Query 008073
Match_columns 578
No_of_seqs 155 out of 695
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 19:07:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008073.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008073hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 9E-128 2E-132 1054.3 55.9 557 4-574 21-597 (612)
2 PLN02247 indole-3-acetic acid- 100.0 2E-125 4E-130 1038.2 57.1 559 4-574 10-594 (606)
3 PLN02249 indole-3-acetic acid- 100.0 2E-119 5E-124 999.0 57.2 560 4-575 20-587 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 2E-114 4E-119 958.2 44.7 510 7-560 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 99.9 3.1E-25 6.7E-30 235.8 31.6 399 10-558 14-436 (438)
6 TIGR03335 F390_ftsA coenzyme F 99.9 4.7E-24 1E-28 233.0 25.0 388 16-534 12-432 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 4.6E-21 1E-25 207.6 26.4 382 16-533 6-410 (422)
8 TIGR02304 aden_form_hyp probab 99.8 3.5E-18 7.5E-23 185.1 25.6 318 16-480 22-377 (430)
9 PRK00174 acetyl-CoA synthetase 99.2 1.7E-08 3.6E-13 115.3 30.9 228 294-567 366-633 (637)
10 TIGR02188 Ac_CoA_lig_AcsA acet 99.1 5.4E-08 1.2E-12 110.8 32.0 227 294-565 357-624 (625)
11 PRK06060 acyl-CoA synthetase; 99.1 3.9E-08 8.5E-13 113.7 28.5 130 294-446 259-410 (705)
12 PLN02654 acetate-CoA ligase 99.0 4E-07 8.6E-12 104.9 32.7 225 295-565 397-662 (666)
13 PRK06334 long chain fatty acid 99.0 3E-08 6.4E-13 111.1 22.8 131 294-446 298-455 (539)
14 TIGR01734 D-ala-DACP-lig D-ala 99.0 9.1E-08 2E-12 105.3 26.0 131 293-446 256-418 (502)
15 PRK09274 peptide synthase; Pro 99.0 1.7E-07 3.7E-12 104.8 28.0 139 294-446 287-465 (552)
16 PRK04319 acetyl-CoA synthetase 99.0 2.4E-07 5.2E-12 104.2 27.7 129 294-446 322-477 (570)
17 PLN02574 4-coumarate--CoA liga 99.0 7.4E-08 1.6E-12 108.2 23.3 131 294-445 318-474 (560)
18 PRK04813 D-alanine--poly(phosp 99.0 1.5E-07 3.2E-12 103.4 24.8 131 293-446 258-420 (503)
19 PRK07514 malonyl-CoA synthase; 99.0 9.6E-08 2.1E-12 105.1 23.3 132 292-446 266-422 (504)
20 PRK09088 acyl-CoA synthetase; 99.0 1.3E-07 2.9E-12 103.8 24.3 129 294-445 251-405 (488)
21 PRK06187 long-chain-fatty-acid 99.0 7.5E-08 1.6E-12 106.0 22.4 132 292-445 278-439 (521)
22 PRK05677 long-chain-fatty-acid 98.9 7.3E-08 1.6E-12 108.2 22.4 128 294-445 325-477 (562)
23 PRK13295 cyclohexanecarboxylat 98.9 1.6E-07 3.4E-12 105.1 24.6 157 293-481 310-491 (547)
24 TIGR02316 propion_prpE propion 98.9 1.3E-06 2.9E-11 99.6 32.3 130 294-446 353-517 (628)
25 PRK06155 crotonobetaine/carnit 98.9 1.4E-07 3E-12 105.7 23.5 122 304-446 300-445 (542)
26 PRK10524 prpE propionyl-CoA sy 98.9 6.3E-07 1.4E-11 102.2 29.2 228 295-565 355-625 (629)
27 PRK07529 AMP-binding domain pr 98.9 1.5E-07 3.2E-12 107.6 24.1 133 294-445 332-489 (632)
28 PRK07788 acyl-CoA synthetase; 98.9 2.5E-07 5.4E-12 103.5 25.2 129 294-446 322-472 (549)
29 PRK05605 long-chain-fatty-acid 98.9 2.4E-07 5.1E-12 104.2 23.6 159 294-482 335-518 (573)
30 PRK06164 acyl-CoA synthetase; 98.9 3.4E-07 7.3E-12 102.0 24.5 108 321-446 319-451 (540)
31 TIGR03205 pimA dicarboxylate-- 98.9 4.7E-07 1E-11 101.1 25.5 131 294-446 311-466 (541)
32 PRK07656 long-chain-fatty-acid 98.9 3E-07 6.4E-12 101.3 23.5 129 294-445 280-436 (513)
33 PRK03584 acetoacetyl-CoA synth 98.9 9.8E-07 2.1E-11 101.2 28.6 224 301-565 386-648 (655)
34 PRK06145 acyl-CoA synthetase; 98.9 2.3E-07 5E-12 102.1 22.5 131 294-446 263-418 (497)
35 PRK08314 long-chain-fatty-acid 98.9 5.4E-07 1.2E-11 100.4 24.9 131 294-446 304-461 (546)
36 PRK08316 acyl-CoA synthetase; 98.8 6E-07 1.3E-11 99.1 24.8 118 309-446 300-440 (523)
37 PRK08974 long-chain-fatty-acid 98.8 7.1E-07 1.5E-11 100.1 25.1 128 295-446 325-477 (560)
38 PRK07786 long-chain-fatty-acid 98.8 1E-06 2.2E-11 98.5 25.9 125 301-445 293-443 (542)
39 PRK05852 acyl-CoA synthetase; 98.8 6.8E-07 1.5E-11 99.6 23.5 131 293-445 293-452 (534)
40 PRK07059 Long-chain-fatty-acid 98.8 3.7E-07 8.1E-12 102.2 21.4 124 302-446 331-480 (557)
41 PLN02330 4-coumarate--CoA liga 98.8 5.3E-07 1.1E-11 100.9 22.1 119 309-446 317-462 (546)
42 PRK13382 acyl-CoA synthetase; 98.8 3.8E-07 8.2E-12 102.0 20.9 129 294-446 311-461 (537)
43 TIGR01733 AA-adenyl-dom amino 98.8 4.4E-07 9.5E-12 96.8 20.6 130 294-445 233-399 (408)
44 PRK06839 acyl-CoA synthetase; 98.8 8.6E-07 1.9E-11 97.3 23.0 128 294-446 263-416 (496)
45 PRK08633 2-acyl-glycerophospho 98.8 1.4E-06 2.9E-11 105.9 26.8 131 293-446 896-1064(1146)
46 TIGR01217 ac_ac_CoA_syn acetoa 98.8 1.5E-06 3.3E-11 99.7 25.5 156 385-565 461-646 (652)
47 PRK07768 long-chain-fatty-acid 98.8 2.3E-06 4.9E-11 95.6 26.2 129 382-532 380-527 (545)
48 PRK07867 acyl-CoA synthetase; 98.8 6.9E-07 1.5E-11 99.8 22.0 121 303-445 272-425 (529)
49 COG0318 CaiC Acyl-CoA syntheta 98.8 8.4E-07 1.8E-11 99.5 22.2 127 300-446 293-446 (534)
50 PRK12406 long-chain-fatty-acid 98.8 1.2E-06 2.5E-11 97.0 23.1 127 295-445 271-423 (509)
51 TIGR03208 cyc_hxne_CoA_lg cycl 98.8 1.3E-06 2.9E-11 97.4 23.6 128 294-445 309-461 (538)
52 PLN02246 4-coumarate--CoA liga 98.7 1E-06 2.2E-11 98.3 22.3 129 295-445 298-456 (537)
53 PRK07787 acyl-CoA synthetase; 98.7 2.5E-06 5.4E-11 93.6 24.6 129 294-445 240-395 (471)
54 PRK07470 acyl-CoA synthetase; 98.7 3.7E-06 8.1E-11 93.4 26.2 129 293-445 278-438 (528)
55 PRK10252 entF enterobactin syn 98.7 6.6E-07 1.4E-11 110.2 21.7 129 294-446 716-882 (1296)
56 PRK12583 acyl-CoA synthetase; 98.7 5.9E-06 1.3E-10 92.3 27.6 157 294-481 316-500 (558)
57 PLN03051 acyl-activating enzym 98.7 6.3E-06 1.4E-10 91.4 27.3 41 401-445 358-401 (499)
58 PRK07769 long-chain-fatty-acid 98.7 3.3E-06 7.1E-11 96.4 25.6 60 382-446 412-508 (631)
59 COG0365 Acs Acyl-coenzyme A sy 98.7 7.5E-06 1.6E-10 91.2 27.1 186 292-527 287-501 (528)
60 PRK07638 acyl-CoA synthetase; 98.7 3.5E-07 7.6E-12 100.5 16.7 125 302-446 258-406 (487)
61 PRK05851 long-chain-fatty-acid 98.7 2.7E-06 5.9E-11 94.8 23.6 59 383-446 367-440 (525)
62 PRK10946 entE enterobactin syn 98.7 1.2E-06 2.7E-11 97.7 20.8 128 294-445 299-453 (536)
63 PRK08751 putative long-chain f 98.7 3E-06 6.6E-11 94.9 23.3 130 294-446 328-482 (560)
64 PRK05850 acyl-CoA synthetase; 98.7 4.8E-06 1E-10 93.7 24.5 127 381-532 390-550 (578)
65 TIGR02275 DHB_AMP_lig 2,3-dihy 98.7 2.6E-06 5.7E-11 94.7 22.1 129 295-446 299-453 (527)
66 PRK12492 long-chain-fatty-acid 98.7 1.7E-05 3.6E-10 89.2 28.7 127 295-445 333-485 (562)
67 PRK08315 AMP-binding domain pr 98.6 3.3E-06 7.2E-11 94.4 22.8 131 294-446 314-472 (559)
68 TIGR02262 benz_CoA_lig benzoat 98.6 7.6E-06 1.6E-10 90.5 25.3 117 309-446 292-429 (508)
69 PRK12467 peptide synthase; Pro 98.6 6.6E-07 1.4E-11 120.7 19.9 131 294-446 3350-3516(3956)
70 TIGR03098 ligase_PEP_1 acyl-Co 98.6 1.5E-05 3.3E-10 87.8 27.6 119 309-446 288-439 (515)
71 PRK13383 acyl-CoA synthetase; 98.6 2.3E-06 4.9E-11 95.0 20.8 128 294-445 291-440 (516)
72 PRK06710 long-chain-fatty-acid 98.6 3.7E-06 8.1E-11 94.3 22.6 129 295-446 323-476 (563)
73 PLN02860 o-succinylbenzoate-Co 98.6 8.4E-07 1.8E-11 99.8 17.2 58 385-446 382-459 (563)
74 COG1021 EntE Peptide arylation 98.6 1.5E-07 3.3E-12 98.3 9.9 117 309-446 319-459 (542)
75 PRK12467 peptide synthase; Pro 98.6 1.9E-06 4.1E-11 116.4 22.7 129 295-445 771-934 (3956)
76 PRK12316 peptide synthase; Pro 98.6 1.2E-06 2.5E-11 120.6 20.9 130 294-446 2260-2426(5163)
77 PRK08279 long-chain-acyl-CoA s 98.6 3.1E-06 6.8E-11 95.9 21.1 138 294-445 313-483 (600)
78 PRK06188 acyl-CoA synthetase; 98.6 6.4E-06 1.4E-10 91.5 22.7 128 294-445 280-437 (524)
79 TIGR03443 alpha_am_amid L-amin 98.6 3.1E-06 6.8E-11 105.1 21.7 41 401-445 679-722 (1389)
80 PRK03640 O-succinylbenzoic aci 98.6 1.1E-05 2.5E-10 88.2 23.7 60 382-445 326-404 (483)
81 PF00501 AMP-binding: AMP-bind 98.6 1.2E-06 2.5E-11 94.0 15.5 115 293-428 275-412 (417)
82 PRK05857 acyl-CoA synthetase; 98.6 6.4E-06 1.4E-10 92.2 22.0 60 382-445 368-446 (540)
83 PLN02736 long-chain acyl-CoA s 98.6 3.6E-06 7.8E-11 96.6 20.1 127 302-445 380-532 (651)
84 PTZ00237 acetyl-CoA synthetase 98.6 3E-06 6.4E-11 97.3 19.4 231 294-565 379-643 (647)
85 PLN02387 long-chain-fatty-acid 98.5 2.5E-06 5.5E-11 98.8 18.7 131 295-445 420-580 (696)
86 TIGR01923 menE O-succinylbenzo 98.5 6.4E-06 1.4E-10 88.9 20.5 55 387-445 291-364 (436)
87 PRK12316 peptide synthase; Pro 98.5 2.4E-06 5.3E-11 117.5 20.6 131 294-446 4808-4974(5163)
88 PRK13388 acyl-CoA synthetase; 98.5 9E-06 1.9E-10 91.1 21.8 123 309-445 277-424 (540)
89 PRK08008 caiC putative crotono 98.5 1.6E-05 3.5E-10 88.0 23.4 116 309-445 301-442 (517)
90 PLN03052 acetate--CoA ligase; 98.5 5.5E-05 1.2E-09 88.2 28.7 41 402-446 591-634 (728)
91 PRK08043 bifunctional acyl-[ac 98.5 1.4E-05 3.1E-10 92.8 23.8 42 401-446 592-636 (718)
92 PRK05691 peptide synthase; Val 98.5 1.4E-05 3E-10 109.1 26.9 131 294-446 1387-1550(4334)
93 COG1022 FAA1 Long-chain acyl-C 98.5 1.6E-06 3.5E-11 97.9 14.9 128 302-466 357-506 (613)
94 PRK07008 long-chain-fatty-acid 98.5 1.7E-05 3.6E-10 88.8 23.0 131 294-445 292-453 (539)
95 PRK05620 long-chain-fatty-acid 98.5 2.4E-05 5.2E-10 88.2 24.1 40 402-445 432-474 (576)
96 PRK05691 peptide synthase; Val 98.5 4.5E-06 9.8E-11 113.7 21.0 131 294-446 3982-4147(4334)
97 PTZ00342 acyl-CoA synthetase; 98.5 7.4E-06 1.6E-10 95.5 19.4 129 295-445 461-615 (746)
98 PRK06087 short chain acyl-CoA 98.4 2.8E-05 6.1E-10 86.9 23.3 128 295-445 302-454 (547)
99 PRK07824 O-succinylbenzoic aci 98.4 2.2E-05 4.8E-10 82.9 21.1 41 401-446 235-278 (358)
100 PRK08308 acyl-CoA synthetase; 98.4 3.6E-05 7.8E-10 83.0 22.7 56 385-446 278-336 (414)
101 PRK06178 acyl-CoA synthetase; 98.4 6E-05 1.3E-09 84.7 24.0 118 309-445 341-486 (567)
102 PRK06814 acylglycerophosphoeth 98.4 1.6E-05 3.5E-10 96.9 20.6 124 295-446 907-1055(1140)
103 PLN03102 acyl-activating enzym 98.4 9.7E-06 2.1E-10 91.7 17.1 56 386-445 390-464 (579)
104 PRK06018 putative acyl-CoA syn 98.3 7.5E-05 1.6E-09 83.5 23.5 55 387-445 383-454 (542)
105 PLN02861 long-chain-fatty-acid 98.3 1.6E-05 3.4E-10 91.6 18.0 127 302-445 387-538 (660)
106 PRK08180 feruloyl-CoA synthase 98.3 1.7E-05 3.7E-10 90.4 17.3 44 402-445 442-491 (614)
107 PRK12582 acyl-CoA synthetase; 98.2 1.6E-05 3.4E-10 90.8 15.2 57 384-440 419-496 (624)
108 PLN02430 long-chain-fatty-acid 98.2 5.3E-05 1.1E-09 87.4 19.4 58 384-445 461-538 (660)
109 PTZ00216 acyl-CoA synthetase; 98.2 7.3E-05 1.6E-09 86.8 20.0 58 384-445 503-581 (700)
110 KOG1177 Long chain fatty acid 98.1 1.5E-05 3.3E-10 85.5 10.5 60 382-445 426-505 (596)
111 PRK13390 acyl-CoA synthetase; 98.1 0.00017 3.7E-09 79.6 18.9 126 295-445 270-423 (501)
112 PRK12476 putative fatty-acid-- 98.1 0.00013 2.8E-09 83.1 17.8 129 381-532 422-588 (612)
113 PRK08276 long-chain-fatty-acid 98.0 0.00026 5.7E-09 78.0 19.2 128 294-446 261-414 (502)
114 PRK07798 acyl-CoA synthetase; 97.9 0.0003 6.6E-09 77.7 17.5 127 301-446 299-453 (533)
115 PRK13391 acyl-CoA synthetase; 97.9 0.00059 1.3E-08 75.6 19.1 126 295-446 275-427 (511)
116 PRK09192 acyl-CoA synthetase; 97.9 0.00036 7.8E-09 78.8 17.5 60 382-446 405-483 (579)
117 PRK07868 acyl-CoA synthetase; 97.8 0.0004 8.7E-09 83.8 17.4 139 295-446 720-881 (994)
118 PF04443 LuxE: Acyl-protein sy 97.8 0.0014 3E-08 70.3 19.3 106 309-438 242-362 (365)
119 TIGR02372 4_coum_CoA_lig 4-cou 97.8 0.0012 2.6E-08 71.3 18.0 42 401-446 276-320 (386)
120 PLN02614 long-chain acyl-CoA s 97.8 0.00011 2.3E-09 84.9 10.3 131 295-445 386-541 (666)
121 KOG1256 Long-chain acyl-CoA sy 97.7 0.0012 2.5E-08 74.8 17.5 132 292-445 416-572 (691)
122 KOG1175 Acyl-CoA synthetase [L 97.7 0.0031 6.7E-08 71.4 20.5 229 295-566 359-623 (626)
123 PRK07445 O-succinylbenzoic aci 97.6 0.00077 1.7E-08 74.0 13.6 58 385-446 298-369 (452)
124 KOG1176 Acyl-CoA synthetase [L 97.5 0.0031 6.7E-08 70.8 16.7 131 293-446 297-453 (537)
125 KOG1179 Very long-chain acyl-C 97.4 0.0036 7.8E-08 68.9 15.1 222 305-554 365-623 (649)
126 KOG1180 Acyl-CoA synthetase [L 97.2 0.067 1.5E-06 59.1 21.9 141 302-468 406-574 (678)
127 PRK08162 acyl-CoA synthetase; 97.2 0.017 3.6E-07 64.5 18.1 56 387-446 387-461 (545)
128 PRK09029 O-succinylbenzoic aci 97.0 0.012 2.6E-07 64.2 14.5 41 401-446 333-376 (458)
129 PF14535 AMP-binding_C_2: AMP- 96.8 0.0013 2.9E-08 56.7 3.8 84 431-533 1-84 (96)
130 PLN02479 acetate-CoA ligase 96.7 0.0066 1.4E-07 68.4 10.0 55 387-445 401-474 (567)
131 COG1020 EntF Non-ribosomal pep 87.9 2.7 5.9E-05 48.0 10.1 59 382-444 561-639 (642)
132 PRK09188 serine/threonine prot 83.2 10 0.00022 40.9 11.0 40 401-446 210-252 (365)
133 PRK07445 O-succinylbenzoic aci 68.5 6.4 0.00014 43.2 4.7 27 89-116 119-145 (452)
134 PRK09029 O-succinylbenzoic aci 63.7 7.3 0.00016 42.4 3.9 27 89-116 134-160 (458)
135 PF11454 DUF3016: Protein of u 59.5 16 0.00035 33.9 4.7 43 383-427 47-95 (141)
136 PRK12476 putative fatty-acid-- 55.1 15 0.00033 41.8 4.8 27 89-116 192-218 (612)
137 PF07311 Dodecin: Dodecin; In 53.0 34 0.00073 27.6 5.0 48 432-480 13-60 (66)
138 PTZ00237 acetyl-CoA synthetase 52.3 9.6 0.00021 44.0 2.5 26 89-115 253-278 (647)
139 PLN02614 long-chain acyl-CoA s 52.1 11 0.00023 43.8 2.9 29 88-117 221-249 (666)
140 PRK09192 acyl-CoA synthetase; 48.8 18 0.00038 40.9 3.9 29 88-117 174-202 (579)
141 PF01797 Y1_Tnp: Transposase I 45.2 1.2E+02 0.0025 26.5 7.9 43 429-482 18-60 (121)
142 PLN02479 acetate-CoA ligase 41.4 18 0.00039 40.7 2.5 22 94-116 199-220 (567)
143 PRK07798 acyl-CoA synthetase; 40.9 17 0.00038 39.9 2.3 22 94-116 167-188 (533)
144 PRK08162 acyl-CoA synthetase; 38.8 23 0.0005 39.3 2.9 24 92-116 184-207 (545)
145 KOG1176 Acyl-CoA synthetase [L 33.9 32 0.0007 39.0 3.0 26 90-116 184-209 (537)
146 KOG1179 Very long-chain acyl-C 32.9 28 0.00062 39.3 2.2 31 384-414 484-520 (649)
147 PRK08276 long-chain-fatty-acid 30.4 43 0.00093 36.7 3.2 24 92-116 142-165 (502)
148 TIGR02778 ligD_pol DNA polymer 30.1 42 0.00092 34.0 2.8 51 86-140 142-193 (245)
149 cd04861 LigD_Pol_like LigD_Pol 28.2 47 0.001 33.3 2.7 51 86-140 126-177 (227)
150 cd04865 LigD_Pol_like_2 LigD_P 27.8 48 0.001 33.3 2.7 51 86-140 127-178 (228)
151 PRK13390 acyl-CoA synthetase; 26.8 38 0.00081 37.2 2.0 19 93-112 151-169 (501)
152 PF09926 DUF2158: Uncharacteri 26.2 61 0.0013 24.9 2.4 19 402-423 1-19 (53)
153 cd04862 PaeLigD_Pol_like PaeLi 24.8 59 0.0013 32.7 2.7 51 86-140 126-177 (227)
154 PF12627 PolyA_pol_RNAbd: Prob 24.8 1.2E+02 0.0026 23.3 4.0 41 252-298 21-61 (64)
155 cd04866 LigD_Pol_like_3 LigD_P 24.8 59 0.0013 32.6 2.7 51 86-140 121-173 (223)
156 cd04863 MtLigD_Pol_like MtLigD 23.4 65 0.0014 32.4 2.7 51 86-140 130-181 (231)
157 cd04864 LigD_Pol_like_1 LigD_P 22.7 69 0.0015 32.2 2.7 51 86-140 127-178 (228)
158 COG5475 Uncharacterized small 21.5 93 0.002 24.2 2.5 24 402-428 5-28 (60)
159 PF12690 BsuPI: Intracellular 21.0 72 0.0016 26.6 2.1 25 383-407 20-46 (82)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=9.1e-128 Score=1054.32 Aligned_cols=557 Identities=32% Similarity=0.609 Sum_probs=514.7
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCChhhhhh-hcCCCCCCChhhHhhcCCCCchhhhHHHHHHHhCCCCCCC
Q 008073 4 DEDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPY-LSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQN 82 (578)
Q Consensus 4 ~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~-f~~i~~~~s~~df~~~vPl~~Yed~~pyieR~~~Ge~~~~ 82 (578)
+++.++.+|+.++||.++|+++|++||++|++|+|||+| |++| +++++||++|||++|||++|||+||++||.
T Consensus 21 ~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i---~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~--- 94 (612)
T PLN02620 21 NKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGR---TDRETFKKVMPVITYEDIQPDINRIANGDT--- 94 (612)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCC---CCHHHHHHhCCCccHHHhHHHHHHHHcCCC---
Confidence 366789999999999999999999999999999999999 9999 999999999999999999999999999987
Q ss_pred CCCcccCCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCccccCCCcE
Q 008073 83 DQPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFK 162 (578)
Q Consensus 83 ~~~vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip 162 (578)
++|||++||.+|+.|||||+|++|+||+|+++++.++. ++.++..+++++ .|++..||.|||++.+.+.+|++|||
T Consensus 95 -s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~--~~~~~~~~~~~~-~p~l~~Gk~~~~~~~~~~~~T~~Gip 170 (612)
T PLN02620 95 -SPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSL--LYSLLMPVMSQF-VPGLEKGKGMYFLFIKSEAKTPGGLV 170 (612)
T ss_pred -CCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHH--HHHHHHHHHHhh-CCCcccCcEEEEEecccCccCCCCcc
Confidence 79999999999999999998899999999999998665 567777777775 48999999999999999999999999
Q ss_pred EeecccccccCCCc-cc-c-cccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHH
Q 008073 163 VMAASAFPLQGSSN-EN-L-SQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQ 239 (578)
Q Consensus 163 ~G~~S~~~~~~~~~-~~-~-~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~ 239 (578)
+|++|+..++ +.. +. + ++...|++|.+++.++|..+++||||||+|.++++|..++++|+++|+.++++|+++|++
T Consensus 171 ~g~~st~~y~-s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~ 249 (612)
T PLN02620 171 ARPVLTSYYK-SSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTL 249 (612)
T ss_pred cccccchhhh-hhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHH
Confidence 9999999888 443 22 2 445689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCchHHHHHHHHHHh
Q 008073 240 LCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYA 319 (578)
Q Consensus 240 l~~dI~~gti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~ 319 (578)
||+||++|++++++++|.+|++++++| +|||++|++|+++|.+.+|.||+++|||||++|+||++|+|++|.+.|+.|+
T Consensus 250 L~~DI~~G~ls~~itd~~~R~av~~~L-~p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~ 328 (612)
T PLN02620 250 LCRDIRTGTIDSQITDPSVREAVMKIL-KPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYS 328 (612)
T ss_pred HHHHHhcCCCCccCCCHHHHHHHHhhc-CCCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHc
Confidence 999999999999999999999999999 7999999999999999899999999999999999999999999999999999
Q ss_pred CCCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCc------------cccCCceeeccccCCCc
Q 008073 320 GEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN------------EAVGEETVDFSGVEIGK 387 (578)
Q Consensus 320 g~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~------------~~~~~~~l~~~ele~G~ 387 (578)
||+|+++.+|+||||+||+|++|.|+++...|.++|+.+||||||.++.+. +.+++++|+++|||.|+
T Consensus 329 gglpl~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~ 408 (612)
T PLN02620 329 NGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQ 408 (612)
T ss_pred CCCccccccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHccCCC
Confidence 999999999999999999999999988889999999999999999875210 13457789999999999
Q ss_pred eEEEEEccCCceeccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEe
Q 008073 388 MYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGY 464 (578)
Q Consensus 388 ~YelVvTt~~GLyRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~ 464 (578)
.|||||||.+||||||+||||+|+||||++|+|+|++|.+. |.|||++|++|+.||.+|...|.+ .|+.|+||++.
T Consensus 409 ~YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~-~~~~l~dyts~ 487 (612)
T PLN02620 409 EYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVP-FDASLTEYTSY 487 (612)
T ss_pred eEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcc-cCceeeeEEec
Confidence 99999999999999999999999999999999999999998 999999999999999999987632 48999999999
Q ss_pred ecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHHhhhcC-CCCCcEEEEeCCCcHHHHHHHHHHcCC
Q 008073 465 TNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRG-EISPLSVSIVKPGTFDRLLQVAIEKGA 543 (578)
Q Consensus 465 ~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g-~l~p~~v~~v~~G~f~~~~~~~~~~G~ 543 (578)
++.+..||||++|||+..... ...+++.+++||..||++||.+|+.+|..+ .|+|++|++|++|+|+.++++++++|+
T Consensus 488 ~d~~~~PghYvl~~El~~~~~-~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~ 566 (612)
T PLN02620 488 ADTSTIPGHYVLFWELCLNGS-TPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGA 566 (612)
T ss_pred cccCCCCCceEEEEEEecCCC-CCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCC
Confidence 998778999999999841110 124667889999999999999999999987 599999999999999999999999999
Q ss_pred CCCCCCCCcccCCHhHHHHHhccceEEEecc
Q 008073 544 PASQYKPPKIVRNREIVEFMEGCSLVTVRLD 574 (578)
Q Consensus 544 ~~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~ 574 (578)
+.+|||+|||+++++++++|+++|++..--.
T Consensus 567 s~~QyK~Pr~v~~~~~~~~l~~~v~~~~~s~ 597 (612)
T PLN02620 567 SINQYKTPRCVKFAPIIELLNSRVVSNYFSP 597 (612)
T ss_pred ccccccCceEecCHHHHHHHHhhhheeeccc
Confidence 9999999999999999999999999876543
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.1e-125 Score=1038.17 Aligned_cols=559 Identities=32% Similarity=0.621 Sum_probs=510.0
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCChhhhhhhcCCCCCCChhhHhhcCCCCchhhhHHHHHHHhCCCCCCCC
Q 008073 4 DEDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPYLSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQND 83 (578)
Q Consensus 4 ~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~f~~i~~~~s~~df~~~vPl~~Yed~~pyieR~~~Ge~~~~~ 83 (578)
+++.++.+|+.++||.++|+++|++||++|++|+|||+|+.+| +++++||++|||++|||++|||+||++||.
T Consensus 10 ~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~~i---~~~e~Fk~~VPv~~Yedl~pyI~Ri~~Ge~---- 82 (606)
T PLN02247 10 NEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLDGE---SDKQSFKNKVPVVNYEDIKPCIERIANGES---- 82 (606)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCccC---CCHHHHHHhCCCccHHHhHHHHHHHHcCCC----
Confidence 4778999999999999999999999999999999999994489 999999999999999999999999999998
Q ss_pred CCcccCCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCccccCCCcEE
Q 008073 84 QPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKV 163 (578)
Q Consensus 84 ~~vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~ 163 (578)
+.+++++||.+|+.|||||+|++|+||+|+++++++.. ++.++...++++ .|++..||.||+++.+++.+|++|||+
T Consensus 83 ~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~--~~~l~~~~~~~~-~p~l~~Gk~~~~~~~~~~~~T~~Gip~ 159 (606)
T PLN02247 83 SSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTF--FYNLLVPVMNKY-VDGLDQGKGMYLLFIKPEISTPSGLMA 159 (606)
T ss_pred CceeCCCCcceeeccCCCCCCceeEeeccHHHHHHHHH--HHHHHHHHHHhc-CCCcccCcEEEEEecCcCccCCCCccc
Confidence 44566999999999999998899999999999988555 566666666664 489989999999999999999999999
Q ss_pred eecccccccCCCc-ccc--cccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHHH
Q 008073 164 MAASAFPLQGSSN-ENL--SQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQL 240 (578)
Q Consensus 164 G~~S~~~~~~~~~-~~~--~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~l 240 (578)
|++|+.+++ +.+ +.+ .....|++|.+++.++|..+++||||||||.+++++..++|+|+++++.++++|+++|++|
T Consensus 160 g~~~t~y~~-s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L 238 (606)
T PLN02247 160 RPVLTSYYK-SSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKEL 238 (606)
T ss_pred ccccchhhc-cccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHH
Confidence 999999887 543 233 2236899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCchHHHHHHHHHHhC
Q 008073 241 CDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAG 320 (578)
Q Consensus 241 ~~dI~~gti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g 320 (578)
|+||++|++++++++|.+|+++...++.|+|++|++|+++|.+.+|.|++++|||||++|+||++|+|++|.++|+.|+|
T Consensus 239 ~~DI~~G~ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~g 318 (606)
T PLN02247 239 CSNIRTGCVSDWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSG 318 (606)
T ss_pred HHHHhcCCcccccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999999889999999999999988999999999999999999999999999999999999
Q ss_pred CCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCcc-----------------ccCCceeecccc
Q 008073 321 EVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNE-----------------AVGEETVDFSGV 383 (578)
Q Consensus 321 ~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~-----------------~~~~~~l~~~el 383 (578)
|+|+++.+|+||||+||+|++|.|+++...|.++|+.+||||||.++.+.+ .+++.+|+++||
T Consensus 319 glpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev 398 (606)
T PLN02247 319 GLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDV 398 (606)
T ss_pred CCceecccccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCceecHHHc
Confidence 999999999999999999999999888899999999999999998753100 234569999999
Q ss_pred CCCceEEEEEccCCceeccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEE
Q 008073 384 EIGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVE 460 (578)
Q Consensus 384 e~G~~YelVvTt~~GLyRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~ 460 (578)
|.|+.|||||||.+||||||+||||+|+||||++|+|+|+||.+. |.|||++|++++.||.+|...+.+ .++.|++
T Consensus 399 k~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~-~~~~l~d 477 (606)
T PLN02247 399 KVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEP-LGFLLTE 477 (606)
T ss_pred cCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcc-cCeeeee
Confidence 999999999999999999999999999999999999999999997 999999999999999999876632 5889999
Q ss_pred EEEeecCCCCCceEEEEEEeecCcc--ccCCCHHHHHHHHHHHHHHhChhHHHhhhcC-CCCCcEEEEeCCCcHHHHHHH
Q 008073 461 FAGYTNLESSPKKLMIFVEIREGCT--KLRDSVAILRRCCSSLEDAFGSIYKVQRDRG-EISPLSVSIVKPGTFDRLLQV 537 (578)
Q Consensus 461 f~~~~~~~~~~~~y~l~vE~~~~~~--~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g-~l~p~~v~~v~~G~f~~~~~~ 537 (578)
|++.++.++.||||+||||+..... ....+...+++||..||++||.+|+.+|..+ +|+|++|++|++|+|.+++++
T Consensus 478 ~ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~ 557 (606)
T PLN02247 478 YTSYADTSSIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDF 557 (606)
T ss_pred eecccccCCCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHH
Confidence 9999997778999999999952110 0123467789999999999999999999995 999999999999999999999
Q ss_pred HHHcCCCCCCCCCCcccCCHhHHHHHhccceEEEecc
Q 008073 538 AIEKGAPASQYKPPKIVRNREIVEFMEGCSLVTVRLD 574 (578)
Q Consensus 538 ~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~ 574 (578)
++++|++.+|||+|||+++++++++|+++|++..--.
T Consensus 558 ~~~~G~s~~Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~ 594 (606)
T PLN02247 558 CVSQGSSVNQYKTPRCIKSEEALKILDSRVIGRFFSK 594 (606)
T ss_pred HHHcCCCcccccCceEecCHHHHHHHHhhhheeeccc
Confidence 9999999999999999999999999999999876433
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.2e-119 Score=998.96 Aligned_cols=560 Identities=31% Similarity=0.589 Sum_probs=505.5
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCChhhhhh-hcCCCCCCChhhHhhcCCCCchhhhHHHHHHHhCCCCCCC
Q 008073 4 DEDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPY-LSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQN 82 (578)
Q Consensus 4 ~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~-f~~i~~~~s~~df~~~vPl~~Yed~~pyieR~~~Ge~~~~ 82 (578)
+++.++.+|+.++||+++|+++|++||++|++|+|||+| |++| +++++||++|||++|||++|||+||++||.
T Consensus 20 ~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i---~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~--- 93 (597)
T PLN02249 20 DVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGA---VDRKTFKSKVPVVTYEDLKTEIQRISNGDR--- 93 (597)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCC---CCHHHHHHhCCCccHHHhHHHHHHHHcCCC---
Confidence 367789999999999999999999999999999999999 9999 999999999999999999999999999988
Q ss_pred CCCcccCCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCccccCCCcE
Q 008073 83 DQPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFK 162 (578)
Q Consensus 83 ~~~vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip 162 (578)
++|||++||.+|+.|||||+|++|+||+|+++++......+..++ ..+.+ .|++..||.|++++.+.+.+|++|+|
T Consensus 94 -~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~-~~~l~~Gk~l~~~~~~~~~~t~gG~p 169 (597)
T PLN02249 94 -SPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLY-VPGLDKGKGLYFLFVKSESKTSGGLP 169 (597)
T ss_pred -CceeCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhcc-CCccccCcEEEEEeccccccCCCCCc
Confidence 569999999999999999999999999999999833332233333 33332 48888999999999999999999999
Q ss_pred EeecccccccCCCc-ccccccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHHHH
Q 008073 163 VMAASAFPLQGSSN-ENLSQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQLC 241 (578)
Q Consensus 163 ~G~~S~~~~~~~~~-~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~l~ 241 (578)
+|++++.+++ +.. +++.+...|++|.+++.+.|..+++||||||||.+++++..|++.||+.++.++++|+++|+++|
T Consensus 170 ~~~~~~~~~~-~~~f~~~~~~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~ 248 (597)
T PLN02249 170 ARPALTSYYK-SDHFRTSDYDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELA 248 (597)
T ss_pred cCcccccccc-ccccccccccccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHH
Confidence 9999998656 322 23445778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCchHHHHHHHHHHhCC
Q 008073 242 DDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGE 321 (578)
Q Consensus 242 ~dI~~gti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~ 321 (578)
+||++|+++.++++|.+|+.+..++|.|+|++|++++++|++..|.|++++|||||++|+||++|+|++|++.+++|+|+
T Consensus 249 ~dI~~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~ 328 (597)
T PLN02249 249 QDISTGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGG 328 (597)
T ss_pred HHHHhCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999878999999999999999999999999999999999999
Q ss_pred CCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCC-ccccCCceeeccccCCCceEEEEEccCCcee
Q 008073 322 VPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK-NEAVGEETVDFSGVEIGKMYEVVVTTYRGFY 400 (578)
Q Consensus 322 v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~-~~~~~~~~l~~~ele~G~~YelVvTt~~GLy 400 (578)
+++++++|+||||+||+|+++.|++++..|+++++++||||||.++.. ...+++.+|+++|||.|++|||||||.+|||
T Consensus 329 ~~~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLy 408 (597)
T PLN02249 329 LPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGALDETSLVELADVEVGKEYELVITTYAGLY 408 (597)
T ss_pred CccccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCcccCCCCcEecHHHcCCCCeEEEEEEccccee
Confidence 999999999999999999998888877899999999999999987531 1125678999999999999999999999999
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEE
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIF 477 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~ 477 (578)
||++||+|+|+||+|++|+|+|+||.++ +.|||++|+++..||.+|...++. .|+.|.||++..+.++.|+||++|
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~-~~~~v~eft~~~~~~~~p~Hyvl~ 487 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAE-QGTRVIEYTSYAETKTIPGHYVIY 487 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhh-cCceEEEeEEecCCCCCCCceEEE
Confidence 9999999999999999999999999998 999999999999999997654432 699999999977776669999999
Q ss_pred EEeecCcccc-CCCHHHHHHHHHHHHHHhChhHHHhhhcC-CCCCcEEEEeCCCcHHHHHHHHHHcCCCCCCCCCCcccC
Q 008073 478 VEIREGCTKL-RDSVAILRRCCSSLEDAFGSIYKVQRDRG-EISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIVR 555 (578)
Q Consensus 478 vE~~~~~~~~-~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g-~l~p~~v~~v~~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~ 555 (578)
||+....... ..+.+.+++||..++++||.+|+.+|..+ +|+|++|++|++|+|.+|+++++++|++.||+|+|||++
T Consensus 488 wei~~~~~~~~~~~~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~ 567 (597)
T PLN02249 488 WELLGRDQSNALPSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVS 567 (597)
T ss_pred EEEeccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeC
Confidence 9984210000 14567888999999999999999999886 999999999999999999999999999999999999999
Q ss_pred CHhHHHHHhccceEEEeccC
Q 008073 556 NREIVEFMEGCSLVTVRLDS 575 (578)
Q Consensus 556 ~~~~~~~l~~~~~~~~~~~~ 575 (578)
+++++++|+++|++......
T Consensus 568 ~~~~~~~l~~~~~~~~~~~~ 587 (597)
T PLN02249 568 LTPIMELLDSRVVSAHFSPS 587 (597)
T ss_pred CHHHHHHHHhhhheeecccc
Confidence 99999999999999776543
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=1.7e-114 Score=958.23 Aligned_cols=510 Identities=32% Similarity=0.560 Sum_probs=403.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhccCChhhhhh-hcCCCCCCChhh--HhhcCCCCchhhhHHHHHHHhCCCCCCCC
Q 008073 7 ILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPY-LSGCCAPIDAAT--YKRTVPLSCYDDYADHINQLAGGDHGQND 83 (578)
Q Consensus 7 ~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~-f~~i~~~~s~~d--f~~~vPl~~Yed~~pyieR~~~Ge~~~~~ 83 (578)
.+++|+++++||+++|+++|++||++|++|+|||+| |++| +|++| ||++|||++||||+||||||++||.
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i---~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge~---- 74 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGI---RSVEDESFRKRVPITDYEDYRPYIERIAEGEE---- 74 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S-------HHHHHHHHS--BEHHHHHHHHHHHHTT------
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCC---CCcchHHHHHhCCCccHHHHHHHHHHHhcCCC----
Confidence 479999999999999999999999999999999999 9999 99999 9999999999999999999999999
Q ss_pred CCcccCCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCc--eEEEEeccCccccCCC
Q 008073 84 QPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKH-DVNK--ILFFIYSDNKTTTKAG 160 (578)
Q Consensus 84 ~~vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~-~~gk--~l~~~~~~~~~~t~~G 160 (578)
+|||++||.+|..|||||++++|+||+|+++++.+++..+...+..++.++ .|.. ..|| .|.+.+.++..+|++|
T Consensus 75 -~vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~-~p~~~~~gk~~~l~~~~~~~~~~t~~G 152 (528)
T PF03321_consen 75 -NVLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRN-FPGLLFQGKSLYLSFSFAPPPLRTPGG 152 (528)
T ss_dssp -CCTSSS--SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHH-SSS--TTSE--EEEE------EE-TTS
T ss_pred -CCCCCCCCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceEEEeecCCCcccCCCC
Confidence 899999999999999999544999999999999977434555555445544 3666 4688 4444455788899999
Q ss_pred cEEeecccccccCCCcccccccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHHH
Q 008073 161 FKVMAASAFPLQGSSNENLSQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQL 240 (578)
Q Consensus 161 ip~G~~S~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~l 240 (578)
+|+|++|++.++ ... ..+..+|++|.+++.+.|..+++||||+|+|.+.+||+.|+++|+++|+.++++|+++|+++
T Consensus 153 i~~g~~s~~~~~-~~~--~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l 229 (528)
T PF03321_consen 153 IPIGSISGIPYR-MIP--PWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEEL 229 (528)
T ss_dssp -EEE-HHHHHHT---S--CCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred eEEecccccchh-hCh--HHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHh
Confidence 999999999988 321 12345899999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCchHHHHHHHHHHhC
Q 008073 241 CDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAG 320 (578)
Q Consensus 241 ~~dI~~gti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g 320 (578)
|+||++|+++ ++.|||+||++|+++|.+ + .|++++|||||++|+||++|+|.+|+++|++++|
T Consensus 230 ~~dI~~G~~~---------------~~~p~p~rA~~L~~~~~~-~-~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g 292 (528)
T PF03321_consen 230 VEDIRDGTLS---------------LLRPNPERAAELRAEFEK-G-RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFG 292 (528)
T ss_dssp HHHHHHTS-----------------C-S--HHHHHHHHHHHCC-S-TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHT
T ss_pred hHHhcCCccc---------------cCCCCHHHHHHHHHhhcc-c-CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcC
Confidence 9999999988 237999999999999998 5 8899999999999999999999999999999999
Q ss_pred CCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCC-ccccCCceeeccccCCCceEEEEEccCCce
Q 008073 321 EVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK-NEAVGEETVDFSGVEIGKMYEVVVTTYRGF 399 (578)
Q Consensus 321 ~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~-~~~~~~~~l~~~ele~G~~YelVvTt~~GL 399 (578)
++++++.+|+||||+||+|++++. ..|+++++++||||||.++.+ +..+++++++++|||+|++|||||||.+||
T Consensus 293 ~~~~~~~~y~ASEg~i~i~~~~~~----~~~~l~~~~~ffEFip~~~~~~~~~~~~~~l~~~ele~G~~YelviTt~~GL 368 (528)
T PF03321_consen 293 GVPIQSKGYGASEGFIGIPLDPED----PGYVLAPDSGFFEFIPVDEDEQNPSEQPKTLLLHELEVGEEYELVITTNSGL 368 (528)
T ss_dssp TS-EEE-EEEETTEEEEEES-CCC------EEE-TTSSEEEEEE-STT-------SSSEEGGG--TT-EEEEEEESTTS-
T ss_pred CCceeeccccccceEEEEecCCCC----CceEeecCCeEEEEEeccCCcccccCCCceecHHHhcCCCeEEEEEecccce
Confidence 999999999999999999998443 568899999999999998641 015779999999999999999999999999
Q ss_pred eccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeec-CCCCCceEE
Q 008073 400 YRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLM 475 (578)
Q Consensus 400 yRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~ 475 (578)
||||+||||+|+||+|++|+|+|+||.++ |.|||++|++|++||.+++. . +|+.+.+|++.++ .++.+|||+
T Consensus 369 yRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~--~--~~~~~~~f~~~~~~~~~~~~~Y~ 444 (528)
T PF03321_consen 369 YRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ--E--TGLELRDFTVAPDPSSGNPPHYV 444 (528)
T ss_dssp SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH--C--TT-EEEEEEEEEE--SSSSBEEE
T ss_pred eeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH--h--cCCceeeEEEEeecccCCCCceE
Confidence 99999999999999999999999999997 99999999999999999985 4 8999999999998 567899999
Q ss_pred EEEEeecCccccCCCHHHHHHHHHHHHHHh---ChhHHHhhhc-CCCCCcEEEEeCCCcHHHHHHHHHHc-CCCCCCCCC
Q 008073 476 IFVEIREGCTKLRDSVAILRRCCSSLEDAF---GSIYKVQRDR-GEISPLSVSIVKPGTFDRLLQVAIEK-GAPASQYKP 550 (578)
Q Consensus 476 l~vE~~~~~~~~~~~~~~l~~~~~~ld~~L---n~~Y~~~R~~-g~l~p~~v~~v~~G~f~~~~~~~~~~-G~~~~Q~K~ 550 (578)
+|||+... ++.++.|+..||++| |++|+.+|+. |+|+|++|++|++|+|.+|+++++++ |++.+|||+
T Consensus 445 ~~~e~~~~-------~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~ 517 (528)
T PF03321_consen 445 LFWELEGE-------PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKV 517 (528)
T ss_dssp EEEEECS--------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS---
T ss_pred EEEEeCCC-------chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeC
Confidence 99999642 457889999999999 9999999999 99999999999999999999999999 999999999
Q ss_pred CcccCCHhHH
Q 008073 551 PKIVRNREIV 560 (578)
Q Consensus 551 Pr~~~~~~~~ 560 (578)
|||++++++.
T Consensus 518 pr~~~~~~~~ 527 (528)
T PF03321_consen 518 PRLIRDREFV 527 (528)
T ss_dssp -SS--TCHHH
T ss_pred ccccCccccC
Confidence 9999999884
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.95 E-value=3.1e-25 Score=235.76 Aligned_cols=399 Identities=16% Similarity=0.156 Sum_probs=250.8
Q ss_pred HHHHHH-HhHHHHHHHHHHHHHHh-ccCChhhhhhhcCCCCC----CChhhHhhcCCCCchhhhHHHHH-HHhCCCCCCC
Q 008073 10 KLEDST-KNATRHQLETLQSILER-QSGVRYLQPYLSGCCAP----IDAATYKRTVPLSCYDDYADHIN-QLAGGDHGQN 82 (578)
Q Consensus 10 ~~e~~~-~~~~~~Q~~~L~~iL~~-~~~T~ygr~~f~~i~~~----~s~~df~~~vPl~~Yed~~pyie-R~~~Ge~~~~ 82 (578)
+.+.+. +...+.|++.|+.+++. .++++|+|+||++.++. ++.+|+. ++|+++.++++.... ++.+...
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~~~--- 89 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAVPK--- 89 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccccc---
Confidence 345555 77899999999999987 79999999998743333 8899999 799999999985555 7777655
Q ss_pred CCCcccCCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCccccCCCc
Q 008073 83 DQPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGF 161 (578)
Q Consensus 83 ~~~vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~-gk~l~~~~~~~~~~t~~Gi 161 (578)
+.+.++..||||| |+|+.+|+|.+-...+... ++..+.. .+... .|..+ ..+ .+...+|+
T Consensus 90 -------~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~----~aR~~~~----~g~~~gd~v~~-~~~--yGl~tgg~ 150 (438)
T COG1541 90 -------EEIVRIHASSGTT-GKPTVFGYTAKDIERWAEL----LARSLYS----AGVRKGDKVQN-AYG--YGLFTGGL 150 (438)
T ss_pred -------cceEEEEccCCCC-CCceeeecCHHHHHHHHHH----HHHHHHH----ccCCCCCEEEE-Eee--eccccCCc
Confidence 5566789999999 9999999999876554331 1122211 33444 44433 322 11112221
Q ss_pred EEeecccccccCCCcccccccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHHHH
Q 008073 162 KVMAASAFPLQGSSNENLSQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQLC 241 (578)
Q Consensus 162 p~G~~S~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~l~ 241 (578)
+..+. + ++ .-....|.-. -....++ +++
T Consensus 151 ------~~~~g-a---~r--ig~~vip~~~-----g~~~~~~-----------------------------------~l~ 178 (438)
T COG1541 151 ------GLHYG-A---ER--IGATVIPISG-----GNTERQL-----------------------------------ELM 178 (438)
T ss_pred ------hhHHH-H---Hh--hCEEEEccCC-----ccHHHHH-----------------------------------HHH
Confidence 00101 1 00 0000111100 0011111 122
Q ss_pred HHHHhcCCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCc---hHHHHHHHHHH
Q 008073 242 DDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS---MSQYCSKIKYY 318 (578)
Q Consensus 242 ~dI~~gti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~ 318 (578)
.|.. |. -+.+.| ..+..|.+...+. |+ .|=.++ +...+.|+ .+..++.|++.
T Consensus 179 ~df~----------~t------vI~~tp--s~~l~lae~~~~~---G~---~~~~~~-lk~~i~gaE~~see~R~~ie~~ 233 (438)
T COG1541 179 KDFK----------PT------VIAATP--SYLLYLAEEAEEE---GI---DPDKLS-LKKGIFGAEPWSEEMRKVIENR 233 (438)
T ss_pred HhcC----------Cc------EEEECh--HHHHHHHHHHHHc---CC---Chhhcc-eeEEEEecccCCHHHHHHHHHH
Confidence 2221 11 122233 3344455555543 21 122233 23445554 48888999999
Q ss_pred hCCCCccccccccCceee-eeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeeccccCCCceEEEEEccC-
Q 008073 319 AGEVPVLGGDYFASECYV-GINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY- 396 (578)
Q Consensus 319 ~g~v~~~~~~y~asEg~~-~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~- 396 (578)
|| ++.+ +.||+||++. | ..+|+... .++++.+..++|.++|++. ..|..|+.||||+||+
T Consensus 234 ~g-~~~~-diYGltE~~g~g---~~eC~~~~-glhi~eD~~~~Ei~dP~t~------------e~l~dge~GelV~T~L~ 295 (438)
T COG1541 234 FG-CKAF-DIYGLTEGFGPG---AGECTERN-GLHIWEDHFIFEIVDPETG------------EQLPDGERGELVITTLT 295 (438)
T ss_pred hC-Ccee-eccccccccCCc---cccccccc-CCCcchhhceeeeecCCcC------------ccCCCCCeeEEEEEecc
Confidence 96 8888 9999999954 4 24566554 4556777779999999874 3466999999999997
Q ss_pred ---CceeccccCCEEEEeeeeCCC----C-EEEEEeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee
Q 008073 397 ---RGFYRYRLGDIVKVVDFYNSS----P-QVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT 465 (578)
Q Consensus 397 ---~GLyRYr~GDvV~v~g~~~~~----P-~i~f~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~ 465 (578)
..|.||||||++.+....|.| | ..++.||.++ +.|.++++.+|+.++.+... +.. +|.+..
T Consensus 296 ~~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~-------~~~-~yqi~~ 367 (438)
T COG1541 296 KEGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE-------VTP-HYQIIL 367 (438)
T ss_pred ccCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC-------CCc-eEEEEE
Confidence 239999999999999876644 3 3489999999 89999999999999987532 222 888877
Q ss_pred cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHHhhhcCCCCCcEEEEeCCCcHHHHHHHHHHcCCCC
Q 008073 466 NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRGEISPLSVSIVKPGTFDRLLQVAIEKGAPA 545 (578)
Q Consensus 466 ~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~G~f~~~~~~~~~~G~~~ 545 (578)
...+...+..+-||..++. .......+++..+...+ +.-....++|.+|.+|+.++...
T Consensus 368 ~~~~~~d~L~V~vE~~~~~----~~~~~~~~~~~~l~~~~--------~~~~~~~~~v~~v~~g~l~r~~~--------- 426 (438)
T COG1541 368 TRNGGLDELTVRVELENEA----EELEDERRLAKKLIKNI--------KSELGVRVEVELVEPGELPRTEG--------- 426 (438)
T ss_pred ecCCCCceEEEEEEecCcc----cchHHHHHHHHHHHHHH--------HhhcCCceEEEEEeccceecccC---------
Confidence 6544456778889986420 11122222333343333 23345889999999999884321
Q ss_pred CCCCCCcccCCHh
Q 008073 546 SQYKPPKIVRNRE 558 (578)
Q Consensus 546 ~Q~K~Pr~~~~~~ 558 (578)
|.+|++..+.
T Consensus 427 ---K~krvvd~r~ 436 (438)
T COG1541 427 ---KAKRVVDKRK 436 (438)
T ss_pred ---ceeEEEEecc
Confidence 7778776543
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.93 E-value=4.7e-24 Score=233.05 Aligned_cols=388 Identities=12% Similarity=0.041 Sum_probs=218.9
Q ss_pred HhHHHHHHHHHHHHHHh-ccCChhhhhhhcCCCCC----CChhhHhhcCCCCchhhhHHHHHHHhCCCCCCCCCCcc--c
Q 008073 16 KNATRHQLETLQSILER-QSGVRYLQPYLSGCCAP----IDAATYKRTVPLSCYDDYADHINQLAGGDHGQNDQPLL--A 88 (578)
Q Consensus 16 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~f~~i~~~----~s~~df~~~vPl~~Yed~~pyieR~~~Ge~~~~~~~vl--~ 88 (578)
...++.|.+.|+++|+. .++++|+|++|++.++. ++.+||+ ++|+++.+|++..-.-. .+. -.++ .
T Consensus 12 ~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~----~~~~~~~ 84 (445)
T TIGR03335 12 GELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDD----FMFKSAD 84 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccc----cccccCC
Confidence 56789999999999997 58899999997432211 8899999 59999999997553100 000 0111 1
Q ss_pred CCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-ceEEEEeccCccccCCCcEEeecc
Q 008073 89 VDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVN-KILFFIYSDNKTTTKAGFKVMAAS 167 (578)
Q Consensus 89 ~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~g-k~l~~~~~~~~~~t~~Gip~G~~S 167 (578)
.+.+..+..||||| |+||.+++|.+.+..+.. .. ...+ .. .++..+ +.+. .++ .....+|.
T Consensus 85 ~~~i~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~--~~--~r~~-~~---~G~~~gD~vl~-~~~--~~~~~g~~------ 146 (445)
T TIGR03335 85 WKDIYTIHETSGTS-GTPKSFFLTWDDWKRYAE--KY--ARSF-VS---QGFTAGDRMVI-CAS--YGMNVGAN------ 146 (445)
T ss_pred HHHeEEEEeCCCCC-CCcceeeecHHHHHHHHH--HH--HHHH-HH---cCCCCCCeEEE-Eec--CCcchhHH------
Confidence 23455667899999 999999999886643221 11 1111 11 233333 3333 210 00000000
Q ss_pred cccccCCCcccccccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHHHHHHHHhc
Q 008073 168 AFPLQGSSNENLSQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQLCDDLENG 247 (578)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~~g 247 (578)
. ..+..+.++. .++.... . . ..++.|++.
T Consensus 147 --~-----------------------------~~~~~~~~Ga------~vi~~~~---~-------~----~~~~~i~~~ 175 (445)
T TIGR03335 147 --T-----------------------------MTLAAREVGM------SIIPEGK---C-------T----FPIRIIESY 175 (445)
T ss_pred --H-----------------------------HHHHHHHcCC------EEEcCCc---h-------h----HHHHHHHHh
Confidence 0 0000011110 0110000 0 0 012223322
Q ss_pred CCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCc---hHHHHHHHHHHhCCCCc
Q 008073 248 YPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS---MSQYCSKIKYYAGEVPV 324 (578)
Q Consensus 248 ti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~~g~v~~ 324 (578)
.... +.+.| -.+..|.+.+.+. |+- ...++++ .++.|+ ....++.+++.|| +++
T Consensus 176 ~~t~-------------l~~~p--s~ll~La~~~~~~---g~~-~~~~~lr---~ii~gGE~l~~~~r~~ie~~~g-~~v 232 (445)
T TIGR03335 176 RPTG-------------IVASV--FKLLRLARRMKAE---GID-PAESSIR---RLVVGGESFADESRNYVEELWG-CEV 232 (445)
T ss_pred CCCE-------------EEECH--HHHHHHHHHHHHc---CCC-cccCcce---EEEEcCCCCCHHHHHHHHHHhC-CcE
Confidence 2111 12222 2233344434332 221 1235666 334443 2455678888885 999
Q ss_pred cccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeeccccCCCceEEEEEccC--------
Q 008073 325 LGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-------- 396 (578)
Q Consensus 325 ~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~-------- 396 (578)
+ +.||+||+.++. .|... ..+++..+..++|++++++. + .|.+|+.+|||+|++
T Consensus 233 ~-~~YG~TE~~~~~----~c~~~-~g~h~~~d~~~vEIvDp~~~-------~-----~vp~Ge~GELvvT~L~~~~~r~~ 294 (445)
T TIGR03335 233 Y-NTYGSTEGTMCG----ECQAV-AGLHVPEDLVHLDVYDPRHQ-------R-----FLPDGECGRIVLTTLLKPGERCG 294 (445)
T ss_pred E-ecCChhhhhheE----EecCC-CCccccCCceEEEEEcCCCC-------C-----CCcCCCceEEEEEecCCCCccCC
Confidence 9 899999985442 34322 34666777789999997652 2 256899999999998
Q ss_pred CceeccccCCEEEEe-eeeCCC----CEEEEEeeCCC---ccccccCHHHHHHHHHHHH--HHhccccCceeEEEEEeec
Q 008073 397 RGFYRYRLGDIVKVV-DFYNSS----PQVEFVMRAPK---SSFEIISERDLMSAMESFQ--MMLRNVMAVEIVEFAGYTN 466 (578)
Q Consensus 397 ~GLyRYr~GDvV~v~-g~~~~~----P~i~f~gR~~~---l~gEkv~e~~v~~av~~~~--~~l~~~~g~~l~~f~~~~~ 466 (578)
..|+||||||++++. ...|.| |+|..+||.++ |+|.++++.+|+++|.+.. ..+ ++ +|.+..+
T Consensus 295 ~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~---~~----~~~~~~~ 367 (445)
T TIGR03335 295 SLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSL---TG----EYEAFLY 367 (445)
T ss_pred ceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCC---Cc----cEEEEEe
Confidence 239999999999974 355543 57877899998 9999999999999998741 212 23 7877664
Q ss_pred CCC-CCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHHhhh---cCCCCCcEEEEeCCCcHHHH
Q 008073 467 LES-SPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRD---RGEISPLSVSIVKPGTFDRL 534 (578)
Q Consensus 467 ~~~-~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~---~g~l~p~~v~~v~~G~f~~~ 534 (578)
... ....-.+.||...+ .....+++.+.+.+++...++..+. .+ .-.+.|.+|++|++++.
T Consensus 368 ~~~~~~~~~~v~~e~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 432 (445)
T TIGR03335 368 GEEEGEITLRVSLECEDK------DNCSIHDIQENFTGTFLKYKPELIGSYDEG-IFQILVNFTGPGELELH 432 (445)
T ss_pred cCCCCCceEEEEEEecCc------ccchHHHHHHHHHHHHhhhhhhhhhhhhcc-eEEEEEEEeCCCCcccc
Confidence 321 12345566776532 1122334444455542111111110 22 34578999999999743
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.88 E-value=4.6e-21 Score=207.63 Aligned_cols=382 Identities=14% Similarity=0.132 Sum_probs=213.1
Q ss_pred HhHHHHHHHHHHHHHHh-ccCChhhhhhhcCCCCC----CChhhHhhcCCCCchhhhHHHHHH-HhCCCCCCCCCCcccC
Q 008073 16 KNATRHQLETLQSILER-QSGVRYLQPYLSGCCAP----IDAATYKRTVPLSCYDDYADHINQ-LAGGDHGQNDQPLLAV 89 (578)
Q Consensus 16 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~f~~i~~~----~s~~df~~~vPl~~Yed~~pyieR-~~~Ge~~~~~~~vl~~ 89 (578)
.+.++.|.+.|+++|+. .++++|+|++|++.++. .|.+||+ ++|++++++++...+. +.... .
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~~~----------~ 74 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFAVP----------R 74 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccCCC----------h
Confidence 45788999999999998 48899999997532211 7899998 5999999999855421 22111 1
Q ss_pred CCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCccccCCCcEEeecccc
Q 008073 90 DPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKVMAASAF 169 (578)
Q Consensus 90 ~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~G~~S~~ 169 (578)
+.+.++..||||| |+||.+++|...+..+.. ... ..+.. .++..+..+...++ .....+|.
T Consensus 75 ~~~~~~~~TSGTT-G~Pk~v~~t~~~~~~~~~--~~~---~~~~~---~g~~~~d~~~~~~~--~~~~~~~~-------- 135 (422)
T TIGR02155 75 EQVVRIHASSGTT-GKPTVVGYTQNDIDTWSS--VVA---RSIRA---AGGRPGDLIHNAYG--YGLFTGGL-------- 135 (422)
T ss_pred HHcEEEEECCCCC-CCCeEeccCHHHHHHHHH--HHH---HHHHH---cCCCCCcEEEEccC--ccccchhH--------
Confidence 3345566899999 999999999876543221 111 11111 23332322221110 00000000
Q ss_pred cccCCCcccccccccccCCchhhcCCChhHHHHHHHHhccccCCccceee-ccchhhHHHHHHHHHHHHHHHHHHHHhcC
Q 008073 170 PLQGSSNENLSQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIF-SPYAIGLIGAFSFFESKWEQLCDDLENGY 248 (578)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~-~~f~~~ll~~~~~l~~~w~~l~~dI~~gt 248 (578)
. ..|..+.++. ..+. +.+ .-+.+++.|++..
T Consensus 136 --~---------------------------~~~~~~~~g~------~~~~~~~~-------------~~~~~~~~i~~~~ 167 (422)
T TIGR02155 136 --G---------------------------AHYGAEKLGC------TVVPISGG-------------QTEKQVQLIQDFK 167 (422)
T ss_pred --H---------------------------HHHHHHHcCc------EEEecCCC-------------CHHHHHHHHHHHC
Confidence 0 0010111110 0110 000 0022344444443
Q ss_pred CCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCc---hHHHHHHHHHHhCCCCcc
Q 008073 249 PCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS---MSQYCSKIKYYAGEVPVL 325 (578)
Q Consensus 249 i~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~~g~v~~~ 325 (578)
+.- +.|.|+ .+..|.+...+. |+-.. -+.++ .+++|+ ....++.+++.|| ++++
T Consensus 168 ~t~-------------l~~~Ps--~l~~L~~~~~~~---~~~~~-~~~lr---~i~~~ge~l~~~~~~~i~~~~g-~~v~ 224 (422)
T TIGR02155 168 PDI-------------IMVTPS--YMLNLLEELKRM---GIDPA-QTSLQ---VGIFGAEPWTNAMRKEIEARLG-MKAT 224 (422)
T ss_pred CCE-------------EEEcHH--HHHHHHHHHHHc---CCCcc-cCceE---EEEEeCCcCCHHHHHHHHHHhC-CceE
Confidence 221 222333 233343333322 21001 13454 334333 3566778888886 8988
Q ss_pred ccccccCcee---eeeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeeccccCCCceEEEEEccCCc----
Q 008073 326 GGDYFASECY---VGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYRG---- 398 (578)
Q Consensus 326 ~~~y~asEg~---~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~~G---- 398 (578)
+.||+||+. ++. .|......+++..+..+.|.+++++ + .++.+|+.+|||+|+...
T Consensus 225 -~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~eivd~~~-------g-----~~v~~Ge~Gelvvt~~~~~~~p 287 (422)
T TIGR02155 225 -DIYGLSEVIGPGVAM----ECVETQDGLHIWEDHFYPEIIDPHT-------G-----EVLPDGEEGELVFTTLTKEALP 287 (422)
T ss_pred -ecccchhhcCCceee----cccccCCCceEecCeeEEEEECCCC-------C-----CCCCCCCeeEEEEecCCccccc
Confidence 899999962 332 2321123455556667889998654 2 235689999999998532
Q ss_pred eeccccCCEEEEeeeeC--CCCEE-EEEeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCc
Q 008073 399 FYRYRLGDIVKVVDFYN--SSPQV-EFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPK 472 (578)
Q Consensus 399 LyRYr~GDvV~v~g~~~--~~P~i-~f~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~ 472 (578)
+.||+|||++++.. .| ..|++ .|+||.++ +.|+++++.+|+.++.+. .++. ..|.+..+..+.+-
T Consensus 288 ~~ry~TGDl~~~~~-~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~-------~~v~-~~~q~~~~~~~~~~ 358 (422)
T TIGR02155 288 VIRYRTRDLTRLLP-GTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKM-------DELS-PHYQLELTRNGHMD 358 (422)
T ss_pred eeeEEcCcEEEEEC-CCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhC-------cCcC-CCEEEEEEcCCCcc
Confidence 67999999999865 22 23444 79999998 889999999999988764 1221 14665554322233
Q ss_pred eEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHHhhhcCCCCCcEEEEeCCCcHHH
Q 008073 473 KLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRGEISPLSVSIVKPGTFDR 533 (578)
Q Consensus 473 ~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~G~f~~ 533 (578)
...++||...+.. ........+.++++|.+.+ |..- -..+.|.++..|+|++
T Consensus 359 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~i~~~~-------~~~~-~~~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 359 ELTLKVELKPESY-TLRLHEQASLLAGEIQHTI-------KQEV-GVSMDVHLVEPGSLPR 410 (422)
T ss_pred EEEEEEEEecCcc-cccchHHHHHHHHHHHHHH-------Hhcc-CcEEEEEEECCCCccC
Confidence 6678888753210 0011222333455565555 3221 2236799999999873
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.81 E-value=3.5e-18 Score=185.11 Aligned_cols=318 Identities=17% Similarity=0.183 Sum_probs=194.0
Q ss_pred HhHHHHHHHHHHHHHHh-ccCChhhhhhhcCCCCCCChhhHhhcCCCCchhhhHHHHHHHhCCCCCCCCCCc----c---
Q 008073 16 KNATRHQLETLQSILER-QSGVRYLQPYLSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQNDQPL----L--- 87 (578)
Q Consensus 16 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~f~~i~~~~s~~df~~~vPl~~Yed~~pyieR~~~Ge~~~~~~~v----l--- 87 (578)
...++.|++.|+++|+. ..+++|+|++ .++ +++ ++|+.+++++....+++....- .. +.. +
T Consensus 22 ~~l~~~Q~~rL~~ll~~a~~~sPfYr~~-~~~-------~l~-~lPvl~K~~~~~~fd~~~t~~l-~~-~~~~~~a~~~e 90 (430)
T TIGR02304 22 EALENWQAKQLEKFLQFVLSHSPWFQRY-HTI-------PFN-QWPMMDKALMMEHFDELNTAGL-KK-DEALDCAMRSE 90 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhc-cCC-------CHH-HCCCcCHHHHHHHHHHhhccCC-Ch-hhhhHHhhhhh
Confidence 46788999999999997 5999999997 222 466 7999999999999999884311 00 000 0
Q ss_pred -------cCCCeeEEEecccCCCCcceeeecchhHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCccccCC
Q 008073 88 -------AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKA 159 (578)
Q Consensus 88 -------~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~-gk~l~~~~~~~~~~t~~ 159 (578)
+-+.+. ...||||| |+|-.|.++++.... |....+ .++...++.. +|...|.++...
T Consensus 91 ~~r~f~~~~~~~~-v~~TSGSS-G~p~~f~~~~~~~~~-------~~a~~~-~~~~~~g~~~g~r~a~~~~~~~~----- 155 (430)
T TIGR02304 91 KTRDFKPCVGNIS-VGLSSGTS-GRRGLFVVSPEEQQM-------WAGGIL-AKVLPDGLFAKHRIAFFLRADNN----- 155 (430)
T ss_pred hhcccccccCcEE-EEECCCCC-CCceEEEECHHHHHH-------HHHHHH-hhhCccccccCCcEEEEEccChh-----
Confidence 113443 36899998 999999999886432 111111 1111123333 454443333220
Q ss_pred CcEEeecccccccCCCcccccccccccCCchhhcCCChhHHHHHHHHhccccCCccceeeccchhhHHHHHHHHHHHHHH
Q 008073 160 GFKVMAASAFPLQGSSNENLSQLIRHSSPREVIVGSNFQHQMYCHLLCGLRNYEFIDGIFSPYAIGLIGAFSFFESKWEQ 239 (578)
Q Consensus 160 Gip~G~~S~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~ 239 (578)
.+. ..+ +... . +..|++. +.+++
T Consensus 156 ----------ly~-~~~-~~~~----------------------------------~----------~~~~~l~-~~~~~ 178 (430)
T TIGR02304 156 ----------LYQ-SVN-NRWI----------------------------------S----------LDFFDLL-APFQA 178 (430)
T ss_pred ----------HHH-HHH-hccc----------------------------------e----------eeecCCC-cCHHH
Confidence 011 000 0000 0 1112223 44566
Q ss_pred HHHHHHhcCCCCCCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCceeEEEecCc---hHHHHHHHH
Q 008073 240 LCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGS---MSQYCSKIK 316 (578)
Q Consensus 240 l~~dI~~gti~~~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~~i~~~~~G~---~~~y~~~l~ 316 (578)
.++.|.+-...- +.|+| ..+.+|.+...+. |+ .+ .++ .+++++ ....++.|+
T Consensus 179 ~l~~L~~~~P~~-------------L~g~p--S~l~~LA~~~~~~---~l--~~--~~k---~ii~~~E~l~~~~r~~Ie 233 (430)
T TIGR02304 179 HIKRLNQRKPSI-------------IVAPP--SVLRALALEVMEG---EL--TI--KPK---KVISVAEVLEPQDRELIR 233 (430)
T ss_pred HHHHHHHhCCCE-------------EEEcH--HHHHHHHHHHHhc---CC--CC--Cce---EEEEccCCCCHHHHHHHH
Confidence 677776654111 33344 3355666655542 32 22 334 233333 366678899
Q ss_pred HHhCCCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEE--EeeCCCCCccccCCceeeccccCCCceEEEEEc
Q 008073 317 YYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFE--FLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVT 394 (578)
Q Consensus 317 ~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~E--Fip~~~~~~~~~~~~~l~~~ele~G~~YelVvT 394 (578)
+.|| ++++ +.||+|||+++. +|+. +.|++..+..|+| +++++. .++.|||
T Consensus 234 ~~fg-~~V~-~~YG~tEg~la~----eC~~--g~lHl~ed~~~vE~~ivD~~~--------------------~~~~ViT 285 (430)
T TIGR02304 234 NVFK-NTVH-QIYQATEGFLAS----TCRC--GTLHLNEDLVHIEKQYLDEHK--------------------RFVPIIT 285 (430)
T ss_pred HHhC-CCee-EccCCchhheEE----ecCC--CCEEEccccEEEEeeEECCCC--------------------ceEEEEe
Confidence 9996 9999 899999987774 4533 5688899999999 565331 1345999
Q ss_pred cCCc----eeccccCCEEEEeeeeCCC----CEE-EEEeeCCC-cc-----ccc--cCHHHHHHHHHHHHHHhccccCce
Q 008073 395 TYRG----FYRYRLGDIVKVVDFYNSS----PQV-EFVMRAPK-SS-----FEI--ISERDLMSAMESFQMMLRNVMAVE 457 (578)
Q Consensus 395 t~~G----LyRYr~GDvV~v~g~~~~~----P~i-~f~gR~~~-l~-----gEk--v~e~~v~~av~~~~~~l~~~~g~~ 457 (578)
++.. |+||+|||++++....|.| |+| ++.||.++ +. |.+ +++..+..++....+ .
T Consensus 286 ~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~--------~ 357 (430)
T TIGR02304 286 DFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLP--------L 357 (430)
T ss_pred cCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCC--------C
Confidence 9854 9999999999987776543 567 49999998 42 344 588888776554322 2
Q ss_pred eEEEEEeecCCCCCceEEEEEEe
Q 008073 458 IVEFAGYTNLESSPKKLMIFVEI 480 (578)
Q Consensus 458 l~~f~~~~~~~~~~~~y~l~vE~ 480 (578)
+.+|.++.. ...+..+.++.
T Consensus 358 i~~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 358 IVEYRVLQT---GSAQLELIADC 377 (430)
T ss_pred CceEEEEEc---cCCeEEEEEEe
Confidence 458887765 25677776654
No 9
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.19 E-value=1.7e-08 Score=115.31 Aligned_cols=228 Identities=14% Similarity=0.125 Sum_probs=123.5
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCC--CCccccccccCceeeeeec-CC---CCCCCCcceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGE--VPVLGGDYFASECYVGINL-DI---AQPPQTTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~--v~~~~~~y~asEg~~~i~~-~~---~~~~~~~~~~l~~~~~f~EFip 364 (578)
.++|++ +.+|+. ......+++.+|+ ++++ +.||+||+...+-. .+ .+.++..+. ..++ .-++.++
T Consensus 366 ~~~lr~---i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~-p~~g-~~~~i~d 439 (637)
T PRK00174 366 LSSLRL---LGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATR-PLPG-IQPAVVD 439 (637)
T ss_pred ccceeE---EEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccC-CCCC-ceEEEEC
Confidence 456663 344442 3334556666653 8999 99999997432110 01 111111111 2223 3456665
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC-----Ccee----------------ccccCCEEEEeeeeCCCCEEEEE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~-----~GLy----------------RYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
.+ + .++..|+.+||+|+.. .|.| .|+|||++++.. .-.+.|+
T Consensus 440 ~~--------g-----~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~ 502 (637)
T PRK00174 440 EE--------G-----NPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE----DGYYWIT 502 (637)
T ss_pred CC--------C-----CCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC----CCcEEEE
Confidence 33 2 2356899999999862 1111 299999999853 3479999
Q ss_pred eeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeec-CCCCCceEEEEEEeecCccccCCCHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFVEIREGCTKLRDSVAILRRCCS 499 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~ 499 (578)
||.++ +.|+++++.+|+++|.+. .+ +.+.+++.. .......-+.||++..+ ...+....+++.+
T Consensus 503 GR~dd~ik~~G~~v~p~eIE~~l~~~-------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~~---~~~~~~~~~~l~~ 570 (637)
T PRK00174 503 GRVDDVLNVSGHRLGTAEIESALVAH-------PK--VAEAAVVGRPDDIKGQGIYAFVTLKGG---EEPSDELRKELRN 570 (637)
T ss_pred EecccEEEeCCEEECHHHHHHHHHhC-------CC--cceEEEEeeEcCCCCeEEEEEEEECCC---CCCCHHHHHHHHH
Confidence 99998 789999999999998753 22 234444321 11111234567766543 1112222223333
Q ss_pred HHHHHhChhHHHhhhcCCCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhccc
Q 008073 500 SLEDAFGSIYKVQRDRGEISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGCS 567 (578)
Q Consensus 500 ~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~------~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~ 567 (578)
.+.+.|. ....|-.+.+|+ .|-..+-.=..+.++.. +.+.+.-+.|++.++.+.+..
T Consensus 571 ~l~~~l~---------~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 633 (637)
T PRK00174 571 WVRKEIG---------PIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEAR 633 (637)
T ss_pred HHHhhcC---------CccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHHH
Confidence 3333331 123566666652 33333321112223432 456677788999988887643
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.14 E-value=5.4e-08 Score=110.79 Aligned_cols=227 Identities=16% Similarity=0.143 Sum_probs=122.6
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhC--CCCccccccccCceeee-eecCCC---CCCCCcceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAG--EVPVLGGDYFASECYVG-INLDIA---QPPQTTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g--~v~~~~~~y~asEg~~~-i~~~~~---~~~~~~~~~l~~~~~f~EFip 364 (578)
.++|+ ++.+|+. ....+.+.+.+| +++++ +.||.||+... +...+. ..++..+. ..+ +.-++.++
T Consensus 357 l~~lr---~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~-p~~-g~~~~i~d 430 (625)
T TIGR02188 357 LSSLR---LLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATL-PFF-GIEPAVVD 430 (625)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccC-CcC-CceEEEEC
Confidence 35555 4455443 333455666665 38999 99999996432 211110 11111111 222 33455665
Q ss_pred CCCCCccccCCceeeccccC-CCceEEEEEccC-----Ccee----------------ccccCCEEEEeeeeCCCCEEEE
Q 008073 365 FDMEKNEAVGEETVDFSGVE-IGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEF 422 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele-~G~~YelVvTt~-----~GLy----------------RYr~GDvV~v~g~~~~~P~i~f 422 (578)
.+ + ..+. +|+.+||+|+.. .|+| -|+|||++++.. .-.+.|
T Consensus 431 ~~--------g-----~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i 493 (625)
T TIGR02188 431 EE--------G-----NPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DGYIWI 493 (625)
T ss_pred CC--------C-----CCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CCcEEE
Confidence 32 2 2355 799999999872 2222 199999999843 236889
Q ss_pred EeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHH
Q 008073 423 VMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCC 498 (578)
Q Consensus 423 ~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~ 498 (578)
+||.++ +.|+++.+.+|+++|.+. .+ +.+.+++. +.......-+.||.+..+ ...+....+++.
T Consensus 494 ~GR~dd~i~~~G~ri~p~eIE~~l~~~-------p~--V~e~~vvg~~~~~~g~~~~a~vv~~~~---~~~~~~~~~~l~ 561 (625)
T TIGR02188 494 TGRVDDVINVSGHRLGTAEIESALVSH-------PA--VAEAAVVGIPDDIKGQAIYAFVTLKDG---YEPDDELRKELR 561 (625)
T ss_pred EecccCEEEeCCEEECHHHHHHHHHhC-------CC--cceEEEEeeEcCCCCeEEEEEEEeCCC---CCCCHHHHHHHH
Confidence 999998 889999999999999863 22 33444432 111112234567776543 112222222333
Q ss_pred HHHHHHhChhHHHhhhcCCCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 008073 499 SSLEDAFGSIYKVQRDRGEISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 565 (578)
Q Consensus 499 ~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~------~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 565 (578)
+.+.+.|. ....|-.|.+|+ .|-..+-.=+.+..|.. .+++.+--+.|++.++.+++
T Consensus 562 ~~~~~~l~---------~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 562 KHVRKEIG---------PIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred HHHHhhcC---------CCccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCcccccCHHHHHHHHh
Confidence 33333331 123455566553 33332222122223431 23566777889999998865
No 11
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.09 E-value=3.9e-08 Score=113.69 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=84.4
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCC--CCCCCCcceeccCCceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDI--AQPPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~--~~~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
+++|+ ++++|+. ....+++.+.+++++++ +.||.||+...+.... ..... ......++ ..++.++.+.
T Consensus 259 ~~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~-~iG~p~~~-~~v~i~d~~g- 331 (705)
T PRK06060 259 FRSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLG-TLGRVLPP-YEIRVVAPDG- 331 (705)
T ss_pred cccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcC-cccccCCC-cEEEEECCCC-
Confidence 35665 4455542 44556777888889999 9999999743221111 00110 11222333 3456665432
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Ccee-----------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccc
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 431 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-----------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~g 431 (578)
..+.+|+.+||+|+.. .|+| -|+|||++++.. .-.+.|+||.++ ++|
T Consensus 332 ------------~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~ik~~G 395 (705)
T PRK06060 332 ------------TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTEVIGG 395 (705)
T ss_pred ------------CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceEEECC
Confidence 2356899999999763 3333 299999999843 236999999998 889
Q ss_pred cccCHHHHHHHHHHH
Q 008073 432 EIISERDLMSAMESF 446 (578)
Q Consensus 432 Ekv~e~~v~~av~~~ 446 (578)
+++...+|+.++.+.
T Consensus 396 ~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 396 VNVDPREVERLIIED 410 (705)
T ss_pred EEECHHHHHHHHHhC
Confidence 999999999888763
No 12
>PLN02654 acetate-CoA ligase
Probab=99.02 E-value=4e-07 Score=104.87 Aligned_cols=225 Identities=13% Similarity=0.084 Sum_probs=120.5
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCC--CCccccccccCceee-eeecCC----CCCCCCcceeccCCceEEEEee
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGE--VPVLGGDYFASECYV-GINLDI----AQPPQTTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~--v~~~~~~y~asEg~~-~i~~~~----~~~~~~~~~~l~~~~~f~EFip 364 (578)
+.|+ .+.+|+. ....+.+.+.+|+ +++. +.||.||+.. .+-..+ ..+.+ .+. ..++. =...++
T Consensus 397 ~~Lr---~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs-~G~-p~~g~-~v~i~d 469 (666)
T PLN02654 397 KSLR---VLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGS-ATF-PFFGV-QPVIVD 469 (666)
T ss_pred hhee---EEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCc-cCC-CCCCc-eEEEEC
Confidence 4555 3454443 3333455666664 7888 9999999632 111001 11111 111 22222 233444
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC-----Ccee----------------ccccCCEEEEeeeeCCCCEEEEE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~-----~GLy----------------RYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
.+ + .++..|+.+||+|... .|+| -|+|||++++.. .-.+.|+
T Consensus 470 ~~--------g-----~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l~i~ 532 (666)
T PLN02654 470 EK--------G-----KEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYYWLT 532 (666)
T ss_pred CC--------C-----CCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcEEEe
Confidence 32 2 2345677899999762 2333 189999998853 2368999
Q ss_pred eeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCS 499 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~ 499 (578)
||.++ +.|++++..+|+.+|.+. .+ +.+-+|+. +..........||.+..+ ...+.+..+++.+
T Consensus 533 GR~dd~I~~~G~ri~p~EIE~~l~~~-------p~--V~eaaVvg~~d~~~ge~~~a~Vvl~~~---~~~~~~l~~~l~~ 600 (666)
T PLN02654 533 GRVDDVINVSGHRIGTAEVESALVSH-------PQ--CAEAAVVGIEHEVKGQGIYAFVTLVEG---VPYSEELRKSLIL 600 (666)
T ss_pred eeccCeEEeCCEEECHHHHHHHHHhC-------CC--eeeEEEEeeEcCCCCeEEEEEEEECCC---CCCCHHHHHHHHH
Confidence 99998 889999999999998863 12 23444332 211111234567766543 1122222223333
Q ss_pred HHHHHhChhHHHhhhcCCCCCcEEEEeC---CCcHHHHHHHHHH---cCCCCCCCCCCcccCCHhHHHHHhc
Q 008073 500 SLEDAFGSIYKVQRDRGEISPLSVSIVK---PGTFDRLLQVAIE---KGAPASQYKPPKIVRNREIVEFMEG 565 (578)
Q Consensus 500 ~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~---~G~f~~~~~~~~~---~G~~~~Q~K~Pr~~~~~~~~~~l~~ 565 (578)
.+.+.| .....|-.|.+|+ ...=.+.++..+. .|. ..+.+.+..+.|++.++.+.+
T Consensus 601 ~~~~~L---------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 601 TVRNQI---------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred HHHHhC---------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCcccccCHHHHHHHHH
Confidence 333333 2233566777763 1111122232222 332 226777888999999888764
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.02 E-value=3e-08 Score=111.09 Aligned_cols=131 Identities=17% Similarity=0.138 Sum_probs=83.3
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee--eeecCCCC-CCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQ-PPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~--~i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
.|+|+ .+.+|+. ....+++++.+++++++ +.||+||+.. .++..... .....+. ..++. =+..++.++
T Consensus 298 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~g~-~v~i~d~~~ 371 (539)
T PRK06334 298 LPSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGM-PIRGM-DVLIVSEET 371 (539)
T ss_pred ccccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCce-ecCCC-EEEEEcCCC
Confidence 46676 3455543 44556777778779999 9999999743 32211100 0000112 22222 133344322
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee---------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy---------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
+ .++.+|+.+||+|... .|.| -|+|||++++.. .-.+.|+||.++
T Consensus 372 -------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~GR~~d~ 435 (539)
T PRK06334 372 -------K-----VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLKGRLSRF 435 (539)
T ss_pred -------C-----ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEEeccCCe
Confidence 1 2456899999999653 2322 399999999843 347889999998
Q ss_pred --ccccccCHHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++++.+|++++.+.
T Consensus 436 ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 436 VKIGAEMVSLEALESILMEG 455 (539)
T ss_pred EEECCEEECHHHHHHHHHHc
Confidence 889999999999999864
No 14
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.02 E-value=9.1e-08 Score=105.28 Aligned_cols=131 Identities=17% Similarity=0.187 Sum_probs=81.5
Q ss_pred cCCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCceeeeeecCCC-C------CCCCcceeccCCceEEEEe
Q 008073 293 LWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-Q------PPQTTRFVMLPTAAYFEFL 363 (578)
Q Consensus 293 lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~-~------~~~~~~~~l~~~~~f~EFi 363 (578)
-+|.++.+ +.+|. .....+.+.+.+++++++ ..||+||+...+..... + ......+ ..++ .-...+
T Consensus 256 ~~~~l~~~--~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~-~~~~-~~~~i~ 330 (502)
T TIGR01734 256 NYPHLTHF--LFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGF-AKPD-MNLFIM 330 (502)
T ss_pred cCCcccEE--EEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCcccccc-ccCC-CEEEEE
Confidence 45777633 33443 245556777778789999 99999996433221110 0 0000011 1111 122223
Q ss_pred eCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee-----------------ccccCCEEEEeeeeCCCCEEEEE
Q 008073 364 PFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 364 p~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
+.+ + ..+.+|+.+||++.+. .|.| -|+|||+.++.. . .+.|+
T Consensus 331 ~~~--------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~---~--~l~i~ 392 (502)
T TIGR01734 331 DEE--------G-----EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD---G--QLFYQ 392 (502)
T ss_pred CCC--------C-----CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC---C--EEEEe
Confidence 222 1 2355789999999763 2222 389999999853 3 99999
Q ss_pred eeCCC---ccccccCHHHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
||.++ +.|+|+++.+|++++.+.
T Consensus 393 GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 393 GRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred ccccCeEEECcEEeCHHHHHHHHHcC
Confidence 99998 889999999999988864
No 15
>PRK09274 peptide synthase; Provisional
Probab=99.00 E-value=1.7e-07 Score=104.82 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=85.2
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhC-CCCccccccccCceee-ee-ecCC------CC-CCC---CcceeccCCc
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAG-EVPVLGGDYFASECYV-GI-NLDI------AQ-PPQ---TTRFVMLPTA 357 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g-~v~~~~~~y~asEg~~-~i-~~~~------~~-~~~---~~~~~l~~~~ 357 (578)
.|+|+ .+.+|+. ...++++++.++ +++++ +.||+||+.. +. .... .. ... ..+. ..++
T Consensus 287 ~~~lr---~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~- 360 (552)
T PRK09274 287 LPSLR---RVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGR-PVDG- 360 (552)
T ss_pred Cchhh---EEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCc-cCCC-
Confidence 46776 3355443 556677788886 48999 9999999743 21 1110 00 000 0111 2233
Q ss_pred eEEEEeeCCCCCccccCCceeeccccCCCceEEEEEccC---------------------CceeccccCCEEEEeeeeCC
Q 008073 358 AYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---------------------RGFYRYRLGDIVKVVDFYNS 416 (578)
Q Consensus 358 ~f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---------------------~GLyRYr~GDvV~v~g~~~~ 416 (578)
.-+..+++.+. +.+..=.-.++..|+.+||+|... .|-.+|+|||++++..
T Consensus 361 ~~~~ivd~~~~----~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~---- 432 (552)
T PRK09274 361 VEVRIIAISDA----PIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA---- 432 (552)
T ss_pred ceEEEEecccc----ccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc----
Confidence 33556664321 000000113467899999999542 1224799999999843
Q ss_pred CCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 417 SPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 417 ~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.-.+.|+||.++ +.|++++..+|+.++.+.
T Consensus 433 dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 433 QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 347899999998 789999999999888864
No 16
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=98.97 E-value=2.4e-07 Score=104.24 Aligned_cols=129 Identities=16% Similarity=0.136 Sum_probs=81.9
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-ee-ecCC-CCCCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GI-NLDI-AQPPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i-~~~~-~~~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
+++|+ .+.+|+. ......+++.+| ++++ +.||+||... .+ +... ...++..+. ..| ...++.++.+.
T Consensus 322 ~~~lr---~~~~gG~~l~~~~~~~~~~~~g-~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~-g~~~~i~d~~~ 394 (570)
T PRK04319 322 LSSLR---HILSVGEPLNPEVVRWGMKVFG-LPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLP-GIEAAIVDDQG 394 (570)
T ss_pred cccce---EEEEcccCCCHHHHHHHHHHhC-CCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCC-CCEEEEECCCC
Confidence 56666 3444442 334455666665 8888 9999999732 22 1110 111111111 222 34566776442
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC-----Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~-----~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
.++.+|+.+||+|+.. .|+| -|+|||++++.. .-.+.|+||.++
T Consensus 395 -------------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~GR~~d~ 457 (570)
T PRK04319 395 -------------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQGRVDDV 457 (570)
T ss_pred -------------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEEecCCCE
Confidence 2357899999999752 2333 389999999843 337889999998
Q ss_pred --ccccccCHHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++++.+|+.++.+.
T Consensus 458 i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 458 IKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred EEECCEEECHHHHHHHHhhC
Confidence 779999999999888764
No 17
>PLN02574 4-coumarate--CoA ligase-like
Probab=98.97 E-value=7.4e-08 Score=108.21 Aligned_cols=131 Identities=15% Similarity=0.182 Sum_probs=84.7
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-eee-cCCCC-CCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GIN-LDIAQ-PPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~-~~~~~-~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
++.++ ++..|+. ...++++.+.+++++++ +.||+||+.. ... ..... ..........+ ..-.+.+++++
T Consensus 318 ~~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~-~~~v~i~d~~~ 392 (560)
T PLN02574 318 LKSLK---QVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAP-NMQAKVVDWST 392 (560)
T ss_pred cccce---EEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceeeeCC-CcEEEEEeCCC
Confidence 45665 3344432 44556667777779999 9999999743 211 11111 10001222233 34567777553
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
+ .++..|+.+||+|+.. .|.| -|+|||++++.. .-.+.|+||.++
T Consensus 393 -------g-----~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i 456 (560)
T PLN02574 393 -------G-----CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDRLKEII 456 (560)
T ss_pred -------C-----cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEecchhhe
Confidence 2 2456899999999863 2332 289999999853 347899999998
Q ss_pred -ccccccCHHHHHHHHHH
Q 008073 429 -SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 -l~gEkv~e~~v~~av~~ 445 (578)
+.|++++..+|+.++.+
T Consensus 457 ~~~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 457 KYKGFQIAPADLEAVLIS 474 (560)
T ss_pred EECCEEECHHHHHHHHHh
Confidence 88999999999988875
No 18
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=98.96 E-value=1.5e-07 Score=103.45 Aligned_cols=131 Identities=13% Similarity=0.109 Sum_probs=80.1
Q ss_pred cCCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCC-------CcceeccCCceEEEEe
Q 008073 293 LWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ-------TTRFVMLPTAAYFEFL 363 (578)
Q Consensus 293 lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~-------~~~~~l~~~~~f~EFi 363 (578)
-+|+++.+ +.+|. .....+.+++.+++++++ ..||+||....+.....++.. ...+ ..++.. ...+
T Consensus 258 ~~~~l~~i--~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~-~~i~ 332 (503)
T PRK04813 258 HLPNLTHF--LFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDSP-LLII 332 (503)
T ss_pred cCCCceEE--EEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCcccc-cCCCCE-EEEE
Confidence 45777744 23332 355567777888778898 999999963322111111100 0011 111211 1123
Q ss_pred eCCCCCccccCCceeeccccCCCceEEEEEccC--------------------CceeccccCCEEEEeeeeCCCCEEEEE
Q 008073 364 PFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY--------------------RGFYRYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 364 p~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~--------------------~GLyRYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
+.+ + ..+..|+.+||+|+.. .|.=-|+|||++++ . .-.+.|.
T Consensus 333 d~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~~~~~ 394 (503)
T PRK04813 333 DEE--------G-----TKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGLLFYQ 394 (503)
T ss_pred CCC--------C-----CCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCeEEEe
Confidence 321 2 2345788999999873 12113999999998 2 3479999
Q ss_pred eeCCC---ccccccCHHHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
||.++ +.|+|++..+|++++.+.
T Consensus 395 GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 395 GRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred ccccceEEECcEEeCHHHHHHHHHhC
Confidence 99998 889999999999888763
No 19
>PRK07514 malonyl-CoA synthase; Validated
Probab=98.96 E-value=9.6e-08 Score=105.15 Aligned_cols=132 Identities=16% Similarity=0.199 Sum_probs=85.1
Q ss_pred ccCCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecC--CCCCCCCcceeccCCceEEEEeeCC
Q 008073 292 KLWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLD--IAQPPQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 292 ~lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~--~~~~~~~~~~~l~~~~~f~EFip~~ 366 (578)
..+++++ .+.+|+. ....+.+++.++ .+++ +.||+||+.+..... ..+... ......++ .....++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~-~~G~~~~~-~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERTG-HAIL-ERYGMTETNMNTSNPYDGERRAG-TVGFPLPG-VSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHhC-Ccce-eecccccccccccCCccccccCc-ccccCCCC-cEEEEEECC
Confidence 3456666 4455543 334455666664 7888 899999974422111 111111 11122233 456677744
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Cceec--------------cccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
+ + ..+..|+.+||+|++. .|+|. |+|||+++... .-.+.|.||.++
T Consensus 339 ~-------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~~~ 402 (504)
T PRK07514 339 T-------G-----AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGRGKDL 402 (504)
T ss_pred C-------C-----CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEeccccce
Confidence 3 2 2356899999999874 45553 89999999854 236899999998
Q ss_pred --ccccccCHHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++++.+|++++.+.
T Consensus 403 i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 403 IISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred EEeCCeEECHHHHHHHHHhC
Confidence 889999999999988753
No 20
>PRK09088 acyl-CoA synthetase; Validated
Probab=98.96 E-value=1.3e-07 Score=103.84 Aligned_cols=129 Identities=15% Similarity=0.180 Sum_probs=81.2
Q ss_pred CCCCceeEEEecCchHHHHHHHHHHh-CCCCccccccccCceee--eeecCCC---CCCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSMSQYCSKIKYYA-GEVPVLGGDYFASECYV--GINLDIA---QPPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~~~y~~~l~~~~-g~v~~~~~~y~asEg~~--~i~~~~~---~~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
.++++ .+.+|+.....+.++++. .+++++ +.||+||+.. +++..+. ..+. ...... ....+++++.+
T Consensus 251 ~~~l~---~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~-~vG~~~-~~~~~~i~d~~- 323 (488)
T PRK09088 251 LRHLT---ALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAG-AAGIPT-PTVQTRVVDDQ- 323 (488)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCC-ccccCC-CCcEEEEECCC-
Confidence 35555 555666433333344433 258999 8999999743 3222211 0110 112222 33456666643
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
+ .++..|+.+||+|++. .|+| .|+|||++++.. ...+.|+||.++
T Consensus 324 -------~-----~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i 387 (488)
T PRK09088 324 -------G-----NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRKKDMF 387 (488)
T ss_pred -------C-----CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccccceE
Confidence 1 2356789999999874 3343 299999999953 346899999998
Q ss_pred -ccccccCHHHHHHHHHH
Q 008073 429 -SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 -l~gEkv~e~~v~~av~~ 445 (578)
+.|+|++..+|++++.+
T Consensus 388 ~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 388 ISGGENVYPAEIEAVLAD 405 (488)
T ss_pred EeCCEEECHHHHHHHHHh
Confidence 77999999999998865
No 21
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.96 E-value=7.5e-08 Score=105.95 Aligned_cols=132 Identities=18% Similarity=0.195 Sum_probs=83.8
Q ss_pred ccCCCCceeEEEecCc-h-HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCCC------CCCcceeccCCceEEEE
Q 008073 292 KLWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQP------PQTTRFVMLPTAAYFEF 362 (578)
Q Consensus 292 ~lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~~------~~~~~~~l~~~~~f~EF 362 (578)
..+++++. ++.+|. + ...++.+++.+ +++++ +.||+||.. ++........ .........+ ...++.
T Consensus 278 ~~~~~l~~--v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~i 352 (521)
T PRK06187 278 VDFSSLRL--VIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLP-GVEARI 352 (521)
T ss_pred cCcchhhE--EEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCCccccccC-CeEEEE
Confidence 34677774 333443 2 45556677777 58999 899999963 2221111000 0000111222 345667
Q ss_pred eeCCCCCccccCCceeeccccCC--CceEEEEEccC---Ccee-c------------cccCCEEEEeeeeCCCCEEEEEe
Q 008073 363 LPFDMEKNEAVGEETVDFSGVEI--GKMYEVVVTTY---RGFY-R------------YRLGDIVKVVDFYNSSPQVEFVM 424 (578)
Q Consensus 363 ip~~~~~~~~~~~~~l~~~ele~--G~~YelVvTt~---~GLy-R------------Yr~GDvV~v~g~~~~~P~i~f~g 424 (578)
++++. . ++.. |+.+||++++. .|.+ + |+|||+++... ...+.+.|
T Consensus 353 ~~~~~--------~-----~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~~~~~G 415 (521)
T PRK06187 353 VDDDG--------D-----ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGYLYITD 415 (521)
T ss_pred ECCCC--------C-----CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCCEEEee
Confidence 76542 1 2345 99999999885 3333 4 99999999854 34688999
Q ss_pred eCCC---ccccccCHHHHHHHHHH
Q 008073 425 RAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 425 R~~~---l~gEkv~e~~v~~av~~ 445 (578)
|.++ ++|++++..+|++++.+
T Consensus 416 R~~~~i~~~G~~v~~~~IE~~l~~ 439 (521)
T PRK06187 416 RIKDVIISGGENIYPRELEDALYG 439 (521)
T ss_pred cccceEEcCCeEECHHHHHHHHHh
Confidence 9998 88999999999887765
No 22
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.95 E-value=7.3e-08 Score=108.22 Aligned_cols=128 Identities=16% Similarity=0.231 Sum_probs=82.3
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCC--CCCCcceeccCCceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ--PPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~--~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
.+.++ +++.|+. ....+.+++.+ +++++ +.||+||+...+...+.. .+...+ ...+ ...++.++++.
T Consensus 325 ~~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG-~~~~-~~~v~i~d~~~- 396 (562)
T PRK05677 325 FSALK---LTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIG-IPVP-STLCKVIDDDG- 396 (562)
T ss_pred hhhce---EEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccC-ccCC-CCEEEEECCCC-
Confidence 35565 4455553 44445566666 48999 999999974322211111 111112 2223 34566776432
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
.++..|+.+||+|++. .|.| -|+|||++++.. .-.+.|.||.++
T Consensus 397 ------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~ 460 (562)
T PRK05677 397 ------------NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKKDMIL 460 (562)
T ss_pred ------------CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCcCeEE
Confidence 2356899999999763 2332 289999999864 236899999998
Q ss_pred ccccccCHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~ 445 (578)
+.|++++..+|++++.+
T Consensus 461 ~~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 461 VSGFNVYPNELEDVLAA 477 (562)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 78999999999988875
No 23
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=98.94 E-value=1.6e-07 Score=105.09 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=94.1
Q ss_pred cCCCCceeEEEecCc---hHHHHHHHHHHhCCCCccccccccCceee-eeecCCCC--CCCCcceeccCCceEEEEeeCC
Q 008073 293 LWPNVRYIKCVTTGS---MSQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQ--PPQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 293 lWP~L~~i~~~~~G~---~~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~~~~~--~~~~~~~~l~~~~~f~EFip~~ 366 (578)
-.|+|+ ++++|+ ......++++.+ +++++ +.||+||+.. +....... ..........++ .-++.++++
T Consensus 310 ~~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~-~~v~i~d~~ 383 (547)
T PRK13295 310 PVSSLR---TFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGCPLPG-VEVRVVDAD 383 (547)
T ss_pred Ccccce---EEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCccccccCC-cEEEEECCC
Confidence 356666 334443 255556677777 58999 9999999733 22111000 000000112222 235556533
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee-c-----------cccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-R-----------YRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-R-----------Yr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
+ .++..|+.+||+|+.. .|.| | |+|||++++.. ...+.|+||.++
T Consensus 384 --------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR~~~~i~ 446 (547)
T PRK13295 384 --------G-----APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGRSKDVII 446 (547)
T ss_pred --------C-----CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEeccCCeEE
Confidence 1 3456899999999874 4433 2 99999999843 457999999998
Q ss_pred ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecC-CCCCceEEEEEEee
Q 008073 429 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNL-ESSPKKLMIFVEIR 481 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~-~~~~~~y~l~vE~~ 481 (578)
+.|+|+++.+|+++|.+. .+ +.+.++.... .......+.+|+..
T Consensus 447 ~~G~~v~p~~IE~~l~~~-------~~--v~~~~v~~~~~~~~g~~~~~~v~~~ 491 (547)
T PRK13295 447 RGGENIPVVEIEALLYRH-------PA--IAQVAIVAYPDERLGERACAFVVPR 491 (547)
T ss_pred ECCEEECHHHHHHHHHhC-------CC--eeeEEEEeeecCCCCcEEEEEEEeC
Confidence 789999999999988753 22 3455554311 11113455677664
No 24
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=98.93 E-value=1.3e-06 Score=99.64 Aligned_cols=130 Identities=10% Similarity=0.010 Sum_probs=79.8
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeee-ecCCCC-----CCCCcceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQ-----PPQTTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i-~~~~~~-----~~~~~~~~l~~~~~f~EFip 364 (578)
.+.|+ .+.+|+. ......+++.+| .+++ +.||.||....+ ...+.. ..+..+. ..++ .-...++
T Consensus 353 l~~lr---~~~~gGe~l~~~~~~~~~~~~~-~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~-p~~g-~~v~i~d 425 (628)
T TIGR02316 353 LSSLH---WLFLAGEPLDEPTAHWITDGLG-KPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGL-PMYG-YHLRVLD 425 (628)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHhC-CCEE-ecccccccCceeecCCCCCCcCCCCCCCccc-CcCC-ceEEEEE
Confidence 45666 3444442 334455556665 7888 999999974322 111110 0010111 2222 2345555
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC------Ccee-----------------ccccCCEEEEeeeeCCCCEEE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY------RGFY-----------------RYRLGDIVKVVDFYNSSPQVE 421 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~------~GLy-----------------RYr~GDvV~v~g~~~~~P~i~ 421 (578)
.++ + .++..|+.+||+|+.. .|+| .|+|||++++.. .-.+.
T Consensus 426 ~~~-------g-----~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----dG~l~ 489 (628)
T TIGR02316 426 EAT-------G-----RPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----DGYTF 489 (628)
T ss_pred CCC-------C-----CCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----CCcEE
Confidence 432 2 2356899999999764 2222 389999998853 23689
Q ss_pred EEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 422 FVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 422 f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
|+||.++ +.|+++...+|+.+|.+.
T Consensus 490 i~GR~dd~ik~~G~rv~~~eIE~~l~~~ 517 (628)
T TIGR02316 490 ILGRTDDVINVAGHRLGTREIEESVSSH 517 (628)
T ss_pred EEEcCcceEEeCCEEeCHHHHHHHHHhC
Confidence 9999998 889999999999998753
No 25
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=98.93 E-value=1.4e-07 Score=105.66 Aligned_cols=122 Identities=17% Similarity=0.120 Sum_probs=80.1
Q ss_pred ecCch-HHHHHHHHHHhCCCCccccccccCceeeeeecC-CCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeecc
Q 008073 304 TTGSM-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLD-IAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFS 381 (578)
Q Consensus 304 ~~G~~-~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~-~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ 381 (578)
.+|+. ...++.+++.++ ++++ +.||+||+...+... +...+. ...... ...-+++++.+. .
T Consensus 300 ~~g~~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~~~~-~vG~~~-~~~~~~i~d~~~-------------~ 362 (542)
T PRK06155 300 LGPGVPAALHAAFRERFG-VDLL-DGYGSTETNFVIAVTHGSQRPG-SMGRLA-PGFEARVVDEHD-------------Q 362 (542)
T ss_pred EEcCCCHHHHHHHHHHcC-CCEE-eeecccccCccccCCCCCCCCC-CcCccC-CCceEEEECCCC-------------C
Confidence 34443 444566666674 8999 999999974322111 111111 111122 334566665432 3
Q ss_pred ccCCCceEEEEEccC------Cce-------------eccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHH
Q 008073 382 GVEIGKMYEVVVTTY------RGF-------------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDL 439 (578)
Q Consensus 382 ele~G~~YelVvTt~------~GL-------------yRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v 439 (578)
++..|+.+||+|+.. .|. -+|+|||++++.. .-.+.|+||.++ +.|+|+++.+|
T Consensus 363 ~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~~d~i~~~G~~v~p~eI 438 (542)
T PRK06155 363 ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRIKDAIRRRGENISSFEV 438 (542)
T ss_pred CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecCCCEEEeCCEEECHHHH
Confidence 456899999999875 232 2699999999843 347899999998 78999999999
Q ss_pred HHHHHHH
Q 008073 440 MSAMESF 446 (578)
Q Consensus 440 ~~av~~~ 446 (578)
+++|.+.
T Consensus 439 E~~l~~~ 445 (542)
T PRK06155 439 EQVLLSH 445 (542)
T ss_pred HHHHHhC
Confidence 9988763
No 26
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=98.93 E-value=6.3e-07 Score=102.17 Aligned_cols=228 Identities=14% Similarity=0.079 Sum_probs=120.9
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeee-ecCCCC---C--CCCcceeccCCceEEEEeeC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQ---P--PQTTRFVMLPTAAYFEFLPF 365 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i-~~~~~~---~--~~~~~~~l~~~~~f~EFip~ 365 (578)
+.|+ .+.+|+. ....+.+++.++ ++++ +.||.||....+ ...+.. + +...+. ..++ .-++.++.
T Consensus 355 ~~lr---~i~~~Ge~l~~~~~~~~~~~~~-~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~ 427 (629)
T PRK10524 355 SSLR---ALFLAGEPLDEPTASWISEALG-VPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYG-YNVKLLNE 427 (629)
T ss_pred hhee---EEEEeCCCCCHHHHHHHHHhcC-CCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCC-ceEEEEeC
Confidence 5555 4455553 333455666665 8898 999999974211 111100 0 000111 2222 23556664
Q ss_pred CCCCccccCCceeeccccCCCceEEEEEccC------Ccee-----------------ccccCCEEEEeeeeCCCCEEEE
Q 008073 366 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY------RGFY-----------------RYRLGDIVKVVDFYNSSPQVEF 422 (578)
Q Consensus 366 ~~~~~~~~~~~~l~~~ele~G~~YelVvTt~------~GLy-----------------RYr~GDvV~v~g~~~~~P~i~f 422 (578)
++ ++ ++.+|+.+||+|+.. .|+| -|+|||++++.. .-.+.|
T Consensus 428 ~~-------g~-----~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----dG~l~i 491 (629)
T PRK10524 428 VT-------GE-----PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA----DGYYFI 491 (629)
T ss_pred CC-------CC-----CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC----CCcEEE
Confidence 22 22 356899999999864 1222 389999998842 347899
Q ss_pred EeeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHH
Q 008073 423 VMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCC 498 (578)
Q Consensus 423 ~gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~ 498 (578)
+||.++ +.|+++...+|+++|.+. .+ +.+.+++. +........+.|+.+..+.. ..+....+.+.
T Consensus 492 ~GR~dd~i~~~G~ri~p~eIE~~l~~~-------p~--V~e~~vvg~~d~~~g~~~~~~vv~~~~~~--~~~~~~~~~~~ 560 (629)
T PRK10524 492 LGRTDDVINVAGHRLGTREIEESISSH-------PA--VAEVAVVGVKDALKGQVAVAFVVPKDSDS--LADREARLALE 560 (629)
T ss_pred EEEecCeEEeCCEEeCHHHHHHHHHhC-------CC--cceEEEEccccCCCCeEEEEEEEECCCCc--cccccchHHHH
Confidence 999998 889999999999999753 22 23444432 11111123345665543200 00001111223
Q ss_pred HHHHHHhChhHHHhhhcC-CCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 008073 499 SSLEDAFGSIYKVQRDRG-EISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 565 (578)
Q Consensus 499 ~~ld~~Ln~~Y~~~R~~g-~l~p~~v~~v~------~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 565 (578)
++|.+.+ ..+ .+ ...|-.|.+|. .|-..+-.=..+..|. ..+-+.-+.|++.++.+.+
T Consensus 561 ~~i~~~~-----~~~-l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~---~~~~~~~~~~~~~~~~~~~ 625 (629)
T PRK10524 561 KEIMALV-----DSQ-LGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR---DPGDLTTIEDPAALQQIRQ 625 (629)
T ss_pred HHHHHHH-----Hhh-cCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC---CCCCcccccCHHHHHHHHH
Confidence 3343433 111 23 34566777664 2322221111222343 3445677789999988865
No 27
>PRK07529 AMP-binding domain protein; Validated
Probab=98.93 E-value=1.5e-07 Score=107.59 Aligned_cols=133 Identities=11% Similarity=0.120 Sum_probs=83.6
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCC---CCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
+++|+ .+.+|+. ....+++++.+ +++++ ++||+||+.+.....+.. .....+. ..|. .-+.++..++
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~-~~p~-~~v~i~~~d~ 404 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGL-RLPY-QRVRVVILDD 404 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCccc-ccCC-ceEEEEEcCC
Confidence 45666 4455542 44456667767 48999 999999985433222111 0000111 2222 2355554442
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
. +. ...++.+|+.+||+|++. .|.+ -|+|||++++.. .-.+.|+||.++
T Consensus 405 ~------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~ 472 (632)
T PRK07529 405 A------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAKDLII 472 (632)
T ss_pred C------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEecccCEEE
Confidence 1 21 113467899999999763 3321 389999999853 347999999998
Q ss_pred ccccccCHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~ 445 (578)
+.|+++++.+|++++.+
T Consensus 473 ~~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 473 RGGHNIDPAAIEEALLR 489 (632)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 78999999999998875
No 28
>PRK07788 acyl-CoA synthetase; Validated
Probab=98.92 E-value=2.5e-07 Score=103.45 Aligned_cols=129 Identities=12% Similarity=0.001 Sum_probs=82.0
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC---CCCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA---QPPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~---~~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
.++|+ .++.|+. ....+++++.+| .+++ +.||+||+.+..-..+. ..+. ......++ .-++.++.+.
T Consensus 322 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~-~~l~-~~YG~TE~~~~~~~~~~~~~~~~~-~vG~~~~~-~~~~i~d~~~ 394 (549)
T PRK07788 322 TSSLK---IIFVSGSALSPELATRALEAFG-PVLY-NLYGSTEVAFATIATPEDLAEAPG-TVGRPPKG-VTVKILDENG 394 (549)
T ss_pred CCcee---EEEEeCCCCCHHHHHHHHHHhC-ccce-eccCcchhchhhccChhhhhhcCC-CcccCCCC-cEEEEECCCc
Confidence 45666 4454442 445566667675 7788 99999996432111110 0010 11112233 3456666442
Q ss_pred CCccccCCceeeccccCCCceEEEEEccCCceec-------------cccCCEEEEeeeeCCCCEEEEEeeCCC---ccc
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTYRGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 431 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l~g 431 (578)
.++..|+.+||+|++..-+-+ |+|||++++.. .-.+.|+||.++ +.|
T Consensus 395 -------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G 457 (549)
T PRK07788 395 -------------NEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMIVSGG 457 (549)
T ss_pred -------------CCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceEEECC
Confidence 235679999999988533322 68999988743 347899999998 889
Q ss_pred cccCHHHHHHHHHHH
Q 008073 432 EIISERDLMSAMESF 446 (578)
Q Consensus 432 Ekv~e~~v~~av~~~ 446 (578)
+|+++.+|++++.+.
T Consensus 458 ~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 458 ENVFPAEVEDLLAGH 472 (549)
T ss_pred EEECHHHHHHHHHhC
Confidence 999999999988753
No 29
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.89 E-value=2.4e-07 Score=104.21 Aligned_cols=159 Identities=14% Similarity=0.138 Sum_probs=95.0
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCCC--cceeccCCceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQT--TRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~~--~~~~l~~~~~f~EFip~~~~ 368 (578)
+++++ ++++|+. ......+++.++ ++++ +.||+||+...+-..+..+... ......++ ..++.+++++.
T Consensus 335 ~~~lr---~i~~gg~~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~i~d~~~~ 408 (573)
T PRK05605 335 LSGVR---NAFSGAMALPVSTVELWEKLTG-GLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGVPFPD-TEVRIVDPEDP 408 (573)
T ss_pred chhcc---EEEECCCcCCHHHHHHHHHHhC-CCee-cccccchhchhhhcCCcccCCcCCccccCCCC-CEEEEEcCCCC
Confidence 46666 3454543 444455555564 8888 8999999743221111111000 01122333 45777776531
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
+ ..+..|+.+||+|++. .|.| .|+|||+++... .-.+.|+||.++ +
T Consensus 409 ------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR~dd~i~~ 473 (573)
T PRK05605 409 ------D-----ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDRIKELIIT 473 (573)
T ss_pred ------C-----ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEeccccceee
Confidence 1 2356789999999864 4444 499999999843 247899999998 8
Q ss_pred cccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeec
Q 008073 430 SFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIRE 482 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~ 482 (578)
.|++++..+|++++... . + +.+.+++. +.........++|++..
T Consensus 474 ~G~~v~p~eIE~~l~~~-~------~--i~~~~v~~~~~~~~~~~~~~~vv~~~ 518 (573)
T PRK05605 474 GGFNVYPAEVEEVLREH-P------G--VEDAAVVGLPREDGSEEVVAAVVLEP 518 (573)
T ss_pred CCEEECHHHHHHHHHhC-c------c--cceEEEEeeecccCCeEEEEEEEECC
Confidence 89999999999988753 1 1 33444432 11111234557777654
No 30
>PRK06164 acyl-CoA synthetase; Validated
Probab=98.88 E-value=3.4e-07 Score=102.04 Aligned_cols=108 Identities=19% Similarity=0.152 Sum_probs=72.3
Q ss_pred CCCccccccccCceeeeeecCCCCC-----CCCcceeccCCceEEEEeeCCCCCccccCCceeeccccCCCceEEEEEcc
Q 008073 321 EVPVLGGDYFASECYVGINLDIAQP-----PQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTT 395 (578)
Q Consensus 321 ~v~~~~~~y~asEg~~~i~~~~~~~-----~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt 395 (578)
+++++ +.||+||+...+....... ...+.+.+. .....+++++++ + ..+..|+.+||+|++
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~~-------~-----~~~~~g~~Gel~v~g 384 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQD-------G-----ALLPDGESGEIEIRA 384 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCCC-------C-----cCCCCCCeeEEEEec
Confidence 58899 9999999743322111100 001123222 334577777554 2 235689999999988
Q ss_pred C---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 396 Y---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 396 ~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
. .|.| -|+|||++++.. .-.+.|+||.++ +.|++++..+|++++.+.
T Consensus 385 ~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~ 451 (540)
T PRK06164 385 PSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEAL 451 (540)
T ss_pred ccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHhC
Confidence 3 2321 389999998854 347889999998 789999999999988753
No 31
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=98.88 E-value=4.7e-07 Score=101.08 Aligned_cols=131 Identities=15% Similarity=0.194 Sum_probs=81.1
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-eeecCCCC--CCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQ--PPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~~~~~--~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
+++++ +++.|+. ....+.+++.++ ++++ +.||.||+.. +....... .+...++. .+. ..++.+..++
T Consensus 311 ~~~l~---~i~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~v~~~d~ 383 (541)
T TIGR03205 311 LSSLA---TIGSGGAPLPVEVANFFERKTG-LKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLM-LPG-IELDVVSLDD 383 (541)
T ss_pred ccccc---eEEEccccCCHHHHHHHHHHhC-CCee-cccccccCCcccccCCCCCCCCCCCccee-ccC-ceeEEEecCC
Confidence 34555 4455543 334455666665 8998 9999999743 21111110 01111222 222 2344443332
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
. + .++..|+.+||+|++. .|+| +|+|||++++.. .-.+.|+||.++
T Consensus 384 ~------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~~~i~ 448 (541)
T TIGR03205 384 P------T-----KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKKDMII 448 (541)
T ss_pred C------C-----ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEccccCeEE
Confidence 1 2 2456799999999873 3333 699999999843 237889999998
Q ss_pred ccccccCHHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++++.+|+.++.+.
T Consensus 449 ~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 449 SGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred ECCEEECHHHHHHHHHhC
Confidence 889999999999988763
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.88 E-value=3e-07 Score=101.28 Aligned_cols=129 Identities=18% Similarity=0.132 Sum_probs=80.7
Q ss_pred CCCCceeEEEecCc--h-HHHHHHHHHHhCCCCccccccccCce-eee-eecCCCCC---CCCcceeccCCceEEEEeeC
Q 008073 294 WPNVRYIKCVTTGS--M-SQYCSKIKYYAGEVPVLGGDYFASEC-YVG-INLDIAQP---PQTTRFVMLPTAAYFEFLPF 365 (578)
Q Consensus 294 WP~L~~i~~~~~G~--~-~~y~~~l~~~~g~v~~~~~~y~asEg-~~~-i~~~~~~~---~~~~~~~l~~~~~f~EFip~ 365 (578)
.++++ .+.+|+ + ...+..+++.+|..+++ +.||+||+ .++ .+...... +. ......++ .-++.+++
T Consensus 280 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~-~vG~~~~~-~~~~i~d~ 353 (513)
T PRK07656 280 LSSLR---LAVTGAASMPVALLERFESELGVDIVL-TGYGLSEASGVTTFNRLDDDRKTVAG-TIGTAIAG-VENKIVNE 353 (513)
T ss_pred cccee---eEEecCCCCCHHHHHHHHHHcCCCceE-eEEccccCCCceeecCccccccccCC-CccccCCC-cEEEEECC
Confidence 35555 334444 2 44456666767633788 99999998 332 21110000 00 11122233 34566653
Q ss_pred CCCCccccCCceeeccccCCCceEEEEEccCC---cee----------c----cccCCEEEEeeeeCCCCEEEEEeeCCC
Q 008073 366 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY----------R----YRLGDIVKVVDFYNSSPQVEFVMRAPK 428 (578)
Q Consensus 366 ~~~~~~~~~~~~l~~~ele~G~~YelVvTt~~---GLy----------R----Yr~GDvV~v~g~~~~~P~i~f~gR~~~ 428 (578)
+ + ..+..|+.+||+|++.. |.| + |+|||+++... .-.+.++||.++
T Consensus 354 ~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~~~GR~~d 416 (513)
T PRK07656 354 L--------G-----EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLYIVDRKKD 416 (513)
T ss_pred C--------C-----CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEEEEecccc
Confidence 3 1 34578999999998753 222 3 89999998843 347899999998
Q ss_pred ---ccccccCHHHHHHHHHH
Q 008073 429 ---SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 ---l~gEkv~e~~v~~av~~ 445 (578)
+.|++++..+|+++|.+
T Consensus 417 ~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 417 MFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred eEEeCCEEeCHHHHHHHHHh
Confidence 88999999999998875
No 33
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=98.88 E-value=9.8e-07 Score=101.20 Aligned_cols=224 Identities=15% Similarity=0.138 Sum_probs=120.7
Q ss_pred EEEecCch---HHHHHHHHHHhC-CCCccccccccCceeeeeecC-CCCCCCCcc-eeccCCceEEEEeeCCCCCccccC
Q 008073 301 KCVTTGSM---SQYCSKIKYYAG-EVPVLGGDYFASECYVGINLD-IAQPPQTTR-FVMLPTAAYFEFLPFDMEKNEAVG 374 (578)
Q Consensus 301 ~~~~~G~~---~~y~~~l~~~~g-~v~~~~~~y~asEg~~~i~~~-~~~~~~~~~-~~l~~~~~f~EFip~~~~~~~~~~ 374 (578)
.++.+|+. ....+.+.+.++ +++++ ..||.||....+... +..+...+. ....++ .-+..++.+
T Consensus 386 r~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g-~~~~ivd~~-------- 455 (655)
T PRK03584 386 RTIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQCRGLG-MAVEAWDED-------- 455 (655)
T ss_pred EEEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCCCcCC-ceeEEECCC--------
Confidence 35555553 334455666664 58888 999999963222111 000000011 111222 223444433
Q ss_pred CceeeccccCCCceEEEEEccC-----Ccee------c------------cccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 375 EETVDFSGVEIGKMYEVVVTTY-----RGFY------R------------YRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 375 ~~~l~~~ele~G~~YelVvTt~-----~GLy------R------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
+. ++ .|+.+||+|... .|+| | |+|||++++.. .-.+.|+||.++
T Consensus 456 g~-----~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i~GR~dd~Ik 525 (655)
T PRK03584 456 GR-----PV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGVVIYGRSDATLN 525 (655)
T ss_pred CC-----CC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeEEEEeeccCeee
Confidence 22 24 688999999863 2333 1 78999999843 347999999998
Q ss_pred ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhCh
Q 008073 429 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGS 507 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~ 507 (578)
+.|+++...+|+.+|.+. .+ +.+.+++. +........++||++..+ ...+....+++.+.+.+.|
T Consensus 526 ~~G~rI~p~EIE~~l~~~-------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~~---~~~~~~~~~~l~~~~~~~L-- 591 (655)
T PRK03584 526 RGGVRIGTAEIYRQVEAL-------PE--VLDSLVIGQEWPDGDVRMPLFVVLAEG---VTLDDALRARIRTTIRTNL-- 591 (655)
T ss_pred cCcEEECHHHHHHHHHhC-------CC--cceEEEEeeEcCCCCEEEEEEEEECCC---CCCcHHHHHHHHHHHHhhC--
Confidence 789999999999988753 22 22433332 211122345678887643 1122222223333333333
Q ss_pred hHHHhhhcCCCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 008073 508 IYKVQRDRGEISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 565 (578)
Q Consensus 508 ~Y~~~R~~g~l~p~~v~~v~------~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 565 (578)
.....|-.|.+|+ .|-..+..=+.+..|...+|...+.-+.|++.++.+.+
T Consensus 592 -------~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 592 -------SPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred -------CCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 1123566777764 22222111112234665665556777889998887744
No 34
>PRK06145 acyl-CoA synthetase; Validated
Probab=98.87 E-value=2.3e-07 Score=102.08 Aligned_cols=131 Identities=11% Similarity=0.051 Sum_probs=84.5
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCC---CCCCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDI---AQPPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~---~~~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
.++++ ++.+|+. ...++.+++.+++++++ +.||+||+........ ............++ .-.+.++++
T Consensus 263 ~~~l~---~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~i~~~~- 336 (497)
T PRK06145 263 LDSLA---WCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRALAH-VEIRIADGA- 336 (497)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccCCCC-ceEEEECCC-
Confidence 36666 3444442 44567777788889999 9999999854221110 11000011122233 335555532
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
+ ..+.+|+.+||++++. .|.| .|+|||+++... .-.+.|+||.++
T Consensus 337 -------~-----~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~ 400 (497)
T PRK06145 337 -------G-----RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRKKDMII 400 (497)
T ss_pred -------C-----CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccccceEE
Confidence 1 2345789999999874 4454 399999999853 337899999998
Q ss_pred ccccccCHHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++.+.+|+.++.+.
T Consensus 401 ~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 401 SGGENIASSEVERVIYEL 418 (497)
T ss_pred eCCeEECHHHHHHHHHhC
Confidence 789999999999888764
No 35
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.86 E-value=5.4e-07 Score=100.44 Aligned_cols=131 Identities=13% Similarity=0.151 Sum_probs=81.9
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC-CCCCCcceeccCCceEEEEeeCCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-QPPQTTRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~-~~~~~~~~~l~~~~~f~EFip~~~~~ 369 (578)
+++++ ++.+|+. ....+++.+.++ ++++ +.||.||+.......+. ...........++ .-...+++++
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g-~~~~i~d~~~-- 375 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELTG-LDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIPTFG-VDARVIDPET-- 375 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHcC-CcEE-ecccccccccceecCCCcCCCCCccCcccCC-eEEEEEeCCC--
Confidence 46666 3454542 334456666675 8888 99999997443211111 0000011112223 2344455432
Q ss_pred ccccCCceeeccccCCCceEEEEEccC---Ccee-----------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 370 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
+ ..++.|+.+||+|... .|.| -|+|||++++.. .-.+.++||.++
T Consensus 376 -----~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~d~ 441 (546)
T PRK08314 376 -----L-----EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITDRLKRM 441 (546)
T ss_pred -----C-----cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEecchhh
Confidence 2 3456899999999753 2322 489999998843 347899999998
Q ss_pred --ccccccCHHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~~ 446 (578)
+.|++++..+|+++|.+.
T Consensus 442 i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 442 INASGFKVWPAEVENLLYKH 461 (546)
T ss_pred EEeCCEEECHHHHHHHHHhC
Confidence 889999999999998864
No 36
>PRK08316 acyl-CoA synthetase; Validated
Probab=98.85 E-value=6e-07 Score=99.08 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=76.0
Q ss_pred HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCCC---CCCcceeccCCceEEEEeeCCCCCccccCCceeeccccC
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVE 384 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele 384 (578)
....+.+++.+++++++ +.||+||+. ++....+... ....+. ..++ .-+..++.+ + .++.
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~--------~-----~~~~ 363 (523)
T PRK08316 300 VEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGR-PVLN-VETRVVDDD--------G-----NDVA 363 (523)
T ss_pred HHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCccc-CCCC-cEEEEEcCC--------C-----CCCC
Confidence 45557778878789999 999999963 3321111000 000111 1122 223344422 2 2345
Q ss_pred CCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 385 IGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 385 ~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
.|+.+||++++. .|.| .|+|||++++.. ...+.|+||.++ +.|+|++..+|++++.+
T Consensus 364 ~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~ 439 (523)
T PRK08316 364 PGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKKDMIKTGGENVASREVEEALYT 439 (523)
T ss_pred CCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccccEEEeCCeEECHHHHHHHHHh
Confidence 789999999874 3333 399999999854 347899999998 78999999999988865
Q ss_pred H
Q 008073 446 F 446 (578)
Q Consensus 446 ~ 446 (578)
.
T Consensus 440 ~ 440 (523)
T PRK08316 440 H 440 (523)
T ss_pred C
Confidence 3
No 37
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.83 E-value=7.1e-07 Score=100.09 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=81.4
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC-C--CCCCcceeccCCceEEEEeeCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-Q--PPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~-~--~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
|+++ ++.+|+. .....++++.+ +++++ +.||+||+...+..... . .+...++ ..+ ..-++.++.+
T Consensus 325 ~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~~~~-- 395 (560)
T PRK08974 325 SSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGL-PVP-STEIKLVDDD-- 395 (560)
T ss_pred ccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCcccc-CcC-CCEEEEECCC--
Confidence 5555 4455553 33344555655 48999 89999997433211111 0 0111122 222 2346666643
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Cceec-------------cccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
+ .++..|+.+||+|++. .|.|. |+|||+++... .-.+.|+||.++ +
T Consensus 396 ------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~ 460 (560)
T PRK08974 396 ------G-----NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKDMILV 460 (560)
T ss_pred ------C-----CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccceEEe
Confidence 1 2456899999999774 34332 99999999843 346899999998 7
Q ss_pred cccccCHHHHHHHHHHH
Q 008073 430 SFEIISERDLMSAMESF 446 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~~ 446 (578)
.|+|++..+|+++|.+.
T Consensus 461 ~G~~i~~~~IE~~l~~~ 477 (560)
T PRK08974 461 SGFNVYPNEIEDVVMLH 477 (560)
T ss_pred CCEEECHHHHHHHHHhC
Confidence 89999999999998753
No 38
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.83 E-value=1e-06 Score=98.45 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=82.9
Q ss_pred EEEecCc--h-HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCCC---CCCcceeccCCceEEEEeeCCCCCcccc
Q 008073 301 KCVTTGS--M-SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAV 373 (578)
Q Consensus 301 ~~~~~G~--~-~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~ 373 (578)
.++.+|+ + ...++.+++.+++++++ +.||+||+. ++........ ....+. ..+ ....++++.+.
T Consensus 293 r~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~~------ 363 (542)
T PRK07786 293 RVLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGK-VIP-TVAARVVDENM------ 363 (542)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccc-cCC-CceEEEECCCC------
Confidence 3445554 2 45667788888889999 999999973 2221111100 000111 222 34567776432
Q ss_pred CCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---cccccc
Q 008073 374 GEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEII 434 (578)
Q Consensus 374 ~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv 434 (578)
.++..|+.+||++... .|+| .|+|||+++... .-.+.|+||.++ +.|+++
T Consensus 364 -------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d~i~~~G~~v 432 (542)
T PRK07786 364 -------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKDMIISGGENI 432 (542)
T ss_pred -------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccceEEeCCEEE
Confidence 2356799999999663 4444 399999999843 246899999998 889999
Q ss_pred CHHHHHHHHHH
Q 008073 435 SERDLMSAMES 445 (578)
Q Consensus 435 ~e~~v~~av~~ 445 (578)
+..+|+.+|.+
T Consensus 433 ~~~eiE~~l~~ 443 (542)
T PRK07786 433 YCAEVENVLAS 443 (542)
T ss_pred CHHHHHHHHHh
Confidence 99999998875
No 39
>PRK05852 acyl-CoA synthetase; Validated
Probab=98.80 E-value=6.8e-07 Score=99.65 Aligned_cols=131 Identities=20% Similarity=0.197 Sum_probs=83.3
Q ss_pred cCCCCceeEEEecCc---hHHHHHHHHHHhCCCCccccccccCceeeeeecCCC----C---CCCCcceeccCCceEEEE
Q 008073 293 LWPNVRYIKCVTTGS---MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA----Q---PPQTTRFVMLPTAAYFEF 362 (578)
Q Consensus 293 lWP~L~~i~~~~~G~---~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~----~---~~~~~~~~l~~~~~f~EF 362 (578)
-+|.++++ .+|+ ....++.+++.++ ++++ +.||.||+...+..... + +......+-.......+.
T Consensus 293 ~~~~lr~i---~~~G~~~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i 367 (534)
T PRK05852 293 KPAALRFI---RSCSAPLTAETAQALQTEFA-APVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRI 367 (534)
T ss_pred cCCCeeEE---EECCCCCCHHHHHHHHHHhC-CChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEE
Confidence 45677633 4443 2455566777775 8898 89999997422111000 0 000011211123445667
Q ss_pred eeCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeC
Q 008073 363 LPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRA 426 (578)
Q Consensus 363 ip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~ 426 (578)
++.+. .++.+|+.+||+|++. .|.| .|+|||+++... .-.+.|+||.
T Consensus 368 ~d~~g-------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~l~~~gR~ 430 (534)
T PRK05852 368 VGSDG-------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGDLSIRGRI 430 (534)
T ss_pred ECCCC-------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCcEEEEecc
Confidence 76442 2456899999999775 3333 389999999853 2368999999
Q ss_pred CC---ccccccCHHHHHHHHHH
Q 008073 427 PK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 427 ~~---l~gEkv~e~~v~~av~~ 445 (578)
++ +.|++++..+|++++.+
T Consensus 431 ~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 431 KELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred hhhEEECCEEECHHHHHHHHHh
Confidence 98 77999999999998875
No 40
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=98.80 E-value=3.7e-07 Score=102.24 Aligned_cols=124 Identities=16% Similarity=0.184 Sum_probs=78.8
Q ss_pred EEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC---CCCcceeccCCceEEEEeeCCCCCccccCC
Q 008073 302 CVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAVGE 375 (578)
Q Consensus 302 ~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~~~ 375 (578)
.+..|+. ....+++++.+| ++++ +.||+||+...+....... +...+. .. .+.-.+.++.+ +
T Consensus 331 ~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-p~-~g~~v~i~d~~--------~ 398 (557)
T PRK07059 331 VANGGGMAVQRPVAERWLEMTG-CPIT-EGYGLSETSPVATCNPVDATEFSGTIGL-PL-PSTEVSIRDDD--------G 398 (557)
T ss_pred EEEeccccCCHHHHHHHHHHhC-CCee-eccccccccchhhcCCCCCCCcCCcccC-cc-CCcEEEEECCC--------C
Confidence 4455553 444456666664 8999 9999999744321111100 111111 22 23346666533 2
Q ss_pred ceeeccccCCCceEEEEEccCC---cee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccC
Q 008073 376 ETVDFSGVEIGKMYEVVVTTYR---GFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIIS 435 (578)
Q Consensus 376 ~~l~~~ele~G~~YelVvTt~~---GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~ 435 (578)
+ .+..|+.+||++++.. |.| -|+|||+++... .-.+.|+||.++ +.|++++
T Consensus 399 ~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~G~~i~ 469 (557)
T PRK07059 399 N-----DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKKDMILVSGFNVY 469 (557)
T ss_pred C-----CCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccccceEECCEEEc
Confidence 2 3568999999998732 222 289999988743 346899999998 8899999
Q ss_pred HHHHHHHHHHH
Q 008073 436 ERDLMSAMESF 446 (578)
Q Consensus 436 e~~v~~av~~~ 446 (578)
+.+|++++.+.
T Consensus 470 p~~iE~~l~~~ 480 (557)
T PRK07059 470 PNEIEEVVASH 480 (557)
T ss_pred HHHHHHHHHhC
Confidence 99999988753
No 41
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=98.79 E-value=5.3e-07 Score=100.87 Aligned_cols=119 Identities=17% Similarity=0.181 Sum_probs=77.4
Q ss_pred HHHHHHHHHHhCCCCccccccccCcee-eeeecC-CCC-----CCCCcceeccCCceEEEEeeCCCCCccccCCceeecc
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLD-IAQ-----PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFS 381 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~-~~~-----~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ 381 (578)
...++++++.+++++++ +.||+||+. +++... +.. .....+. ..++. =.+++++++ + .
T Consensus 317 ~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~~-~v~i~d~~~-------~-----~ 381 (546)
T PLN02330 317 PELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGF-ILPNL-EVKFIDPDT-------G-----R 381 (546)
T ss_pred HHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccc-ccCCc-EEEEEeCCC-------C-----c
Confidence 55567777778789999 999999963 333211 000 0000111 12222 256666443 1 2
Q ss_pred ccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHH
Q 008073 382 GVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMS 441 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~ 441 (578)
.+.+|+.+||+|+.. .|+| -|+|||++++..- -.+.|.||.++ +.|++++..+|+.
T Consensus 382 ~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~d----G~l~~~GR~~d~i~~~G~~v~~~~iE~ 457 (546)
T PLN02330 382 SLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDD----GDIFIVDRIKELIKYKGFQVAPAELEA 457 (546)
T ss_pred cCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCC----CcEEEEechHHhhhcCCEEECHHHHHH
Confidence 356899999999753 3332 2899999998541 26889999998 8899999999999
Q ss_pred HHHHH
Q 008073 442 AMESF 446 (578)
Q Consensus 442 av~~~ 446 (578)
++.+.
T Consensus 458 ~l~~~ 462 (546)
T PLN02330 458 ILLTH 462 (546)
T ss_pred HHHhC
Confidence 88753
No 42
>PRK13382 acyl-CoA synthetase; Provisional
Probab=98.79 E-value=3.8e-07 Score=101.98 Aligned_cols=129 Identities=16% Similarity=0.125 Sum_probs=82.6
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCC---CCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
+++++ .+++|+. ...+.++++.+| .+++ +.||+||+....-..+.. .+...+. ..+ ..-+++++.+.
T Consensus 311 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~-~~~~~i~d~~~ 383 (537)
T PRK13382 311 GRSLR---FAAASGSRMRPDVVIAFMDQFG-DVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PAE-GTEIRILDQDF 383 (537)
T ss_pred cccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-ecccccccCcceecChhHhccCCCCccc-cCc-CcEEEEECCCC
Confidence 45666 4455542 455667777776 6788 999999974322111100 0000111 222 34566776442
Q ss_pred CCccccCCceeeccccCCCceEEEEEccCC---ce----------eccccCCEEEEeeeeCCCCEEEEEeeCCC---ccc
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GF----------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 431 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~~---GL----------yRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~g 431 (578)
.++..|+.+||+|++.+ |. -.|+|||+++... .-.+.|+||.++ +.|
T Consensus 384 -------------~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~ik~~G 446 (537)
T PRK13382 384 -------------REVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMIVSGG 446 (537)
T ss_pred -------------CCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEeccccceeEECC
Confidence 24568999999998742 21 2589999999854 236889999998 889
Q ss_pred cccCHHHHHHHHHHH
Q 008073 432 EIISERDLMSAMESF 446 (578)
Q Consensus 432 Ekv~e~~v~~av~~~ 446 (578)
++++..+|+.++.+.
T Consensus 447 ~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 447 ENVYPIEVEKTLATH 461 (537)
T ss_pred EEECHHHHHHHHHhC
Confidence 999999999988753
No 43
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=98.79 E-value=4.4e-07 Score=96.78 Aligned_cols=130 Identities=19% Similarity=0.239 Sum_probs=82.7
Q ss_pred CCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCceeeee---ecCCCCCCC----CcceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGI---NLDIAQPPQ----TTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i---~~~~~~~~~----~~~~~l~~~~~f~EFip 364 (578)
.++++.+ +.+|. ....++.+++.+++++++ ..||+||+...+ +........ ..+ ...++ .....++
T Consensus 233 ~~~l~~v--~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G-~~~~~-~~~~i~~ 307 (408)
T TIGR01733 233 LASLRLV--ILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIG-RPLAN-TRLYVLD 307 (408)
T ss_pred ccCceEE--EEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccC-cccCC-ceEEEEC
Confidence 4667643 22333 255667778888779999 999999974322 111111100 000 11222 2334444
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC---Ccee----------------------ccccCCEEEEeeeeCCCCE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY----------------------RYRLGDIVKVVDFYNSSPQ 419 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy----------------------RYr~GDvV~v~g~~~~~P~ 419 (578)
++ . ..+..|+.+||+|+.. .|.| .|+|||++.+.. .-+
T Consensus 308 ~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----~g~ 370 (408)
T TIGR01733 308 DD--------L-----RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP----DGN 370 (408)
T ss_pred CC--------C-----CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC----CCC
Confidence 33 1 2356899999999873 2232 599999999954 236
Q ss_pred EEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 420 VEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 420 i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
+.|+||.++ +.|+|+++.+|++++.+
T Consensus 371 ~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 371 LEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred EEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 999999998 78999999999998874
No 44
>PRK06839 acyl-CoA synthetase; Validated
Probab=98.78 E-value=8.6e-07 Score=97.31 Aligned_cols=128 Identities=15% Similarity=0.128 Sum_probs=80.0
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-eeecCCCCC---CCCcceeccCCceEEEEeeCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQP---PQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~ 366 (578)
++.++ .+..|+. ....+.+++. ++++. +.||+||+.. ......... ....+. ..++ .-++.++++
T Consensus 263 ~~~lr---~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~d~~ 334 (496)
T PRK06839 263 LQSVR---WFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGK-PVLF-CDYELIDEN 334 (496)
T ss_pred Ccccc---eEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCcc-cCCC-ceEEEECCC
Confidence 45555 3444443 4444555554 58888 9999999743 221111100 000111 1222 345666654
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccCC---cee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~~---GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
. .++..|+.+||+|++.. |.| .|+|||+++... .-.+.|+||.++
T Consensus 335 ~-------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i 397 (496)
T PRK06839 335 K-------------NKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRKKEMI 397 (496)
T ss_pred c-------------CCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccccceE
Confidence 3 23678999999998753 332 289999999853 346889999998
Q ss_pred -ccccccCHHHHHHHHHHH
Q 008073 429 -SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 -l~gEkv~e~~v~~av~~~ 446 (578)
+.|+|+.+.+|++++.+.
T Consensus 398 ~~~G~~v~p~~iE~~l~~~ 416 (496)
T PRK06839 398 ISGGENIYPLEVEQVINKL 416 (496)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 679999999999988753
No 45
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.78 E-value=1.4e-06 Score=105.90 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=85.3
Q ss_pred cCCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCcee--eeeecCCC----------CCCCCcceeccCCc
Q 008073 293 LWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY--VGINLDIA----------QPPQTTRFVMLPTA 357 (578)
Q Consensus 293 lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~--~~i~~~~~----------~~~~~~~~~l~~~~ 357 (578)
-.|+++ .+.+|+. ...++.+++.+| ++++ +.||+||+. +..+.... +.+...+. ..|+
T Consensus 896 ~~~~lr---~~~~gg~~~~~~~~~~~~~~~g-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~~- 968 (1146)
T PRK08633 896 MFASLR---LVVAGAEKLKPEVADAFEEKFG-IRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLPG- 968 (1146)
T ss_pred cCCCee---eEEEcCCcCCHHHHHHHHHHhC-CCee-cccccccCcceEEEecCcccccccccccCCCCCCccc-cCCC-
Confidence 356666 4455553 445566677675 8998 999999963 22221110 00111111 2233
Q ss_pred eEEEEeeCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee-----------------ccccCCEEEEeeeeCCC
Q 008073 358 AYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSS 417 (578)
Q Consensus 358 ~f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~g~~~~~ 417 (578)
.-.+.+++++ + .++.+|+.+||+|+.. .|.| .|+|||++++.. .
T Consensus 969 ~~v~i~d~~~-------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~----~ 1032 (1146)
T PRK08633 969 VAVRIVDPET-------F-----EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE----D 1032 (1146)
T ss_pred CEEEEEcCCC-------C-----ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC----C
Confidence 3466666543 2 3466899999999764 2332 389999999854 3
Q ss_pred CEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 418 PQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 418 P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
-.+.|+||.++ +.|++++..+|++++.+.
T Consensus 1033 g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1033 GFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred ceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 47999999998 789999999999998864
No 46
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=98.77 E-value=1.5e-06 Score=99.73 Aligned_cols=156 Identities=17% Similarity=0.253 Sum_probs=88.9
Q ss_pred CCceEEEEEccC-----Ccee------c------------cccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHH
Q 008073 385 IGKMYEVVVTTY-----RGFY------R------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERD 438 (578)
Q Consensus 385 ~G~~YelVvTt~-----~GLy------R------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~ 438 (578)
+|+.+||+++.. .|+| + |++||++++.. .-.+.|+||.|+ +.|+++...+
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEEEEecccCeEecCCEEcCHHH
Confidence 589999999863 2333 1 78999999854 236899999998 8899999999
Q ss_pred HHHHHHHHHHHhccccCceeEEEEEe-ecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHHhhhcCC
Q 008073 439 LMSAMESFQMMLRNVMAVEIVEFAGY-TNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRGE 517 (578)
Q Consensus 439 v~~av~~~~~~l~~~~g~~l~~f~~~-~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g~ 517 (578)
|+.+|.+. . + +.+-+|+ .+.......-+.||.+..+ ...+.+..+++.+.+.+.| ...
T Consensus 537 IE~~l~~~----p---~--V~eaavvg~~~~~~ge~~~afVv~~~~---~~~~~~~~~~l~~~~~~~l---------~~~ 595 (652)
T TIGR01217 537 IYNAVERL----D---E--VRESLCIGQEQPDGGYRVVLFVHLAPG---ATLDDALLDRIKRTIRAGL---------SPR 595 (652)
T ss_pred HHHHHHhC----C---C--cceEEEEeeecCCCCEEEEEEEEECCC---CCCCHHHHHHHHHHHHhhC---------CCC
Confidence 99988864 1 2 2233332 1211112344577877543 1122222223333333333 112
Q ss_pred CCCcEEEEeC---CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 008073 518 ISPLSVSIVK---PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 565 (578)
Q Consensus 518 l~p~~v~~v~---~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 565 (578)
-.|-.|.+|+ ...=.+.++..+.+=.....++.+.-+.|++.++.+.+
T Consensus 596 ~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 596 HVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGTPVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred cCCCEEEECCCCCCCCCccChHHHHHHHHcCCCCCCcccccCHHHHHHHHH
Confidence 3566777764 11111222222222112234667788899999988754
No 47
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.77 E-value=2.3e-06 Score=95.60 Aligned_cols=129 Identities=15% Similarity=0.118 Sum_probs=77.8
Q ss_pred ccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHH
Q 008073 382 GVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 442 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~a 442 (578)
.+.+|+.+||+++.. .|.| .|+|||++++.. .-.+.|+||.++ +.|++++..+|+.+
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 356899999999763 2332 399999999843 237899999998 77999999999998
Q ss_pred HHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHHhhhcCCCCCcE
Q 008073 443 MESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRGEISPLS 522 (578)
Q Consensus 443 v~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~g~l~p~~ 522 (578)
|.+. ..+ ....+.-+ ..+.....-...+++|...+ .+...+.++...+.+.+ +......|-.
T Consensus 456 l~~~-~~v---~~~~vv~~--~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~l~~~~~~~l-------~~~~~~~p~~ 517 (545)
T PRK07768 456 AARV-EGV---RPGNAVAV--RLDAGHSREGFAVAVESNAF-----EDPAEVRRIRHQVAHEV-------VAEVGVRPRN 517 (545)
T ss_pred HHhC-ccc---ccceEEEE--EecCCCCceEEEEEEEeccc-----ccHHHHHHHHHHHHHHH-------HHHhCCCccE
Confidence 8774 212 12111111 11111112246677776432 22233334444444444 2122356778
Q ss_pred EEEeCCCcHH
Q 008073 523 VSIVKPGTFD 532 (578)
Q Consensus 523 v~~v~~G~f~ 532 (578)
|.+++.+.|+
T Consensus 518 v~~v~~~~lP 527 (545)
T PRK07768 518 VVVLGPGSIP 527 (545)
T ss_pred EEEeCCCcCC
Confidence 8888877765
No 48
>PRK07867 acyl-CoA synthetase; Validated
Probab=98.77 E-value=6.9e-07 Score=99.84 Aligned_cols=121 Identities=17% Similarity=0.155 Sum_probs=76.3
Q ss_pred EecCc-hHHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeecc
Q 008073 303 VTTGS-MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFS 381 (578)
Q Consensus 303 ~~~G~-~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ 381 (578)
+.+|. ..+-..++.+.+| ++++ +.||+||+.+.+...+...+. ......++ +++++++.. .
T Consensus 272 ~~gg~~~~~~~~~~~~~~g-~~l~-~~YG~TE~~~~~~~~~~~~~~-~~g~~~~~---~~i~~~~~~-------~----- 333 (529)
T PRK07867 272 VYGNEGAPGDIARFARRFG-CVVV-DGFGSTEGGVAITRTPDTPPG-ALGPLPPG---VAIVDPDTG-------T----- 333 (529)
T ss_pred EecCCCChHHHHHHHHHhC-CcEE-EeecccccccccccCCCCCCC-CcCCCCCC---EEEEECCCC-------C-----
Confidence 34443 3444556666674 8899 999999975433222111111 11112222 677765431 1
Q ss_pred ccCCCc------------eEEEEE-cc---CCcee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 382 GVEIGK------------MYEVVV-TT---YRGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 382 ele~G~------------~YelVv-Tt---~~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
++..|+ .+||++ .. ..|+| +|+|||++++.. .-.+.|+||.++ +
T Consensus 334 ~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR~~d~i~~ 409 (529)
T PRK07867 334 ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAYFAGRLGDWMRV 409 (529)
T ss_pred CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEEEeccccCeEEE
Confidence 123344 799998 33 24444 799999998853 236899999998 7
Q ss_pred cccccCHHHHHHHHHH
Q 008073 430 SFEIISERDLMSAMES 445 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~ 445 (578)
+|+|+.+.+|++++.+
T Consensus 410 ~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 410 DGENLGTAPIERILLR 425 (529)
T ss_pred CCEEeCHHHHHHHHHh
Confidence 8999999999998876
No 49
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.75 E-value=8.4e-07 Score=99.54 Aligned_cols=127 Identities=20% Similarity=0.215 Sum_probs=81.8
Q ss_pred eEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-eeecCCCC---CCCCcceeccCCceEEEEeeCCCCCccc
Q 008073 300 IKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDMEKNEA 372 (578)
Q Consensus 300 i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~~~~~~ 372 (578)
+.++++|+. ....+++++.++..+++ .+||.||+.. ........ .....+ ...|+ .-...++.+.
T Consensus 293 lr~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G-~~~pg-~~v~Ivd~~~----- 364 (534)
T COG0318 293 LRLVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVG-RPLPG-VEVRIVDPDG----- 364 (534)
T ss_pred eEEEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCccc-ccCCC-cEEEEEeCCC-----
Confidence 346677764 56667777888767788 9999999843 22211111 011111 12222 3445555443
Q ss_pred cCCceeeccccCCCceEEEEEcc---CCcee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---cccc
Q 008073 373 VGEETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFE 432 (578)
Q Consensus 373 ~~~~~l~~~ele~G~~YelVvTt---~~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gE 432 (578)
.+ +.+|+.+||+|-. ..|.| -|+|||+..+.. .-.+.|+||.++ ..||
T Consensus 365 --~~------~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~gR~kd~I~~gG~ 432 (534)
T COG0318 365 --GE------VLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVGRLKDLIISGGE 432 (534)
T ss_pred --Cc------cCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEeccceEEEeCCe
Confidence 11 2238899999943 24444 189999997754 256999999988 7789
Q ss_pred ccCHHHHHHHHHHH
Q 008073 433 IISERDLMSAMESF 446 (578)
Q Consensus 433 kv~e~~v~~av~~~ 446 (578)
++++.+|+.++.+.
T Consensus 433 ni~p~eiE~~l~~~ 446 (534)
T COG0318 433 NIYPEEIEAVLAEH 446 (534)
T ss_pred EECHHHHHHHHHhC
Confidence 99999999988875
No 50
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=98.75 E-value=1.2e-06 Score=97.02 Aligned_cols=127 Identities=14% Similarity=0.085 Sum_probs=82.0
Q ss_pred CCCceeEEEecCc---hHHHHHHHHHHhCCCCccccccccCceee-eeecCCC--CCCCCcceeccCCceEEEEeeCCCC
Q 008073 295 PNVRYIKCVTTGS---MSQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIA--QPPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 295 P~L~~i~~~~~G~---~~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
++++ .+++|+ ....++.+++.++ ++++ +.||+||+.. +...... ..+...++ ..++ .-+++++...
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~- 342 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWWG-PVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPG-AELRFVDEDG- 342 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-eeccccccCceEecCcccccccCCCcCc-cCCC-cEEEEECCCC-
Confidence 5555 445544 2556677778775 7888 9999999743 2211000 01111122 2333 3356666331
Q ss_pred CccccCCceeeccccCCCceEEEEEccCC----cee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTYR----GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~~----GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
.++..|+.+||+++..+ |++ -|+|||+++... .-.+.|+||.++
T Consensus 343 ------------~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~d~ik 406 (509)
T PRK12406 343 ------------RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKRDMVI 406 (509)
T ss_pred ------------CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeecccceEE
Confidence 24568999999997642 333 278999998854 236889999998
Q ss_pred ccccccCHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~ 445 (578)
++|+++++.+|+++|.+
T Consensus 407 ~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 407 SGGVNIYPAEIEAVLHA 423 (509)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 88999999999999875
No 51
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=98.75 E-value=1.3e-06 Score=97.40 Aligned_cols=128 Identities=12% Similarity=0.107 Sum_probs=80.4
Q ss_pred CCCCceeEEEecCc--h-HHHHHHHHHHhCCCCccccccccCcee-eeeecCCC---CCCCCcceeccCCceEEEEeeCC
Q 008073 294 WPNVRYIKCVTTGS--M-SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIA---QPPQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 294 WP~L~~i~~~~~G~--~-~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~---~~~~~~~~~l~~~~~f~EFip~~ 366 (578)
.|+++. +++|+ + .....++++.+| ++++ +.||+||+. ++...... ......+. ..++ .-++.++.+
T Consensus 309 ~~~l~~---~~~gG~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~g-~~v~i~~~~ 381 (538)
T TIGR03208 309 VPSLFT---FLCAGAPIPGILVERAWELLG-ALIV-SAWGMTENGAVTVTEPDDALEKASTTDGR-PLPG-VEVKVIDAN 381 (538)
T ss_pred CCcceE---EEEcCCCCCHHHHHHHHHHcC-CeEE-eeeccCcCCCccccCcccchhhccCcccc-cCCC-CEEEEECCC
Confidence 466663 34444 2 344455565564 8888 999999963 32211000 00000112 2223 345555533
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
+ .++..|+.+||+|++. .|.| .|+|||++++.. .-.+.|+||.++
T Consensus 382 --------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~ 444 (538)
T TIGR03208 382 --------G-----AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSKDVII 444 (538)
T ss_pred --------C-----CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccCceEE
Confidence 2 2356899999999775 3444 399999999843 337899999998
Q ss_pred ccccccCHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~ 445 (578)
+.|+|+.+.+|+.++.+
T Consensus 445 ~~G~~v~p~eIE~~l~~ 461 (538)
T TIGR03208 445 RGGENIPVVEIENLLYQ 461 (538)
T ss_pred ECCEEECHHHHHHHHhc
Confidence 78999999999999875
No 52
>PLN02246 4-coumarate--CoA ligase
Probab=98.74 E-value=1e-06 Score=98.32 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=81.5
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeee--eecCC--C---CCCCCcceeccCCceEEEEee
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVG--INLDI--A---QPPQTTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~--i~~~~--~---~~~~~~~~~l~~~~~f~EFip 364 (578)
+.++ .++.|+. ....+.+++.++++++. ..||+||+... .+... . ..+...+. ..++ .-.+.++
T Consensus 298 ~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d 371 (537)
T PLN02246 298 SSIR---MVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGT-VVRN-AELKIVD 371 (537)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccc-ccCC-cEEEEec
Confidence 4555 4444443 44556777777778888 89999997432 11110 0 00001111 1222 3455565
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCC
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAP 427 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~ 427 (578)
+++ . .++..|+.+||+|+.. .|.| -|+|||++++.. .-.+.|+||.+
T Consensus 372 ~~~-------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~d 435 (537)
T PLN02246 372 PET-------G-----ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIVDRLK 435 (537)
T ss_pred CCC-------C-----CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEEeccc
Confidence 432 1 2456899999999863 3332 378999999853 23689999999
Q ss_pred C---ccccccCHHHHHHHHHH
Q 008073 428 K---SSFEIISERDLMSAMES 445 (578)
Q Consensus 428 ~---l~gEkv~e~~v~~av~~ 445 (578)
+ +.|++++..+|++++.+
T Consensus 436 d~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 436 ELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred ceEEECCEEECcHHHHHHHHh
Confidence 8 88999999999988875
No 53
>PRK07787 acyl-CoA synthetase; Validated
Probab=98.73 E-value=2.5e-06 Score=93.58 Aligned_cols=129 Identities=18% Similarity=0.173 Sum_probs=77.8
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC--CCCcceeccCCceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP--PQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~--~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
.++++ .+.+|+. ....+++++.++ ++++ +.||.||+.+.+......+ +. ......++ .-.++++.+
T Consensus 240 l~~l~---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~-~vG~~~~g-~~~~i~d~~-- 310 (471)
T PRK07787 240 LRGAR---LLVSGSAALPVPVFDRLAALTG-HRPV-ERYGMTETLITLSTRADGERRPG-WVGLPLAG-VETRLVDED-- 310 (471)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHHcC-CCee-cccCccccCcceecCCCCcccCC-cccccCCC-cEEEEECCC--
Confidence 35555 4455542 444566777675 7888 9999999854331111110 00 01112222 334455433
Q ss_pred CccccCCceeeccccCCCc-eEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeC-CC-
Q 008073 369 KNEAVGEETVDFSGVEIGK-MYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRA-PK- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~-~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~-~~- 428 (578)
+..+. ..|+ .+||+++.. .|.| -|+|||++.+.. .-.+.++||. ++
T Consensus 311 ------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~GR~~d~~ 376 (471)
T PRK07787 311 ------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIVGRESTDL 376 (471)
T ss_pred ------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEeCCCCcee
Confidence 12221 1343 689999874 3433 299999998843 3478999996 55
Q ss_pred --ccccccCHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~ 445 (578)
+.|+|+++.+|+++|.+
T Consensus 377 i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 377 IKSGGYRIGAGEIETALLG 395 (471)
T ss_pred EeeCCEEECHHHHHHHHHh
Confidence 88999999999999875
No 54
>PRK07470 acyl-CoA synthetase; Validated
Probab=98.73 E-value=3.7e-06 Score=93.39 Aligned_cols=129 Identities=15% Similarity=0.092 Sum_probs=79.6
Q ss_pred cCCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC----------CCCCCcceeccCCceE
Q 008073 293 LWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA----------QPPQTTRFVMLPTAAY 359 (578)
Q Consensus 293 lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~----------~~~~~~~~~l~~~~~f 359 (578)
..++++ .+++|+. .....++.+.+| .+++ +.||+||+...+...+. ......+. ..++ .-
T Consensus 278 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~g-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~g-~~ 350 (528)
T PRK07470 278 DHSSLR---YVIYAGAPMYRADQKRALAKLG-KVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGF-ERTG-ME 350 (528)
T ss_pred CCcceE---EEEEcCCCCCHHHHHHHHHHhC-cHHH-HhCCCcccCCceeecchhhccccccccceeeccCc-ccCC-cE
Confidence 456776 3344432 344455556665 7788 89999996332211100 00000011 1122 23
Q ss_pred EEEeeCCCCCccccCCceeeccccCCCceEEEEEccC---Cceec-------------cccCCEEEEeeeeCCCCEEEEE
Q 008073 360 FEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 360 ~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~ 423 (578)
++.++.+ + .++..|+.+||+|++. .|.|. |+|||++++.. ...+.+.
T Consensus 351 ~~i~d~~--------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~ 413 (528)
T PRK07470 351 VQIQDDE--------G-----RELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGFLYIT 413 (528)
T ss_pred EEEECCC--------C-----CCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCeEEEe
Confidence 4555532 1 3456899999999764 33332 99999988753 3579999
Q ss_pred eeCCC---ccccccCHHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
||.++ +.|++++..+|+.+|.+
T Consensus 414 GR~dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 414 GRASDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred CCccceEEeCCEEECHHHHHHHHHh
Confidence 99998 78999999999998875
No 55
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.72 E-value=6.6e-07 Score=110.19 Aligned_cols=129 Identities=19% Similarity=0.257 Sum_probs=80.1
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCC---------CcceeccCCceEEE
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ---------TTRFVMLPTAAYFE 361 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~---------~~~~~l~~~~~f~E 361 (578)
.++++. ++.|+. ....+++++.+ +++++ +.||.||+.+.....+.++.. ..+. ..++.. +.
T Consensus 716 ~~~lr~---i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~-~~ 788 (1296)
T PRK10252 716 CASLRQ---VFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGY-PVWNTG-LR 788 (1296)
T ss_pred CCCccE---EEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccc-ccCCCE-EE
Confidence 356663 344442 33445555555 58899 999999975433222111100 0111 122322 23
Q ss_pred EeeCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------------ccccCCEEEEeeeeCCCC
Q 008073 362 FLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------------RYRLGDIVKVVDFYNSSP 418 (578)
Q Consensus 362 Fip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------------RYr~GDvV~v~g~~~~~P 418 (578)
.++.. . ..+..|+.+||+|+.. .|.+ -|+|||++++.. .-
T Consensus 789 i~d~~--------~-----~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----~G 851 (1296)
T PRK10252 789 ILDAR--------M-----RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD----DG 851 (1296)
T ss_pred EECCC--------C-----CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC----CC
Confidence 34322 2 2356899999999874 2322 299999999853 24
Q ss_pred EEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 419 QVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 419 ~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.++|+||.|+ ++|+++...+|+.+|.+.
T Consensus 852 ~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 852 AVEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred cEEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 7999999987 999999999999999864
No 56
>PRK12583 acyl-CoA synthetase; Provisional
Probab=98.72 E-value=5.9e-06 Score=92.27 Aligned_cols=157 Identities=16% Similarity=0.155 Sum_probs=94.2
Q ss_pred CCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCC-----CCcceeccCCceEEEEeeCC
Q 008073 294 WPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-----QTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 294 WP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~-----~~~~~~l~~~~~f~EFip~~ 366 (578)
+++++.+ +.+|. .....+.+.+.+++.++. ..||+||+....-....++. ...+. ..+ ...++.++++
T Consensus 316 ~~~lr~i--~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~-~~~~~i~d~~ 390 (558)
T PRK12583 316 LSSLRTG--IMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQP-HLEVKVVDPD 390 (558)
T ss_pred chhheEE--EecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCC-CCeEEEECCC
Confidence 4667633 33443 244456667777766787 89999997432111111100 00111 222 3456667654
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
. .++..|+.+||+|++. .|+| .|+|||++++.. .-.+.|.||.++
T Consensus 391 ~-------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~GR~~~~ 453 (558)
T PRK12583 391 G-------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVGRSKDM 453 (558)
T ss_pred C-------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEecccce
Confidence 2 3467899999999764 2333 389999999843 237899999998
Q ss_pred --ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEee
Q 008073 429 --SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIR 481 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~ 481 (578)
+.|+|++..+|++++.+. .+ +.+.++.. +........+.+++..
T Consensus 454 i~~~G~~v~~~~IE~~l~~~-------~~--v~~~~v~~~~~~~~~~~~~~~v~~~ 500 (558)
T PRK12583 454 IIRGGENIYPREIEEFLFTH-------PA--VADVQVFGVPDEKYGEEIVAWVRLH 500 (558)
T ss_pred eEECCEEeCHHHHHHHHHhC-------CC--eeEEEEEeeecCCCCcEEEEEEEEC
Confidence 779999999999888752 22 34555432 1111123456777764
No 57
>PLN03051 acyl-activating enzyme; Provisional
Probab=98.71 E-value=6.3e-06 Score=91.38 Aligned_cols=41 Identities=22% Similarity=0.066 Sum_probs=35.4
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
.|+|||++++.. .-.+.|+||.++ +.|+++++.+|+++|.+
T Consensus 358 ~~~TGDlg~~d~----dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 358 LRRHGDIMKRTP----GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eeecCCeEEECC----CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 389999999853 237899999998 88999999999999985
No 58
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.71 E-value=3.3e-06 Score=96.43 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=48.7
Q ss_pred ccCCCceEEEEEccC---Ccee-------------------------------ccccCCEEEEeeeeCCCCEEEEEeeCC
Q 008073 382 GVEIGKMYEVVVTTY---RGFY-------------------------------RYRLGDIVKVVDFYNSSPQVEFVMRAP 427 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy-------------------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~ 427 (578)
++..|+.+||+|... .|.| -|+|||++++. .-.+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 467899999999762 3322 38999999883 23699999999
Q ss_pred C---ccccccCHHHHHHHHHHH
Q 008073 428 K---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 428 ~---l~gEkv~e~~v~~av~~~ 446 (578)
+ +.|+++++.+|+.+|.+.
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhc
Confidence 8 889999999999999864
No 59
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=98.70 E-value=7.5e-06 Score=91.17 Aligned_cols=186 Identities=17% Similarity=0.126 Sum_probs=111.6
Q ss_pred ccCCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC---CCCCCcceeccCCceEEEEeeC
Q 008073 292 KLWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA---QPPQTTRFVMLPTAAYFEFLPF 365 (578)
Q Consensus 292 ~lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~---~~~~~~~~~l~~~~~f~EFip~ 365 (578)
...+.|+ .+.|.+. ..-...+.+.+| +++. ++||.||...++ +.+. .+++ .....|. .-.+.++.
T Consensus 287 ~dlssLr---~~~SaGEPLnpe~~~w~~~~~g-~~i~-d~~gqTEtg~~~-~~~~~~~~~g~--~g~p~pG-~~~~vvdd 357 (528)
T COG0365 287 YDLSSLR---VLGSAGEPLNPEAFEWFYSALG-VWIL-DIYGQTETGMGF-IAGRPPVKNGS--SGLPLPG-YAVRRVDD 357 (528)
T ss_pred ccchhhe---eeeccCCCCCHHHHHHHHHHhC-CCEe-ccccccccCccc-cCCCCCcCCCC--CCCCCCC-ceeEEECC
Confidence 4556666 4466554 333455556666 9999 999999976221 1111 1222 2223333 45677775
Q ss_pred CCCCccccCCceeeccccCCCceEEEEEccC-----Cceec-------------cccCCEEEEeeeeCCCCEEEEEeeCC
Q 008073 366 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAP 427 (578)
Q Consensus 366 ~~~~~~~~~~~~l~~~ele~G~~YelVvTt~-----~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~ 427 (578)
+ . .++.+|+ ++|||... -|+|+ |.+||.....- --.|.|+||.|
T Consensus 358 ~-g------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i~GR~D 419 (528)
T COG0365 358 E-G------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWLHGRSD 419 (528)
T ss_pred C-C------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEEEeecc
Confidence 5 2 3456788 99999864 34665 99999988853 35899999999
Q ss_pred C---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHH
Q 008073 428 K---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLED 503 (578)
Q Consensus 428 ~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~ 503 (578)
+ +.|..+...+|+++|.+.. .+.|-.|+. +.....---..||=++++ ..+. +++++|.+
T Consensus 420 DvI~vsG~Rig~~EvE~~l~~hP---------~VaEaAvVg~pd~~kg~~v~afVvL~~g-----~~~~---~L~~ei~~ 482 (528)
T COG0365 420 DVIKVSGKRIGPLEIESVLLAHP---------AVAEAAVVGVPDPGKGQIVLAFVVLAAG-----VEPN---ELAEEIRR 482 (528)
T ss_pred ceEeccCeeccHHHHHHHHHhCc---------ceeeeEEEeccCCCCCcEEEEEEEecCC-----CChH---HHHHHHHH
Confidence 9 8899999999999998642 233444432 121111112346656654 2222 34555555
Q ss_pred HhChhHHHhhhcCCC-CCcEEEEeC
Q 008073 504 AFGSIYKVQRDRGEI-SPLSVSIVK 527 (578)
Q Consensus 504 ~Ln~~Y~~~R~~g~l-~p~~v~~v~ 527 (578)
.+ ++..+-+ .|.+|.+|+
T Consensus 483 ~v------r~~~~~~~~p~~i~fv~ 501 (528)
T COG0365 483 HV------ARNIGPHAIPRKIRFVD 501 (528)
T ss_pred HH------HhccCcccCCceEEEec
Confidence 44 1123333 677888875
No 60
>PRK07638 acyl-CoA synthetase; Validated
Probab=98.70 E-value=3.5e-07 Score=100.54 Aligned_cols=125 Identities=16% Similarity=0.071 Sum_probs=83.6
Q ss_pred EEecCc--hHHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC---CCCcceeccCCceEEEEeeCCCCCccccCCc
Q 008073 302 CVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 376 (578)
Q Consensus 302 ~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 376 (578)
.+.+|+ ......++++.+|+++++ +.||+||+........... ....+. ..+ ...++.++.+ +
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~--------g- 325 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGR-PFH-NVQVRICNEA--------G- 325 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCc-ccC-CcEEEEECCC--------C-
Confidence 445555 245557778888889999 8999999843322111110 011122 222 3456777643 2
Q ss_pred eeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHH
Q 008073 377 TVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISER 437 (578)
Q Consensus 377 ~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~ 437 (578)
.++++|+.+||+|++. .|.| .|+|||++++.. .-.+.|+||.++ +.|++++..
T Consensus 326 ----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~G~~v~~~ 397 (487)
T PRK07638 326 ----EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFGGINIFPE 397 (487)
T ss_pred ----CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeCCEEECHH
Confidence 2457899999999874 3333 478999988743 457899999998 789999999
Q ss_pred HHHHHHHHH
Q 008073 438 DLMSAMESF 446 (578)
Q Consensus 438 ~v~~av~~~ 446 (578)
+|++++.+.
T Consensus 398 eiE~~l~~~ 406 (487)
T PRK07638 398 EIESVLHEH 406 (487)
T ss_pred HHHHHHHhC
Confidence 999988753
No 61
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=98.69 E-value=2.7e-06 Score=94.82 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=48.2
Q ss_pred cCCCceEEEEEccC---Ccee---------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 383 VEIGKMYEVVVTTY---RGFY---------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 383 le~G~~YelVvTt~---~GLy---------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
+..|+.+||+|... .|.| -|+|||+++.. .-.+.|+||.++ +.|++++..+|+++|.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 66899999999764 3444 38999999873 126899999998 889999999999988864
No 62
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=98.69 E-value=1.2e-06 Score=97.73 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=79.8
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCC----CCcceeccCCceEEEEeeCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP----QTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~----~~~~~~l~~~~~f~EFip~~ 366 (578)
.++++ ++..|+. ....+++.+.+| ++++ +.||.||+.+..... ..+. ......+.++ ...+.++.+
T Consensus 299 ~~~l~---~v~~gg~~l~~~~~~~~~~~~g-~~~~-~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~~~-~~v~i~d~~ 371 (536)
T PRK10946 299 LASLK---LLQVGGARLSETLARRIPAELG-CQLQ-QVFGMAEGLVNYTRL-DDSDERIFTTQGRPMSPD-DEVWVADAD 371 (536)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHhcC-CeEE-EeecccccceeeecC-CCccccccccCCcccCCC-ceEEEECCC
Confidence 46666 4455553 334455556664 8998 999999975543211 1100 0011111122 223444322
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
+ .++..|+.+||+|+.. .|.| -|+|||+.+... .-.+.|+||.++
T Consensus 372 --------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~~d~ 434 (536)
T PRK10946 372 --------G-----NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGREKDQ 434 (536)
T ss_pred --------C-----CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccccce
Confidence 2 2356899999999763 3333 389999998853 235899999998
Q ss_pred --ccccccCHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~ 445 (578)
+.|++++..+|+.+|.+
T Consensus 435 i~~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 435 INRGGEKIAAEEIENLLLR 453 (536)
T ss_pred eecCCEEEcHHHHHHHHHh
Confidence 88999999999998875
No 63
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=98.67 E-value=3e-06 Score=94.92 Aligned_cols=130 Identities=14% Similarity=0.167 Sum_probs=80.5
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC-CCCc-ceeccCCceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP-PQTT-RFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~-~~~~-~~~l~~~~~f~EFip~~~~ 368 (578)
+++++ .+.+|+. ....+.+++.+| ++++ +.||+||+...+...+... ...+ .....+ ..-...++.+
T Consensus 328 l~~lr---~v~~gG~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~-~~~v~i~d~~-- 399 (560)
T PRK08751 328 FSSLK---MTLGGGMAVQRSVAERWKQVTG-LTLV-EAYGLTETSPAACINPLTLKEYNGSIGLPIP-STDACIKDDA-- 399 (560)
T ss_pred hhhhe---eeeeCCCCCCHHHHHHHHHHhC-CeEE-EeeccccCCCceecccccccccCCCcCccCC-CceEEEECCC--
Confidence 45666 3344442 444456677664 8888 8999999744332111100 0001 111222 2334445422
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
+ .++..|+.+||+|++. .|+| -|+|||++++.. .-.+.++||.++
T Consensus 400 ------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~~d~i~ 464 (560)
T PRK08751 400 ------G-----TVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRKKDMIL 464 (560)
T ss_pred ------C-----CCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeechhhee
Confidence 2 2356788999999774 2333 189999999843 347899999998
Q ss_pred ccccccCHHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++++.+|+.++.+.
T Consensus 465 ~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 465 VSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred ECCEEEcHHHHHHHHHhC
Confidence 779999999999998754
No 64
>PRK05850 acyl-CoA synthetase; Validated
Probab=98.65 E-value=4.8e-06 Score=93.73 Aligned_cols=127 Identities=16% Similarity=0.223 Sum_probs=76.2
Q ss_pred cccCCCceEEEEEccC---Ccee-------------------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 381 SGVEIGKMYEVVVTTY---RGFY-------------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 381 ~ele~G~~YelVvTt~---~GLy-------------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
.++..|+.+||.|... .|.| -|+|||++.+.. -.+.|+||.++ +
T Consensus 390 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~~-----G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 390 IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFISE-----GELFIVGRIKDLLIV 464 (578)
T ss_pred cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEEC-----CEEEEEcccccEEEE
Confidence 3467899999999764 2333 489999997631 37999999998 8
Q ss_pred cccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEeecCccccCCCHH---HHHHHHHHHHHHhC
Q 008073 430 SFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVA---ILRRCCSSLEDAFG 506 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~---~l~~~~~~ld~~Ln 506 (578)
.|++++..+|+.++.+.. +....-+. +++.. ....+.+|+++... ..+.+ .+..+.+.+...+
T Consensus 465 ~G~~i~p~eIE~~l~~~~-------~~~~~v~~-v~~~~--~~~~~a~v~~~~~~---~~~~~~~~~~~~l~~~v~~~l- 530 (578)
T PRK05850 465 DGRNHYPDDIEATIQEIT-------GGRVAAIS-VPDDG--TEKLVAIIELKKRG---DSDEEAMDRLRTVKREVTSAI- 530 (578)
T ss_pred CCeecCHHHHHHHHHHhc-------CCcEEEEE-ecCCC--ceEEEEEEEecccc---CcchhhhhhHHHHHHHHHHHH-
Confidence 899999999999988642 22222221 22322 23345667665321 11111 1233333333333
Q ss_pred hhHHHhhhcCCCCCcEEEEeCCCcHH
Q 008073 507 SIYKVQRDRGEISPLSVSIVKPGTFD 532 (578)
Q Consensus 507 ~~Y~~~R~~g~l~p~~v~~v~~G~f~ 532 (578)
.. ...+.|..+.+|+.++|+
T Consensus 531 ---~~---~~~~~~~~~~~~~~~~iP 550 (578)
T PRK05850 531 ---SK---SHGLSVADLVLVAPGSIP 550 (578)
T ss_pred ---HH---HhCCCceEEEEeCCCCcC
Confidence 21 223567778888877665
No 65
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=98.65 E-value=2.6e-06 Score=94.74 Aligned_cols=129 Identities=16% Similarity=0.145 Sum_probs=80.2
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC---CCCcceeccCCceEEEEeeCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
++++ ++++|+. .....++++.+| ++++ +.||.||+.+....-.... ....++.+. .....+.++.+
T Consensus 299 ~~lr---~~~~gG~~l~~~~~~~~~~~~g-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~-~~~~v~i~d~~-- 370 (527)
T TIGR02275 299 SSLK---LLQVGGAKFSEAAARRVPAVFG-CQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMS-PDDEVRVVDDH-- 370 (527)
T ss_pred cceE---EEEEcCCCCCHHHHHHHHHHhC-CeEE-eeeccCccCccccCCCCccccccccCCCCCC-CCceEEEECCC--
Confidence 4555 4555553 444456666674 8988 9999999754321100000 000122221 12234555432
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
++ .+..|+.+||+++.. .|.| -|+|||++++.. ..++.|+||.++
T Consensus 371 ------g~-----~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~d~i~ 435 (527)
T TIGR02275 371 ------GN-----PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAKDQIN 435 (527)
T ss_pred ------CC-----CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEecccceee
Confidence 22 245899999999753 3333 299999999843 346889999998
Q ss_pred ccccccCHHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~ 446 (578)
++|+++++.+|+++|.+.
T Consensus 436 ~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 436 RGGEKIAAEEIENLLLAH 453 (527)
T ss_pred cCCEEECHHHHHHHHHhC
Confidence 789999999999888753
No 66
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=98.65 E-value=1.7e-05 Score=89.21 Aligned_cols=127 Identities=15% Similarity=0.206 Sum_probs=79.3
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCcee-eee-ecCCC-CCCCCcceeccCCceEEEEeeCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGI-NLDIA-QPPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i-~~~~~-~~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
++++ .+.+|+. ......+++.+| ++++ ..||+||+. +.. +.... ......+. ..++ .=+++++++
T Consensus 333 ~~lr---~~~~gG~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~-~~v~ivd~~-- 403 (562)
T PRK12492 333 SALK---LTNSGGTALVKATAERWEQLTG-CTIV-EGYGLTETSPVASTNPYGELARLGTVGI-PVPG-TALKVIDDD-- 403 (562)
T ss_pred ccee---EEEeccccCCHHHHHHHHHHhC-Ccee-eccCccccCceeeecCCcccccCCccce-ecCC-CEEEEECCC--
Confidence 4555 3344442 444456666664 8998 999999963 222 11100 00011112 2222 235566543
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
+ ..+.+|+.+||+|+.. .|.| .|+|||++++.. .-.+.|+||.++
T Consensus 404 ------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~~~i~ 468 (562)
T PRK12492 404 ------G-----NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKKDLII 468 (562)
T ss_pred ------C-----CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccCCeEE
Confidence 2 2356799999999864 2333 399999999854 237899999998
Q ss_pred ccccccCHHHHHHHHHH
Q 008073 429 SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~ 445 (578)
+.|+++++.+|+.++.+
T Consensus 469 ~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 469 VSGFNVYPNEIEDVVMA 485 (562)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 78999999999998875
No 67
>PRK08315 AMP-binding domain protein; Validated
Probab=98.64 E-value=3.3e-06 Score=94.39 Aligned_cols=131 Identities=16% Similarity=0.139 Sum_probs=81.5
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeee-ecCCCCC----CCCcceeccCCceEEEEeeC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQP----PQTTRFVMLPTAAYFEFLPF 365 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i-~~~~~~~----~~~~~~~l~~~~~f~EFip~ 365 (578)
.|+++ +++.|+. ......+.+.++..+++ +.||.||+.... ......+ ....+. ..++ .-++.+++
T Consensus 314 ~~~lr---~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~v~i~d~ 387 (559)
T PRK08315 314 LSSLR---TGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGR-ALPH-LEVKIVDP 387 (559)
T ss_pred chhhh---eeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCc-cCCC-cEEEEEcC
Confidence 45666 3343332 34455666777656688 899999974322 1110000 000111 2233 45666765
Q ss_pred CCCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC
Q 008073 366 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK 428 (578)
Q Consensus 366 ~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~ 428 (578)
++ + ..+..|+.+||+|... .|+| .|+|||+++... .-.+.|+||.++
T Consensus 388 ~~-------~-----~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~d~ 451 (559)
T PRK08315 388 ET-------G-----ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVGRIKD 451 (559)
T ss_pred cc-------C-----CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEeeccc
Confidence 53 2 2345899999999664 2222 499999998843 236899999988
Q ss_pred ---ccccccCHHHHHHHHHHH
Q 008073 429 ---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 ---l~gEkv~e~~v~~av~~~ 446 (578)
+.|++++..+|++++.+.
T Consensus 452 ~i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 452 MIIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred eEEECCEEEcHHHHHHHHHhC
Confidence 889999999999888753
No 68
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=98.64 E-value=7.6e-06 Score=90.48 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=75.0
Q ss_pred HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCCCCCCcc-eeccCCceEEEEeeCCCCCccccCCceeeccccCCC
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQPPQTTR-FVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIG 386 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~~~~~~~-~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~G 386 (578)
....+.+++.+| ++++ +.||+||.. ++. .....+...+. ....+ ..-++.++ ++ + ..+.+|
T Consensus 292 ~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~-~~~~~~~~~~~~G~~~~-g~~v~i~d-~~-------~-----~~~~~g 354 (508)
T TIGR02262 292 AEVGQRWQARFG-VDIV-DGIGSTEMLHIFL-SNLPGDVRYGTSGKPVP-GYRLRLVG-DG-------G-----QDVAAG 354 (508)
T ss_pred HHHHHHHHHHhC-Cchh-hCccccccCceee-cCCccCCCCCCcCCCCC-CcEEEEEC-CC-------C-----CCCCCC
Confidence 344466666675 8898 999999974 322 11111100000 01222 23366676 32 2 234689
Q ss_pred ceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 387 KMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 387 ~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
+.+||+|++. .|+| .|+|||+.+... .-.+.|+||.++ +.|++++..+|++++.+.
T Consensus 355 ~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~ 429 (508)
T TIGR02262 355 EPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDMLKVSGIYVSPFEIESALIQH 429 (508)
T ss_pred CeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccceeeeCCEEECHHHHHHHHHhC
Confidence 9999999874 3332 479999988732 336899999998 789999999999988753
No 69
>PRK12467 peptide synthase; Provisional
Probab=98.64 E-value=6.6e-07 Score=120.69 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=81.6
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCC---C---CcceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP---Q---TTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~---~---~~~~~l~~~~~f~EFip 364 (578)
.|.|+ .++.|+. ....+++++.++++.++ +.||.||+.+.......... + .......++.. .-.++
T Consensus 3350 ~~~lr---~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~-~~v~d 3424 (3956)
T PRK12467 3350 CASLD---IYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRS-IYVLD 3424 (3956)
T ss_pred CCCce---EEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCccccCCCE-EEEEC
Confidence 46666 4455553 33445556667778899 99999998654321111000 0 00111222221 11222
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC---Cceec---------------------cccCCEEEEeeeeCCCCEE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR---------------------YRLGDIVKVVDFYNSSPQV 420 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLyR---------------------Yr~GDvV~v~g~~~~~P~i 420 (578)
.+ + ..+.+|+.+||+|... .|.|. |||||++++.. .-.+
T Consensus 3425 ~~--------~-----~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----dG~l 3487 (3956)
T PRK12467 3425 GQ--------L-----NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA----DGVI 3487 (3956)
T ss_pred CC--------C-----CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC----CCcE
Confidence 11 2 2356899999999663 34331 99999999853 3479
Q ss_pred EEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 421 EFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 421 ~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
+|+||.|+ |+|.++...+|+.++.+.
T Consensus 3488 ~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3488 EYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred EEeccccceEeeceEeecHHHHHHHHhhC
Confidence 99999998 999999999999998763
No 70
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=98.64 E-value=1.5e-05 Score=87.83 Aligned_cols=119 Identities=18% Similarity=0.126 Sum_probs=75.1
Q ss_pred HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCC--CCcceeccCCceEEEEeeCCCCCccccCCceeeccccCCC
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP--QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIG 386 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~--~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~G 386 (578)
....+.+++.+++++++ +.||.||+.......+.... ........++ ..+..++.+ + ..+..|
T Consensus 288 ~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~-~~~~i~~~~--------~-----~~~~~~ 352 (515)
T TIGR03098 288 RATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPN-AEVLVLRED--------G-----SECAPG 352 (515)
T ss_pred HHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcceecCC-CEEEEECCC--------C-----CCCCCC
Confidence 45556777778778898 99999997432222211100 0011112222 344555532 2 234568
Q ss_pred ceEEEEEccC---Ccee-------------------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccC
Q 008073 387 KMYEVVVTTY---RGFY-------------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIIS 435 (578)
Q Consensus 387 ~~YelVvTt~---~GLy-------------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~ 435 (578)
+.+||++.+. .|.| .|+|||++++.. .-.+.|.||.++ +.|++++
T Consensus 353 ~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~ 428 (515)
T TIGR03098 353 EEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE----EGFLYFVGRRDEMIKTSGYRVS 428 (515)
T ss_pred CceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC----CceEEEEeccccceecCCEEeC
Confidence 8899999663 3332 378999998733 236889999988 7799999
Q ss_pred HHHHHHHHHHH
Q 008073 436 ERDLMSAMESF 446 (578)
Q Consensus 436 e~~v~~av~~~ 446 (578)
..+|++++.+.
T Consensus 429 ~~eiE~~l~~~ 439 (515)
T TIGR03098 429 PTEVEEVAYAT 439 (515)
T ss_pred HHHHHHHHhcC
Confidence 99999888753
No 71
>PRK13383 acyl-CoA synthetase; Provisional
Probab=98.63 E-value=2.3e-06 Score=95.03 Aligned_cols=128 Identities=16% Similarity=0.113 Sum_probs=80.8
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCC---CCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
+|.++ .+++|+. ...+.++++.+| ++++ +.||+||+....-..+.. .+...+. ..++ .-+++++.+.
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~g-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~ 363 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTYG-DILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVAG-CPVRILDRNN 363 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHcC-chhh-hcccccccccceeccccccccCCCcccC-CCCC-cEEEEECCCC
Confidence 46665 4455543 445566677775 7888 999999974322111110 0000111 1222 3466665331
Q ss_pred CCccccCCceeeccccCCCceEEEEEccCCc---ee----------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccc
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTYRG---FY----------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 431 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~~G---Ly----------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~g 431 (578)
.++.+|+.+||++++..- ++ .|+|||+++... .-.+.|+||.++ +.|
T Consensus 364 -------------~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i~~~G 426 (516)
T PRK13383 364 -------------RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMIISGG 426 (516)
T ss_pred -------------CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceEEECC
Confidence 235678999999986533 33 356999999854 236889999998 889
Q ss_pred cccCHHHHHHHHHH
Q 008073 432 EIISERDLMSAMES 445 (578)
Q Consensus 432 Ekv~e~~v~~av~~ 445 (578)
+++++.+|++++.+
T Consensus 427 ~~v~~~eiE~~l~~ 440 (516)
T PRK13383 427 ENVYPRAVENALAA 440 (516)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999998875
No 72
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.63 E-value=3.7e-06 Score=94.32 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=82.3
Q ss_pred CCCceeEEEecCc--h-HHHHHHHHHHhCCCCccccccccCceee-eeec--CCCCCCCCcceeccCCceEEEEeeCCCC
Q 008073 295 PNVRYIKCVTTGS--M-SQYCSKIKYYAGEVPVLGGDYFASECYV-GINL--DIAQPPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 295 P~L~~i~~~~~G~--~-~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~--~~~~~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
+.++ .+.+|+ + .....++++.++ ++++ +.||+||+.. +... .....+. ......++. -.+.+++++
T Consensus 323 ~~lr---~v~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~~-~~~i~~~~~- 394 (563)
T PRK06710 323 SSIR---ACISGSAPLPVEVQEKFETVTG-GKLV-EGYGLTESSPVTHSNFLWEKRVPG-SIGVPWPDT-EAMIMSLET- 394 (563)
T ss_pred hhhh---heeeCCCcCCHHHHHHHHHhhC-CCEe-cccccccCccccccCcccccccCC-ccCCCCCCC-eEEEEECCC-
Confidence 5565 334444 2 444566666664 8888 8999999743 2110 0000111 112233443 356666543
Q ss_pred CccccCCceeeccccCCCceEEEEEccC---Cceec-------------cccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
+ ..+..|+.+||+|++. .|.|. |+|||++.... .-.+.|+||.++ +
T Consensus 395 ------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd~i~~ 459 (563)
T PRK06710 395 ------G-----EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKDMIVA 459 (563)
T ss_pred ------C-----ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeeccccEEEE
Confidence 2 2356899999999874 33432 99999998743 347999999988 8
Q ss_pred cccccCHHHHHHHHHHH
Q 008073 430 SFEIISERDLMSAMESF 446 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~~ 446 (578)
.|+|+++.+|++++.+.
T Consensus 460 ~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 460 SGFNVYPREVEEVLYEH 476 (563)
T ss_pred CCEEECHHHHHHHHHhC
Confidence 89999999999999764
No 73
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=98.62 E-value=8.4e-07 Score=99.80 Aligned_cols=58 Identities=10% Similarity=0.172 Sum_probs=46.6
Q ss_pred CCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHH
Q 008073 385 IGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAME 444 (578)
Q Consensus 385 ~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~ 444 (578)
+|+.+||+|... .|.| -|+|||++++.. .-.+.|+||.++ +.|+++++.+|++++.
T Consensus 382 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 382 SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 689999999764 3333 379999999843 346889999998 7899999999999887
Q ss_pred HH
Q 008073 445 SF 446 (578)
Q Consensus 445 ~~ 446 (578)
+.
T Consensus 458 ~~ 459 (563)
T PLN02860 458 QH 459 (563)
T ss_pred hC
Confidence 53
No 74
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.61 E-value=1.5e-07 Score=98.34 Aligned_cols=117 Identities=21% Similarity=0.261 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCC----CCcceeccCCceEEEEeeCCCCCccccCCceeeccccC
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP----QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVE 384 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~----~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele 384 (578)
+..+.++...+| +.++ ..+|-.||.+.+.--. .++ ...+..+.|+.- .=.++.+ + .+|.
T Consensus 319 ~~~Arrv~~~lg-C~LQ-QVFGMAEGLvnyTRLD-Dp~E~i~~TQGrPlsP~DE-vrvvD~d--------g-----~pv~ 381 (542)
T COG1021 319 ATLARRVPAVLG-CQLQ-QVFGMAEGLVNYTRLD-DPPEIIIHTQGRPLSPDDE-VRVVDAD--------G-----NPVA 381 (542)
T ss_pred HHHHhhchhhhC-chHH-HHhhhhhhhhcccccC-CchHheeecCCCcCCCcce-eEEecCC--------C-----CCCC
Confidence 555567777775 8888 8999999987653111 111 112333444431 1122222 2 3467
Q ss_pred CCceEEEEE---ccCCceec--------------cccCCEEEEeeeeCCCCEEEEEeeCCC-cc--ccccCHHHHHHHHH
Q 008073 385 IGKMYEVVV---TTYRGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK-SS--FEIISERDLMSAME 444 (578)
Q Consensus 385 ~G~~YelVv---Tt~~GLyR--------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~-l~--gEkv~e~~v~~av~ 444 (578)
+||.++|.. -|..|.|| ||+||+|+.+. .--+.+.||.++ |+ |||+..++|++.+.
T Consensus 382 pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~----dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL 457 (542)
T COG1021 382 PGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDP----DGYLVVEGRVKDQINRGGEKIAAEEVENLLL 457 (542)
T ss_pred CCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecC----CceEEEEeeehhhhccccchhhHHHHHHHHh
Confidence 999999988 56799997 99999999954 347899999998 54 79999999998887
Q ss_pred HH
Q 008073 445 SF 446 (578)
Q Consensus 445 ~~ 446 (578)
+-
T Consensus 458 ~H 459 (542)
T COG1021 458 RH 459 (542)
T ss_pred hC
Confidence 64
No 75
>PRK12467 peptide synthase; Provisional
Probab=98.61 E-value=1.9e-06 Score=116.35 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=80.3
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecC---CCCCCC--CcceeccCCceEEEEeeCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLD---IAQPPQ--TTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~---~~~~~~--~~~~~l~~~~~f~EFip~~ 366 (578)
++++ .++.||. ....+++.+.+++++++ +.||.||+.+.+... ...... .......++. -+..++.+
T Consensus 771 ~~lr---~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~i~d~~ 845 (3956)
T PRK12467 771 RPQR---ALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQPLANL-GLYILDHY 845 (3956)
T ss_pred Cccc---EEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccCCcCCC-EEEEECCC
Confidence 4455 3344443 34445555656679999 999999985432111 110000 0011122332 23344422
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee---------------------ccccCCEEEEeeeeCCCCEEEE
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQVEF 422 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy---------------------RYr~GDvV~v~g~~~~~P~i~f 422 (578)
. ..+.+|+.+||+|+.. .|.| -|||||+++... .-.++|
T Consensus 846 --------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----dG~l~~ 908 (3956)
T PRK12467 846 --------L-----NPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA----DGVIEY 908 (3956)
T ss_pred --------C-----CCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC----CCcEEE
Confidence 1 2456899999999763 2332 299999999843 347999
Q ss_pred EeeCCC---ccccccCHHHHHHHHHH
Q 008073 423 VMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 423 ~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
+||.|+ ++|+++...+|+.++.+
T Consensus 909 ~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 909 LGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred eccccCeEEECCEecCHHHHHHHHHh
Confidence 999998 89999999999998876
No 76
>PRK12316 peptide synthase; Provisional
Probab=98.61 E-value=1.2e-06 Score=120.57 Aligned_cols=130 Identities=19% Similarity=0.111 Sum_probs=79.4
Q ss_pred CCCCceeEEEecCchH---HHHHHHHHHhCCCCccccccccCceeeeeecC---CCCCCC----CcceeccCCceEEEEe
Q 008073 294 WPNVRYIKCVTTGSMS---QYCSKIKYYAGEVPVLGGDYFASECYVGINLD---IAQPPQ----TTRFVMLPTAAYFEFL 363 (578)
Q Consensus 294 WP~L~~i~~~~~G~~~---~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~---~~~~~~----~~~~~l~~~~~f~EFi 363 (578)
.|.|+ +++.|+.. ...+++.+.++++.++ +.||.||+.+..-.. ...+.. .-+. ..++. -.-.+
T Consensus 2260 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~-~~~i~ 2333 (5163)
T PRK12316 2260 PPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGR-ALGNR-RAYIL 2333 (5163)
T ss_pred Cccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCccc-ccCCC-EEEEE
Confidence 35666 45666643 2333444445678899 999999985432111 111100 0011 11221 12223
Q ss_pred eCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee---------------------ccccCCEEEEeeeeCCCCE
Q 008073 364 PFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQ 419 (578)
Q Consensus 364 p~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy---------------------RYr~GDvV~v~g~~~~~P~ 419 (578)
+.+ . ..|.+|+.+||+|... .|.| -|||||+++... .-.
T Consensus 2334 d~~--------~-----~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~----dG~ 2396 (5163)
T PRK12316 2334 DAD--------L-----NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRA----DGV 2396 (5163)
T ss_pred CCC--------C-----CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcC----CCc
Confidence 322 2 2456899999999653 2322 299999999853 347
Q ss_pred EEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 420 VEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 420 i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
++|+||.|+ |+|.++...+|+.+|.+.
T Consensus 2397 l~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2397 VEYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred EEEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 999999998 899999999999888763
No 77
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=98.60 E-value=3.1e-06 Score=95.86 Aligned_cols=138 Identities=15% Similarity=0.129 Sum_probs=78.7
Q ss_pred CCCCceeEEEecCc-hHHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCCCcceeccC----CceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGS-MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLP----TAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~-~~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~----~~~f~EFip~~~~ 368 (578)
.+++++ +.+++ .....+++.+.+|...++ +.||.||+.+.+..-...+.. ... ..+ ...+..+-+ +..
T Consensus 313 ~~~l~~---~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~-~~~ 385 (600)
T PRK08279 313 DHRLRL---MIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFINVFNFDGT-VGR-VPLWLAHPYAIVKYDV-DTG 385 (600)
T ss_pred CcceeE---EecCCCCHHHHHHHHHHhCcceee-eeecccccceeecccCCCCcc-ccc-ccccccccceeeeecc-CcC
Confidence 455553 33444 355556777778755678 999999986543211111111 111 111 222222211 111
Q ss_pred Cc-cccCCceeeccccCCCceEEEEEc--c---CCce----------e---------ccccCCEEEEeeeeCCCCEEEEE
Q 008073 369 KN-EAVGEETVDFSGVEIGKMYEVVVT--T---YRGF----------Y---------RYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 369 ~~-~~~~~~~l~~~ele~G~~YelVvT--t---~~GL----------y---------RYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
.. ...++ .+.++.+|+.+||++. . ..|. . -|+|||++++.. .-.+.|+
T Consensus 386 ~~i~~~~~---~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~~~ 458 (600)
T PRK08279 386 EPVRDADG---RCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQFV 458 (600)
T ss_pred ceeeCCCC---ccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEEEe
Confidence 00 00011 1235778999999842 2 1221 1 289999998853 2369999
Q ss_pred eeCCC---ccccccCHHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
||.++ +.|++++..+|++++.+
T Consensus 459 GR~~d~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 459 DRLGDTFRWKGENVATTEVENALSG 483 (600)
T ss_pred cccCCeEEECCcccCHHHHHHHHhc
Confidence 99998 88999999999998886
No 78
>PRK06188 acyl-CoA synthetase; Validated
Probab=98.59 E-value=6.4e-06 Score=91.46 Aligned_cols=128 Identities=16% Similarity=0.123 Sum_probs=78.6
Q ss_pred CCCCceeEEEecCc--h-HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC-----C---CCcceeccCCceEEEE
Q 008073 294 WPNVRYIKCVTTGS--M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP-----P---QTTRFVMLPTAAYFEF 362 (578)
Q Consensus 294 WP~L~~i~~~~~G~--~-~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~-----~---~~~~~~l~~~~~f~EF 362 (578)
.++++++ ..|+ + ......+.+.+| .++. +.||+||+..++....... . ...+. ..+ ..-++.
T Consensus 280 l~~lr~~---~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-p~~-g~~v~i 352 (524)
T PRK06188 280 LSSLETV---YYGASPMSPVRLAEAIERFG-PIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGR-PTP-GLRVAL 352 (524)
T ss_pred CcceeEE---EEcCCCCCHHHHHHHHHHhC-chhh-heeCccccCCceeecCchhccccccccCCcccc-ccC-CcEEEE
Confidence 4566633 4343 3 233445555565 6676 8999999843332111100 0 00111 122 233566
Q ss_pred eeCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeC
Q 008073 363 LPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRA 426 (578)
Q Consensus 363 ip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~ 426 (578)
++++. .++..|+.+||+|++. .|+| .|+|||+++... .-.+.|.||.
T Consensus 353 ~~~~~-------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~ 415 (524)
T PRK06188 353 LDEDG-------------REVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRK 415 (524)
T ss_pred EcCCC-------------CCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEecc
Confidence 65331 2456899999999874 3333 499999999853 3478899999
Q ss_pred CC---ccccccCHHHHHHHHHH
Q 008073 427 PK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 427 ~~---l~gEkv~e~~v~~av~~ 445 (578)
++ +.|+++++.+|+.++.+
T Consensus 416 ~~~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 416 KDMIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred ccceecCCEEECHHHHHHHHHh
Confidence 98 88999999999988865
No 79
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.57 E-value=3.1e-06 Score=105.12 Aligned_cols=41 Identities=22% Similarity=0.205 Sum_probs=35.5
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
-|+|||++++.. .-.+.|+||.|+ ++|+++...+|+.++.+
T Consensus 679 ~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 679 LYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred eeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 399999999853 237999999998 89999999999998876
No 80
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.57 E-value=1.1e-05 Score=88.21 Aligned_cols=60 Identities=22% Similarity=0.176 Sum_probs=48.6
Q ss_pred ccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHH
Q 008073 382 GVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 442 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~a 442 (578)
++.+|+.+||+|++. .|.+ .|+|||+++... ...+.|.||.++ +.|++++..+|+++
T Consensus 326 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~ie~~ 401 (483)
T PRK03640 326 VVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRSDLIISGGENIYPAEIEEV 401 (483)
T ss_pred cCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeecccCeEEeCCEEECHHHHHHH
Confidence 366899999999885 2222 489999999854 346899999998 88999999999998
Q ss_pred HHH
Q 008073 443 MES 445 (578)
Q Consensus 443 v~~ 445 (578)
+.+
T Consensus 402 i~~ 404 (483)
T PRK03640 402 LLS 404 (483)
T ss_pred HHh
Confidence 875
No 81
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=98.56 E-value=1.2e-06 Score=94.01 Aligned_cols=115 Identities=17% Similarity=0.260 Sum_probs=75.4
Q ss_pred cCCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCcee-eeeec--CCC-CCCCCcceeccCCceEEEEeeCC
Q 008073 293 LWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECY-VGINL--DIA-QPPQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 293 lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~--~~~-~~~~~~~~~l~~~~~f~EFip~~ 366 (578)
-+++|+.+.+ +|+ .....+++++.++.++++ ..||+||+. +++.. ... .... ......+ +.-++.++++
T Consensus 275 ~l~~lr~v~~--~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~-~~G~~~~-~~~~~ivd~~ 349 (417)
T PF00501_consen 275 DLSSLRTVIS--GGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPG-SVGKPLP-GVEVKIVDPN 349 (417)
T ss_dssp TGTT-SEEEE--ESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTT-SEBEEST-TEEEEEECTT
T ss_pred cccccccccc--ccccCChhhccccccccccccce-ecccccccceeeecccccccccccc-ccccccc-cccccccccc
Confidence 4667885533 333 366667888888766888 999999973 34422 111 0111 1222334 5678888876
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~ 428 (578)
+. + .+.+|+.+||+|+.. .|.| -|+|||++++.. .-.|.++||.++
T Consensus 350 ~~-------~-----~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~GR~~~ 412 (417)
T PF00501_consen 350 TG-------E-----PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILGRSDD 412 (417)
T ss_dssp TS-------S-----BESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEEEGSC
T ss_pred cc-------c-----cccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEEeeCC
Confidence 42 2 346899999999864 4444 399999999952 359999999998
No 82
>PRK05857 acyl-CoA synthetase; Validated
Probab=98.56 E-value=6.4e-06 Score=92.16 Aligned_cols=60 Identities=10% Similarity=0.086 Sum_probs=48.6
Q ss_pred ccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHH
Q 008073 382 GVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 442 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~a 442 (578)
.+..|+.+||+|+.. .|.| -|+|||+++... .-.+.|+||.++ +.|+|++..+|+.+
T Consensus 368 ~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~----~g~l~~~GR~~~~ik~~G~~v~p~eIE~~ 443 (540)
T PRK05857 368 AGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE----DGFFYIKGRSSEMIICGGVNIAPDEVDRI 443 (540)
T ss_pred cCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC----CceEEEeccccccEecCCEEECHHHHHHH
Confidence 456789999999875 3433 389999999733 347999999998 88999999999988
Q ss_pred HHH
Q 008073 443 MES 445 (578)
Q Consensus 443 v~~ 445 (578)
+..
T Consensus 444 l~~ 446 (540)
T PRK05857 444 AEG 446 (540)
T ss_pred HHh
Confidence 875
No 83
>PLN02736 long-chain acyl-CoA synthetase
Probab=98.55 E-value=3.6e-06 Score=96.57 Aligned_cols=127 Identities=15% Similarity=0.098 Sum_probs=75.8
Q ss_pred EEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC--CCCCCcceeccCCceEEEEeeCCCCCccccCCc
Q 008073 302 CVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 376 (578)
Q Consensus 302 ~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 376 (578)
.+.+|+. ....+.+++.+| ++++ ++||.||+...+..... ......+. ..|+ .-..+++.++. .
T Consensus 380 ~~~~gGa~l~~~~~~~~~~~~g-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg-~~v~i~d~~~~-------~ 448 (651)
T PLN02736 380 FMSSGASPLSPDVMEFLRICFG-GRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPA-CEVKLVDVPEM-------N 448 (651)
T ss_pred EEEeCCCCCCHHHHHHHHHHhC-CCeE-EEechHHhchheeccCCCCCCCCccCC-ccCc-eEEEEEEcccc-------C
Confidence 3455553 333445555565 8888 99999997543321111 11111111 2222 34556664321 0
Q ss_pred eeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c-cccccC
Q 008073 377 TVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIIS 435 (578)
Q Consensus 377 ~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l-~gEkv~ 435 (578)
. ..+.+++..+||.|... .|.| -|+|||++++.. .-.+.|+||.++ + .|++++
T Consensus 449 ~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd~ik~~~G~~V~ 522 (651)
T PLN02736 449 Y--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKNIFKLAQGEYIA 522 (651)
T ss_pred c--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechhheEcCCCcEec
Confidence 0 01234455789999653 4544 389999999853 236899999998 4 499999
Q ss_pred HHHHHHHHHH
Q 008073 436 ERDLMSAMES 445 (578)
Q Consensus 436 e~~v~~av~~ 445 (578)
+.+|+.++.+
T Consensus 523 p~eIE~~l~~ 532 (651)
T PLN02736 523 PEKIENVYAK 532 (651)
T ss_pred hHHHHHHHhc
Confidence 9999988875
No 84
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=98.55 E-value=3e-06 Score=97.34 Aligned_cols=231 Identities=13% Similarity=0.077 Sum_probs=123.9
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC--CCCcceeccCCceEEEEeeCCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP--PQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~--~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
.++|+ .+.+|+. ....+.+++.+| ++++ +.||.||+...+-.....+ +........| +.-.+.++.+
T Consensus 379 l~~Lr---~i~~~G~~l~~~~~~~~~~~~g-~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~-g~~~~i~d~~-- 450 (647)
T PTZ00237 379 LSNLK---EIWCGGEVIEESIPEYIENKLK-IKSS-RGYGQTEIGITYLYCYGHINIPYNATGVPSI-FIKPSILSED-- 450 (647)
T ss_pred cchhe---EEEecCccCCHHHHHHHHHhcC-CCEE-eeechHHhChhhhccCCCCCCCCCCCccCcC-CceEEEECCC--
Confidence 35666 3455543 333455666665 8998 9999999753221110000 0001111122 2335566543
Q ss_pred CccccCCceeeccccCCCceEEEEEccC------Ccee---------------ccccCCEEEEeeeeCCCCEEEEEeeCC
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTY------RGFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAP 427 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~------~GLy---------------RYr~GDvV~v~g~~~~~P~i~f~gR~~ 427 (578)
+ .++.+|+.+||+++.. .|+| .|+|||++++.. .-.+.|+||.+
T Consensus 451 ------g-----~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~l~i~GR~d 515 (647)
T PTZ00237 451 ------G-----KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGYYTIVSRSD 515 (647)
T ss_pred ------C-----CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCeEEEEeccC
Confidence 2 3456899999999742 4555 289999999843 35789999999
Q ss_pred C---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHH
Q 008073 428 K---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLED 503 (578)
Q Consensus 428 ~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~ 503 (578)
+ +.|++++..+|+++|.+. + + +.+-+++. +........+.||-+..+......+. +++.++|.+
T Consensus 516 d~i~~~G~rI~p~eIE~~l~~~-p------~--V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~---~~l~~~i~~ 583 (647)
T PTZ00237 516 DQIKISGNKVQLNTIETSILKH-P------L--VLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDL---NKLKNEINN 583 (647)
T ss_pred CEEEECCEEeCHHHHHHHHHhC-C------C--ceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCH---HHHHHHHHH
Confidence 8 789999999999998863 2 1 22333322 11111123345665542100001121 223333333
Q ss_pred HhChhHHHhhhcC-CCCCcEEEEeCC---CcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 008073 504 AFGSIYKVQRDRG-EISPLSVSIVKP---GTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 565 (578)
Q Consensus 504 ~Ln~~Y~~~R~~g-~l~p~~v~~v~~---G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 565 (578)
.+ ..+ .+ .-.|-+|.+|+. -.-.+.++..+.+=....++..|..+.|++.++.|++
T Consensus 584 ~~-----~~~-l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (647)
T PTZ00237 584 II-----TQD-IESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDSNYQLPDNVNDSEIFYKIKE 643 (647)
T ss_pred HH-----Hhh-cCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCCCCCCCccccCHHHHHHHHH
Confidence 22 111 22 235666766653 1111222332222122347888999999999998865
No 85
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=98.54 E-value=2.5e-06 Score=98.79 Aligned_cols=131 Identities=17% Similarity=0.164 Sum_probs=76.4
Q ss_pred CCCceeEEEecCch--HHH-HHHHHHHhCCCCccccccccCceeee--eecCCCCCCCCcceeccCCceEEEEeeCCCCC
Q 008073 295 PNVRYIKCVTTGSM--SQY-CSKIKYYAGEVPVLGGDYFASECYVG--INLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 295 P~L~~i~~~~~G~~--~~y-~~~l~~~~g~v~~~~~~y~asEg~~~--i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~ 369 (578)
++++ .+++|+. .+- ...++..+ +++++ .+||.||+..+ ++.......+..+- ..| ..-...+++++.
T Consensus 420 ~~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p-~~evkivd~~~~- 491 (696)
T PLN02387 420 GRIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGP-PLP-CCYVKLVSWEEG- 491 (696)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCC-CCC-ceEEEEeecccc-
Confidence 4455 4566654 222 23333445 48998 99999997432 22111111111111 222 234666764432
Q ss_pred ccccCCceeeccccCCCceEEEEEccC---Ccee------------------ccccCCEEEEeeeeCCCCEEEEEeeCCC
Q 008073 370 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK 428 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~ 428 (578)
+..+. -.++..+||+|... .|.| -|+|||++++.. .-.+.|+||.++
T Consensus 492 -----~~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~gR~kd 559 (696)
T PLN02387 492 -----GYLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIIDRKKD 559 (696)
T ss_pred -----CcccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEEcccc
Confidence 11111 12445689999652 4544 489999999853 347999999998
Q ss_pred ---cc-ccccCHHHHHHHHHH
Q 008073 429 ---SS-FEIISERDLMSAMES 445 (578)
Q Consensus 429 ---l~-gEkv~e~~v~~av~~ 445 (578)
+. ||++++.+|++++.+
T Consensus 560 ~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 560 IVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred eEECCCCeEEchHHHHHHHhc
Confidence 43 999999999988775
No 86
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=98.54 E-value=6.4e-06 Score=88.86 Aligned_cols=55 Identities=18% Similarity=0.208 Sum_probs=45.0
Q ss_pred ceEEEEEccC---Cceec-------------cccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 387 KMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 387 ~~YelVvTt~---~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
+.+||+|++. .|+|+ |+|||+++... ...+.|+||.++ +.|++++..+|++++.+
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 6689999874 33332 89999999864 357999999998 88999999999998875
No 87
>PRK12316 peptide synthase; Provisional
Probab=98.52 E-value=2.4e-06 Score=117.46 Aligned_cols=131 Identities=15% Similarity=0.077 Sum_probs=80.0
Q ss_pred CCCCceeEEEecCchHHH---HHHHHHHhCCCCccccccccCceeeeee---cCCCCCCCC---cceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGSMSQY---CSKIKYYAGEVPVLGGDYFASECYVGIN---LDIAQPPQT---TRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~~~~y---~~~l~~~~g~v~~~~~~y~asEg~~~i~---~~~~~~~~~---~~~~l~~~~~f~EFip 364 (578)
.|.|+ +++.||.... .+++.+.+++++++ ++||.||+.+... ......... ......++. -...++
T Consensus 4808 ~~~lr---~v~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~i~d 4882 (5163)
T PRK12316 4808 PPSLR---VYCFGGEAVAQASYDLAWRALKPVYLF-NGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNR-SGYVLD 4882 (5163)
T ss_pred CCCcc---EEEEecccCCHHHHHHHHHhCCCCEEE-ecccCccceEEEEEEEcccccccCCCCCcccccccCC-EEEEEC
Confidence 46666 4455654322 23334446779999 9999999855321 111000000 001111222 223343
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC---Ccee---------------------ccccCCEEEEeeeeCCCCEE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQV 420 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy---------------------RYr~GDvV~v~g~~~~~P~i 420 (578)
.+ . ..+.+|+.+||+|+.. .|.| -|+|||+++... .-.+
T Consensus 4883 ~~--------~-----~~~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l 4945 (5163)
T PRK12316 4883 GQ--------L-----NPLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRA----DGVI 4945 (5163)
T ss_pred CC--------C-----CcCCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECC----CCcE
Confidence 22 2 2356899999999652 2322 299999999853 3589
Q ss_pred EEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 421 EFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 421 ~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
+|+||.|+ ++|+++...+|+.++.+.
T Consensus 4946 ~~~GR~d~~iki~G~ri~~~eIE~~l~~~ 4974 (5163)
T PRK12316 4946 DYLGRVDHQVKIRGFRIELGEIEARLREH 4974 (5163)
T ss_pred EEeccccceEeeccEeecHHHHHHHHHhC
Confidence 99999998 899999999999988753
No 88
>PRK13388 acyl-CoA synthetase; Provisional
Probab=98.52 E-value=9e-06 Score=91.07 Aligned_cols=123 Identities=17% Similarity=0.113 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCc-----cccCCceeecccc
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN-----EAVGEETVDFSGV 383 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~-----~~~~~~~l~~~el 383 (578)
.....++.+.++ ++++ +.||+||+...+...+..++...+.. .++ .++++.+..+. -.+++..+ .
T Consensus 277 ~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p-~~g---~~i~~~~~~~~~~~~~~d~~g~~~----~ 346 (540)
T PRK13388 277 PRDIAEFSRRFG-CQVE-DGYGSSEGAVIVVREPGTPPGSIGRG-APG---VAIYNPETLTECAVARFDAHGALL----N 346 (540)
T ss_pred HHHHHHHHHHhC-Ccee-cccccccccceeecCCCCCCCCCCCC-CCC---cEEEcCCCCccccceeccCccccc----c
Confidence 444456666664 8899 99999998433221121112112232 233 34544332100 00111111 1
Q ss_pred CCCceEEEEEc-cC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHH
Q 008073 384 EIGKMYEVVVT-TY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAM 443 (578)
Q Consensus 384 e~G~~YelVvT-t~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av 443 (578)
..|+.+||+++ .. .|+| .|+|||+++... .-.+.|+||.++ +.|+++++.+|+.++
T Consensus 347 ~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l 422 (540)
T PRK13388 347 ADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPIERIL 422 (540)
T ss_pred CCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHHHHHH
Confidence 34678999998 32 3444 499999999853 236899999998 789999999999888
Q ss_pred HH
Q 008073 444 ES 445 (578)
Q Consensus 444 ~~ 445 (578)
.+
T Consensus 423 ~~ 424 (540)
T PRK13388 423 LR 424 (540)
T ss_pred Hh
Confidence 75
No 89
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=98.51 E-value=1.6e-05 Score=87.98 Aligned_cols=116 Identities=20% Similarity=0.112 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhCCCCccccccccCceeeeeecC-CC--CCCCCcceeccCCceEEEEeeCCCCCccccCCceeeccccCC
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLD-IA--QPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEI 385 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~-~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~ 385 (578)
...+.++.+.+| ++++ +.||+||+...+-.. +. ......+ ...+ +.-.+.++.+ + .++..
T Consensus 301 ~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~-g~~~~i~d~~--------~-----~~~~~ 363 (517)
T PRK08008 301 DQEKDAFEERFG-VRLL-TSYGMTETIVGIIGDRPGDKRRWPSIG-RPGF-CYEAEIRDDH--------N-----RPLPA 363 (517)
T ss_pred HHHHHHHHHHhC-CeEE-eeccccccccccccCCccccccCCccc-cCCC-CcEEEEECCC--------C-----CCCCC
Confidence 444556666664 8999 999999974322101 00 0000001 1112 2345555532 2 34568
Q ss_pred CceEEEEEccC------Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHH
Q 008073 386 GKMYEVVVTTY------RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 442 (578)
Q Consensus 386 G~~YelVvTt~------~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~a 442 (578)
|+.+||+++.. .|.| -|+|||++.+.. .-.+.|+||.++ +.|++++..+|+.+
T Consensus 364 g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~i~p~~iE~~ 439 (517)
T PRK08008 364 GEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMIKRGGENVSCVELENI 439 (517)
T ss_pred CCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceEEeCCEEECHHHHHHH
Confidence 99999999853 1222 289999988753 347899999998 77999999999988
Q ss_pred HHH
Q 008073 443 MES 445 (578)
Q Consensus 443 v~~ 445 (578)
+.+
T Consensus 440 l~~ 442 (517)
T PRK08008 440 IAT 442 (517)
T ss_pred HHh
Confidence 865
No 90
>PLN03052 acetate--CoA ligase; Provisional
Probab=98.51 E-value=5.5e-05 Score=88.22 Aligned_cols=41 Identities=17% Similarity=0.048 Sum_probs=35.0
Q ss_pred cccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 402 YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 402 Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
|++||++++.. .-.+.|+||.|+ +.|+++...+|+++|...
T Consensus 591 ~~tGDl~~~d~----dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~ 634 (728)
T PLN03052 591 RRHGDIFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERVCNAA 634 (728)
T ss_pred EecCceEEECC----CCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhc
Confidence 89999999853 236899999998 789999999999988643
No 91
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=98.51 E-value=1.4e-05 Score=92.79 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=35.4
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.|+|||++++.. .-.+.|+||.++ +.|+++++.+|++++.+.
T Consensus 592 w~~TGDlg~~d~----dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 592 WYDTGDIVRFDE----QGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred eEecCCEEEEcC----CCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 489999999843 336889999998 889999999999888764
No 92
>PRK05691 peptide synthase; Validated
Probab=98.51 E-value=1.4e-05 Score=109.06 Aligned_cols=131 Identities=13% Similarity=0.114 Sum_probs=82.7
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC-CCCC-C-cceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-QPPQ-T-TRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~-~~~~-~-~~~~l~~~~~f~EFip~~~ 367 (578)
.|+|+. ++.|+. ....+++.+.+++++++ +.||.||+.+....... .... . ......++ ..+..++.+
T Consensus 1387 ~~~lr~---~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~-~~~~i~d~~- 1460 (4334)
T PRK05691 1387 CTSLRR---LFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRPLGN-VLCRVLDAE- 1460 (4334)
T ss_pred CCcccE---EEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCcccceeCC-CEEEEECCC-
Confidence 467774 344543 34445666667789999 99999998553321110 0000 0 01112223 233444432
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee---------------------ccccCCEEEEeeeeCCCCEEEEE
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy---------------------RYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
. ..+.+|+.+||+|... .|.+ -|||||+++... .-.++|+
T Consensus 1461 -------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG~l~~~ 1524 (4334)
T PRK05691 1461 -------L-----NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DGALEYL 1524 (4334)
T ss_pred -------C-----CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CCCEEEe
Confidence 2 3456899999999642 1211 389999999853 3479999
Q ss_pred eeCCC---ccccccCHHHHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
||.|+ ++|.++...+|+.++.+.
T Consensus 1525 GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1525 GRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred cccCcEEEECCEEcCHHHHHHHHHhC
Confidence 99998 899999999999988763
No 93
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=98.50 E-value=1.6e-06 Score=97.85 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=87.6
Q ss_pred EEecCchHHHHHHHHHHhC-CCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeec
Q 008073 302 CVTTGSMSQYCSKIKYYAG-EVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDF 380 (578)
Q Consensus 302 ~~~~G~~~~y~~~l~~~~g-~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~ 380 (578)
-..+|+++.-.+.+..+-. |+++. .+||-||..-++.+++. ..|.+ .+ -+.+++-
T Consensus 357 ~~~sGGa~l~~~~~~f~~~lGi~i~-eGYGlTEts~~~~v~~~----------------~~~~~-gt------vG~p~p~ 412 (613)
T COG1022 357 YALSGGAPLSPELLHFFRSLGIPIL-EGYGLTETSAVVSVNPP----------------DRFVL-GT------VGKPLPG 412 (613)
T ss_pred EEEecCCcCCHHHHHHHHHcCCCeE-EEecccccccceEEccc----------------cCccc-CC------cCCcCCC
Confidence 4466665444333333221 49999 99999997554433321 11111 21 2667777
Q ss_pred cccCCCceEEEEEcc---CCceec--------------cccCCEEEEeeeeCCCCEEEEEeeCCC----ccccccCHHHH
Q 008073 381 SGVEIGKMYEVVVTT---YRGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK----SSFEIISERDL 439 (578)
Q Consensus 381 ~ele~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~----l~gEkv~e~~v 439 (578)
-|++.++++||.|-+ ..|.|. |+|||+..++. .-.+.++||.++ .+||++.+.-+
T Consensus 413 ~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l~~GknIaP~~I 488 (613)
T COG1022 413 IEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKLSNGKNIAPEPI 488 (613)
T ss_pred ceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEECCCCcccChHHH
Confidence 889999999999977 488884 99999999965 258999999998 67899999999
Q ss_pred HHHHHHHHHHhccccCceeEEEEEeec
Q 008073 440 MSAMESFQMMLRNVMAVEIVEFAGYTN 466 (578)
Q Consensus 440 ~~av~~~~~~l~~~~g~~l~~f~~~~~ 466 (578)
+..+.+- --+.+.+++.+
T Consensus 489 E~~l~~~---------~~I~qi~vvg~ 506 (613)
T COG1022 489 ESKLAKS---------PLIEQICVVGD 506 (613)
T ss_pred HHHHhcC---------CCeeEEEEEec
Confidence 8855531 13456666654
No 94
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.49 E-value=1.7e-05 Score=88.76 Aligned_cols=131 Identities=15% Similarity=0.138 Sum_probs=76.7
Q ss_pred CCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCceee-ee-ecCCCC----CC-------CCcceeccCCce
Q 008073 294 WPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYV-GI-NLDIAQ----PP-------QTTRFVMLPTAA 358 (578)
Q Consensus 294 WP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i-~~~~~~----~~-------~~~~~~l~~~~~ 358 (578)
.++|+. ++.+|. ....++.+++.++ ++++ +.||+||+.. +. +..... ++ ...+. ..| +.
T Consensus 292 ~~~l~~--~~~~G~~l~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-p~p-g~ 365 (539)
T PRK07008 292 FSTLRR--TVIGGSACPPAMIRTFEDEYG-VEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGR-VIY-GV 365 (539)
T ss_pred cccceE--EEEcCCCCCHHHHHHHHHHhC-Ccee-cccccccccccceecccccccccCCchhhhhhcccCCc-ccc-ce
Confidence 466663 334443 2455566666675 8999 9999999742 21 100000 00 00011 111 23
Q ss_pred EEEEeeCCCCCccccCCceeeccccCCCceEEEEEccC---Ccee----------ccccCCEEEEeeeeCCCCEEEEEee
Q 008073 359 YFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY----------RYRLGDIVKVVDFYNSSPQVEFVMR 425 (578)
Q Consensus 359 f~EFip~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy----------RYr~GDvV~v~g~~~~~P~i~f~gR 425 (578)
-.+.++.+ +..+. ...++.+||+++.. .|.| -|+|||+++... .-.+.|+||
T Consensus 366 ~~~i~d~~--------~~~~~---~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l~~~GR 430 (539)
T PRK07008 366 DMKIVGDD--------GRELP---WDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFMQITDR 430 (539)
T ss_pred EEEEECCC--------CCccC---CCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcEEEeec
Confidence 34455432 12121 11234689999873 2332 299999999854 236899999
Q ss_pred CCC---ccccccCHHHHHHHHHH
Q 008073 426 APK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 426 ~~~---l~gEkv~e~~v~~av~~ 445 (578)
.++ +.|+|+++.+|+.++..
T Consensus 431 ~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 431 SKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred ccCEEEeCCeEEcHHHHHHHHHh
Confidence 998 88999999999988875
No 95
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.48 E-value=2.4e-05 Score=88.22 Aligned_cols=40 Identities=25% Similarity=0.189 Sum_probs=34.6
Q ss_pred cccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 402 YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 402 Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
|+|||++++.. .-.+.|+||.++ +.|+++...+|+.++.+
T Consensus 432 ~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~ 474 (576)
T PRK05620 432 LRTGDVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMA 474 (576)
T ss_pred EecCceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhc
Confidence 89999998753 347999999987 88999999999999875
No 96
>PRK05691 peptide synthase; Validated
Probab=98.47 E-value=4.5e-06 Score=113.67 Aligned_cols=131 Identities=16% Similarity=0.168 Sum_probs=77.9
Q ss_pred CCCCceeEEEecCchHHHH---HHHHHHhCCCCccccccccCceeeeee---cCCCCCCCC--cceeccCCceEEEEeeC
Q 008073 294 WPNVRYIKCVTTGSMSQYC---SKIKYYAGEVPVLGGDYFASECYVGIN---LDIAQPPQT--TRFVMLPTAAYFEFLPF 365 (578)
Q Consensus 294 WP~L~~i~~~~~G~~~~y~---~~l~~~~g~v~~~~~~y~asEg~~~i~---~~~~~~~~~--~~~~l~~~~~f~EFip~ 365 (578)
.|+|+. ++.|+...-. +++.+.++++.++ +.||.||+.+.+. ......... ......++.. .-.++.
T Consensus 3982 ~~~lr~---~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~-~~v~d~ 4056 (4334)
T PRK05691 3982 LDGLRW---MLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNR-LYLLDE 4056 (4334)
T ss_pred CCCceE---EEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCCccCCCE-EEEECC
Confidence 356763 3444432222 3333445779999 9999999865332 111111000 0001112211 111221
Q ss_pred CCCCccccCCceeeccccCCCceEEEEEccC---Ccee---------------------ccccCCEEEEeeeeCCCCEEE
Q 008073 366 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQVE 421 (578)
Q Consensus 366 ~~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy---------------------RYr~GDvV~v~g~~~~~P~i~ 421 (578)
. . ..+..|..+||+|... .|.+ -|||||+++... .-.|+
T Consensus 4057 ~--------~-----~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l~ 4119 (4334)
T PRK05691 4057 A--------L-----ELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS----DGVLE 4119 (4334)
T ss_pred C--------C-----CCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----CCcEE
Confidence 1 1 2356899999999763 3322 299999999953 23699
Q ss_pred EEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 422 FVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 422 f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
|+||.|+ ++|.++...+|+.++.+.
T Consensus 4120 ~~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4120 YVGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred EecccCCcEEeceEEecHHHHHHHHHhC
Confidence 9999997 999999999999988753
No 97
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=98.45 E-value=7.4e-06 Score=95.54 Aligned_cols=129 Identities=14% Similarity=0.233 Sum_probs=75.2
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee--eeecCCCCCCCCcceeccCCceEEEEeeCCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~--~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~ 369 (578)
++|+ .+.+|+. ....+.++..+| ++++ .+||.||+.. .++.......+..+..+.|. .-+..++.++.
T Consensus 461 ~~lr---~~~sGGapl~~~~~~~~~~~~g-~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg-~e~ki~d~~~~- 533 (746)
T PTZ00342 461 PNLE---VILNGGGKLSPKIAEELSVLLN-VNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN-TKYKVRTWETY- 533 (746)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHhcC-CCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc-EEEEEeccccc-
Confidence 6666 4455553 333344555554 8998 9999999732 22211111111111111122 22344443321
Q ss_pred ccccCCceeeccccCCCceEEEEEcc---CCcee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-c--
Q 008073 370 NEAVGEETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-S-- 429 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G~~YelVvTt---~~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-l-- 429 (578)
. ....+..+||+|.. ..|.| -|+|||++++.. .-.+.|+||.++ |
T Consensus 534 ------~-----~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kdlIkl 598 (746)
T PTZ00342 534 ------K-----ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKGLVKL 598 (746)
T ss_pred ------c-----cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCCeEEe
Confidence 0 11233468998854 25555 299999999843 337999999999 3
Q ss_pred -cccccCHHHHHHHHHH
Q 008073 430 -SFEIISERDLMSAMES 445 (578)
Q Consensus 430 -~gEkv~e~~v~~av~~ 445 (578)
.||++++.+|++++.+
T Consensus 599 s~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 599 SQGEYIETDMLNNLYSQ 615 (746)
T ss_pred CCCEEEchHHHHHHHhc
Confidence 3899999999988875
No 98
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=98.45 E-value=2.8e-05 Score=86.89 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=77.7
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCCCCCC-cceeccCCceEEEEeeCCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQPPQT-TRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~~~~~-~~~~l~~~~~f~EFip~~~~~ 369 (578)
|+++ .+.+|+. ......++++ +++++ +.||+||+. +++.....+.... +..-.+.....++.++.+
T Consensus 302 ~~lr---~i~~gG~~~~~~~~~~~~~~--~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~--- 372 (547)
T PRK06087 302 SALR---FFLCGGTTIPKKVARECQQR--GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEA--- 372 (547)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHc--CCcEE-EEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCC---
Confidence 5665 3344443 3333444443 58999 999999963 3321111111000 001011223456666633
Q ss_pred ccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 370 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
+ .++..|+.+||++... .|.| -|+|||++++.. ...+.|+||.++ +
T Consensus 373 -----~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~ 438 (547)
T PRK06087 373 -----R-----KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRKKDIIVR 438 (547)
T ss_pred -----C-----CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecchhhhhc
Confidence 1 2456899999998553 2221 389999999853 346889999988 7
Q ss_pred cccccCHHHHHHHHHH
Q 008073 430 SFEIISERDLMSAMES 445 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~ 445 (578)
.|++++..+|++++.+
T Consensus 439 ~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 439 GGENISSREVEDILLQ 454 (547)
T ss_pred CCEEECHHHHHHHHHh
Confidence 8999999999999875
No 99
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.44 E-value=2.2e-05 Score=82.92 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=35.5
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
+|+|||++++ . .-.+.|+||.++ +.|+++++.+|+.++.+.
T Consensus 235 ~~~TGDl~~~-~----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGAL-D----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEE-e----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 7999999998 2 347899999998 789999999999988754
No 100
>PRK08308 acyl-CoA synthetase; Validated
Probab=98.42 E-value=3.6e-05 Score=83.03 Aligned_cols=56 Identities=14% Similarity=0.005 Sum_probs=46.2
Q ss_pred CCceEEEEEccCCceeccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 385 IGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 385 ~G~~YelVvTt~~GLyRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.|+.+|+++++..| +|+|||+++... .-.+.|+||.++ +.|+++++.+|+.++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 46678999998766 578999998843 237899999998 889999999999988753
No 101
>PRK06178 acyl-CoA synthetase; Validated
Probab=98.38 E-value=6e-05 Score=84.69 Aligned_cols=118 Identities=14% Similarity=0.222 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhCCCCccccccccCceee--eeecCCCCCC-------CCcceeccCCceEEEEeeCCCCCccccCCceee
Q 008073 309 SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPP-------QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVD 379 (578)
Q Consensus 309 ~~y~~~l~~~~g~v~~~~~~y~asEg~~--~i~~~~~~~~-------~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~ 379 (578)
....+.+++.+| ..++...||.||... ++.......+ ...+ ...++ .-++++++++ .
T Consensus 341 ~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG-~p~~g-~~v~v~d~~~-------~---- 406 (567)
T PRK06178 341 PDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVG-LPVPG-TEFKICDFET-------G---- 406 (567)
T ss_pred HHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccc-cccCC-cEEEEEcCCC-------C----
Confidence 455566677776 445536799999632 2211101000 0011 12333 2356676543 2
Q ss_pred ccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHH
Q 008073 380 FSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLM 440 (578)
Q Consensus 380 ~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~ 440 (578)
..+..|+.+||+|.+. .|.| .|+|||++++.+ .-.+.|+||.++ +.|++++..+|+
T Consensus 407 -~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~~eiE 481 (567)
T PRK06178 407 -ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFPSEVE 481 (567)
T ss_pred -CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECHHHHH
Confidence 2345788999999663 2322 499999999853 346999999998 889999999999
Q ss_pred HHHHH
Q 008073 441 SAMES 445 (578)
Q Consensus 441 ~av~~ 445 (578)
+++.+
T Consensus 482 ~~l~~ 486 (567)
T PRK06178 482 ALLGQ 486 (567)
T ss_pred HHHHh
Confidence 88875
No 102
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.38 E-value=1.6e-05 Score=96.93 Aligned_cols=124 Identities=20% Similarity=0.214 Sum_probs=73.6
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCC--CCCCCcceeccCCceEEEEeeCCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~ 369 (578)
++++ .+.+|+. ...++.+++.+ +++++ +.||+||+...+..... ..+...+. ..|+. -....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~-~~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGR-LLPGI-EYRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCc-cCCCC-eEEEeecC---
Confidence 4555 4566653 34445555556 48888 99999997433221111 00000111 11111 11222211
Q ss_pred ccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c
Q 008073 370 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 429 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l 429 (578)
..|+.+||.+... .|.| .|+|||+++... .-.+.|+||.++ +
T Consensus 977 --------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~ 1038 (1140)
T PRK06814 977 --------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKRFAKI 1038 (1140)
T ss_pred --------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccCeeee
Confidence 1356678877553 2222 699999999953 347999999998 8
Q ss_pred cccccCHHHHHHHHHHH
Q 008073 430 SFEIISERDLMSAMESF 446 (578)
Q Consensus 430 ~gEkv~e~~v~~av~~~ 446 (578)
.|+++++.+|++++.+.
T Consensus 1039 ~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1039 AGEMISLAAVEELAAEL 1055 (1140)
T ss_pred CCEEECHHHHHHHHHhc
Confidence 89999999999988764
No 103
>PLN03102 acyl-activating enzyme; Provisional
Probab=98.36 E-value=9.7e-06 Score=91.71 Aligned_cols=56 Identities=23% Similarity=0.279 Sum_probs=45.9
Q ss_pred CceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 386 GKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 386 G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
|+.+||+|++. .|.| +|+|||+++... .-.+.|+||.++ +.|++++..+|+.++.+
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYK 464 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHh
Confidence 46799999863 4444 699999999843 347899999998 77999999999999975
No 104
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=98.34 E-value=7.5e-05 Score=83.51 Aligned_cols=55 Identities=22% Similarity=0.248 Sum_probs=43.1
Q ss_pred ceEEEEEccC---Cceec-----------cccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 387 KMYEVVVTTY---RGFYR-----------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 387 ~~YelVvTt~---~GLyR-----------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
..+||++... .|.|. |+|||++++.. .-.+.|+||.++ +.|+|++..+|+.++.+
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 5689998642 34442 99999998743 236899999998 88999999999988875
No 105
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=98.33 E-value=1.6e-05 Score=91.63 Aligned_cols=127 Identities=11% Similarity=0.078 Sum_probs=73.4
Q ss_pred EEecCch--HHHHHHHHHHhCCCCccccccccCceeeee--ecCCCC-CCCCcceeccCCceEEEEeeCCCCCccccCCc
Q 008073 302 CVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYVGI--NLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 376 (578)
Q Consensus 302 ~~~~G~~--~~y~~~l~~~~g~v~~~~~~y~asEg~~~i--~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 376 (578)
.+.+|+. .+-..++.+.++.++++ ++||.||+..++ +..... ..+..+. ..++. =.-+++.++. +.
T Consensus 387 ~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~p~~-ev~i~d~~~~------g~ 457 (660)
T PLN02861 387 LLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGV-PMTTI-EARLESVPEM------GY 457 (660)
T ss_pred EEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccC-ccCce-EEEEEEcccc------Cc
Confidence 4455553 33333444445656777 999999974322 111100 0011112 12222 2334442211 10
Q ss_pred eeeccccCCCceEEEEEcc---CCceec-------------cccCCEEEEeeeeCCCCEEEEEeeCCC---c-cccccCH
Q 008073 377 TVDFSGVEIGKMYEVVVTT---YRGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIISE 436 (578)
Q Consensus 377 ~l~~~ele~G~~YelVvTt---~~GLyR-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l-~gEkv~e 436 (578)
..+.+|..+||.|.. ..|.|. |+|||++++.. .-.+.|+||.++ + .||++++
T Consensus 458 ----~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~G~~I~p 529 (660)
T PLN02861 458 ----DALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQGEYVAV 529 (660)
T ss_pred ----ccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCCCeEEcH
Confidence 122356678999965 356663 99999999853 247999999998 3 4999999
Q ss_pred HHHHHHHHH
Q 008073 437 RDLMSAMES 445 (578)
Q Consensus 437 ~~v~~av~~ 445 (578)
.+|++++.+
T Consensus 530 ~eIE~~l~~ 538 (660)
T PLN02861 530 ENLENTYSR 538 (660)
T ss_pred HHHHHHHhc
Confidence 999988875
No 106
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=98.30 E-value=1.7e-05 Score=90.37 Aligned_cols=44 Identities=25% Similarity=0.218 Sum_probs=30.0
Q ss_pred cccCCEEEEeeeeCCCCEEEEEeeCCC---c-cccccC--HHHHHHHHHH
Q 008073 402 YRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIIS--ERDLMSAMES 445 (578)
Q Consensus 402 Yr~GDvV~v~g~~~~~P~i~f~gR~~~---l-~gEkv~--e~~v~~av~~ 445 (578)
|+|||++++.+-....-.+.|+||.++ + .|+|++ +.+++.++.+
T Consensus 442 ~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~ 491 (614)
T PRK08180 442 YRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAG 491 (614)
T ss_pred eeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhc
Confidence 899999998531001235889999986 3 488766 7777666543
No 107
>PRK12582 acyl-CoA synthetase; Provisional
Probab=98.24 E-value=1.6e-05 Score=90.82 Aligned_cols=57 Identities=30% Similarity=0.360 Sum_probs=40.6
Q ss_pred CCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c-cccccCHHHHH
Q 008073 384 EIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIISERDLM 440 (578)
Q Consensus 384 e~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l-~gEkv~e~~v~ 440 (578)
..|+.+||+|... .|.| -|+|||++++.+.....-.+.|+||.++ + .|+|++..+++
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE 496 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLR 496 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHH
Confidence 3588899999552 4544 2999999998532111236889999987 3 48999988775
No 108
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=98.23 E-value=5.3e-05 Score=87.36 Aligned_cols=58 Identities=17% Similarity=0.221 Sum_probs=45.4
Q ss_pred CCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---c-cccccCHHHHHHHH
Q 008073 384 EIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIISERDLMSAM 443 (578)
Q Consensus 384 e~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l-~gEkv~e~~v~~av 443 (578)
..|..+||+|... .|.| .|+|||++++.. .-.+.|+||.++ + .||++++.+|+.++
T Consensus 461 ~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l 536 (660)
T PLN02430 461 GEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNLIKLSQGEYVALEYLENVY 536 (660)
T ss_pred CCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEcccccEEcCCCcEEchHHHHHHH
Confidence 3566799999763 5555 389999999843 237899999998 3 48999999999877
Q ss_pred HH
Q 008073 444 ES 445 (578)
Q Consensus 444 ~~ 445 (578)
.+
T Consensus 537 ~~ 538 (660)
T PLN02430 537 GQ 538 (660)
T ss_pred hc
Confidence 64
No 109
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=98.20 E-value=7.3e-05 Score=86.75 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=45.4
Q ss_pred CCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC----ccccccCHHHHHHH
Q 008073 384 EIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK----SSFEIISERDLMSA 442 (578)
Q Consensus 384 e~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~----l~gEkv~e~~v~~a 442 (578)
.+|..+||.|... .|.| -|+|||++++.. .-.+.|+||.++ +.|+++.+.+|+.+
T Consensus 503 ~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~ 578 (700)
T PTZ00216 503 TPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNCLGEYIALEALEAL 578 (700)
T ss_pred CCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecCCCceeccHHHHHH
Confidence 4566789999653 4444 389999999853 347999999988 46999999999988
Q ss_pred HHH
Q 008073 443 MES 445 (578)
Q Consensus 443 v~~ 445 (578)
+.+
T Consensus 579 l~~ 581 (700)
T PTZ00216 579 YGQ 581 (700)
T ss_pred Hhc
Confidence 875
No 110
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=98.10 E-value=1.5e-05 Score=85.47 Aligned_cols=60 Identities=23% Similarity=0.377 Sum_probs=48.4
Q ss_pred ccCCCceEEEEE---ccCCceec--------------cccCCEEEEeeeeCCCCEEEEEeeCCC--cc-ccccCHHHHHH
Q 008073 382 GVEIGKMYEVVV---TTYRGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK--SS-FEIISERDLMS 441 (578)
Q Consensus 382 ele~G~~YelVv---Tt~~GLyR--------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~--l~-gEkv~e~~v~~ 441 (578)
+++.|..+||.+ +|..|.|- |+|||+..... .-.++++||.++ ++ ||++.+.+|++
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 466788899998 45567773 99999998854 457999999999 55 59999999988
Q ss_pred HHHH
Q 008073 442 AMES 445 (578)
Q Consensus 442 av~~ 445 (578)
.+.+
T Consensus 502 fL~~ 505 (596)
T KOG1177|consen 502 FLNK 505 (596)
T ss_pred HHhh
Confidence 7775
No 111
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.08 E-value=0.00017 Score=79.56 Aligned_cols=126 Identities=15% Similarity=0.090 Sum_probs=77.9
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCC--CCCCcceeccCCceEEEEeeCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQ--PPQTTRFVMLPTAAYFEFLPFDME 368 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~--~~~~~~~~l~~~~~f~EFip~~~~ 368 (578)
++++ .+++|+. ....+.++++++ .+++ ..||.||+. +.....+.. .....+. ..++ . .+.++.+
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~-~~i~d~~-- 339 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWLG-PIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-D-LHICDDD-- 339 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhcC-Ccee-eeecccccCceEEecchhhccCCCCcCC-cccc-e-EEEECCC--
Confidence 4555 4455542 344456667665 7888 899999973 222111110 0000111 1222 2 4445422
Q ss_pred CccccCCceeeccccCCCceEEEEEccCCceec-------------------cccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 369 KNEAVGEETVDFSGVEIGKMYEVVVTTYRGFYR-------------------YRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 369 ~~~~~~~~~l~~~ele~G~~YelVvTt~~GLyR-------------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
++ .+.+|+.+||+|.+.+-..+ |+|||++++.. .-.+.|+||.++
T Consensus 340 ------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~ 404 (501)
T PRK13390 340 ------GN-----ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFM 404 (501)
T ss_pred ------CC-----CCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeeccccc
Confidence 22 35689999999977532222 48999999854 247899999998
Q ss_pred --ccccccCHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~ 445 (578)
+.|+++++.+|+++|.+
T Consensus 405 i~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 405 IISGGVNIYPQETENALTM 423 (501)
T ss_pred eeECCeeeCHHHHHHHHHh
Confidence 88999999999999864
No 112
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.05 E-value=0.00013 Score=83.08 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=77.1
Q ss_pred cccCCCceEEEEEccC---Ccee--------------------------------ccccCCEEEEeeeeCCCCEEEEEee
Q 008073 381 SGVEIGKMYEVVVTTY---RGFY--------------------------------RYRLGDIVKVVDFYNSSPQVEFVMR 425 (578)
Q Consensus 381 ~ele~G~~YelVvTt~---~GLy--------------------------------RYr~GDvV~v~g~~~~~P~i~f~gR 425 (578)
.++.+|+.+||+|... .|.| -|+|||+..+. .-.+.|+||
T Consensus 422 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR 496 (612)
T PRK12476 422 AELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGR 496 (612)
T ss_pred cCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEec
Confidence 3467899999999653 3433 48999999763 236999999
Q ss_pred CCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHH
Q 008073 426 APK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLE 502 (578)
Q Consensus 426 ~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld 502 (578)
.++ +.|++++..+|+++|.+..+.+ ....+.-+. .++.. ..+-+++++...+ ......+++.+.+.
T Consensus 497 ~~d~I~~~G~~I~p~eIE~~l~~~~p~V---~~~~v~v~~-~~~~~--~~~~~~~v~~~~~-----~~~~~~~~l~~~~~ 565 (612)
T PRK12476 497 IADLIVIDGRNHYPQDIEATVAEASPMV---RRGYVTAFT-VPAED--NERLVIVAERAAG-----TSRADPAPAIDAIR 565 (612)
T ss_pred cCcEEEECCcccCHHHHHHHHHHhcccc---cCCcEEEEE-ecCCC--cceEEEEEEecCC-----cccccHHHHHHHHH
Confidence 998 8899999999999998653422 111122222 12322 2355678887532 01111223334454
Q ss_pred HHhChhHHHhhhcCCCCCcEEEEeCCCcHH
Q 008073 503 DAFGSIYKVQRDRGEISPLSVSIVKPGTFD 532 (578)
Q Consensus 503 ~~Ln~~Y~~~R~~g~l~p~~v~~v~~G~f~ 532 (578)
+.|... ..+.|-.+.+|+.+.|+
T Consensus 566 ~~l~~~-------~~~~p~~v~~v~~~~lP 588 (612)
T PRK12476 566 AAVSRR-------HGLAVADVRLVPAGAIP 588 (612)
T ss_pred HHHHHh-------hCCcceEEEEECCCCcC
Confidence 545211 12445567787766555
No 113
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.03 E-value=0.00026 Score=78.04 Aligned_cols=128 Identities=12% Similarity=0.050 Sum_probs=79.5
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-ee-ecCCC-CCCCCcceeccCCceEEEEeeCCC
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GI-NLDIA-QPPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i-~~~~~-~~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
+.+++ ++..|+. ...++.+++.+| .+++ ..||+||+.. .+ +.... ..+...+..+ ..-++.++.+
T Consensus 261 ~~~lr---~i~~~g~~~~~~~~~~~~~~~~-~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~- 331 (502)
T PRK08276 261 VSSLR---VAIHAAAPCPVEVKRAMIDWWG-PIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDED- 331 (502)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHhC-cHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECCC-
Confidence 34555 5555553 445567777775 6777 8999999743 22 11100 0000011111 2234555432
Q ss_pred CCccccCCceeeccccCCCceEEEEEccCC---ce--------------eccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GF--------------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~~---GL--------------yRYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
+ ..+..|+.+||+++... |. -.|+|||++++.. .-.+.++||.++
T Consensus 332 -------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~~~i 395 (502)
T PRK08276 332 -------G-----NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRKSDMI 395 (502)
T ss_pred -------C-----CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccCcceE
Confidence 1 23567999999999432 22 2478999998853 236899999998
Q ss_pred -ccccccCHHHHHHHHHHH
Q 008073 429 -SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 -l~gEkv~e~~v~~av~~~ 446 (578)
+.|++++..+|+.++.+.
T Consensus 396 ~~~G~~v~~~~iE~~i~~~ 414 (502)
T PRK08276 396 ISGGVNIYPQEIENLLVTH 414 (502)
T ss_pred EeCCEEeCHHHHHHHHHhC
Confidence 889999999999998753
No 114
>PRK07798 acyl-CoA synthetase; Validated
Probab=97.93 E-value=0.0003 Score=77.72 Aligned_cols=127 Identities=14% Similarity=0.038 Sum_probs=77.1
Q ss_pred EEEecCch---HHHHHHHHHHhCCCCccccccccCce-eeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCc
Q 008073 301 KCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 376 (578)
Q Consensus 301 ~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg-~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 376 (578)
..+.+|+. .....++++.+++++++ +.||+||. .++......++...+.-...+. .-.+.++.+ +.
T Consensus 299 ~~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~~--------~~ 368 (533)
T PRK07798 299 FAIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIG-PRTVVLDED--------GN 368 (533)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCC-ceEEEECCC--------CC
Confidence 35555553 44556667777778999 99999996 3333221111111121112222 235555543 22
Q ss_pred eeeccccCCCce--EEEEEccC-------------------CceeccccCCEEEEeeeeCCCCEEEEEeeCCC---cccc
Q 008073 377 TVDFSGVEIGKM--YEVVVTTY-------------------RGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFE 432 (578)
Q Consensus 377 ~l~~~ele~G~~--YelVvTt~-------------------~GLyRYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gE 432 (578)
.+.+|+. ++++.+.. .|-.-|+|||++++.. .-.+.|+||.++ +.|+
T Consensus 369 -----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~~~i~~~G~ 439 (533)
T PRK07798 369 -----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGRGSVCINTGGE 439 (533)
T ss_pred -----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEccccceEecCCE
Confidence 2445665 77776542 1222478999999853 336899999998 7899
Q ss_pred ccCHHHHHHHHHHH
Q 008073 433 IISERDLMSAMESF 446 (578)
Q Consensus 433 kv~e~~v~~av~~~ 446 (578)
++++.+|++++.+.
T Consensus 440 ~v~~~eIE~~l~~~ 453 (533)
T PRK07798 440 KVFPEEVEEALKAH 453 (533)
T ss_pred EeCHHHHHHHHHhC
Confidence 99999999888753
No 115
>PRK13391 acyl-CoA synthetase; Provisional
Probab=97.90 E-value=0.00059 Score=75.59 Aligned_cols=126 Identities=13% Similarity=0.022 Sum_probs=79.5
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceee-eeecCCC---CCCCCcceeccCCceEEEEeeCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIA---QPPQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~-~i~~~~~---~~~~~~~~~l~~~~~f~EFip~~~ 367 (578)
++++ .+++|+. ....+.+++++| .+++ ..||+||+.. ....... .+...| . ..+. ..++++.+
T Consensus 275 ~~l~---~~~~gg~~~~~~~~~~~~~~~g-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG-~-~~~g--~~~i~d~~- 344 (511)
T PRK13391 275 SSLE---VAIHAAAPCPPQVKEQMIDWWG-PIIH-EYYAATEGLGFTACDSEEWLAHPGTVG-R-AMFG--DLHILDDD- 344 (511)
T ss_pred ccee---EEEEccCCCCHHHHHHHHHHcC-Ccee-eeeccccccceEEecCccccccCCCcC-C-cccc--eEEEECCC-
Confidence 3555 4455442 455567777776 7777 9999999743 2211111 111111 1 1122 35556533
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC--Ccee---------------ccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY--RGFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~--~GLy---------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
+ ..++.|+.+||++... -|.| -|+|||+++... .-.+.|+||.++
T Consensus 345 -------~-----~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~gR~~~~i 408 (511)
T PRK13391 345 -------G-----AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTDRAAFMI 408 (511)
T ss_pred -------C-----CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEeccCCCEE
Confidence 1 2346889999999774 2222 377999988743 357899999998
Q ss_pred -ccccccCHHHHHHHHHHH
Q 008073 429 -SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 -l~gEkv~e~~v~~av~~~ 446 (578)
+.|+++++.+|++++.+.
T Consensus 409 ~~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 409 ISGGVNIYPQEAENLLITH 427 (511)
T ss_pred EeCCEEECHHHHHHHHHhC
Confidence 889999999999998853
No 116
>PRK09192 acyl-CoA synthetase; Validated
Probab=97.90 E-value=0.00036 Score=78.84 Aligned_cols=60 Identities=15% Similarity=0.052 Sum_probs=48.7
Q ss_pred ccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHH
Q 008073 382 GVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 442 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~a 442 (578)
++..|+.+||+|+.. .|.| .|+|||++.+ . .-.+.|+||.++ +.|++++..+|+++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 356789999999764 3333 4899999977 2 347999999998 88999999999999
Q ss_pred HHHH
Q 008073 443 MESF 446 (578)
Q Consensus 443 v~~~ 446 (578)
|++.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 117
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.83 E-value=0.0004 Score=83.83 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=81.6
Q ss_pred CCCceeEEEecCch-HHHHHHHHHHhCCCCccccccccCceeeee-ecCCCCCCCCcceeccCCceEEEEeeCC--CCCc
Q 008073 295 PNVRYIKCVTTGSM-SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQPPQTTRFVMLPTAAYFEFLPFD--MEKN 370 (578)
Q Consensus 295 P~L~~i~~~~~G~~-~~y~~~l~~~~g~v~~~~~~y~asEg~~~i-~~~~~~~~~~~~~~l~~~~~f~EFip~~--~~~~ 370 (578)
+.|++ +.+|++ ....+++.+.+|+++++ +.||.||+.+.+ +..... +...+. ..++..-++..+.+ ..+-
T Consensus 720 ~slr~---~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~-~~svG~-p~pg~~~v~i~~~d~~~g~l 793 (994)
T PRK07868 720 HPVRL---FIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAK-IGSKGR-PLPGAGRVELAAYDPEHDLI 793 (994)
T ss_pred CceEE---EecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCC-CcccCC-ccCCCCceeEEEecCcCCce
Confidence 45553 345555 44456777778778999 999999985432 111111 111122 23332123333211 1000
Q ss_pred -cccCCceeeccccCCCceEEEEEccC----------Ccee-----ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccc
Q 008073 371 -EAVGEETVDFSGVEIGKMYEVVVTTY----------RGFY-----RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 431 (578)
Q Consensus 371 -~~~~~~~l~~~ele~G~~YelVvTt~----------~GLy-----RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~g 431 (578)
..+++ ...++++|+.+||.+... .|.+ -|+|||++++.. .-.+.|+||.++ +.|
T Consensus 794 i~d~~G---~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~----dG~l~~~GR~dd~Ik~~G 866 (994)
T PRK07868 794 LEDDRG---FVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDD----DGDYWLVDRRGSVIRTAR 866 (994)
T ss_pred eecCCc---eEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcC----CCCEEEeccCCCEEEeCC
Confidence 00111 012467899999998642 1223 388999999843 346999999998 448
Q ss_pred cccCHHHHHHHHHHH
Q 008073 432 EIISERDLMSAMESF 446 (578)
Q Consensus 432 Ekv~e~~v~~av~~~ 446 (578)
++++..+|++++.+.
T Consensus 867 ~~I~p~EIE~~L~~h 881 (994)
T PRK07868 867 GPVYTEPVTDALGRI 881 (994)
T ss_pred ceEcHHHHHHHHhcC
Confidence 999999999888863
No 118
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=97.82 E-value=0.0014 Score=70.28 Aligned_cols=106 Identities=14% Similarity=0.096 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhCC---CCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCccccCCceeeccccCC
Q 008073 309 SQYCSKIKYYAGE---VPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEI 385 (578)
Q Consensus 309 ~~y~~~l~~~~g~---v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~~~ele~ 385 (578)
..+.+.+++.+|- -.++ +.||.||...-. ..|. .+.++. |..+.. .+ +.+ +..|..
T Consensus 242 ~ef~~~l~~~~Gv~~~~~i~-~~ygmtEl~s~~---~~~~--~~~~~~-p~wV~i--RD----------p~t--l~~~~~ 300 (365)
T PF04443_consen 242 EEFYARLQEVFGVIPIENIY-DMYGMTELNSQA---YECG--HGHFHV-PPWVII--RD----------PET--LEPLPP 300 (365)
T ss_pred HHHHHHHHHHHCCCCHHHee-eeeeccccchhh---eeCC--CCcccC-CCeEEE--EC----------CCC--CcCCCC
Confidence 4566778888863 3777 899999964321 1221 133333 332221 12 333 356789
Q ss_pred CceEEEEEccC-----CceeccccCCEEEEeeeeCCC-----CEEEEEeeCCC--ccccccCHHH
Q 008073 386 GKMYEVVVTTY-----RGFYRYRLGDIVKVVDFYNSS-----PQVEFVMRAPK--SSFEIISERD 438 (578)
Q Consensus 386 G~~YelVvTt~-----~GLyRYr~GDvV~v~g~~~~~-----P~i~f~gR~~~--l~gEkv~e~~ 438 (578)
|+.+-|.+-+. .|. =-|.|+..+.+ .+.| +.|+++||.+. ++|-.++-++
T Consensus 301 Ge~Gli~vidl~~~s~p~~--IlTeDlGvl~~-~~~c~cr~g~~f~vlGR~~~ae~RGCs~~~~e 362 (365)
T PF04443_consen 301 GETGLIQVIDLANTSYPGF--ILTEDLGVLHG-DDDCGCRKGKYFEVLGRADGAEIRGCSLTFAE 362 (365)
T ss_pred CCeeEEEEEcccccCCCcE--EEEcceeeecC-CCCCCCccCCEEEEEeCCCCCccCCcHHHHHH
Confidence 99999988554 344 34999996655 3233 48999999997 8885554433
No 119
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=97.76 E-value=0.0012 Score=71.28 Aligned_cols=42 Identities=14% Similarity=0.040 Sum_probs=35.6
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.|++||+++... .-.+.|+||.++ +.|+|+++.+|++++.+.
T Consensus 276 ~~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 378999988743 458999999998 889999999999988863
No 120
>PLN02614 long-chain acyl-CoA synthetase
Probab=97.75 E-value=0.00011 Score=84.92 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=79.0
Q ss_pred CCCceeEEEecCch--HHHHHHHHHHhCCCCccccccccCceee-e-eecCCCC-CCCCcceeccCCceEEEEeeCCCCC
Q 008073 295 PNVRYIKCVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYV-G-INLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 295 P~L~~i~~~~~G~~--~~y~~~l~~~~g~v~~~~~~y~asEg~~-~-i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~ 369 (578)
++|++ +.+|+. .....++.+.+++++++ ++||.||+.. . ++..... ..+..+. ..|+. =+-.+++++.
T Consensus 386 ~~lr~---~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~-evki~d~~~~- 458 (666)
T PLN02614 386 GNVRI---ILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNV-DIRLESVPEM- 458 (666)
T ss_pred CcEEE---EEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCce-EEEEeeeccc-
Confidence 45553 345543 33344455556678999 9999999743 2 2111000 0111112 22332 2334543221
Q ss_pred ccccCCceeeccccCCCceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---cc
Q 008073 370 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 430 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~ 430 (578)
+. .++.+|+.+||+|... .|.| -|+|||++++.. .-.+.|+||.++ +.
T Consensus 459 ----~~-----~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ik~~ 525 (666)
T PLN02614 459 ----EY-----DALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNIFKLS 525 (666)
T ss_pred ----Cc-----ccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhceecC
Confidence 01 2356799999999653 4655 389999999853 236999999998 33
Q ss_pred -ccccCHHHHHHHHHH
Q 008073 431 -FEIISERDLMSAMES 445 (578)
Q Consensus 431 -gEkv~e~~v~~av~~ 445 (578)
||+|++.+|++++.+
T Consensus 526 ~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 526 QGEYVAVENIENIYGE 541 (666)
T ss_pred CCeeecHHHHHHHHhc
Confidence 899999999988875
No 121
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=97.72 E-value=0.0012 Score=74.85 Aligned_cols=132 Identities=17% Similarity=0.173 Sum_probs=83.0
Q ss_pred ccCCCCceeEEEecCchHHHHHHHH--HHhCCCCccccccccCceeeeeecC-CCCC-CCCcceeccCCceEEEEeeCCC
Q 008073 292 KLWPNVRYIKCVTTGSMSQYCSKIK--YYAGEVPVLGGDYFASECYVGINLD-IAQP-PQTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 292 ~lWP~L~~i~~~~~G~~~~y~~~l~--~~~g~v~~~~~~y~asEg~~~i~~~-~~~~-~~~~~~~l~~~~~f~EFip~~~ 367 (578)
.||+|.+ .+++|+++.-..-++ ....|++++ ++||-||+.-|.... +.+. .+..+-.+ | .+-+=++++++
T Consensus 416 ~LGg~vr---~~~sGaAPls~ev~~F~r~~~g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~p~-p-~~~vKL~dvpe 489 (691)
T KOG1256|consen 416 SLGGNVR---LIISGAAPLSPEVLTFFRAALGCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGPPV-P-GNEVKLVDVPE 489 (691)
T ss_pred HhcCcee---EEEecCCCCCHHHHHHHHHhcCceee-ecccccccCCceEeccCCCCCCCCcCCcc-c-CceEEEechHH
Confidence 5778876 558887533322222 223459999 999999986332211 1111 11122212 2 22344455543
Q ss_pred CCccccCCceeeccccCCCceEEEEE---ccCCcee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVV---TTYRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVv---Tt~~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
. .--..|..+||.| +-..|.| -.+|||+.++.. .-.+.+.+|.++
T Consensus 490 ~------------ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidRkK~if 553 (691)
T KOG1256|consen 490 M------------NYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDRKKNIF 553 (691)
T ss_pred h------------CcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEecccceE
Confidence 2 1123566899999 3358877 389999999954 448999999998
Q ss_pred --ccccccCHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~ 445 (578)
-.||.|.+..++++..+
T Consensus 554 klaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 554 KLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred EcCCCCccChHHHHHHHhc
Confidence 34799999999988876
No 122
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=97.71 E-value=0.0031 Score=71.36 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=129.4
Q ss_pred CCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCce-eeeeecCCCC-CCCCcceeccCCceEEEEeeCCCCC
Q 008073 295 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEK 369 (578)
Q Consensus 295 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg-~~~i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~ 369 (578)
+.|+ ++.|.+. ..-.+.+.+.++.-|+. +.|+.||. ..-+...+.. +...++.-...-+..++.++++
T Consensus 359 ~sLk---~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~--- 431 (626)
T KOG1175|consen 359 KSLR---TCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDEN--- 431 (626)
T ss_pred ceEE---EEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCC---
Confidence 4455 4455442 22334455666533677 99999996 2222222222 2222333222223456666653
Q ss_pred ccccCCceeeccccCCC-ceEEEEEccC--Cc----eec----------------cccCCEEEEeeeeCCCCEEEEEeeC
Q 008073 370 NEAVGEETVDFSGVEIG-KMYEVVVTTY--RG----FYR----------------YRLGDIVKVVDFYNSSPQVEFVMRA 426 (578)
Q Consensus 370 ~~~~~~~~l~~~ele~G-~~YelVvTt~--~G----LyR----------------Yr~GDvV~v~g~~~~~P~i~f~gR~ 426 (578)
+ .+++.+ +.+||+++.. .| +|. |.+||-.+.+ ..--|.+.||.
T Consensus 432 -----g-----~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd----~dGY~~i~GR~ 497 (626)
T KOG1175|consen 432 -----G-----NELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRD----EDGYYWILGRV 497 (626)
T ss_pred -----C-----CCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEc----CCceEEEEecc
Confidence 2 234444 7899999764 12 332 8999999985 25579999999
Q ss_pred CC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCc-eEEEEEEeecCccccCCCHHHHHHHHHHHH
Q 008073 427 PK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPK-KLMIFVEIREGCTKLRDSVAILRRCCSSLE 502 (578)
Q Consensus 427 ~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~-~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld 502 (578)
|| +.|-+++-.+|++|+.+. + .+.|-+|+.-.....+ .-..||=+.++ ..+.++ +.++|.
T Consensus 498 DDviNvsGhRigtaEIE~al~~h-p--------~VaEsAvVg~p~~~~ge~v~aFvvl~~g----~~~~~~---L~kel~ 561 (626)
T KOG1175|consen 498 DDVINVSGHRIGTAEIESALVEH-P--------AVAESAVVGSPDPIKGEVVLAFVVLKSG----SHDPEQ---LTKELV 561 (626)
T ss_pred cccccccceeecHHHHHHHHhhC-c--------chhheeeecCCCCCCCeEEEEEEEEcCC----CCChHH---HHHHHH
Confidence 99 889999999999999653 1 2234333321111122 22356656543 122232 233444
Q ss_pred HHhChhHHHhhhcCCC-CCcEEEEe---CCCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhcc
Q 008073 503 DAFGSIYKVQRDRGEI-SPLSVSIV---KPGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGC 566 (578)
Q Consensus 503 ~~Ln~~Y~~~R~~g~l-~p~~v~~v---~~G~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~ 566 (578)
..+ +...|-+ .|-.|..| |.=...+.+++.+.+-.+.-|++-.-.+.|+++++.+.+.
T Consensus 562 ~~V------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~dp~v~~~~~~~ 623 (626)
T KOG1175|consen 562 KHV------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLADPSVIDHLRSI 623 (626)
T ss_pred HHH------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence 434 1123333 44455554 2334566777777664444489989999999999988764
No 123
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=97.59 E-value=0.00077 Score=74.04 Aligned_cols=58 Identities=10% Similarity=0.170 Sum_probs=45.7
Q ss_pred CCceEEEEEccC---Ccee--------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 385 IGKMYEVVVTTY---RGFY--------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 385 ~G~~YelVvTt~---~GLy--------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.|+.+||+|... .|.| -|+|||++++.. .-.+.|+||.++ +.|+|+++.+|+.++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 488999999542 3433 189999998732 346889999998 889999999999988863
No 124
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=97.49 E-value=0.0031 Score=70.80 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=87.6
Q ss_pred cCCCCceeEEEecCc--hHHHHHHHHHHhCCCCccccccccCce--eeeeecCCC--CCCCCcceeccCCceEEEEeeCC
Q 008073 293 LWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASEC--YVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 293 lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~~~~~~y~asEg--~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~ 366 (578)
=.|+++.+. ++|+ ......++++.+|...+. .+||-||. .+.++.+.. .+.+ .+.++ + ..-=.|..+
T Consensus 297 ~l~sl~~v~--~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~s-vG~~~-~--g~~~~v~~e 369 (537)
T KOG1176|consen 297 DLSSLRSVL--SGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGS-VGRLL-P--GVRVKVLDE 369 (537)
T ss_pred cCCccEEEE--ecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccc-cCccc-c--ceEEEeeCC
Confidence 346665332 3333 356667888888867777 99999996 457777765 2333 33322 2 222233333
Q ss_pred CCCccccCCceeeccccCCCceEEEEEcc---CCcee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt---~~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
+ + .++.+++.+||++=. ..|.| -|+|||+.-+. .--.+.+++|.++
T Consensus 370 ~-------g-----~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D----~DG~l~IvdR~Kdl 433 (537)
T KOG1176|consen 370 T-------G-----VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFD----EDGYLYIVDRSKDL 433 (537)
T ss_pred C-------C-----CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEc----CCCeEEEecchhhh
Confidence 3 2 234588899999944 36655 28999996653 3558999999998
Q ss_pred --ccccccCHHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMESF 446 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~~ 446 (578)
..|+++++.||+++|.+-
T Consensus 434 Ik~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 434 IKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred eeeCCEEeCHHHHHHHHHhC
Confidence 779999999998888853
No 125
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=97.39 E-value=0.0036 Score=68.93 Aligned_cols=222 Identities=15% Similarity=0.144 Sum_probs=124.5
Q ss_pred cCchHHHHHHHHHHhCCCCccccccccCceeee-eecCCCCCCCCccee-ccCCceEEEEeeCCCC--Cc-cccCCceee
Q 008073 305 TGSMSQYCSKIKYYAGEVPVLGGDYFASECYVG-INLDIAQPPQTTRFV-MLPTAAYFEFLPFDME--KN-EAVGEETVD 379 (578)
Q Consensus 305 ~G~~~~y~~~l~~~~g~v~~~~~~y~asEg~~~-i~~~~~~~~~~~~~~-l~~~~~f~EFip~~~~--~~-~~~~~~~l~ 379 (578)
.|-=+...+.+.+.|| ++-+++.||||||-++ +|++...-+ .|-+- +.....=|+.|..+.. |. -.+++-.+
T Consensus 365 NGLR~diW~~Fv~RFg-~~~IgE~YgaTEgn~~~~N~d~~vGA-~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci- 441 (649)
T KOG1179|consen 365 NGLRPDIWQQFVKRFG-IIKIGEFYGATEGNSNLVNYDGRVGA-CGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCI- 441 (649)
T ss_pred CCCCchHHHHHHHHcC-CCeEEEEeccccCcceeeeecCcccc-ccchhhhhhhccceEEEEecCCCCceeecCCceEE-
Confidence 3333444455667787 5545599999999664 466544211 11111 1111223677765532 11 12233333
Q ss_pred ccccCCCceEEEEEcc--------CCc-----------ee---------ccccCCEEEEeeeeCCCCEEEEEeeCCC---
Q 008073 380 FSGVEIGKMYEVVVTT--------YRG-----------FY---------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 428 (578)
Q Consensus 380 ~~ele~G~~YelVvTt--------~~G-----------Ly---------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 428 (578)
.+++||.+.||=.- +-| ++ -|++||++.... ---+-|..|.+|
T Consensus 442 --~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DRtGDTFR 515 (649)
T KOG1179|consen 442 --PCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDRTGDTFR 515 (649)
T ss_pred --ECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEeccCCCcee
Confidence 36788888666321 222 23 389999987754 346889999999
Q ss_pred ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEe-ecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhCh
Q 008073 429 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGY-TNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGS 507 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~-~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~ 507 (578)
=+||+|+-.+|++.+..... +. ++.-|=|. ++.++..+-=.+. +..+ ..-+++.+...+...| |
T Consensus 516 WKGENVsTtEVe~~l~~~~~-~~-----dv~VYGV~VP~~EGRaGMAaI~--~~p~------~~~d~~~l~~~l~~~L-P 580 (649)
T KOG1179|consen 516 WKGENVSTTEVEDVLSALDF-LQ-----DVNVYGVTVPGYEGRAGMAAIV--LDPT------TEKDLEKLYQHLRENL-P 580 (649)
T ss_pred ecCCcccHHHHHHHHhhhcc-cc-----ceeEEEEecCCccCccceEEEE--ecCc------ccchHHHHHHHHHhhC-c
Confidence 78999999999887776432 21 22234332 3334444422233 2211 2233445556666666 5
Q ss_pred hHHHhhhcCCCCCcEEEEeCCCcHHHHHHHHHHcCCCCCCCCCCccc
Q 008073 508 IYKVQRDRGEISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIV 554 (578)
Q Consensus 508 ~Y~~~R~~g~l~p~~v~~v~~G~f~~~~~~~~~~G~~~~Q~K~Pr~~ 554 (578)
.|+.=|......-. =.-|||.--....+..|-..++++-|--+
T Consensus 581 ~YA~P~FlRl~~~i----~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 581 SYARPRFLRLQDEI----EKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred cccchHHHHHHhhh----hcccchhhHHHHHHHccCCccccCCceEE
Confidence 56665544433322 23589996666665668888888888654
No 126
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=97.19 E-value=0.067 Score=59.12 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=82.7
Q ss_pred EEecCch--HHHHHHHHHHhCCCCccccccccCcee-eeeecCCCCCC-CCcceeccCCceEEEEeeCCCCCccccCCce
Q 008073 302 CVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQPP-QTTRFVMLPTAAYFEFLPFDMEKNEAVGEET 377 (578)
Q Consensus 302 ~~~~G~~--~~y~~~l~~~~g~v~~~~~~y~asEg~-~~i~~~~~~~~-~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~ 377 (578)
-+.+|++ ++-.+++-.-+=.+|+. -+||-||.. -|.-.++++-. +..+- + ...+.+-.++.++.. ..+.
T Consensus 406 ~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~~g~vG~-p-l~c~eiKLvdw~EgG---Y~~~- 478 (678)
T KOG1180|consen 406 YILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFSTGRVGA-P-LPCCEIKLVDWEEGG---YFAK- 478 (678)
T ss_pred EEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcccccccC-C-ccceEEEEEEhhhcC---ccCC-
Confidence 4477775 34444433333226888 999999953 33333333221 11111 1 124567777776531 0000
Q ss_pred eeccccCCCceEEEEEccC---Ccee-----------------ccccCCEEEEeeeeCCCCEEEEEeeCCC----ccccc
Q 008073 378 VDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK----SSFEI 433 (578)
Q Consensus 378 l~~~ele~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~----l~gEk 433 (578)
. .| =++||+|+-. .|.| -|+||||.+++- --++++..|.++ .+||-
T Consensus 479 ----~-~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~p----dG~LkIIDRKKdLVKlq~GEY 548 (678)
T KOG1180|consen 479 ----N-KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHP----DGCLKIIDRKKDLVKLQNGEY 548 (678)
T ss_pred ----C-CC-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecC----CCcEEEeechhhhhhhcccce
Confidence 0 01 1577777542 3433 489999999932 339999999998 78999
Q ss_pred cCHHHHHHHHHHHHHHhccccCceeEEEEEeecCC
Q 008073 434 ISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLE 468 (578)
Q Consensus 434 v~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~ 468 (578)
++=.-|+.++..- . -+.+.|+++|..
T Consensus 549 IsL~KvEa~l~s~-p--------~V~NICvyAd~~ 574 (678)
T KOG1180|consen 549 ISLGKVEAALRSS-P--------YVDNICVYADSN 574 (678)
T ss_pred eehHHHHHHHhcC-c--------chhheEEecccc
Confidence 9999997777642 2 234678888853
No 127
>PRK08162 acyl-CoA synthetase; Validated
Probab=97.17 E-value=0.017 Score=64.54 Aligned_cols=56 Identities=16% Similarity=0.250 Sum_probs=44.9
Q ss_pred ceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 387 KMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 387 ~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
+.+||+|+.. .|.| .|+|||++++.. .-.+.|+||.++ +.|++++..+|+.++.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 3599999873 3443 389999998854 347999999998 889999999999988753
No 128
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=97.00 E-value=0.012 Score=64.24 Aligned_cols=41 Identities=12% Similarity=0.082 Sum_probs=35.2
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 446 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~~ 446 (578)
.|+|||++++. .-.+.|+||.++ +.|+|+++.+|++++.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 58999999985 236899999998 789999999999988763
No 129
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.78 E-value=0.0013 Score=56.70 Aligned_cols=84 Identities=23% Similarity=0.362 Sum_probs=53.2
Q ss_pred ccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHH
Q 008073 431 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYK 510 (578)
Q Consensus 431 gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~ 510 (578)
|.++++.+|+++|.+. . ++. .+|.+.....+...+..+.||...+ ...+....++++++|.++|
T Consensus 1 GvnvfP~~Ie~vl~~~-~------~~~-~~y~i~v~~~~~~D~l~v~vE~~~~---~~~~~~~~~~l~~~i~~~l----- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P------EVS-PEYQIVVTREGGLDELTVRVELRPG---FSDDAEDLEALAERIAERL----- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T------TEE-EEEEEEEEEETTEEEEEEEEEESTT---CCTTHHHHHHHHHHHHHHH-----
T ss_pred CcEECHHHHHHHHHhC-c------CCC-CcEEEEEEcCCCCcEEEEEEEECCc---cCcchHHHHHHHHHHHHHH-----
Confidence 6789999999998875 2 221 2888776543345567788998754 1122355667778888888
Q ss_pred HhhhcCCCCCcEEEEeCCCcHHH
Q 008073 511 VQRDRGEISPLSVSIVKPGTFDR 533 (578)
Q Consensus 511 ~~R~~g~l~p~~v~~v~~G~f~~ 533 (578)
|..-.+.| +|.+|++|++++
T Consensus 65 --k~~lgv~~-~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 --KERLGVRP-EVELVPPGTLPR 84 (96)
T ss_dssp --HHHHSS-E-EEEEE-TT-S--
T ss_pred --HhhcCceE-EEEEECCCCccC
Confidence 43334554 999999999997
No 130
>PLN02479 acetate-CoA ligase
Probab=96.72 E-value=0.0066 Score=68.45 Aligned_cols=55 Identities=22% Similarity=0.260 Sum_probs=44.3
Q ss_pred ceEEEEEccC---Ccee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHHHH
Q 008073 387 KMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 387 ~~YelVvTt~---~GLy-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
+.+||+++.. .|.| .|+|||++++.. .-.+.|+||.++ +.|++++..+|+.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 5799999863 2333 499999998843 347999999998 88999999999998875
No 131
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=87.90 E-value=2.7 Score=48.02 Aligned_cols=59 Identities=19% Similarity=0.270 Sum_probs=43.7
Q ss_pred ccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHH
Q 008073 382 GVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMS 441 (578)
Q Consensus 382 ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~ 441 (578)
.+..|..+|+.|+.. -|++ -|+|||+++- ...-.++|+||.+. ++|..+-..+++.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~----~~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARP----LADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeE----CCCCeEEEeccccceeEeceEecCcHHHHH
Confidence 355788899999874 2311 3999999993 13448999999776 8899997777766
Q ss_pred HHH
Q 008073 442 AME 444 (578)
Q Consensus 442 av~ 444 (578)
++.
T Consensus 637 ~l~ 639 (642)
T COG1020 637 ALA 639 (642)
T ss_pred HHh
Confidence 654
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=83.25 E-value=10 Score=40.86 Aligned_cols=40 Identities=10% Similarity=-0.057 Sum_probs=31.7
Q ss_pred ccccCCEEEEeeeeCCCCEEEEEeeCCCccc---cccCHHHHHHHHHHH
Q 008073 401 RYRLGDIVKVVDFYNSSPQVEFVMRAPKSSF---EIISERDLMSAMESF 446 (578)
Q Consensus 401 RYr~GDvV~v~g~~~~~P~i~f~gR~~~l~g---Ekv~e~~v~~av~~~ 446 (578)
-|+|||++++.+ ..-.+.|+||.+ .| |++++. |++++.+.
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~--~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG--TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc--CCcCceeeCHH-HHHHHHhC
Confidence 489999998742 244699999999 56 899999 98877763
No 133
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=68.47 E-value=6.4 Score=43.17 Aligned_cols=27 Identities=11% Similarity=0.004 Sum_probs=21.2
Q ss_pred CCCeeEEEecccCCCCcceeeecchhHH
Q 008073 89 VDPLVCFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 89 ~~pi~~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
++.......||||| |.||-+..|.+.+
T Consensus 119 ~~~~~~i~~TSGTT-G~PKgV~~t~~~l 145 (452)
T PRK07445 119 LETGWIMIPTGGSS-GQIRFAIHTWETL 145 (452)
T ss_pred CCCcEEEEeCCCCC-CCCcEEEechHHH
Confidence 34455556799999 9999999998765
No 134
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=63.69 E-value=7.3 Score=42.36 Aligned_cols=27 Identities=22% Similarity=0.149 Sum_probs=22.2
Q ss_pred CCCeeEEEecccCCCCcceeeecchhHH
Q 008073 89 VDPLVCFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 89 ~~pi~~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
++.+.+...||||| |+||-+..|.+.+
T Consensus 134 ~~~~a~i~~TSGTT-G~PKgv~~s~~~~ 160 (458)
T PRK09029 134 PQRLATMTLTSGST-GLPKAAVHTAQAH 160 (458)
T ss_pred CCCeEEEEECCCCC-CCCCEEEEeHHHH
Confidence 44556778999999 9999999998765
No 135
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=59.50 E-value=16 Score=33.91 Aligned_cols=43 Identities=26% Similarity=0.305 Sum_probs=33.9
Q ss_pred cCCCceEEEEEccC--Cceecc----ccCCEEEEeeeeCCCCEEEEEeeCC
Q 008073 383 VEIGKMYEVVVTTY--RGFYRY----RLGDIVKVVDFYNSSPQVEFVMRAP 427 (578)
Q Consensus 383 le~G~~YelVvTt~--~GLyRY----r~GDvV~v~g~~~~~P~i~f~gR~~ 427 (578)
|.+|+.-+|.||.. +|-+++ ..+|+=.|.+- ..|+|+|.+...
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkdi--~pPRI~l~Y~L~ 95 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKDI--YPPRIELSYTLT 95 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEccC--CCCcEEEEEEEE
Confidence 78999999999995 997765 55676555555 579999999865
No 136
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=55.10 E-value=15 Score=41.75 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=22.4
Q ss_pred CCCeeEEEecccCCCCcceeeecchhHH
Q 008073 89 VDPLVCFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 89 ~~pi~~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
++.+.+...||||| |+||-+..|.+.+
T Consensus 192 ~~d~a~i~yTSGTT-G~PKgV~~sh~~l 218 (612)
T PRK12476 192 TDDVSHLQYTSGST-RPPVGVEITHRAV 218 (612)
T ss_pred CCceEEEEeCCCCC-CCCceEEeeHHHH
Confidence 34566778899999 9999999998765
No 137
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=53.00 E-value=34 Score=27.56 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=37.3
Q ss_pred cccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEe
Q 008073 432 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEI 480 (578)
Q Consensus 432 Ekv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~ 480 (578)
++..|+.++.||.+|.+.+.++.++.+.+..+..+. +.-.||.+-+..
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv 60 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKV 60 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEE
Confidence 567799999999999998865567778888776655 346789876664
No 138
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=52.26 E-value=9.6 Score=43.97 Aligned_cols=26 Identities=19% Similarity=0.281 Sum_probs=21.0
Q ss_pred CCCeeEEEecccCCCCcceeeecchhH
Q 008073 89 VDPLVCFFYSSGTSSMKPKLIPYFDSA 115 (578)
Q Consensus 89 ~~pi~~F~~TSGTT~G~~K~IP~T~~~ 115 (578)
++.+.+...||||| |+||-|..|...
T Consensus 253 ~~d~~~IlyTSGTT-G~PKgV~~sh~~ 278 (647)
T PTZ00237 253 SSHPLYILYTSGTT-GNSKAVVRSNGP 278 (647)
T ss_pred CCCcEEEEEcCCCC-CCCCeEEEcCcH
Confidence 34455678899999 999999999875
No 139
>PLN02614 long-chain acyl-CoA synthetase
Probab=52.09 E-value=11 Score=43.80 Aligned_cols=29 Identities=21% Similarity=0.353 Sum_probs=23.3
Q ss_pred cCCCeeEEEecccCCCCcceeeecchhHHH
Q 008073 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALS 117 (578)
Q Consensus 88 ~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~ 117 (578)
.++-+.+...||||| |.||=+..|...+-
T Consensus 221 ~~~d~a~I~yTSGTT-G~PKGV~lth~nl~ 249 (666)
T PLN02614 221 KKSDICTIMYTSGTT-GDPKGVMISNESIV 249 (666)
T ss_pred CCCceEEEEEcCCCC-CCCcEEEEecHHHH
Confidence 345566778899999 99999999987653
No 140
>PRK09192 acyl-CoA synthetase; Validated
Probab=48.81 E-value=18 Score=40.89 Aligned_cols=29 Identities=28% Similarity=0.347 Sum_probs=22.6
Q ss_pred cCCCeeEEEecccCCCCcceeeecchhHHH
Q 008073 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALS 117 (578)
Q Consensus 88 ~~~pi~~F~~TSGTT~G~~K~IP~T~~~l~ 117 (578)
.++.+.+...||||| |.||-+..|.+.+-
T Consensus 174 ~~~~~a~i~~TSGTT-G~PKgv~~sh~~~~ 202 (579)
T PRK09192 174 TPDDIAYLQYSSGST-RFPRGVIITHRALM 202 (579)
T ss_pred CCCCeEEEEecCCCC-CCCceEEeeHHHHH
Confidence 334456667899999 99999999987653
No 141
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=45.15 E-value=1.2e+02 Score=26.46 Aligned_cols=43 Identities=16% Similarity=0.242 Sum_probs=32.2
Q ss_pred ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEeec
Q 008073 429 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIRE 482 (578)
Q Consensus 429 l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~ 482 (578)
+-.+. ..+.+.+.+...+. + .++.+..|++.+| |+.++++..+
T Consensus 18 ~~~~~-~~~~l~~~l~~~~~--~--~~~~i~~~~vm~n------HvHllv~~~~ 60 (121)
T PF01797_consen 18 LFNDE-IREALLEILREICE--E--YGIEIIAFVVMPN------HVHLLVSIPP 60 (121)
T ss_dssp SSSHH-HHHHHHHHHHHHHH--H--TTEEEEEEEEETT------EEEEEEEE-T
T ss_pred eeehh-eeeeeeeccccccc--c--ccceeeeecccCc------ccceeeeecc
Confidence 44444 66777788888877 4 6899999998755 9999998864
No 142
>PLN02479 acetate-CoA ligase
Probab=41.42 E-value=18 Score=40.69 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=18.9
Q ss_pred EEEecccCCCCcceeeecchhHH
Q 008073 94 CFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 94 ~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
++..||||| |.||-+.+|.+.+
T Consensus 199 ~i~yTSGTT-G~PKgV~~sh~~~ 220 (567)
T PLN02479 199 ALGYTSGTT-ASPKGVVLHHRGA 220 (567)
T ss_pred EEEECCCCC-CCCcEEEeccHHH
Confidence 478999999 9999999997653
No 143
>PRK07798 acyl-CoA synthetase; Validated
Probab=40.92 E-value=17 Score=39.89 Aligned_cols=22 Identities=23% Similarity=0.463 Sum_probs=18.9
Q ss_pred EEEecccCCCCcceeeecchhHH
Q 008073 94 CFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 94 ~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
+...||||| |.||-+.+|...+
T Consensus 167 ~i~~TSGTT-G~PK~v~~s~~~~ 188 (533)
T PRK07798 167 YLLYTGGTT-GMPKGVMWRQEDI 188 (533)
T ss_pred EEEECCCCC-CCCcEEEEecHHH
Confidence 456799999 9999999998765
No 144
>PRK08162 acyl-CoA synthetase; Validated
Probab=38.78 E-value=23 Score=39.35 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=19.6
Q ss_pred eeEEEecccCCCCcceeeecchhHH
Q 008073 92 LVCFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 92 i~~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
+.....||||| |.||-+.+|.+.+
T Consensus 184 ~~~i~~TSGTT-G~PKgv~~t~~~~ 207 (545)
T PRK08162 184 AIALNYTSGTT-GNPKGVVYHHRGA 207 (545)
T ss_pred eEEEEeCCCCC-CCCcEEEEecHHH
Confidence 34567899999 9999999997643
No 145
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=33.92 E-value=32 Score=39.01 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=21.1
Q ss_pred CCeeEEEecccCCCCcceeeecchhHH
Q 008073 90 DPLVCFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 90 ~pi~~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
+-+.....||||| |.||-++.|.+.+
T Consensus 184 dd~~~il~SSGTT-g~PKgV~lsHr~~ 209 (537)
T KOG1176|consen 184 DDTAAILYSSGTT-GLPKGVVLSHRNL 209 (537)
T ss_pred CCeEEEecCCCCC-CCCceEEEecHHH
Confidence 4445668999999 9999999998853
No 146
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=32.94 E-value=28 Score=39.32 Aligned_cols=31 Identities=23% Similarity=0.431 Sum_probs=20.8
Q ss_pred CCCceE----EEEEccCCcee--ccccCCEEEEeeee
Q 008073 384 EIGKMY----EVVVTTYRGFY--RYRLGDIVKVVDFY 414 (578)
Q Consensus 384 e~G~~Y----elVvTt~~GLy--RYr~GDvV~v~g~~ 414 (578)
+.|..| -|++-..-|++ +=||||.+|=.|..
T Consensus 484 kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 484 KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGEN 520 (649)
T ss_pred ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCc
Confidence 456544 35555556633 67999999988864
No 147
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.39 E-value=43 Score=36.72 Aligned_cols=24 Identities=38% Similarity=0.324 Sum_probs=18.6
Q ss_pred eeEEEecccCCCCcceeeecchhHH
Q 008073 92 LVCFFYSSGTSSMKPKLIPYFDSAL 116 (578)
Q Consensus 92 i~~F~~TSGTT~G~~K~IP~T~~~l 116 (578)
+.....||||| |.||-+..+...+
T Consensus 142 ~a~i~~TSGtT-G~PK~v~~~~~~~ 165 (502)
T PRK08276 142 GADMLYSSGTT-GRPKGIKRPLPGL 165 (502)
T ss_pred ceEEEECCCCC-CCCceEEEccCCc
Confidence 45667899999 9999998775543
No 148
>TIGR02778 ligD_pol DNA polymerase LigD, polymerase domain. DNA repair of double-stranded breaks by non-homologous end joining (NHEJ) is accomplished by a two-protein system that is present in a minority of prokaryotes. One component is the Ku protein (see TIGR02772), which binds DNA ends. The other is a DNA ligase, a protein that is a multidomain polypeptide in most of those bacteria that have NHEJ, a permuted polypeptide in Mycobacterium tuberculosis and a few other species, and the product of tandem genes in some other bacteria. This model represents the polymerase domain.
Probab=30.12 E-value=42 Score=34.05 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=33.4
Q ss_pred cccCCCeeEEEecccCCCCcceeeecchhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|..-.+..|.+|||++ |-.-++|...+. .++.+. ++..++..+-..+ |+.
T Consensus 142 ~L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~-fa~~iA~~l~~~~--Pd~ 193 (245)
T TIGR02778 142 LLDELGLESFVKTSGGK-GLHVYVPLRPTLSWDEVKD-FAKALAQALAQQM--PDR 193 (245)
T ss_pred HHHHcCCccceEccCCC-eEEEEEECCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44455577899999998 999999999854 233222 3445544454444 655
No 149
>cd04861 LigD_Pol_like LigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. PaeLigD is monomeric, containing an N-terminal phosphoesterase module, a central polymerase (Pol) domain, and a C-terminal ATP-dependent ligase domain. Mycobacterium tuberculosis (Mt)LigD, also found in this group, is monomeric and contains the same modules but these are arranged differently: an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase do
Probab=28.17 E-value=47 Score=33.31 Aligned_cols=51 Identities=24% Similarity=0.187 Sum_probs=32.6
Q ss_pred cccCCCeeEEEecccCCCCcceeeecchhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|..-.+..|.+|||++ |=.-++|..... .++.+. ++..++..+-.++ |+.
T Consensus 126 ~L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~-fa~~iA~~l~~~~--P~~ 177 (227)
T cd04861 126 LLDELGLESFPKTSGGK-GLHVYVPLAPRYTWDEVRA-FAKALARELARRL--PDL 177 (227)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44445567899999998 999999998754 233222 3444444444444 654
No 150
>cd04865 LigD_Pol_like_2 LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=27.82 E-value=48 Score=33.28 Aligned_cols=51 Identities=20% Similarity=0.133 Sum_probs=33.1
Q ss_pred cccCCCeeEEEecccCCCCcceeeecchhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|-.-.+..|.+|||.+ |-.-++|..... .++.+. ++..++..+-..+ |+.
T Consensus 127 ~L~~lgL~sf~KTSG~k-GlHv~vPl~~~~~~~~~r~-fa~~iA~~l~~~~--P~~ 178 (228)
T cd04865 127 VLDELGLRGYPKTSGAR-GLHIYVPIAPRYTFEEVRR-FAELLAREVERRL--PDL 178 (228)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44445577899999998 999999998754 233222 3445544454544 655
No 151
>PRK13390 acyl-CoA synthetase; Provisional
Probab=26.81 E-value=38 Score=37.20 Aligned_cols=19 Identities=42% Similarity=0.392 Sum_probs=15.4
Q ss_pred eEEEecccCCCCcceeeecc
Q 008073 93 VCFFYSSGTSSMKPKLIPYF 112 (578)
Q Consensus 93 ~~F~~TSGTT~G~~K~IP~T 112 (578)
.+...||||| |.||-+..+
T Consensus 151 a~i~~TSGTT-G~PKgV~~~ 169 (501)
T PRK13390 151 AVMLYSSGTT-GFPKGIQPD 169 (501)
T ss_pred EEEEeCCCCC-CCCCEEEee
Confidence 4556899999 999998853
No 152
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=26.23 E-value=61 Score=24.89 Aligned_cols=19 Identities=21% Similarity=0.737 Sum_probs=14.2
Q ss_pred cccCCEEEEeeeeCCCCEEEEE
Q 008073 402 YRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 402 Yr~GDvV~v~g~~~~~P~i~f~ 423 (578)
|.+||+|+..+ ..|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999987 57755443
No 153
>cd04862 PaeLigD_Pol_like PaeLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. PaeLigD is monomeric, containing an N-terminal phosphoesterase module, a central polymerase (Pol) domain, and a C-terminal ATP-dependent ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The PaeLigD Pol domain in vitro, in a manganese-dependent fashion, catalyzes templated extensions of 5'-overhang duplex DNA, and nontemplated single-nu
Probab=24.82 E-value=59 Score=32.67 Aligned_cols=51 Identities=22% Similarity=0.192 Sum_probs=32.0
Q ss_pred cccCCCeeEEEecccCCCCcceeeecchhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|-.-.+..|.+|||+. |-.-++|..... .++.+. ++..++..+-.++ |+.
T Consensus 126 ~L~~lgL~~~~KTSG~k-GlHV~vPl~~~~~~~~~r~-fa~~lA~~l~~~~--P~~ 177 (227)
T cd04862 126 LLDELGLESFVKTSGGK-GLHVVVPLAPRAGWDEVKA-FAKALAQHLARTN--PDR 177 (227)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44445567899999998 999999998754 233222 3444444444444 654
No 154
>PF12627 PolyA_pol_RNAbd: Probable RNA and SrmB- binding site of polymerase A; PDB: 1OU5_B 3H38_A 3H3A_B 3H39_B 3H37_A 3AQN_A 3AQK_A 3AQM_B 3AQL_B 1MIY_A ....
Probab=24.80 E-value=1.2e+02 Score=23.33 Aligned_cols=41 Identities=17% Similarity=0.493 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHHhCCCCHHHHHHHHHHhcCCCccCcccccCCCCc
Q 008073 252 DITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVR 298 (578)
Q Consensus 252 ~i~~~~iR~~l~~~lg~p~p~rA~~L~~~~~~~~~~g~~~~lWP~L~ 298 (578)
.++.+.|+..+.+++..|+|..+=++...+ |+++.++|++.
T Consensus 21 ~is~ERi~~El~kil~~~~~~~~~~~l~~~------gll~~ifP~l~ 61 (64)
T PF12627_consen 21 KISKERIREELEKILSSPNPSRAFKLLDEL------GLLEYIFPELD 61 (64)
T ss_dssp GS-HHHHHHHHHHHHTSTTHHHHHHHHHHT------TCHHHHSTTHH
T ss_pred cCCHHHHHHHHHHHHcCCCHHHHHHHHHHc------CCHHHHCcccc
Confidence 366788999999999889887664444433 57888999873
No 155
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=24.76 E-value=59 Score=32.56 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=31.2
Q ss_pred cccCCCeeEEEecccCCCCcceeeecc-hhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYF-DSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T-~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|-.-.+..|.+|||++ |-.-++|.. .+. .++.+. ++..++..+-..+ |+.
T Consensus 121 ~L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~-fa~~iA~~l~~~~--P~~ 173 (223)
T cd04866 121 ILDALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRL-FTEFIAEYLCQQF--PEL 173 (223)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44445567899999998 999999999 432 233222 3444444444444 654
No 156
>cd04863 MtLigD_Pol_like MtLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Mycobacterium tuberculosis (Mt)LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. MtLigD is monomeric and contains an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The MtLigD Pol domain is stimulated by manganese, is error-prone, and prefers adding rNTPs to dNTPs in vitro. The MtLigD Pol domain has been shown to prefer DNA gapped substrates
Probab=23.36 E-value=65 Score=32.44 Aligned_cols=51 Identities=20% Similarity=0.129 Sum_probs=32.6
Q ss_pred cccCCCeeEEEecccCCCCcceeeecchhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|-.-.+..|.+|||.+ |-.-+||...+. .++.+. ++..++..+-..+ |+.
T Consensus 130 ~L~~lgL~s~~KTSG~k-GlHV~vPl~~~~~~~~vr~-fa~~~A~~l~~~~--P~~ 181 (231)
T cd04863 130 RLAALGLASFPKTSGSK-GLHLYVPLDGPVSSDQTKE-FAKALARELEREH--PDL 181 (231)
T ss_pred HHHHcCCccceECCCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44445567899999998 999999998755 233222 3444444444444 654
No 157
>cd04864 LigD_Pol_like_1 LigD_Pol_like_1: Polymerase (Pol) domain of mostly bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 1. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=22.66 E-value=69 Score=32.20 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=32.8
Q ss_pred cccCCCeeEEEecccCCCCcceeeecchhH-HHHHHHHHHHHHHHHHHHhcCCCCC
Q 008073 86 LLAVDPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRLFPPKH 140 (578)
Q Consensus 86 vl~~~pi~~F~~TSGTT~G~~K~IP~T~~~-l~~~~~~~~~~~~~~~~~~~~~p~~ 140 (578)
+|-.-.+..|.+|||.+ |-.-++|..... .++.+. ++..++..+-..+ |+.
T Consensus 127 ~L~~~gL~~f~KTSG~k-GlHv~vPl~~~~~~~~~r~-fa~~lA~~l~~~~--P~~ 178 (228)
T cd04864 127 LLDELGLPSFVKTTGSR-GFHVVVPLDGRGDFDDVRA-FAAEAADALAKRD--PDL 178 (228)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC--chh
Confidence 44445567899999998 999999998754 233222 3444444454444 655
No 158
>COG5475 Uncharacterized small protein [Function unknown]
Probab=21.46 E-value=93 Score=24.16 Aligned_cols=24 Identities=17% Similarity=0.408 Sum_probs=19.7
Q ss_pred cccCCEEEEeeeeCCCCEEEEEeeCCC
Q 008073 402 YRLGDIVKVVDFYNSSPQVEFVMRAPK 428 (578)
Q Consensus 402 Yr~GDvV~v~g~~~~~P~i~f~gR~~~ 428 (578)
|.+||+|++.. ..|++.+.+=..+
T Consensus 5 FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEeec---CCceEEEeccccC
Confidence 67999999987 6898888876664
No 159
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=21.00 E-value=72 Score=26.62 Aligned_cols=25 Identities=28% Similarity=0.601 Sum_probs=15.8
Q ss_pred cCCCceEEEEEccCCc--eeccccCCE
Q 008073 383 VEIGKMYEVVVTTYRG--FYRYRLGDI 407 (578)
Q Consensus 383 le~G~~YelVvTt~~G--LyRYr~GDv 407 (578)
--.|+.|+++|.+..| +|||--|=.
T Consensus 20 f~sgq~~D~~v~d~~g~~vwrwS~~~~ 46 (82)
T PF12690_consen 20 FPSGQRYDFVVKDKEGKEVWRWSDGKM 46 (82)
T ss_dssp ESSS--EEEEEE-TT--EEEETTTT--
T ss_pred eCCCCEEEEEEECCCCCEEEEecCCch
Confidence 3479999999998888 999875543
Done!