+.. +|.....+.+++.+++.++..+..|+
T Consensus 165 ~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 165 SWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 542 57777777777777776666655444
No 250
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=2.8e-05 Score=84.36 Aligned_cols=141 Identities=18% Similarity=0.119 Sum_probs=102.2
Q ss_pred hCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHh
Q 008070 419 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQ 497 (579)
Q Consensus 419 ~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 497 (579)
...+.....+..++..++..+|.++.|.++||+|||+++..+ +++..+.-.......+.....++ ++.+.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~---------~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVS---------LLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHH---------HHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 456777788888999999999999999999999999755432 22222222222233444444444 44555
Q ss_pred hhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 498 GSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
+..+..........+.++|++|+.+..+ ......++.+++...+++.. +|++.+++..+..++.++++++.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLP 254 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHcc
Confidence 5555555555556777899999999999 88888899999999999988 89999999888888776664443
No 251
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.13 E-value=0.0013 Score=68.02 Aligned_cols=278 Identities=13% Similarity=0.013 Sum_probs=144.8
Q ss_pred HHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-----c--------cC---cch
Q 008070 265 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-----K--------FG---WPS 328 (579)
Q Consensus 265 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~-----~--------~g---wr~ 328 (579)
.+.-++.-+-.+....+...+.-.+..+++++.|..-...+.++|..++..+--.+-+ . .| -..
T Consensus 122 t~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~ 201 (544)
T PF13000_consen 122 TWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSG 201 (544)
T ss_pred HHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHH
Confidence 3444445555566777888888888888888888887777777777776655433322 0 01 111
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCCCCCChhh--c---HHH--HhhhhcCCcccc---ccc----c---hhHHHHhhchHHH
Q 008070 329 VFYSFGSLGSIWFALWLKKAYSSPKEDPEL--R---AEE--KRHILGGSISKE---AVS----V---IPWKLILSKAPVW 391 (579)
Q Consensus 329 ~f~i~~~~~li~~~l~~~~~~~~~~~~~~~--~---~~~--~~~~~~~~~~~~---~~~----~---~~~~~l~~~~~~~ 391 (579)
-..+.|.+.++..++..++.+|.|..+... + ..+ .++......+.+ ... . ..+..+++-|.+.
T Consensus 202 yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~ 281 (544)
T PF13000_consen 202 YLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQ 281 (544)
T ss_pred HHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHH
Confidence 123344455555555566666654322100 0 000 000000000000 001 1 1233456778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhh--ccCc-------------
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV--SKGL------------- 456 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g--~~~~------------- 456 (579)
.+++.....-.++.........=+.+ .|++.++.+++..+. +...++.|+++.|+. ++.+
T Consensus 282 ~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~----~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~ 356 (544)
T PF13000_consen 282 TLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLID----FPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRA 356 (544)
T ss_pred HHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHh----hhHHHHHHHHhhhhhcCCCccccccccccccccc
Confidence 88888888888877777777777777 799999988765443 344444444444442 2211
Q ss_pred ---ch--HH----HHHHHHHHH-HHHHHHH-HH---Hhhc---cc--hhHHHHHHHHHHhhhhhhhhhhhhhh-ccccCC
Q 008070 457 ---SI--TA----VRKIMQSIG-FLGPAFF-LT---QLSH---VR--TPAMAVLCMACSQGSDAFSQSGLYSN-HQDIGP 516 (579)
Q Consensus 457 ---~~--~~----~~~~~~~~~-~~~~~~~-~~---~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 516 (579)
.. .+ ....+.+.. =++.++. .. .++. .+ .+.++++...+..+..........+. ....+|
T Consensus 357 ~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP 436 (544)
T PF13000_consen 357 NKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDP 436 (544)
T ss_pred cchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 00 00 011111110 0111111 00 1110 01 11222233334444444444444443 344678
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 517 RYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 517 ~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
..-|+.+.+.|++.++|+-.-..+.=++.|.
T Consensus 437 ~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 437 AIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred ccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 8999999999999999998888887777774
No 252
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.07 E-value=0.001 Score=66.29 Aligned_cols=147 Identities=12% Similarity=0.080 Sum_probs=91.1
Q ss_pred hhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 008070 418 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQ 497 (579)
Q Consensus 418 ~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (579)
.+|++..+++.++....+.+++...+.|.++||+|||+.- ++.++.-.+.. +.. ..+....+++.=++++
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c------l~~cily~~sc---l~k-~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC------LLFCILYSLSC---LTK-HSSNYPVLLLGRVLGG 132 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH------HHHHHHHHHHH---HHH-hccccHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999632 11122211111 111 2334444444444555
Q ss_pred hhhhhhhhhhhhh------ccccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHH
Q 008070 498 GSDAFSQSGLYSN------HQDIGPRYAGVLLGLSNT-AGVLAGVFGTAATGYILQRGS--WDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 498 ~~~~~~~~~~~~~------~~~~~~~~~g~~~g~~~~-~~~lg~~ig~~l~g~l~~~~g--~~~~~~~~~~~~~l~~~~~ 568 (579)
............. ....|++..+..++...+ .+.+-.+++..++-.+.+..+ ....|....++.+++.++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 5545444443331 123455556676766653 344455556666666666644 4778888888888877766
Q ss_pred HHhhcC
Q 008070 569 NLFATG 574 (579)
Q Consensus 569 ~~~~~~ 574 (579)
....++
T Consensus 213 ~~~W~E 218 (354)
T PF05631_consen 213 LKTWPE 218 (354)
T ss_pred Hhcccc
Confidence 554443
No 253
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.02 E-value=0.0002 Score=74.43 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh----hccCcchHHHHHHHH
Q 008070 391 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL----VSKGLSITAVRKIMQ 466 (579)
Q Consensus 391 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~----g~~~~~~~~~~~~~~ 466 (579)
.......+...+.......|+..|+.++.|+++..+|.++.+.=+.-++.-++.|.++||. ||+|..+ ...
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~l-----L~g 89 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWL-----LWG 89 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHH-----HHH
Confidence 3445556666777778888999999999999999999999999999999999999999974 5555432 111
Q ss_pred HHHHHHHHHHHHHhhc----cchhHHHHHHHHHHhhhhhhhhhhhhhhccc--cCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQLSH----VRTPAMAVLCMACSQGSDAFSQSGLYSNHQD--IGPRYAGVLLGLSNTAGVLAGVFGTAA 540 (579)
Q Consensus 467 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~g~~~~~~~lg~~ig~~l 540 (579)
.+.+.+...+...... ....+..+..++++.+...... +..+...+ -.|++|.+..+.-..+..+|..+...+
T Consensus 90 ~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vni-Py~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~ 168 (467)
T COG2211 90 AIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNI-PYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVL 168 (467)
T ss_pred hHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeC-chhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222222222221 2223333333333333333222 22222222 246899999999999999998888877
Q ss_pred HHHHHhc-------CChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 541 TGYILQR-------GSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 541 ~g~l~~~-------~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
.+.+... .||+....+.+++.++..++.++--+
T Consensus 169 ~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ 208 (467)
T COG2211 169 FPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVK 208 (467)
T ss_pred HHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777654 35666666666666555555444433
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.99 E-value=9.1e-05 Score=65.57 Aligned_cols=106 Identities=11% Similarity=0.101 Sum_probs=89.0
Q ss_pred HHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCc
Q 008070 213 FSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV 292 (579)
Q Consensus 213 ~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~ 292 (579)
++.+....+..++.+.+.+++|.|+.+++|.+.+.+-.+.. +-+ +.+.++...++.|++.+..+++...++.+..++
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 33444455556778889999999999999999988666554 445 688899999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008070 293 SERSRSLAFVYSGMYLGSVTGLAVSPILI 321 (579)
Q Consensus 293 ~~r~~~~g~~~~~~~lG~~lgp~i~~~l~ 321 (579)
+++++..+++......+.++|.++.-.+.
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888766553
No 255
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.94 E-value=0.00017 Score=79.20 Aligned_cols=169 Identities=14% Similarity=0.047 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-hccCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 008070 403 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIMQSIGFLGPAFFLTQLS 481 (579)
Q Consensus 403 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (579)
.+|++...+..|+.+.+|++...+..++..+....-+..+++|+++|++ |+++.+..+. ++..++.++..+......
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~--ii~~lG~~llai~a~~~~ 79 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLS--IVYVVGHALLSFGAIPSS 79 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHHHHHHHHhccCccc
Confidence 3566677788888888999999888888888877888888999999975 6665443322 111122211111000000
Q ss_pred c-cchhHHHHHHHHHHhhhhhhhhhhhhhhc-cccCC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------C
Q 008070 482 H-VRTPAMAVLCMACSQGSDAFSQSGLYSNH-QDIGP---RYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-------S 549 (579)
Q Consensus 482 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~-------g 549 (579)
. .......++.+.+..++.+..-+...... +...+ +.+-..+.++....++|+.+++.+.+++.+.. +
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~ 159 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC 159 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc
Confidence 0 01111122222222223333333333322 22333 24677888888999999999999999987542 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 550 WDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 550 ~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
|..+|.+.+++++++.+++....+
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999998888877765543
No 256
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.88 E-value=0.0001 Score=76.25 Aligned_cols=111 Identities=20% Similarity=0.290 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-------CHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcC---chhHHHHHHHHHH
Q 008070 237 PVLGFGVIWWSVATVLTPVAARI-------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS---ERSRSLAFVYSGM 306 (579)
Q Consensus 237 ~~l~~~~~~~~~~~ll~~~a~~~-------~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~---~r~~~~g~~~~~~ 306 (579)
++++++.+++.+|.++..++... +.+.++++-++.++|.|+.-+...++++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788899999998885444211 1256888899999999999999999999999765 4677888999999
Q ss_pred HHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhh
Q 008070 307 YLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 347 (579)
Q Consensus 307 ~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~ 347 (579)
++|..++..+.+++-+++||.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888777766655443
No 257
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.85 E-value=0.00028 Score=76.35 Aligned_cols=134 Identities=16% Similarity=0.110 Sum_probs=86.6
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHhhhhhhh
Q 008070 425 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFS 503 (579)
Q Consensus 425 ~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 503 (579)
+.+++.+...++..++.++.|+++|++|||+.+..+. .+...+..+... ..+...+.+. ++.+.+.+...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~-------~~~~iG~ii~~~--a~~~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAV-------VLFLIGAIIIAL--APSWYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-------HHHHHHHHHHHH--hhhHHHHHHHHHHhccchhhhh
Confidence 3489999999999999999999999999997544322 111111111111 1233333333 33444443333
Q ss_pred hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHH
Q 008070 504 QSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG--SWDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 504 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~--g~~~~~~~~~~~~~l~~~~~ 568 (579)
........+..|++.||...+..+....+|..++ .+.+...+.. +|+..+.+..+.+++..+..
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~ 226 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGM 226 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHH
Confidence 3333334444566899999999999999888887 6666666553 89988888777777666663
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.84 E-value=0.00011 Score=56.73 Aligned_cols=65 Identities=18% Similarity=0.236 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcc
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 457 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 457 (579)
.+-...++.+.+...+..++|.|+++ .|+++.++|.+.++..+..+++.+++|.++||+++++..
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 34456677788888899999999998 799999999999999999999999999999999998643
No 259
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0058 Score=66.15 Aligned_cols=123 Identities=17% Similarity=0.223 Sum_probs=94.2
Q ss_pred hhhhhhhhhc-CCcHHHHHHHHHHHHHHHHHHhhhcc--------------------C---HHHHHHHHHHHHhhhhchh
Q 008070 224 IVGGIWADKF-GGKPVLGFGVIWWSVATVLTPVAARI--------------------G---LPFLLIMRAFMGIGEGVAM 279 (579)
Q Consensus 224 ~~~G~l~Dr~-Grr~~l~~~~~~~~~~~ll~~~a~~~--------------------~---~~~ll~~r~l~Gig~g~~~ 279 (579)
++++.++|-| ||-+++.++.++..++..+..++... + ...+....-+..+|.|+.-
T Consensus 91 l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r 170 (571)
T KOG1237|consen 91 LLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIR 170 (571)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCC
Confidence 7889999976 88889999998888886554332100 0 1345666677788999999
Q ss_pred hHHHHHHhcccC---cC---chhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHh
Q 008070 280 PAMNNMLSKWIP---VS---ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 346 (579)
Q Consensus 280 ~~~~~~i~~~~~---~~---~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~ 346 (579)
+...++-+|-++ ++ .+...+.++....++|.+++..+..++-++.+|.+.|.+..+..++.+++++.
T Consensus 171 ~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 171 PCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred CcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 999999999997 22 23367889999999999999999888888899999999888777666555443
No 260
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.00093 Score=70.33 Aligned_cols=130 Identities=21% Similarity=0.132 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 008070 434 WLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQD 513 (579)
Q Consensus 434 ~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (579)
++..++.+.+.|.++||+|||..+.... .+.++....+.... +| .++...+.++...............
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~------~~~~l~~~~~~~~~----~~-~~~~~~l~g~~~~~~s~~~a~vadi 140 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPL------FGTILPALCLLFQG----YW-FFLLLGLSGGFSAIFSVGFAYVADI 140 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHH------HHHHHhHHHHHHHH----HH-Hhhhcccccchhhhhhhhhhheeec
Confidence 5677888889999999999996543221 22222222221111 22 2223333444444444444444444
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 514 IGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 514 ~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
...+.|...+|+.+.....+..++|.+++.+.+..|+..+|.+..+..++..+...+..++
T Consensus 141 s~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 141 SSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred cchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 5668999999999999999999999999999999999999999999988888877666544
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.67 E-value=0.016 Score=60.88 Aligned_cols=98 Identities=12% Similarity=0.002 Sum_probs=53.6
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHH-Hh----hh-ccCHHHHHHHHHHHHhhhhchhhHHHHHHh
Q 008070 214 SAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLT-PV----AA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLS 287 (579)
Q Consensus 214 ~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~-~~----a~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~ 287 (579)
...+...+..+..-.+..|+..|.=+..++++..+..++. .+ .+ ...++..++.-++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 3344444444555566666665333333433222222221 11 11 013556677778889999888888887766
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHH
Q 008070 288 KWIPVSERSRSLAFVYSGMYLGSVTGLAV 316 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~~~~~~lG~~lgp~i 316 (579)
.+|+ +.++.+..+.+++++++.++
T Consensus 133 -~fp~----~~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 133 -VFPS----TYSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred -cCCH----HHHHHHHhcchhHHHHHHHH
Confidence 4553 34566666677776665554
No 262
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.63 E-value=0.0022 Score=65.08 Aligned_cols=150 Identities=16% Similarity=0.032 Sum_probs=97.3
Q ss_pred HHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhh-----ccCcchHHHHHHHHHHHHHHHHHHHHHhhc-------
Q 008070 415 YNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV-----SKGLSITAVRKIMQSIGFLGPAFFLTQLSH------- 482 (579)
Q Consensus 415 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 482 (579)
+..+++++....+.+.++..+.. ..++..|+.+|+.+ ||..+++... ...+.+..+..........
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~-~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGT-LLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHH-HHHHHHHHHHHHHHHHHccccccccc
Confidence 34458888888888888877766 46899999999998 7766555432 3333333333333333333
Q ss_pred cchhH---HHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 008070 483 VRTPA---MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVV 559 (579)
Q Consensus 483 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~ 559 (579)
....+ ..+.+...+.+......+......+..++++|+++.++...+.-+|.+++..+.|.+.+.++.....-+...
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 12222 122223333333333444444456667889999999999999999999999999999998887666655554
Q ss_pred HHHHHHH
Q 008070 560 LYIIGTL 566 (579)
Q Consensus 560 ~~~l~~~ 566 (579)
..++..+
T Consensus 164 ~a~i~~~ 170 (403)
T PF03209_consen 164 VALIALL 170 (403)
T ss_pred HHHHHHH
Confidence 4444433
No 263
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.61 E-value=1.8e-06 Score=91.76 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=94.4
Q ss_pred hhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHH----hhhccC---HHHHHHHHHHHHhhhh-chhhHHHHHHhcccCc
Q 008070 221 MDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTP----VAARIG---LPFLLIMRAFMGIGEG-VAMPAMNNMLSKWIPV 292 (579)
Q Consensus 221 l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~----~a~~~~---~~~ll~~r~l~Gig~g-~~~~~~~~~i~~~~~~ 292 (579)
++.++...+.||+|||++++.+.++.+++.+.++ ...+.+ -...++.-.+..++.+ ...+....+.+|.+|.
T Consensus 301 ~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt 380 (451)
T PF00083_consen 301 LGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT 380 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccc
Confidence 3446777999999999999999999888877764 111100 0111222222222222 2345666888999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCC
Q 008070 293 SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKED 355 (579)
Q Consensus 293 ~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~ 355 (579)
+.|+.+.++......++.++++.+...+.+..+-...+++.+.+.++..+..+++.||+..+.
T Consensus 381 ~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 381 KVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 999999999999999999999988888877666455666677777777777778888776544
No 264
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.42 E-value=0.0029 Score=60.06 Aligned_cols=101 Identities=18% Similarity=0.145 Sum_probs=56.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHh---h--cccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhhhh
Q 008070 293 SERSRSLAFVYSGMYLGSVTGLAVSPIL---I--QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 367 (579)
Q Consensus 293 ~~r~~~~g~~~~~~~lG~~lgp~i~~~l---~--~~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (579)
++|+....+...+.++|.++..+.--.- . -.-.|++++.+.+++.++.+++...+-.+-....+. +++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~--- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE--- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc---
Confidence 4566666677777888887654432111 1 123599999999888877766666553221111111 011000
Q ss_pred cCCcccccccchhHHHHhhchHHHHHHHHHHHHH
Q 008070 368 GGSISKEAVSVIPWKLILSKAPVWALIISHFCHN 401 (579)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 401 (579)
+...........++|++..|...+.+....
T Consensus 78 ----~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 ----NSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----cccccccchHHHHHccchHHHHHHHHHHHh
Confidence 001112245778899999888776665543
No 265
>PRK03612 spermidine synthase; Provisional
Probab=97.42 E-value=0.012 Score=63.19 Aligned_cols=166 Identities=14% Similarity=0.091 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHH-
Q 008070 394 IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLG- 472 (579)
Q Consensus 394 ~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~- 472 (579)
.+..++..++...+.....-.+...+|.+....+.+.+++.++..+|+.+++++.++..++.. . .-+.++++.
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~-----~e~~i~l~~~ 93 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-A-----VELLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-H-----HHHHHHHHHH
Confidence 344445555555666666666666688888888999999999999999888877643322211 1 111111111
Q ss_pred --HHHHHHHhhccchh-H-HHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Q 008070 473 --PAFFLTQLSHVRTP-A-MAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-R 547 (579)
Q Consensus 473 --~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~-~ 547 (579)
..+........... . ...+.+..+ +..+...+...........+..|...|-......+|+++|+++.+++.- .
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIG-LLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 11111111110011 1 111111222 2222223333333333223345777888888999999999999998876 5
Q ss_pred CChHHHHHHHHHHHHHHHH
Q 008070 548 GSWDDVFKVAVVLYIIGTL 566 (579)
Q Consensus 548 ~g~~~~~~~~~~~~~l~~~ 566 (579)
.|.....++.+.+.++..+
T Consensus 173 lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 173 LGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 7776665555555544443
No 266
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.40 E-value=0.00016 Score=73.49 Aligned_cols=129 Identities=11% Similarity=0.015 Sum_probs=96.4
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhcc--CHHHHHHHHHHHHhhhh-chhhHHHHHHhcccCcCchhHHHH
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI--GLPFLLIMRAFMGIGEG-VAMPAMNNMLSKWIPVSERSRSLA 300 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~--~~~~ll~~r~l~Gig~g-~~~~~~~~~i~~~~~~~~r~~~~g 300 (579)
.+...++|+.|||++.+.|.+++.+..+..+...+. +-..+++...+..+... +-......+-+|.+|.+-|+..-|
T Consensus 366 w~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hG 445 (538)
T KOG0252|consen 366 WFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHG 445 (538)
T ss_pred eEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhh
Confidence 566778999999999999999999999998887620 11222333333332221 122344456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-----ccCcchHHHHhhHHHHHHHHHHHhhhcCCCC
Q 008070 301 FVYSGMYLGSVTGLAVSPILIQ-----KFGWPSVFYSFGSLGSIWFALWLKKAYSSPK 353 (579)
Q Consensus 301 ~~~~~~~lG~~lgp~i~~~l~~-----~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~ 353 (579)
+.....-.|+++|...-.++.+ ..+.++++++.+.+.++..+..++++ |+..
T Consensus 446 IsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~ 502 (538)
T KOG0252|consen 446 ISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP-ETKG 502 (538)
T ss_pred HHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee-cccc
Confidence 9999999999999999999988 78999999999988877666665554 4443
No 267
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.36 E-value=0.25 Score=51.38 Aligned_cols=228 Identities=11% Similarity=0.020 Sum_probs=133.1
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhc-------------------c-----------CHHHHHHHHHHHHh
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR-------------------I-----------GLPFLLIMRAFMGI 273 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~-------------------~-----------~~~~ll~~r~l~Gi 273 (579)
++.+++.+++.+.+++-+-...+....+++++.-- . +.|...+..++.-+
T Consensus 80 ~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aEL 159 (509)
T COG3202 80 IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAEL 159 (509)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHH
Confidence 67788999999999987777777777777665310 0 01333333334334
Q ss_pred hhhchhh-HHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-C---------cchHHHHhhHHHHHHHH
Q 008070 274 GEGVAMP-AMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-G---------WPSVFYSFGSLGSIWFA 342 (579)
Q Consensus 274 g~g~~~~-~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~-g---------wr~~f~i~~~~~li~~~ 342 (579)
-.+.... .......|.+..+|-.|..+++..+.+++.+++..+..++..+. . .+..+.+.++.++++.+
T Consensus 160 WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~ 239 (509)
T COG3202 160 WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAIL 239 (509)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3343333 55677888888889999999999999999999998888887622 1 33344445555455555
Q ss_pred HHHhhhcCCCCCChhhcHHHHhhhhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 008070 343 LWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN 422 (579)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s 422 (579)
+..+.-+...+.+.-.....++ ++....+-.-...++.+.+.|-++.+++...+++.+...+....-.-.++.+-..
T Consensus 240 l~~~~~r~il~~~~f~~~~~~k---k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~ 316 (509)
T COG3202 240 LYRYINRNVLTDPLFYLRAKKK---KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTT 316 (509)
T ss_pred HHHHHHhhcccCcchhHHHhcc---cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCCh
Confidence 4444433332222211000000 0001111122345777888999998888888888888777665444444433333
Q ss_pred hhhh---hHHhHHHHHH-HHHHHHHHHHHhhhhhcc
Q 008070 423 LTES---GLFCVLPWLT-MAVFANMGGWIADTLVSK 454 (579)
Q Consensus 423 ~~~~---g~~~~~~~~~-~~ig~~~~g~l~dr~g~~ 454 (579)
.+.. |.+....++. .++...+++-+.+|.|-.
T Consensus 317 ~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 317 NEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 3333 3333344444 334445667777777654
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.35 E-value=0.004 Score=65.62 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhh----ccCcchHHHHHHHHHHHHHHHHHHHHHhhc-c
Q 008070 409 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV----SKGLSITAVRKIMQSIGFLGPAFFLTQLSH-V 483 (579)
Q Consensus 409 ~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 483 (579)
.-...|+++.+|+++.+...+..+..+... ..++.|.++|-+. ||+..... ...++. +..+.+..... .
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i----~~~~~~-~~~~~~~~~~~~~ 83 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMII----GWLLGA-VSALVLALLPASE 83 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHH----HHHHHH-HHHHHHHhccccc
Confidence 344557777799999998887777666554 4568899999873 44432211 111111 11111111111 1
Q ss_pred chhHHHHHHHHHHhhhhhhhhhhhhh----hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 008070 484 RTPAMAVLCMACSQGSDAFSQSGLYS----NHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVV 559 (579)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~ 559 (579)
.......+++.+........-...-. ..+. .|+.+|...+.......+|+.++..+.|.+.+..+++..|.+.++
T Consensus 84 ~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~-~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~ 162 (433)
T PF03092_consen 84 SSAAIAVVLLFLASFGYAFADVAADALVVELARR-EPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAA 162 (433)
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhc-CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHH
Confidence 22222222222222222222222221 2222 333488999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHHHhhc
Q 008070 560 LYIIGTLVWNLFAT 573 (579)
Q Consensus 560 ~~~l~~~~~~~~~~ 573 (579)
+.++..+..+++.+
T Consensus 163 ~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 163 LPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHHHhhh
Confidence 77766555555444
No 269
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.29 E-value=0.0022 Score=61.85 Aligned_cols=311 Identities=11% Similarity=0.071 Sum_probs=156.1
Q ss_pred HHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCch
Q 008070 216 FLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 295 (579)
Q Consensus 216 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r 295 (579)
.+...+..+.+..+.||+.--.=+.+..++.+.+.++.+++. +.++-+.+-.+..++.|.......++-+.+-
T Consensus 72 ilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss~Y~----- 144 (409)
T KOG3880|consen 72 ILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSSRYP----- 144 (409)
T ss_pred hhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhccCC-----
Confidence 334444456666778887554444556667788888899998 7888888888888888877666666544432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc--ccCcchHHHHhhHHHHHHHHHHHhhhcCCCCCCh-hhcHHHH---hhhhc-
Q 008070 296 SRSLAFVYSGMYLGSVTGLAVSPILIQ--KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP-ELRAEEK---RHILG- 368 (579)
Q Consensus 296 ~~~~g~~~~~~~lG~~lgp~i~~~l~~--~~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~-~~~~~~~---~~~~~- 368 (579)
....+.+..+.+.++++|..--..+.+ .++-|.+.++...+.++.+...++.+++++.... ...+... +....
T Consensus 145 ~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~~~~~~~~~ 224 (409)
T KOG3880|consen 145 SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEIIPSQYLPF 224 (409)
T ss_pred CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccceeccCCCCcc
Confidence 234555666677777777766555655 3567888888877777766666666655433221 1110000 00000
Q ss_pred CCcccc--cccchhHHH-HhhchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-hhCCCh---hhhhHHhHHHHHHHHHH
Q 008070 369 GSISKE--AVSVIPWKL-ILSKAPVWALIISHFCHNWGTFILLT-WMPTYYNQ-VLKFNL---TESGLFCVLPWLTMAVF 440 (579)
Q Consensus 369 ~~~~~~--~~~~~~~~~-l~~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~~-~~g~s~---~~~g~~~~~~~~~~~ig 440 (579)
...+.+ .......++ +.+-+++...++-.+..+++.|.++. ..+..+-+ ..|++. .+.-++.....++..+.
T Consensus 225 ~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiS 304 (409)
T KOG3880|consen 225 EAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFIS 304 (409)
T ss_pred cccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEE
Confidence 000011 111112222 22223333355555555556555544 23332221 123322 22334444444433322
Q ss_pred HHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH-HhhhhhhhhhhhhhhccccCCCch
Q 008070 441 ANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMAC-SQGSDAFSQSGLYSNHQDIGPRYA 519 (579)
Q Consensus 441 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 519 (579)
+- +-++-+-+.+. .. .++-++-+ +..+.-......+..+.+.++.+. |..++.........+.++.+|+.|
T Consensus 305 RS-----S~~~~~~p~l~-~L-ailQ~vNl-~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~r 376 (409)
T KOG3880|consen 305 RS-----SINLFTMPYLW-LL-AILQFVNL-LFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVR 376 (409)
T ss_pred ec-----cceEEechHHH-HH-HHHHHHHH-HHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHH
Confidence 21 11111111110 00 01111111 111111122233444444444433 334444445555567778899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 008070 520 GVLLGLSNTAGVLAGVFGTAAT 541 (579)
Q Consensus 520 g~~~g~~~~~~~lg~~ig~~l~ 541 (579)
--+++.....-.+|..++..++
T Consensus 377 Efamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 377 EFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHhHhhheecchhhHHHHHHHh
Confidence 9999988777777766665554
No 270
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.12 E-value=0.096 Score=54.66 Aligned_cols=182 Identities=12% Similarity=0.080 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
..+.+.+..++..++.-.+.+..+.++.+.+.-+-.-.+.+...-.+..++.....|...||..|.+........=-..+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 44667788888888888889999999999766565666666667777788888889999999998886655432111122
Q ss_pred HHHHHHHHHHHhhccc----hh-H-HHHHHHHHHhhhhhhhhhhhhhhc-c-------ccCCCchhHHHHHHHHHHHHHH
Q 008070 469 GFLGPAFFLTQLSHVR----TP-A-MAVLCMACSQGSDAFSQSGLYSNH-Q-------DIGPRYAGVLLGLSNTAGVLAG 534 (579)
Q Consensus 469 ~~~~~~~~~~~~~~~~----~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~g~~~g~~~~~~~lg~ 534 (579)
+.....+......... .. . ...+...+.+...-.......... . +-.++.....++.+.-+-.+..
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 2222222221211111 11 1 111111111111111111111111 1 1134556677777777777899
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 008070 535 VFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 535 ~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
.++|.+.|.+.+..++.....+.++..+++..+=++
T Consensus 163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888888888765433
No 271
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.98 E-value=0.011 Score=61.84 Aligned_cols=178 Identities=15% Similarity=0.064 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhc-cCcchHHHHHHHHH
Q 008070 390 VWALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQS 467 (579)
Q Consensus 390 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~-~~~~~~~~~~~~~~ 467 (579)
++...+..++....+..+..-.-.|+++ ..+-+....|++.+...++.++++++.|+...|.+. |+.++.+. ++..
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~--ii~~ 113 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF--LIAI 113 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH--HHHH
Confidence 4445555555555444444444456655 246677889999999999999999999999999885 44443322 2222
Q ss_pred HHHHHHHHHHHHhhccc-hhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 468 IGFLGPAFFLTQLSHVR-TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 468 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
++-+ +.+......+ ..++++++-++.+.+.+.....-........+++|.++++.......+|.++||.+...+..
T Consensus 114 ~g~l---lY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 114 IGNL---LYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHH---HHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 2222 2211111222 33444444333333322222222223333456778888888777777777777766544432
Q ss_pred c-------------CChHHHHHHHHHHHHHHHHHHHHhh
Q 008070 547 R-------------GSWDDVFKVAVVLYIIGTLVWNLFA 572 (579)
Q Consensus 547 ~-------------~g~~~~~~~~~~~~~l~~~~~~~~~ 572 (579)
. .-|...-++.+++.++.+++..+.-
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFF 229 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhe
Confidence 1 1255666777777777666655543
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.92 E-value=0.01 Score=60.67 Aligned_cols=131 Identities=11% Similarity=0.053 Sum_probs=76.3
Q ss_pred HHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 008070 412 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVL 491 (579)
Q Consensus 412 p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (579)
..|.++.|| +...+-++..++.+..+...+.+-|+.||+|-|.....+. ...+++..+=.+..... ..+..+. -
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt--~ln~iGa~Ir~iss~p~-v~~~f~~--~ 141 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT--VLNGIGAWIRLISSLPF-VPPLFRR--P 141 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH--HHHHHHHHHhhhccCcc-ccccchh--h
Confidence 345666677 6667778888888999999999999999999985433221 11122211111111000 0022221 1
Q ss_pred HHHHHhhhhhhhhhhhh-----hhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008070 492 CMACSQGSDAFSQSGLY-----SNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG 548 (579)
Q Consensus 492 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~ 548 (579)
+...+....+...+... ....-+++++|+.+..+..+...+|.+++.++...+..+.
T Consensus 142 l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 142 LTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 12222222222222111 1223368899999999998988999999988888777653
No 273
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.81 E-value=0.092 Score=46.53 Aligned_cols=110 Identities=14% Similarity=0.026 Sum_probs=65.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhhhhh
Q 008070 428 LFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGL 507 (579)
Q Consensus 428 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (579)
.-.++......+..++.+.+.+++|.|+.+ .++.+...+..........+.+.....+.+.+.........
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm---------~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSM---------ILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHH---------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 344556667778888889999999998433 33333333333222233333333444444444433333333
Q ss_pred hhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 508 YSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 508 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
..+.+...++.+++..|+...+...+.++|..+.-.+..
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444556788999999888888888888776655543
No 274
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.58 E-value=0.12 Score=53.13 Aligned_cols=161 Identities=9% Similarity=0.012 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHh-hCCChhhhhHHhHHHH-HHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008070 407 LLTWMPTYYNQV-LKFNLTESGLFCVLPW-LTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 484 (579)
Q Consensus 407 ~~~~~p~~l~~~-~g~s~~~~g~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (579)
...++..|+.+. .|++..+..--..+.+ =..++.-+....+.|.++.|.+++.+ +++.+..-. ++.. ..
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~------~~~~i~t~~-lll~--~~ 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQ------ALSYIITWL-LLLF--GT 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH------HHHHHHHHH-HHHH--HC
Confidence 345778888876 7999888764433333 34445556777889999988644322 122121111 1111 22
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHH
Q 008070 485 TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR--GSWDDVFKVAVVLYI 562 (579)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~--~g~~~~~~~~~~~~~ 562 (579)
.....-+.-++.+.....-..-...+-..+++++--++.+.......+|..++..++-.+... .+|.....+..+...
T Consensus 93 sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~ 172 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVS 172 (412)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 233332222222222222222222334456788878888888888888888888888777763 677778777777777
Q ss_pred HHHHHHHHhhcCcc
Q 008070 563 IGTLVWNLFATGER 576 (579)
Q Consensus 563 l~~~~~~~~~~~~~ 576 (579)
++.++.+++.+.+|
T Consensus 173 ~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 173 LALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHcCCCCc
Confidence 77777777665443
No 275
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.58 E-value=0.2 Score=52.97 Aligned_cols=152 Identities=15% Similarity=0.087 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----ChhhhhHHhHHHHHHHHHH-HHHHHHHhhhhhccCcchHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKF-----NLTESGLFCVLPWLTMAVF-ANMGGWIADTLVSKGLSITAV 461 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~-----s~~~~g~~~~~~~~~~~ig-~~~~g~l~dr~g~~~~~~~~~ 461 (579)
++++...+..|+..+.++.. --++|.++. +.+...++.....+...+. .++.+++++|+++++++....
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 34455555555554444332 234555544 3356677766665655555 788999999999998765432
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc------------------------hhHHHHHHHHHHhhhhhhhhh-hhhhhccc-cC
Q 008070 462 RKIMQSIGFLGPAFFLTQLSHVR------------------------TPAMAVLCMACSQGSDAFSQS-GLYSNHQD-IG 515 (579)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 515 (579)
....... ++.++.+......- ..|...+++...-..+..... ..+....+ ..
T Consensus 82 ~~F~~~f--~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t 159 (472)
T TIGR00769 82 SPFLGFF--ALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITT 159 (472)
T ss_pred HHHHHHH--HHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111111 11111111111000 011222222222222233332 34444444 55
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 516 PRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 546 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~ 546 (579)
+++..+.+++.....++|..+++.+..++.+
T Consensus 160 ~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 160 IDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6888999999999999999999999988873
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.54 E-value=0.2 Score=51.23 Aligned_cols=29 Identities=10% Similarity=0.281 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHHHhcc
Q 008070 261 LPFLLIMRAFMGIGEGVAMPAMNNMLSKW 289 (579)
Q Consensus 261 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 289 (579)
+...++.-.+.+++.+..........++.
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~ 145 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF 145 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC
Confidence 45566777788888887777777766654
No 277
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.20 E-value=0.45 Score=46.39 Aligned_cols=151 Identities=19% Similarity=0.171 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCh--hhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHH
Q 008070 402 WGTFILLTWMPTYYNQVLKFNL--TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ 479 (579)
Q Consensus 402 ~~~~~~~~~~p~~l~~~~g~s~--~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (579)
..........+.+..+ .+.+. ...++......+...++.++.|.+.||+|+|+....+... .....+....
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------~~~~~~~~~~ 88 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL------FLLGTLLLAL 88 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH------HHHHHHHHHh
Confidence 3334444556666666 44444 4678888888888888889999999999888443322110 1111111111
Q ss_pred hhccchhHHHHHHHH-HHhhhhhhhhhhhhhhc-cccCC-CchhHHHHHHHH-HHHHHHHHHHHHHHHHHhc--CChHHH
Q 008070 480 LSHVRTPAMAVLCMA-CSQGSDAFSQSGLYSNH-QDIGP-RYAGVLLGLSNT-AGVLAGVFGTAATGYILQR--GSWDDV 553 (579)
Q Consensus 480 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~~~g~~~g~~~~-~~~lg~~ig~~l~g~l~~~--~g~~~~ 553 (579)
.. ....+....... .+.+.. ...+...... +..++ +.++...+.... ...++..+++.+.+.+... .+|+..
T Consensus 89 ~~-~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 89 AP-NVGLALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred Cc-cchHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 11 112222222222 222222 2333333333 33333 478888888888 5778888888777777664 567775
Q ss_pred HHHHHHHH
Q 008070 554 FKVAVVLY 561 (579)
Q Consensus 554 ~~~~~~~~ 561 (579)
+.......
T Consensus 167 ~~~~~~~~ 174 (338)
T COG0477 167 FLLAALLG 174 (338)
T ss_pred HHHHHHHH
Confidence 55555444
No 278
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.15 E-value=0.46 Score=46.83 Aligned_cols=64 Identities=11% Similarity=0.076 Sum_probs=49.1
Q ss_pred hhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhccc
Q 008070 224 IVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI 290 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~ 290 (579)
++.+.+..++|-|++++++...+......--. + .+..++-...+.|++.+..+..--+++++.-
T Consensus 76 m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~-p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 76 MFMPLLIRFLGTKWTMVLAVFPYALYIAANLE-P--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-h--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 67778999999999999988877665443222 2 4678889999999999988877766666554
No 279
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.30 E-value=0.17 Score=39.51 Aligned_cols=55 Identities=16% Similarity=0.231 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCc
Q 008070 401 NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 456 (579)
Q Consensus 401 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~ 456 (579)
..+-+.+...+|...++ .+++..+.+++.+...++..+|.+...++.++..+++.
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~ 59 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL 59 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 44556677788887777 79999999999999999999999999998887655543
No 280
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.30 E-value=0.38 Score=49.52 Aligned_cols=64 Identities=17% Similarity=0.164 Sum_probs=57.6
Q ss_pred hhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 255 VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 320 (579)
Q Consensus 255 ~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l 320 (579)
+.+ +.|.+++.-+..|+..|..+......+.+-.++++|..++|....+-++|.+++.+++-.+
T Consensus 331 fip--si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 331 FIP--SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred Hhh--HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 445 6788888999999999999999999999999999999999999999999999999887665
No 281
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.22 E-value=0.0044 Score=66.91 Aligned_cols=171 Identities=11% Similarity=0.076 Sum_probs=1.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 008070 402 WGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS 481 (579)
Q Consensus 402 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (579)
....++....-.-+++.++++..++|++.+..-++.++..++..++.+|..|.+++-.+. ++.+++.++.++--....
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~--~~~~~g~~l~~lPhf~~~ 93 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGA--LLMGLGSLLFALPHFLSG 93 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecH--HHHHHHHHHHhccHhhcC
Confidence 333444333333455669999999999999999999999999999998877666654443 444444433322111110
Q ss_pred c---------------------------------------cc----hhHHHHH-HHHHHhhhhhhhhhhhhhhccccCCC
Q 008070 482 H---------------------------------------VR----TPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPR 517 (579)
Q Consensus 482 ~---------------------------------------~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (579)
. .. ..+++++ -++.|.+...........+-+.++++
T Consensus 94 ~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~ 173 (539)
T PF03137_consen 94 PYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK 173 (539)
T ss_dssp ----------------------------------------------------------SSS-------------------
T ss_pred CCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc
Confidence 0 00 0111111 12223333333333333344457788
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHhhcC
Q 008070 518 YAGVLLGLSNTAGVLAGVFGTAATGYILQRG----------------------SWDDVFKVAVVLYIIGTLVWNLFATG 574 (579)
Q Consensus 518 ~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~----------------------g~~~~~~~~~~~~~l~~~~~~~~~~~ 574 (579)
..+...|+..++..+|-++|-.++|.+...+ .|...|++.+++.++..+.++.+.|+
T Consensus 174 ~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 174 NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 8999999999999999988888888766421 25555666777777777766666543
No 282
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.88 E-value=0.35 Score=53.31 Aligned_cols=167 Identities=13% Similarity=0.084 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhh----
Q 008070 406 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS---- 481 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 481 (579)
++....-.-+++.++++..+.|++...+-++..+..++..+...|..|.+++-.+. ++.+++.++.++--....
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~--~~m~lgsll~alPHf~~~~y~~ 191 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGL--VLMGLGSLLFALPHFFSGPYEY 191 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeech--hHHHHHHHHHhChHHhcCcchh
Confidence 44444444556679999999999999999999999999999999988887766554 444444333322100000
Q ss_pred -----------c---------------------------c-ch-hH-HHHHH-HHHHhhhhhhhhhhhhhhccc-cCCCc
Q 008070 482 -----------H---------------------------V-RT-PA-MAVLC-MACSQGSDAFSQSGLYSNHQD-IGPRY 518 (579)
Q Consensus 482 -----------~---------------------------~-~~-~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 518 (579)
. . +. ++ ++++. ++.|.+.. ...+.-..+.++ +.+++
T Consensus 192 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T-pi~tlGisYiDDnvk~~~ 270 (735)
T KOG3626|consen 192 ELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT-PIFTLGISYIDDNVKKKN 270 (735)
T ss_pred hhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC-CCccCCCccccccccccC
Confidence 0 0 00 12 11122 22233332 233333344444 55678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------------ChHHHHHHHHHHHHHHHHHHHHhhcCc
Q 008070 519 AGVLLGLSNTAGVLAGVFGTAATGYILQRG-------------------SWDDVFKVAVVLYIIGTLVWNLFATGE 575 (579)
Q Consensus 519 ~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~-------------------g~~~~~~~~~~~~~l~~~~~~~~~~~~ 575 (579)
....+|+..++..+|-++|-++++++...+ -|...|++++++.++..+.++.+.++.
T Consensus 271 SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 271 SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 899999999999999999998888887531 256667888888888888887776543
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.15 E-value=0.085 Score=54.25 Aligned_cols=154 Identities=11% Similarity=0.024 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh----hhccCcchHHHHH
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT----LVSKGLSITAVRK 463 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr----~g~~~~~~~~~~~ 463 (579)
..+..+....+...+++..=..+++.|+++ .|.+....+.+..+.-+.+.+.+++.|..+|| +||||.++.....
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 344555555666666666667899999999 79999999999888889999999999999995 7888876543221
Q ss_pred HHHHHHHHHHHHH--H--HHhhccch--hHHHHHHHHHHh----hhhhhhhhhhhh-hccccCCCchhH-HHHHHHHHHH
Q 008070 464 IMQSIGFLGPAFF--L--TQLSHVRT--PAMAVLCMACSQ----GSDAFSQSGLYS-NHQDIGPRYAGV-LLGLSNTAGV 531 (579)
Q Consensus 464 ~~~~~~~~~~~~~--~--~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~g~-~~g~~~~~~~ 531 (579)
. ..+++.+.... + .+...... ....+....+++ ..........-+ ......++++-+ +++++.++..
T Consensus 111 ~-i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 L-IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred H-HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHH
Confidence 1 11111111111 0 00001111 112222222222 222222222223 333344444555 8999999999
Q ss_pred HHHHHHHHHHHH
Q 008070 532 LAGVFGTAATGY 543 (579)
Q Consensus 532 lg~~ig~~l~g~ 543 (579)
+|+.+|-.+.++
T Consensus 190 vGnvLGY~~g~y 201 (498)
T KOG0637|consen 190 VGNVLGYALGSY 201 (498)
T ss_pred hcceeeeecccc
Confidence 999888777663
No 284
>PRK03612 spermidine synthase; Provisional
Probab=94.13 E-value=0.88 Score=49.11 Aligned_cols=77 Identities=21% Similarity=0.325 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh-cccCcchHHHHhhHHHHHHHH
Q 008070 265 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI-QKFGWPSVFYSFGSLGSIWFA 342 (579)
Q Consensus 265 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~-~~~gwr~~f~i~~~~~li~~~ 342 (579)
+..-++.++..|+..|....+..+.. .++-++..|.......+|.++|.++.+++. ..+|-..+.++.+.+.+++.+
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 34445667777777777766665433 234567788889999999999999888765 467765555555555544443
No 285
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.02 E-value=1.8 Score=47.19 Aligned_cols=177 Identities=12% Similarity=0.063 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhh-hccCcchHHHHHHHHHHHHH
Q 008070 393 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIMQSIGFL 471 (579)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 471 (579)
.+....+-..+++++..-+-.|+...++.+...+.-.............+++++++|-+ ||.+.+.++. .+..+++.
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s--~i~~~G~~ 119 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS--LISLLGLF 119 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH--HHHHHHHH
Confidence 34444455556666667778888888898887777777777777777788999999976 5554444332 22222222
Q ss_pred HHHHHHHHhhc---------c-------chh---HHHHHHHHHHhhhhhhhhhhhhhhccccC---C-C--chhHHHHHH
Q 008070 472 GPAFFLTQLSH---------V-------RTP---AMAVLCMACSQGSDAFSQSGLYSNHQDIG---P-R--YAGVLLGLS 526 (579)
Q Consensus 472 ~~~~~~~~~~~---------~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~~g~~~g~~ 526 (579)
+..+....... . ... .+...+..+..+.++.-+.....-.+.++ + + ....-+..+
T Consensus 120 ~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~ 199 (571)
T KOG1237|consen 120 GLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWF 199 (571)
T ss_pred HHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHH
Confidence 21111111100 0 111 11111112222222222222222222233 2 2 334777888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 008070 527 NTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLF 571 (579)
Q Consensus 527 ~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~ 571 (579)
.+..++|..++..+.-++-+..||...|.+..++.+++.++++..
T Consensus 200 yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 200 YFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 888999999999999998889999999999988888887776654
No 286
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.82 E-value=0.15 Score=39.19 Aligned_cols=44 Identities=23% Similarity=0.268 Sum_probs=37.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHH
Q 008070 203 PKRWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWW 246 (579)
Q Consensus 203 ~~~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 246 (579)
-....++++..+..+...++.+++|.++||+++++.++....++
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34678899999999999999999999999999998877766544
No 287
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.82 E-value=1.1 Score=46.99 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=77.5
Q ss_pred HHHhhhhhhhhhhh---hhcCCcHHHHHHHHHHHHHHHHHHhhhcc----------------CHHHHHHHHHHHHhhhhc
Q 008070 217 LLCNMDRIVGGIWA---DKFGGKPVLGFGVIWWSVATVLTPVAARI----------------GLPFLLIMRAFMGIGEGV 277 (579)
Q Consensus 217 ~~~~l~~~~~G~l~---Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~----------------~~~~ll~~r~l~Gig~g~ 277 (579)
.+..++..+.+.+. +++|+++++.++.++..++.++.-+.... ++...++..+++|++.+.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 33444445555555 45799999999999888888775543210 245678889999999999
Q ss_pred hhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 278 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 320 (579)
Q Consensus 278 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l 320 (579)
.....+.++.+.. +++|..+.++...-..++..++-......
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999 68899999998888888877766555443
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.56 E-value=2.9 Score=42.99 Aligned_cols=179 Identities=12% Similarity=0.049 Sum_probs=85.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHH
Q 008070 387 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQ 466 (579)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~ 466 (579)
+-.++.+++..+.....+..+.+-.+.|..+..+.+. .-.+.....+.+.+..++...+--+...|.....+. .+.
T Consensus 17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~--~l~ 92 (406)
T KOG1479|consen 17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGY--LLS 92 (406)
T ss_pred ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 3344555555555556666777777777666444443 333333444444444444444433333331111111 111
Q ss_pred HHHHHHHHHHHHHh-----hccchhHHHHHHHHHHhhhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008070 467 SIGFLGPAFFLTQL-----SHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT 541 (579)
Q Consensus 467 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~ 541 (579)
...++......+.. ......+...+......++.+.....+.......|+++....++=.+..+.+.+..- .+.
T Consensus 93 ~~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~-i~t 171 (406)
T KOG1479|consen 93 LIAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLR-ILT 171 (406)
T ss_pred HHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHH-HHH
Confidence 11111111111111 111223444555566666677777888888888888876555544333333332222 222
Q ss_pred HHHHhc--CChHHHHHHHHHHHHHHHHHHHH
Q 008070 542 GYILQR--GSWDDVFKVAVVLYIIGTLVWNL 570 (579)
Q Consensus 542 g~l~~~--~g~~~~~~~~~~~~~l~~~~~~~ 570 (579)
-+..+. .+-..-|.+..++.+++.+++..
T Consensus 172 ka~~~~~~~sA~~yF~~s~~~~llC~i~y~~ 202 (406)
T KOG1479|consen 172 KAAFSDSRTSALIYFITSTVILLLCFVLYLV 202 (406)
T ss_pred HHhcCCCCceeehhHHHHHHHHHHHHHHHHH
Confidence 222222 34444566666677777777663
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.11 E-value=1.9 Score=45.48 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 260 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 320 (579)
Q Consensus 260 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l 320 (579)
+-+..++..++.|+..|.....++.+..+..+++||..+-.+...+..+|..+|..++-.+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466778899999999999999999999999999999999999999999999888776443
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.04 E-value=0.029 Score=56.30 Aligned_cols=113 Identities=9% Similarity=0.011 Sum_probs=1.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhh-hccCcchHHHHHHHHHHHHHHHHHHH-----HHhhccchhHHHHHHHHHHhhhhh
Q 008070 428 LFCVLPWLTMAVFANMGGWIADTL-VSKGLSITAVRKIMQSIGFLGPAFFL-----TQLSHVRTPAMAVLCMACSQGSDA 501 (579)
Q Consensus 428 ~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 501 (579)
.++..++++-.+|+.+.++..-+. .+|.+........+. +-+....-.- ......+.++.++..++++..-+.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 346678899999999887643221 233222211111111 1111111000 000111223333333333333333
Q ss_pred hhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008070 502 FSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAAT 541 (579)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~ 541 (579)
.....+....+.++++++..+-.+..+.-.+|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444445556677776666666666666766666544
No 291
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.00 E-value=0.57 Score=48.31 Aligned_cols=58 Identities=12% Similarity=0.118 Sum_probs=49.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 516 PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFAT 573 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~ 573 (579)
++.+...+..+....++|..++..+.+++.++.||...|.+.++..+++.+.++.-++
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 3567788889999999999999999999999999999999999999988887766543
No 292
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.09 E-value=1.1 Score=42.98 Aligned_cols=147 Identities=13% Similarity=0.108 Sum_probs=79.0
Q ss_pred HHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 008070 414 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCM 493 (579)
Q Consensus 414 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (579)
|+-+.+|+...++|.++.......++...+.|-++||.|||+.-+ ..++..++..+. -+.+.+-+..+.=
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracv------tycitYiLsCiT----KhSpqYkVLmVGR 131 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV------TYCITYILSCIT----KHSPQYKVLMVGR 131 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccccee------eehHHHHHHHHh----hcCCceEEEeehh
Confidence 445568999999999888777777777788899999999997432 222222222221 1222233333333
Q ss_pred HHHhhhhhhhhhhhhh--hccccCC-----CchhHHHHHHH-HHHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHH
Q 008070 494 ACSQGSDAFSQSGLYS--NHQDIGP-----RYAGVLLGLSN-TAGVLAGVFGTAATGYILQR--GSWDDVFKVAVVLYII 563 (579)
Q Consensus 494 ~~~~~~~~~~~~~~~~--~~~~~~~-----~~~g~~~g~~~-~~~~lg~~ig~~l~g~l~~~--~g~~~~~~~~~~~~~l 563 (579)
.+++..........-. +.+...+ +-....++=.. +...+-++++...+-.+.|. .|....|-..+.+..+
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLai 211 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAI 211 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 3444444443333332 2222212 22223333222 33344555666666667776 4556667666666666
Q ss_pred HHHHHHH
Q 008070 564 GTLVWNL 570 (579)
Q Consensus 564 ~~~~~~~ 570 (579)
+..+.+-
T Consensus 212 gmAvil~ 218 (454)
T KOG4332|consen 212 GMAVILS 218 (454)
T ss_pred HHHHHHh
Confidence 6555443
No 293
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=90.43 E-value=1.2 Score=34.74 Aligned_cols=57 Identities=9% Similarity=0.042 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhhhccCHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF 263 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ 263 (579)
.....++.+..++++.++.+...++.++..+++.+..+.+...+..+.+++.+ +.+.
T Consensus 26 ~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~~ 82 (85)
T PF06779_consen 26 LSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFWL 82 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh--chHH
Confidence 45668899999999999999999999998889999999999999999999998 5543
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=90.37 E-value=7.1 Score=39.51 Aligned_cols=172 Identities=12% Similarity=0.117 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHH
Q 008070 389 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSI 468 (579)
Q Consensus 389 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 468 (579)
..+.+.+.+++..++--...+-...|+.+..|-+....+....+-....++...+.|...|+..|.|.+.... .+--+
T Consensus 28 ~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L--~lqNl 105 (503)
T KOG2601|consen 28 TVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL--LLQNL 105 (503)
T ss_pred eeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH--hhccH
Confidence 3344556666666666667777778888765644555555555555556666667788889999988765432 22222
Q ss_pred HHHHHHHHHH-Hhhcc-----chhHHHHHHHHHHhhhhhhhhhhhhh--h----------ccccCCCchhHHHHHHHHHH
Q 008070 469 GFLGPAFFLT-QLSHV-----RTPAMAVLCMACSQGSDAFSQSGLYS--N----------HQDIGPRYAGVLLGLSNTAG 530 (579)
Q Consensus 469 ~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~g~~~g~~~~~~ 530 (579)
..++.+..+. .+.+. ..+ +...++.+.............+ . .+.-++......++.....-
T Consensus 106 Sv~vagglvi~~l~~~~~~~~t~p-v~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iD 184 (503)
T KOG2601|consen 106 SVIVAGGLVITLLVHKDLKSATSP-VFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGID 184 (503)
T ss_pred HHHHHHHHHhhheeecchhccccc-HHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhh
Confidence 2222222221 11121 222 2222222222222221111111 1 11112333344446666667
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 008070 531 VLAGVFGTAATGYILQRGSWDDVFKVAVVLYII 563 (579)
Q Consensus 531 ~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l 563 (579)
.....+.|.+.|.+....+.+..-.+.++-.++
T Consensus 185 q~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 185 QSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 778899999999999988777655444444444
No 295
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.01 E-value=23 Score=35.56 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=22.7
Q ss_pred HHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhh
Q 008070 414 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADT 450 (579)
Q Consensus 414 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr 450 (579)
......|-+..+.+.+.+.+...+.+|+.+.-++.|.
T Consensus 33 LatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd 69 (508)
T COG4262 33 LATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDD 69 (508)
T ss_pred HHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCc
Confidence 3333355566677777777666677777666655543
No 296
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=87.70 E-value=18 Score=33.76 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=26.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHH
Q 008070 292 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 336 (579)
Q Consensus 292 ~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~ 336 (579)
.+++.+.-.......-++.++|.++++++.+..+. +..++.+++
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 34433444555566666777777788887777774 344444333
No 297
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=82.87 E-value=19 Score=36.83 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhh-----hhhccCcch
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD-----TLVSKGLSI 458 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~d-----r~g~~~~~~ 458 (579)
+.+..+...+.+...-..... .+|.+++. .|.+-+..+......+=. ---+++..++| |+||||..+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhcccccee
Confidence 445555555665555554444 88988885 577777666543332211 12345666777 999998544
No 298
>PRK10263 DNA translocase FtsK; Provisional
Probab=81.76 E-value=13 Score=43.93 Aligned_cols=37 Identities=11% Similarity=0.078 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 008070 531 VLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 531 ~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
..|+++|..+...+...+|.....+++.++.++++++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLiL 177 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTL 177 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3477777777777777767666666555555555444
No 299
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=81.62 E-value=37 Score=32.70 Aligned_cols=25 Identities=8% Similarity=-0.302 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 394 IISHFCHNWGTFILLTWMPTYYNQV 418 (579)
Q Consensus 394 ~l~~~~~~~~~~~~~~~~p~~l~~~ 418 (579)
.+...+.....++....=..|+++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3344444555666665556677764
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=80.96 E-value=14 Score=37.41 Aligned_cols=118 Identities=10% Similarity=0.132 Sum_probs=65.3
Q ss_pred hhhhhhhhhhhcCCcHHHHHHHHHHHHHHHH------HHhhhc----cCHHHHHHHHHHHHhhhhch----hhHHHHHHh
Q 008070 222 DRIVGGIWADKFGGKPVLGFGVIWWSVATVL------TPVAAR----IGLPFLLIMRAFMGIGEGVA----MPAMNNMLS 287 (579)
Q Consensus 222 ~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll------~~~a~~----~~~~~ll~~r~l~Gig~g~~----~~~~~~~i~ 287 (579)
..++.|.+.|+..|+|++...+.+.=++.++ .-+... .+++++..+-++.-...+.. ......+-.
T Consensus 79 lg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~R 158 (503)
T KOG2601|consen 79 LGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIER 158 (503)
T ss_pred hHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecc
Confidence 3377888999999999887776654333332 222221 13344444433332222211 111111223
Q ss_pred ccc----CcCchhHHH---HHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHH
Q 008070 288 KWI----PVSERSRSL---AFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 339 (579)
Q Consensus 288 ~~~----~~~~r~~~~---g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li 339 (579)
||. ..+.+.... +.....-..-.++.|++.|.+++..+-|..-.+.++..++
T Consensus 159 DWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 159 DWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred cEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 343 233344433 5555555666789999999999988888766666666555
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=78.03 E-value=1.4 Score=42.03 Aligned_cols=66 Identities=8% Similarity=0.189 Sum_probs=49.5
Q ss_pred hhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHH
Q 008070 379 IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 444 (579)
Q Consensus 379 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~ 444 (579)
.+|..-+++-.+..+.+.+.+.-...+.-..|++.|..+.+.++....+++-++..+.....+.+.
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~ 257 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN 257 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc
Confidence 345566777778888888888877778888899999888788888777777777666666555443
No 302
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=74.14 E-value=14 Score=36.56 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=57.9
Q ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 247 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 320 (579)
Q Consensus 247 ~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l 320 (579)
.+.-.+..+.+ +++..++.-+.-|+-.|..++...--+.+-.++++|-.+|+....+-++|..++.+++-.+
T Consensus 330 f~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 330 FLLQAWYWFTP--SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 33444456677 7788888888999988888888888888888899999999999999999988887776544
No 303
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=74.00 E-value=71 Score=29.13 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=35.0
Q ss_pred hchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHH
Q 008070 276 GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 336 (579)
Q Consensus 276 g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~ 336 (579)
+.-.....+++.+..|+++|.++.-+-..+..+--++.-.++.++.+. |+|..++.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 445666777888889887777665444333334444555566666664 35555544433
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=72.10 E-value=1.5 Score=43.96 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhh-cCCcHHHHH--HHHHHHHHHHHHHhhhc--------cCHHHHHHHHHHHHhhhhc
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADK-FGGKPVLGF--GVIWWSVATVLTPVAAR--------IGLPFLLIMRAFMGIGEGV 277 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~--~~~~~~~~~ll~~~a~~--------~~~~~ll~~r~l~Gig~g~ 277 (579)
..+..+..++.++|+.+.++.-=+ -.+|++++. .=+++.-..++|-..+. .+-+..++..++.|+..|-
T Consensus 185 v~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 185 VVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 456667888888888877764211 134444332 12222222222312110 0346677889999999999
Q ss_pred hhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008070 278 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI 319 (579)
Q Consensus 278 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~ 319 (579)
.....+.+..+..++++|..+-.+......+|..+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888888888888776543
No 305
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=71.22 E-value=1.5e+02 Score=31.60 Aligned_cols=53 Identities=9% Similarity=0.054 Sum_probs=39.9
Q ss_pred CchhHHHHHHHHHHHHH-HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 008070 517 RYAGVLLGLSNTAGVLA-GVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWN 569 (579)
Q Consensus 517 ~~~g~~~g~~~~~~~lg-~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~~ 569 (579)
+++...+|-++...++. ..+.-..++-+....||-..-.+.-++.+++.++++
T Consensus 317 ~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 317 NEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 45777788777766665 566677788888999999888888887777765544
No 306
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=70.67 E-value=1.6e+02 Score=31.67 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 008070 516 PRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLV 567 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~ 567 (579)
|++....+|-.+...++...+...+++.+.+..||..+..+..++.+++.+.
T Consensus 314 ~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~~ 365 (491)
T PF03219_consen 314 PNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGLL 365 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHH
Confidence 3566777777777777777777788899999999998887776666555443
No 307
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=69.70 E-value=88 Score=33.89 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccCcc
Q 008070 430 CVLPWLTMAVFANMGGWIADTLVSKGLS 457 (579)
Q Consensus 430 ~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 457 (579)
.....+.+.++...++++-..++.+++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 3444555666666666666667665544
No 308
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=68.78 E-value=27 Score=35.27 Aligned_cols=129 Identities=9% Similarity=0.036 Sum_probs=79.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCcH--HHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcc
Q 008070 212 CFSAFLLCNMDRIVGGIWADKFGGKP--VLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 289 (579)
Q Consensus 212 ~~~~~~~~~l~~~~~G~l~Dr~Grr~--~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 289 (579)
=++..++..+..+..|.+--++.|.. .+.++.+..+...++++.++ +.|...++.++...-.....+.+..-++..
T Consensus 277 eAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~n 354 (433)
T KOG3810|consen 277 EAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--HIWVCYAGYVLFRVIYQLTITIATFQIARN 354 (433)
T ss_pred HHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--ceehhhhhHHHHHhhHhhhhhHHHHHHHHh
Confidence 33444555566677788776666653 44455555555555566666 888888888888777777788888888888
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC-----------cchHHHHhhHHHHHHHHHHH
Q 008070 290 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-----------WPSVFYSFGSLGSIWFALWL 345 (579)
Q Consensus 290 ~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g-----------wr~~f~i~~~~~li~~~l~~ 345 (579)
...|.-|..+|+.... +.++-.++.-..++.-| +..-|.+.+++.++.+....
T Consensus 355 L~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 355 LSSELFGLVFGINTFV---ALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred hhhhhheeeeehHHHH---HHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 8788888888876553 33344444434444222 22235556666555544333
No 309
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=67.87 E-value=2.2e+02 Score=32.36 Aligned_cols=38 Identities=13% Similarity=0.115 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHH
Q 008070 300 AFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 337 (579)
Q Consensus 300 g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~ 337 (579)
-+...+..++.++..+++.+++..++|...+++.++++
T Consensus 104 rLl~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 104 MLLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 33444445555565666555555567777776666554
No 310
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=67.37 E-value=2e+02 Score=31.61 Aligned_cols=30 Identities=23% Similarity=0.109 Sum_probs=17.4
Q ss_pred ChhhhhHHhHHHHHHHHHHHHHHHHHhhhh
Q 008070 422 NLTESGLFCVLPWLTMAVFANMGGWIADTL 451 (579)
Q Consensus 422 s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~ 451 (579)
++...++.+..++++..+--++.+....++
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455556666677777655555555544443
No 311
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=67.08 E-value=26 Score=37.18 Aligned_cols=68 Identities=10% Similarity=0.083 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChhhhhHHhHH---HHHHHHHHHHHHHHHhhhhhccCcchH
Q 008070 392 ALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLTESGLFCVL---PWLTMAVFANMGGWIADTLVSKGLSIT 459 (579)
Q Consensus 392 ~~~l~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~~~g~~~~~---~~~~~~ig~~~~g~l~dr~g~~~~~~~ 459 (579)
++.+.+++++.-......-+|..+++ ..+.+-.+.+.+... +.+=-.-+.++=....+|+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhh
Confidence 34555555555555445677888877 235566665544222 222222233334455668999986544
No 312
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=66.49 E-value=39 Score=30.20 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=33.6
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc------CcchHHHHhhHHHHHHHHHHHh
Q 008070 289 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------GWPSVFYSFGSLGSIWFALWLK 346 (579)
Q Consensus 289 ~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~------gwr~~f~i~~~~~li~~~l~~~ 346 (579)
.++.+++.+..+.+.++.-.+...--++=+.+.... .+...+++.++++.+.+++.-.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 344455666666665555554444444444444332 5778888888887776655433
No 313
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=64.29 E-value=1.6e+02 Score=29.29 Aligned_cols=13 Identities=8% Similarity=0.414 Sum_probs=6.1
Q ss_pred HHHHHHHHhhhhc
Q 008070 265 LIMRAFMGIGEGV 277 (579)
Q Consensus 265 l~~r~l~Gig~g~ 277 (579)
.+...+.+++.|.
T Consensus 264 ~~~~~~~a~aaG~ 276 (317)
T PF02535_consen 264 IVSGILLAFAAGT 276 (317)
T ss_pred HHHHHHHHHHHHH
Confidence 3444445555443
No 314
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.07 E-value=32 Score=27.90 Aligned_cols=32 Identities=16% Similarity=0.387 Sum_probs=26.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008070 516 PRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 547 (579)
Q Consensus 516 ~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~~ 547 (579)
+..++.+.++-...-.+++.+.....||+.|+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888888888888999999999999998
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=60.32 E-value=39 Score=29.67 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=20.3
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHH
Q 008070 510 NHQDIGPRYAGVLLGLSNTAGVLAGVF 536 (579)
Q Consensus 510 ~~~~~~~~~~g~~~g~~~~~~~lg~~i 536 (579)
+...-+++..|...|+-.+-.+++.+.
T Consensus 119 lSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 119 LSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred cccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344467888899999988888877654
No 316
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=53.76 E-value=2.9e+02 Score=29.09 Aligned_cols=147 Identities=8% Similarity=-0.118 Sum_probs=68.5
Q ss_pred hcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchHHHHhhHHHHHHHHHHHhhhcCCCCCChhhcHHHHhh
Q 008070 287 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH 365 (579)
Q Consensus 287 ~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~-~gwr~~f~i~~~~~li~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
.|..|+++|-....+.....+.-..++....|.+... .++++.++...+-.++..+...+.-..-++..-..-
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpqm------ 84 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQM------ 84 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChh------
Confidence 3556777774444555555554444554444444332 566666654433333333333322211111111000
Q ss_pred hhcCCcccccccchhHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHH
Q 008070 366 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 445 (579)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g 445 (579)
...|..+-.+.-+...+...+...++++++.++.-.... ..+.....+...+.++...+..+++-
T Consensus 85 -------------i~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~~l~~ifG~ 149 (442)
T COG1457 85 -------------ILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLMTLVTIFGY 149 (442)
T ss_pred -------------eeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHHHHHHHHhH
Confidence 001112333334455555555566666666665444311 11333344444455566666666666
Q ss_pred HHhhhhhcc
Q 008070 446 WIADTLVSK 454 (579)
Q Consensus 446 ~l~dr~g~~ 454 (579)
+...++.|-
T Consensus 150 r~l~~l~~~ 158 (442)
T COG1457 150 RALHKLERI 158 (442)
T ss_pred HHHHHHHHH
Confidence 666666554
No 317
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=52.88 E-value=52 Score=28.86 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHH
Q 008070 260 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 313 (579)
Q Consensus 260 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lg 313 (579)
++..+++..++.|+| .....+.+++.-+++++-|..+|+-..-.+++-+.-
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 344455555555554 345566777777778889999999988888876543
No 318
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.33 E-value=52 Score=26.74 Aligned_cols=36 Identities=22% Similarity=0.099 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhc-CCcHHHHHHHHH
Q 008070 210 LLCFSAFLLCNMDRIVGGIWADKF-GGKPVLGFGVIW 245 (579)
Q Consensus 210 ~l~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~ 245 (579)
.-.+.-++...+.....||+.||| |-+++.++..++
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 334444555555557789999987 556654444333
No 319
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=45.12 E-value=1.2e+02 Score=29.78 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhh
Q 008070 240 GFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 276 (579)
Q Consensus 240 ~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g 276 (579)
+.+.++++++.++..+... +.|.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~~-~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFP-YPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHH
Confidence 3444555455555554442 34444444555555444
No 320
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=44.91 E-value=3.1e+02 Score=27.72 Aligned_cols=61 Identities=16% Similarity=0.051 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccC
Q 008070 388 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 455 (579)
Q Consensus 388 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~ 455 (579)
+.++.+.+...+.+.++.+..... ..... ++.....+.+ .+.-+...++.+.+++++|.|.
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq-~~vn~--~lg~~sl~~~----y~~l~~s~m~~~~~Ir~~g~K~ 89 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQ-TSVNY--DLGTVSLGAL----YLSLIDSSMFMPLLIRFLGTKW 89 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-HHHhc--Ccccchhhhh----hHHHHHHHHHHHHHHHHHhhHH
Confidence 344555555555555554443332 22221 2222223322 3444555666668999999984
No 321
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=44.40 E-value=3.1e+02 Score=28.80 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHH
Q 008070 238 VLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLA 300 (579)
Q Consensus 238 ~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g 300 (579)
-+++|+.+...-.++.+++-..++ ..+.++...+ .......++.......+|+..++
T Consensus 328 Y~LVGlAl~lFYlLLLSlSEhi~F---~~AYliAa~a---~i~Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 328 YLLVGLALVLFYLLLLSLSEHIGF---NLAYLIAALA---CIGLISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhch---HHHHHHHHHH---HHHHHHHHHHHHHhcchHHHHHH
Confidence 467777777777788888864333 3333333222 23334455566665566655443
No 322
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=42.69 E-value=2.7e+02 Score=27.38 Aligned_cols=56 Identities=9% Similarity=0.057 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 264 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 320 (579)
Q Consensus 264 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l 320 (579)
.-..|.+.|+-.- .+.+.++++.-+||+++.--..--.....++..++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888887654 4567788999999855443333333344444445555555443
No 323
>PRK15015 carbon starvation protein A; Provisional
Probab=40.19 E-value=5.6e+02 Score=28.47 Aligned_cols=35 Identities=11% Similarity=0.330 Sum_probs=18.9
Q ss_pred cccCcCchhHHHHH-HHHHHHHHHHHHHHHHHHhhcccCcc
Q 008070 288 KWIPVSERSRSLAF-VYSGMYLGSVTGLAVSPILIQKFGWP 327 (579)
Q Consensus 288 ~~~~~~~r~~~~g~-~~~~~~lG~~lgp~i~~~l~~~~gwr 327 (579)
|+.|.+++ ..+|- +....+.|.++||.++. .+||-
T Consensus 79 DYvPt~k~-VLfGHHFasIAGAGPivGPvlAa----~~Gwl 114 (701)
T PRK15015 79 DYVPTDKK-VLFGHHFAAIAGAGPLVGPVLAA----QMGYL 114 (701)
T ss_pred CcCcCCcc-chhHHHHHHHhccCccHHHHHHH----HHcch
Confidence 45554443 44443 34444566666766665 46775
No 324
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=37.23 E-value=3.9e+02 Score=25.79 Aligned_cols=16 Identities=13% Similarity=0.486 Sum_probs=9.9
Q ss_pred HHHHhhhhhccCcchH
Q 008070 444 GGWIADTLVSKGLSIT 459 (579)
Q Consensus 444 ~g~l~dr~g~~~~~~~ 459 (579)
+-+++.|+..|.+...
T Consensus 260 Gk~lAskIS~rtVt~~ 275 (294)
T KOG2881|consen 260 GKYLASKISVRTVTLI 275 (294)
T ss_pred hHHHhhhheeEEEEEe
Confidence 3356777877765443
No 325
>PF13491 DUF4117: Domain of unknown function (DUF4117)
Probab=37.08 E-value=2.2e+02 Score=25.18 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 008070 530 GVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVW 568 (579)
Q Consensus 530 ~~lg~~ig~~l~g~l~~~~g~~~~~~~~~~~~~l~~~~~ 568 (579)
...|+.+|..+...+.+..|...++.+..++.++++++.
T Consensus 120 ~~~GG~iG~~l~~~l~~~lG~~Ga~iil~~~~~~~l~l~ 158 (171)
T PF13491_consen 120 YGGGGIIGYLLASLLVKLLGKVGALIILLVLLLIGLLLL 158 (171)
T ss_pred CCCCCHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 345677777777777777777777766666666555544
No 326
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=36.87 E-value=1.3e+02 Score=20.52 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHh
Q 008070 309 GSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 346 (579)
Q Consensus 309 G~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~ 346 (579)
|+.+|..+.+.+-...++.+.-++.+++..+.++..+.
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~~ 44 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIYR 44 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 34444444333332333455555666666655554443
No 327
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=36.82 E-value=5.3e+02 Score=27.23 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHH---------HHHhhcccCcchHH
Q 008070 260 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV---------SPILIQKFGWPSVF 330 (579)
Q Consensus 260 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i---------~~~l~~~~gwr~~f 330 (579)
.+..+++..++.|+..|....-....+ .+.-|..++-......+|.++|-++ +..+.+.+|.+..-
T Consensus 24 pF~aLl~~al~~gl~~G~~~~~i~~~i-----~~GfG~tl~~igivI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~~ 98 (441)
T PF02447_consen 24 PFLALLIVALIVGLLAGMPPEEIVKSI-----TKGFGSTLGSIGIVIALGAMIGKLLEESGAAERIANTLLKKFGEKRAP 98 (441)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCccc
Confidence 467788888999998875544333333 2445667777777777777777664 33445567766554
Q ss_pred HHhhHHHHHHHH
Q 008070 331 YSFGSLGSIWFA 342 (579)
Q Consensus 331 ~i~~~~~li~~~ 342 (579)
+..++.+.+..+
T Consensus 99 ~A~~i~g~iv~I 110 (441)
T PF02447_consen 99 LALAITGFIVGI 110 (441)
T ss_pred HHHHHHHHHhhh
Confidence 544444444433
No 328
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=35.48 E-value=1.6e+02 Score=23.79 Aligned_cols=43 Identities=12% Similarity=0.108 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhh-cCCcHHHHHHHHHHH
Q 008070 205 RWVVVLLCFSAFLLCNMDRIVGGIWADK-FGGKPVLGFGVIWWS 247 (579)
Q Consensus 205 ~~~v~~l~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~ 247 (579)
.....-......+...+...+.|.+.|+ |+-++.+.+..++.+
T Consensus 41 ~l~~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 41 GLGMFGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3333344444455555556777888886 565554444443333
No 329
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=35.27 E-value=4.4e+02 Score=25.87 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=33.3
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHH-HHHHHHHHHhhhhhccC
Q 008070 381 WKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMA-VFANMGGWIADTLVSKG 455 (579)
Q Consensus 381 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~-ig~~~~g~l~dr~g~~~ 455 (579)
++++.++|+.+..+...............|.|. +-...++++-+.+.-+.++ +|.+ ++-+|+.+-.
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn------~g~~leaSLGY~InPL~~VllG~l---flkErls~~Q 128 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN------NGHVLEASLGYFINPLVNVLLGRL---FLKERLSRLQ 128 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC------CCchhHHHhHHHHHHHHHHHHHHH---HHHhhccHHH
Confidence 344677887776666655555555555445442 1122334433334444333 3443 3557776553
No 330
>PTZ00370 STEVOR; Provisional
Probab=34.71 E-value=50 Score=32.04 Aligned_cols=29 Identities=7% Similarity=0.111 Sum_probs=18.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 008070 548 GSWDDVFKVAVVLYIIGTLVWNLFATGER 576 (579)
Q Consensus 548 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 576 (579)
..|..+-+++.++.++.+++++++.|++|
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK 283 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRK 283 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45666666666666666666666655554
No 331
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=34.60 E-value=1.2e+02 Score=28.63 Aligned_cols=93 Identities=27% Similarity=0.368 Sum_probs=54.9
Q ss_pred hhhhhhhhhcCCcH--------HHHHHHHHHHHH-HHHHHhhhccCHHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCc
Q 008070 224 IVGGIWADKFGGKP--------VLGFGVIWWSVA-TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE 294 (579)
Q Consensus 224 ~~~G~l~Dr~Grr~--------~l~~~~~~~~~~-~ll~~~a~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~ 294 (579)
+=.+.+.||||-.- ++++|.++-.+. .++.++..+.++..=.....-.|+|.+..+.++.+-+.+.+| +.
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~ 203 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EM 203 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-ch
Confidence 44567899998532 344444333222 222222221122233566677899999999999999999996 55
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 008070 295 RSRSLAFVYSGMYLGSVTGLAVS 317 (579)
Q Consensus 295 r~~~~g~~~~~~~lG~~lgp~i~ 317 (579)
.....++.....-+..+.|-.+.
T Consensus 204 a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 204 ADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666555555554443
No 332
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=34.09 E-value=2.9e+02 Score=25.42 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=24.8
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 292 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 322 (579)
Q Consensus 292 ~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~ 322 (579)
.++.+++.++...+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888888888888877754
No 333
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=34.01 E-value=3.6e+02 Score=28.65 Aligned_cols=25 Identities=0% Similarity=-0.393 Sum_probs=12.8
Q ss_pred HhhCCChhhhhHHhHHHHHHHHHHH
Q 008070 417 QVLKFNLTESGLFCVLPWLTMAVFA 441 (579)
Q Consensus 417 ~~~g~s~~~~g~~~~~~~~~~~ig~ 441 (579)
+..|++....--+.....+++++|.
T Consensus 46 kr~g~~~~~i~dl~i~~vi~giIGA 70 (460)
T PRK13108 46 TARGGERGMTYDIALWAVPFGLIGG 70 (460)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 3357777665444444444444443
No 334
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=33.28 E-value=4.6e+02 Score=25.46 Aligned_cols=91 Identities=14% Similarity=0.228 Sum_probs=43.3
Q ss_pred HHhhhhhhhhhhhhh-cCCcHHHH----HHHHHHHHHHHHH-Hhhhc--cCHHHHHHHHHHHHhhhhchhhHHHHHHhcc
Q 008070 218 LCNMDRIVGGIWADK-FGGKPVLG----FGVIWWSVATVLT-PVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 289 (579)
Q Consensus 218 ~~~l~~~~~G~l~Dr-~Grr~~l~----~~~~~~~~~~ll~-~~a~~--~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 289 (579)
+.+++....|.+... +.||+.+. .+++++.+..++. .+..+ .+...+++..++.|++.=+..+... .+.+-
T Consensus 153 g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL-~lPhE 231 (267)
T PF07672_consen 153 GYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVIL-NLPHE 231 (267)
T ss_pred HHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHh-cChhh
Confidence 334555666666654 44555433 3344444444442 12221 1245677888888876543433332 23333
Q ss_pred cC---cCchhHHHHHHHHHHHHHHHH
Q 008070 290 IP---VSERSRSLAFVYSGMYLGSVT 312 (579)
Q Consensus 290 ~~---~~~r~~~~g~~~~~~~lG~~l 312 (579)
++ |++-|...|+ .+++|.++
T Consensus 232 yK~~~pk~ig~~Fg~---iWGfGY~~ 254 (267)
T PF07672_consen 232 YKGYNPKKIGIQFGL---IWGFGYIF 254 (267)
T ss_pred hcCCCcceehhHHHH---HHHHHHHH
Confidence 32 3444444444 44444443
No 335
>PRK10263 DNA translocase FtsK; Provisional
Probab=33.17 E-value=3.2e+02 Score=32.97 Aligned_cols=25 Identities=20% Similarity=0.099 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHhhcccCcchHHHH
Q 008070 308 LGSVTGLAVSPILIQKFGWPSVFYS 332 (579)
Q Consensus 308 lG~~lgp~i~~~l~~~~gwr~~f~i 332 (579)
.|+++|.+++.++...+|.-..+++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHH
Confidence 4666666666666665554444433
No 336
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=33.10 E-value=3.6e+02 Score=30.49 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=32.3
Q ss_pred hhhhhhhhhc----CCcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhh
Q 008070 224 IVGGIWADKF----GGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 276 (579)
Q Consensus 224 ~~~G~l~Dr~----Grr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g 276 (579)
.+.+.++|.= ||.+-++++.+++.++.+...+... ..|.+...-++.+++.+
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~-~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG-KPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 5667777754 4455677888888888777766652 23445555555555544
No 337
>PRK10692 hypothetical protein; Provisional
Probab=32.86 E-value=1.2e+02 Score=23.49 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=10.1
Q ss_pred CcHHHHHHHHHHHHHHHH
Q 008070 235 GKPVLGFGVIWWSVATVL 252 (579)
Q Consensus 235 rr~~l~~~~~~~~~~~ll 252 (579)
||...++|.++++++.++
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 455555666665555544
No 338
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=32.44 E-value=4.5e+02 Score=25.13 Aligned_cols=25 Identities=24% Similarity=0.355 Sum_probs=13.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Q 008070 296 SRSLAFVYSGMYLGSVTGLAVSPIL 320 (579)
Q Consensus 296 ~~~~g~~~~~~~lG~~lgp~i~~~l 320 (579)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555556666665554443
No 339
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=32.19 E-value=6.3e+02 Score=26.68 Aligned_cols=9 Identities=33% Similarity=0.582 Sum_probs=4.3
Q ss_pred hhhhhhhcC
Q 008070 226 GGIWADKFG 234 (579)
Q Consensus 226 ~G~l~Dr~G 234 (579)
.-|++...|
T Consensus 443 MVWwa~~iG 451 (588)
T KOG1307|consen 443 MVWWANIIG 451 (588)
T ss_pred HHHHHHHcc
Confidence 344555544
No 340
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=31.85 E-value=4.8e+02 Score=25.24 Aligned_cols=49 Identities=8% Similarity=0.082 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCcHHHHHHHHHHHHHHHHHHhh
Q 008070 208 VVLLCFSAFLLCNMDRIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 256 (579)
Q Consensus 208 v~~l~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ll~~~a 256 (579)
+.+...+..+...+...-+-.+.++.|.|..+.-..-...++..+..+.
T Consensus 29 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~ 77 (294)
T PF03706_consen 29 LLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFFLNNIT 77 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444444444455556677777777776666555555555554444333
No 341
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=31.71 E-value=6.4e+02 Score=26.63 Aligned_cols=41 Identities=12% Similarity=-0.014 Sum_probs=28.4
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHH
Q 008070 292 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 337 (579)
Q Consensus 292 ~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~ 337 (579)
+.+.+...++..+..+.|.+.-|+..+. +|-|...+..+++
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~ 59 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLA 59 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHH
Confidence 5667788999999999998888887764 3444444444333
No 342
>COG5373 Predicted membrane protein [Function unknown]
Probab=31.54 E-value=8.3e+02 Score=27.86 Aligned_cols=39 Identities=13% Similarity=-0.067 Sum_probs=22.7
Q ss_pred HHHHHHHHHHH-HHhhcccCcchHHHHhhHHHHHHHHHHH
Q 008070 307 YLGSVTGLAVS-PILIQKFGWPSVFYSFGSLGSIWFALWL 345 (579)
Q Consensus 307 ~lG~~lgp~i~-~~l~~~~gwr~~f~i~~~~~li~~~l~~ 345 (579)
++..+.+.+.+ ..+.+.++-...|...+.+++....+.+
T Consensus 206 Ga~~Lf~tvyAA~~iyd~i~pgaAf~LL~lIs~~t~~LAl 245 (931)
T COG5373 206 GALVLFGTVYAAYGIYDLIGPGAAFALLVLISLATIGLAL 245 (931)
T ss_pred chHHHHHHHHHHhcccccCChhHHHHHHHHHHHHHHHHHH
Confidence 33444444433 3456667777778777777766555444
No 343
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=31.53 E-value=1.9e+02 Score=26.57 Aligned_cols=30 Identities=3% Similarity=-0.194 Sum_probs=13.6
Q ss_pred HHHHHHHhhcccCcchHHHHhhHHHHHHHH
Q 008070 313 GLAVSPILIQKFGWPSVFYSFGSLGSIWFA 342 (579)
Q Consensus 313 gp~i~~~l~~~~gwr~~f~i~~~~~li~~~ 342 (579)
..++++.......-.|.....|++.+...+
T Consensus 42 ~Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 42 ASLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 344444444444445554444544444443
No 344
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=30.24 E-value=5e+02 Score=29.37 Aligned_cols=52 Identities=13% Similarity=0.039 Sum_probs=33.2
Q ss_pred hhhhhhhhhcC----CcHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHhhhh
Q 008070 224 IVGGIWADKFG----GKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 276 (579)
Q Consensus 224 ~~~G~l~Dr~G----rr~~l~~~~~~~~~~~ll~~~a~~~~~~~ll~~r~l~Gig~g 276 (579)
.+++.+.|.=| |.+-++++.++++++.+...+... ..+.+...-++.+++.+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~-~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFP-KPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHH
Confidence 55666777544 456688888888888888776652 23445555555555544
No 345
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.01 E-value=2.6e+02 Score=22.65 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccC
Q 008070 301 FVYSGMYLGSVTGLAVSPILIQKFG 325 (579)
Q Consensus 301 ~~~~~~~lG~~lgp~i~~~l~~~~g 325 (579)
.......+..++|..+|-+|-..++
T Consensus 47 ~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 47 LIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3344444555666666667766665
No 346
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=28.29 E-value=19 Score=34.49 Aligned_cols=13 Identities=23% Similarity=0.715 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHh
Q 008070 559 VLYIIGTLVWNLF 571 (579)
Q Consensus 559 ~~~~l~~~~~~~~ 571 (579)
.+.++++++++.+
T Consensus 173 L~LFlaiLIWlY~ 185 (381)
T PF05297_consen 173 LLLFLAILIWLYV 185 (381)
T ss_dssp -------------
T ss_pred HHHHHHHHHHHHh
Confidence 3444555555444
No 347
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=27.42 E-value=4e+02 Score=22.84 Aligned_cols=49 Identities=16% Similarity=0.128 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhh-hhcCCcHHHHHHHHHHHHHHHHHHh
Q 008070 206 WVVVLLCFSAFLLCNMDRIVGGIWA-DKFGGKPVLGFGVIWWSVATVLTPV 255 (579)
Q Consensus 206 ~~v~~l~~~~~~~~~l~~~~~G~l~-Dr~Grr~~l~~~~~~~~~~~ll~~~ 255 (579)
|...+...+.-....+.+...+.+. +++++.... -..++-.+++++.++
T Consensus 7 ~~~~l~V~~GG~~Ga~lRy~l~~~~~~~~~~~fP~-gTl~VNv~GsfllG~ 56 (133)
T PRK14218 7 WQSLLLVMLGGAFGSGLRFVIGSCLLQRFGAGFPW-GTLAVNLIGSFVAGF 56 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-HHHHHHHHHHHHHHH
Confidence 4444444444444444555555444 445543221 233344444444443
No 348
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=27.41 E-value=9e+02 Score=26.96 Aligned_cols=12 Identities=0% Similarity=-0.216 Sum_probs=5.7
Q ss_pred ccCcchHHHHhh
Q 008070 323 KFGWPSVFYSFG 334 (579)
Q Consensus 323 ~~gwr~~f~i~~ 334 (579)
..+|.+......
T Consensus 271 s~~~~~~~~~~~ 282 (700)
T COG1480 271 SVNILPLLGLLI 282 (700)
T ss_pred cccHHHHHHHHH
Confidence 345655444433
No 349
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=27.38 E-value=32 Score=29.32 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=9.1
Q ss_pred chHHHHhhHHHHHHHHHH
Q 008070 327 PSVFYSFGSLGSIWFALW 344 (579)
Q Consensus 327 r~~f~i~~~~~li~~~l~ 344 (579)
||+++++.++.+++++++
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 566665555444443333
No 350
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=27.18 E-value=1.4e+02 Score=23.02 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=20.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHh---------hhccCHHHHHHHHHHHHhhhh
Q 008070 235 GKPVLGFGVIWWSVATVLTPV---------AARIGLPFLLIMRAFMGIGEG 276 (579)
Q Consensus 235 rr~~l~~~~~~~~~~~ll~~~---------a~~~~~~~ll~~r~l~Gig~g 276 (579)
||...++|.++++++.+.+.. .++.+.+.++.-..+.|++.|
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv~gigysi~~~~~~L~Lp~~~~~gal~~IFiG 53 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVVMVGGIGYSILSQIPQLGLPQFLAHGALFSIFIG 53 (89)
T ss_pred chhhHHHhhHHHHHhHHHHHHhHHHHHHHhcccCCCcHHHHhhHHHHHHHH
Confidence 455555666655555544221 122344555555555555544
No 351
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=26.04 E-value=7.3e+02 Score=25.46 Aligned_cols=40 Identities=18% Similarity=0.447 Sum_probs=21.0
Q ss_pred cccCcCchhHHHHHH-HHHHHHHHHHHHHHHHHhhcccCcc-hHHHH
Q 008070 288 KWIPVSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFGWP-SVFYS 332 (579)
Q Consensus 288 ~~~~~~~r~~~~g~~-~~~~~lG~~lgp~i~~~l~~~~gwr-~~f~i 332 (579)
|+.| .+|-..++.. ....+.|.++||+++ ..+||- ...|+
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~a----a~~GwlPa~lWI 89 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILA----AQFGWLPALLWI 89 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHH----HHhcchHHHHHH
Confidence 3443 3444556554 333455666666665 347886 33343
No 352
>COG3619 Predicted membrane protein [Function unknown]
Probab=24.99 E-value=6e+02 Score=24.07 Aligned_cols=40 Identities=18% Similarity=0.344 Sum_probs=21.8
Q ss_pred HhcccCcC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 008070 286 LSKWIPVS-ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 325 (579)
Q Consensus 286 i~~~~~~~-~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~g 325 (579)
+.+++..| +.-..-.+.....-++.++|.++++++...+|
T Consensus 156 l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 156 LGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444332 22233444455556667777777777766554
No 353
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=24.92 E-value=1.4e+03 Score=28.48 Aligned_cols=19 Identities=5% Similarity=-0.122 Sum_probs=11.5
Q ss_pred cCcchHHHHhhHHHHHHHH
Q 008070 324 FGWPSVFYSFGSLGSIWFA 342 (579)
Q Consensus 324 ~gwr~~f~i~~~~~li~~~ 342 (579)
.+|+.++++.+++.++.++
T Consensus 195 ~sw~Lalv~l~~~pl~~~~ 213 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYIC 213 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHH
Confidence 5788887766555444333
No 354
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=24.61 E-value=8.5e+02 Score=25.76 Aligned_cols=62 Identities=11% Similarity=0.029 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhcc
Q 008070 393 LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 454 (579)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~ 454 (579)
..+..+-..+.+++-....|.......+++.++..++.....+..-++.++--....+.|.+
T Consensus 18 ~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~ 79 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSG 79 (451)
T ss_pred HHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccC
Confidence 34444555566677777888888888999999999998888888888887665533334334
No 355
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=24.44 E-value=6e+02 Score=23.95 Aligned_cols=26 Identities=15% Similarity=0.083 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhhhhhccCcchHHHH
Q 008070 437 MAVFANMGGWIADTLVSKGLSITAVR 462 (579)
Q Consensus 437 ~~ig~~~~g~l~dr~g~~~~~~~~~~ 462 (579)
..+.-++.|++.-++..+++...+.+
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~~~~l~ 205 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWIISGII 205 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 45556677888888877766554443
No 356
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.37 E-value=25 Score=33.75 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=0.0
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcch
Q 008070 425 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 458 (579)
Q Consensus 425 ~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~ 458 (579)
..|+++.+..+.-+++..+.-++..++|...+.+
T Consensus 106 F~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs~Wti 139 (381)
T PF05297_consen 106 FVGIVILFLCCLLALGVWFYMWLLRELGASFWTI 139 (381)
T ss_dssp ----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3455555555555555555566777887765443
No 357
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=23.84 E-value=6.7e+02 Score=24.23 Aligned_cols=65 Identities=20% Similarity=0.289 Sum_probs=37.8
Q ss_pred HHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhh
Q 008070 268 RAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 334 (579)
Q Consensus 268 r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~ 334 (579)
-.+.=...|.-.....+++.+.+|+++|-++.-+--.+.-+=-++.-..+.++.+. |.+.+.+.+
T Consensus 23 l~~lE~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l--~~~l~~~fg 87 (254)
T COG0861 23 LILLEIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL--TQPLLYIFG 87 (254)
T ss_pred HHHHHHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 33333445667888889999999988877765433222222233334445556554 566666633
No 358
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=23.46 E-value=8.4e+02 Score=25.28 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=20.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008070 293 SERSRSLAFVYSGMYLGSVTGLAVSPILIQ 322 (579)
Q Consensus 293 ~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~ 322 (579)
.||.+...+.....-++.++-|+++-+.-.
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 467777777777777777777777665544
No 359
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=23.38 E-value=1.2e+03 Score=26.88 Aligned_cols=19 Identities=5% Similarity=0.200 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhhCCChh
Q 008070 406 ILLTWMPTYYNQVLKFNLT 424 (579)
Q Consensus 406 ~~~~~~p~~l~~~~g~s~~ 424 (579)
.+..+.+.++.+.+.++..
T Consensus 23 ll~~l~s~~lkeRl~Ls~~ 41 (810)
T TIGR00844 23 SIFSLVSLFVKEKLYIGES 41 (810)
T ss_pred HHHHHHHHHHHhhcCCcHH
Confidence 3445667777765665543
No 360
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=23.33 E-value=7.4e+02 Score=24.56 Aligned_cols=40 Identities=15% Similarity=0.104 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhh
Q 008070 295 RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 334 (579)
Q Consensus 295 r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~ 334 (579)
....-++.....-.-+-+|.++++.++..++|.|.=-+.+
T Consensus 153 lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~Dpi~s 192 (296)
T COG1230 153 LNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWLDPILS 192 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchHHH
Confidence 3334444444333334455666777777788988544433
No 361
>PRK11715 inner membrane protein; Provisional
Probab=23.28 E-value=7.8e+02 Score=25.93 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 008070 239 LGFGVIWWSVATVLTPVAA 257 (579)
Q Consensus 239 l~~~~~~~~~~~ll~~~a~ 257 (579)
+++|+.+...-.++.+++-
T Consensus 335 lLVGlAl~lFYLLLLSlSE 353 (436)
T PRK11715 335 LLVGLALVLFYLLLLSLSE 353 (436)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4444444444444555554
No 362
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=21.47 E-value=3.8e+02 Score=20.73 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh--cccCcchHHHHhhHHHHHHHHH
Q 008070 299 LAFVYSGMYLGSVTGLAVSPILI--QKFGWPSVFYSFGSLGSIWFAL 343 (579)
Q Consensus 299 ~g~~~~~~~lG~~lgp~i~~~l~--~~~gwr~~f~i~~~~~li~~~l 343 (579)
..+......+...+|++++..|. ...||+..|++.+--+++.+++
T Consensus 15 ~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fvi 61 (81)
T PF13937_consen 15 AILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVI 61 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHH
Confidence 33333344444445566666663 3468999999876555544443
No 363
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.45 E-value=9.7e+02 Score=25.22 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchHHHHhhHHHHHHHHH
Q 008070 264 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFAL 343 (579)
Q Consensus 264 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~~~~gwr~~f~i~~~~~li~~~l 343 (579)
--+-..+.|++...++....++ .|+.+...+..-++...-.+++.-+...+ -+|+....+.+.+.++-.++
T Consensus 324 HpiQY~LVGlAl~lFYlLLLSl------SEhi~F~~AYliAa~a~i~Li~~Y~~~vl---~~~k~~~~~~~~L~~LY~~L 394 (430)
T PF06123_consen 324 HPIQYLLVGLALVLFYLLLLSL------SEHIGFNLAYLIAALACIGLISLYLSSVL---KSWKRGLIFAGLLAALYGFL 394 (430)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH------HhhhchHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHHHHHHHH
Confidence 3455667777776665554443 35566666655554444444444444433 36888888887777766655
Q ss_pred HHhh
Q 008070 344 WLKK 347 (579)
Q Consensus 344 ~~~~ 347 (579)
...+
T Consensus 395 y~lL 398 (430)
T PF06123_consen 395 YVLL 398 (430)
T ss_pred HHHH
Confidence 5544
No 364
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=21.28 E-value=9e+02 Score=24.82 Aligned_cols=85 Identities=20% Similarity=0.207 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHHHhcccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh-cccCcchHHHHhhHHHHH
Q 008070 261 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI-QKFGWPSVFYSFGSLGSI 339 (579)
Q Consensus 261 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~lG~~lgp~i~~~l~-~~~gwr~~f~i~~~~~li 339 (579)
-+.+.+.-++.|.-.|...|..+.++..-. ++-.-..+.....-.+|.+.+.++-.++. .+.|..-.-.+.+++.++
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~ 182 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLA 182 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHH
Confidence 466778888888888888898888887622 22222233333346667766666655543 344543333445555555
Q ss_pred HHHHHHhh
Q 008070 340 WFALWLKK 347 (579)
Q Consensus 340 ~~~l~~~~ 347 (579)
..+..++.
T Consensus 183 aAvv~~fl 190 (508)
T COG4262 183 AAVVTLFL 190 (508)
T ss_pred HHHHHHHH
Confidence 55444444
No 365
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=20.98 E-value=1.4e+02 Score=28.95 Aligned_cols=29 Identities=7% Similarity=0.125 Sum_probs=17.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 008070 548 GSWDDVFKVAVVLYIIGTLVWNLFATGER 576 (579)
Q Consensus 548 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 576 (579)
..|..+-+++.++.++.+++++++.|++|
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK 287 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRK 287 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45555666666666666666666655544
No 366
>PRK02237 hypothetical protein; Provisional
Probab=20.66 E-value=1.7e+02 Score=23.92 Aligned_cols=37 Identities=8% Similarity=-0.041 Sum_probs=29.9
Q ss_pred hhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHH
Q 008070 424 TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITA 460 (579)
Q Consensus 424 ~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~ 460 (579)
...|-.++..+...++.+++.++..|+...-+.-.++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iG 92 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIG 92 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHh
Confidence 3478888899999999999999999998776654443
No 367
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=20.65 E-value=1.3e+03 Score=26.26 Aligned_cols=168 Identities=17% Similarity=0.104 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhCCChhhhhHHhHHHHHHHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 008070 408 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPA 487 (579)
Q Consensus 408 ~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (579)
..|+-..+.. +...-.++-+......+.++++.++.-.+.|+.-...-.- ....+++++++.+++-........+.
T Consensus 142 ~~~f~~~~~~-~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~---tL~vl~ig~~~~~l~~~~l~~lr~~~ 217 (709)
T COG2274 142 LSWFIPLLFK-YRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRS---TLTVLAIGLLLAALFEALLRLLRTYL 217 (709)
T ss_pred hHhHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchh---HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHh-hhhhhhhhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh------------cCChHHHH
Q 008070 488 MAVLCMACSQ-GSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ------------RGSWDDVF 554 (579)
Q Consensus 488 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig~~l~g~l~~------------~~g~~~~~ 554 (579)
.....-=+.. ....+..-.+..-...+..+..|...+-.+-...+-.++...+.+.+.| .++|..++
T Consensus 218 ~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~l 297 (709)
T COG2274 218 IAHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVRELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTL 297 (709)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhhcCcccCC
Q 008070 555 KVAVVLYIIGTLVWNLFATGERVLE 579 (579)
Q Consensus 555 ~~~~~~~~l~~~~~~~~~~~~~~~~ 579 (579)
+..+.+.+..++.+++...-++..+
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~ 322 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTR 322 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
No 368
>PTZ00370 STEVOR; Provisional
Probab=20.52 E-value=2.7e+02 Score=27.24 Aligned_cols=37 Identities=14% Similarity=0.059 Sum_probs=17.5
Q ss_pred HHHHHHHhhcccCcchHHHHhhHHHHHHHHHHHhhhc
Q 008070 313 GLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 349 (579)
Q Consensus 313 gp~i~~~l~~~~gwr~~f~i~~~~~li~~~l~~~~~~ 349 (579)
|+..+.......+|-.+-+++.++.++++++.+++.+
T Consensus 244 gtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 244 GTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred chHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333345555555555555555555444443
No 369
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=20.34 E-value=5.4e+02 Score=21.84 Aligned_cols=46 Identities=20% Similarity=0.106 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhh-cCCcHHHHHHHHHHHHHHHHHHh
Q 008070 209 VLLCFSAFLLCNMDRIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPV 255 (579)
Q Consensus 209 ~~l~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ll~~~ 255 (579)
.+...+.-....+.+...+.+.++ ++.+..+ ...++..+++++.++
T Consensus 7 ~l~V~~GG~~GA~~Ry~l~~~~~~~~~~~fP~-gTl~VNi~GsfllG~ 53 (128)
T PRK14199 7 AIIVGLGGFIGASLRYLISIFAAKMFNGNFPY-GTLIVNIVGALLIGF 53 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCch-HHHHHHHHHHHHHHH
Confidence 333444444444555555544443 3433221 233344444444443
Done!