Query 008073
Match_columns 578
No_of_seqs 155 out of 695
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 17:29:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008073.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008073hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pg4a_ e.23.1.1 (A:) Acetyl-C 99.2 1.4E-09 1E-13 120.1 25.2 223 294-564 373-638 (643)
2 d1lcia_ e.23.1.1 (A:) Lucifera 98.9 2E-08 1.5E-12 106.4 18.4 132 292-445 301-457 (541)
3 d1ry2a_ e.23.1.1 (A:) Acetyl-C 98.7 3E-07 2.2E-11 100.4 20.2 131 294-445 360-524 (640)
4 d1mdba_ e.23.1.1 (A:) Dihydrox 98.2 4.2E-06 3.1E-10 87.8 13.9 131 293-445 296-451 (536)
5 d1amua_ e.23.1.1 (A:) Phenylal 98.2 6.8E-06 5E-10 86.0 15.1 131 294-445 276-435 (514)
6 d3cw9a1 e.23.1.1 (A:1-503) 4-c 98.2 4.2E-05 3.1E-09 78.5 19.9 161 293-483 270-453 (503)
7 d1v25a_ e.23.1.1 (A:) Long cha 98.0 7.5E-06 5.5E-10 86.3 11.5 59 384-446 372-450 (534)
8 d1amua_ e.23.1.1 (A:) Phenylal 67.4 1.4 0.0001 44.0 3.4 28 89-117 165-192 (514)
9 d2cc6a1 d.230.2.1 (A:2-65) Fla 49.3 18 0.0013 25.9 5.9 48 432-480 12-59 (64)
10 d2ux9a1 d.230.2.1 (A:2-67) Unc 35.8 25 0.0018 25.3 4.8 47 432-479 14-60 (66)
No 1
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=99.17 E-value=1.4e-09 Score=120.12 Aligned_cols=223 Identities=16% Similarity=0.123 Sum_probs=119.2
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhC--CCCccccccccCcee-eee-ecCCCCC--CCCcceeccCCceEEEEee
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAG--EVPVLGGDYFASECY-VGI-NLDIAQP--PQTTRFVMLPTAAYFEFLP 364 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g--~v~~~~~~y~asEg~-~~i-~~~~~~~--~~~~~~~l~~~~~f~EFip 364 (578)
.+.|+++ .+|+. ....+.+.+.+| +++++ ++||.||+. +.+ +.....+ ++..+. ..++ .-+..++
T Consensus 373 l~sLr~i---~~~G~pl~~~~~~~~~~~~g~~~~~i~-~~yG~TE~g~~~~~~~~~~~~~~~gs~G~-p~~g-~~v~ivd 446 (643)
T d1pg4a_ 373 RSSLRIL---GSVGEPINPEAWEWYWKKIGKEKCPVV-DTWWQTETGGFMITPLPGAIELKAGSATR-PFFG-VQPALVD 446 (643)
T ss_dssp CTTCCEE---EEESSCCCHHHHHHHHHHTTTTCSCEE-EEBCCGGGSSCSBCCCTTTCCBCTTCCBS-BCTT-CCEEEEC
T ss_pred CCceEEE---EEEeCCCCHHHHHHHHHHhCCCCceEE-EeechhhccceEEecCCCccCCCCCcccc-ccCC-CEEEEEC
Confidence 4667744 44332 444456666664 48899 999999963 222 1111111 111111 2233 2345565
Q ss_pred CCCCCccccCCceeeccccCCCceEEEEEccC-----Ccee----------------ccccCCEEEEeeeeCCCCEEEEE
Q 008073 365 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFV 423 (578)
Q Consensus 365 ~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~-----~GLy----------------RYr~GDvV~v~g~~~~~P~i~f~ 423 (578)
.+. .+++.|+.+||+|+.. .|+| -|+|||++++.. .-.+.|+
T Consensus 447 ~~g-------------~~~~~g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i~ 509 (643)
T d1pg4a_ 447 NEG-------------HPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDE----DGYYWIT 509 (643)
T ss_dssp TTC-------------CBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECT----TSCEEEE
T ss_pred CCC-------------CCCCCCceEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEEECC----CceEEEe
Confidence 432 3467899999999863 2333 288999999853 3479999
Q ss_pred eeCCC---ccccccCHHHHHHHHHHHHHHhccccCceeEEEEEe--ecCCCCCceEEEEEEeecCccccCCCHHHHHHHH
Q 008073 424 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGY--TNLESSPKKLMIFVEIREGCTKLRDSVAILRRCC 498 (578)
Q Consensus 424 gR~~~---l~gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~--~~~~~~~~~y~l~vE~~~~~~~~~~~~~~l~~~~ 498 (578)
||.++ +.|++++..+|+++|.+. .+ +.+-+|+ .+.. .....+.||.+..+ ...+.+..+++.
T Consensus 510 GR~dd~ik~~G~ri~p~eIE~~l~~~-------p~--V~eaaVvg~~d~~-~ge~~~a~Vv~~~~---~~~~~~~~~~i~ 576 (643)
T d1pg4a_ 510 GRVDDVLNVSGHRLGTAEIESALVAH-------PK--IAEAAVVGIPHAI-KGQAIYAYVTLNHG---EEPSPELYAEVR 576 (643)
T ss_dssp EESSSEEEETTEEEEHHHHHHHHHHS-------TT--EEEEEEEEEEETT-TEEEEEEEEEECTT---CCCCHHHHHHHH
T ss_pred cccccEEEECCEEECHHHHHHHHHhC-------CC--cceEEEEEEECCC-CCeEEEEEEEECCC---CCCCHHHHHHHH
Confidence 99998 789999999999988753 22 3344332 2221 11244578877643 223433333444
Q ss_pred HHHHHHhChhHHHhhhcCCCCCcEEEEeCC------CcHHH--HHHHHHHcCCCCCCCCCCcccCCHhHHHHHh
Q 008073 499 SSLEDAFGSIYKVQRDRGEISPLSVSIVKP------GTFDR--LLQVAIEKGAPASQYKPPKIVRNREIVEFME 564 (578)
Q Consensus 499 ~~ld~~Ln~~Y~~~R~~g~l~p~~v~~v~~------G~f~~--~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~ 564 (578)
+.+.+.|.+ .-.|-.|.+|+. |=..+ +++ +..|. ..+.+-+--+.|++.++.+.
T Consensus 577 ~~~~~~L~~---------~~vP~~i~~v~~lP~T~sGKi~R~~Lr~--~~~~~-~~~~~~~~t~~~p~~l~~~~ 638 (643)
T d1pg4a_ 577 NWVRKEIGP---------LATPDVLHWTDSLPKTRSGKIMRRILRK--IAAGD-TSNLGDTSTLADPGVVEKLL 638 (643)
T ss_dssp HHHHHHTCG---------GGCCSEEEECSCCCBCTTSCBCHHHHHH--HHHTC-----------CCTTHHHHHH
T ss_pred HHHHhhCCc---------ccCccEEEEECCCCCCCCcCccHHHHHH--HhcCC-ccccCCccccCChHHHHHHH
Confidence 444444421 235667777652 32111 222 22332 22344455577888776654
No 2
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=98.88 E-value=2e-08 Score=106.41 Aligned_cols=132 Identities=14% Similarity=0.083 Sum_probs=79.7
Q ss_pred ccCCCCceeEEEecCch---HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCC--CCCcceeccCCceEEEEeeCC
Q 008073 292 KLWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP--PQTTRFVMLPTAAYFEFLPFD 366 (578)
Q Consensus 292 ~lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~--~~~~~~~l~~~~~f~EFip~~ 366 (578)
.-+++|+ .+.+|+. ..-...+.+.++...++ .+||+||+...+...+..+ +...+. ..|+. -+-.++++
T Consensus 301 ~~~~~l~---~v~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~svG~-p~~~~-~~~i~d~d 374 (541)
T d1lcia_ 301 YDLSNLH---EIASGGAPLSKEVGEAVAKRFHLPGIR-QGYGLTETTSAILITPEGDDKPGAVGK-VVPFF-EAKVVDLD 374 (541)
T ss_dssp SCCTTCC---EEECTTCCCCHHHHHHHHHHTTCSCCB-CEECCGGGSSCSEECCCC---CCCCBE-ECTTC-EEEEECTT
T ss_pred cccccce---EEEecccccccccccccccccCCceee-ecCCccccCceEEecCcccCCCCcccc-ccCCC-EEEEEECC
Confidence 3456776 4455553 33444555666656677 8999999744332222211 111122 33443 34556554
Q ss_pred CCCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC-
Q 008073 367 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 428 (578)
Q Consensus 367 ~~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 428 (578)
+ + ..+..|+.+||+|... .|.| -|+|||++.+.. .-.+.|+||.++
T Consensus 375 ~-------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~~TGDl~~~~~----~G~~~~~GR~~d~ 438 (541)
T d1lcia_ 375 T-------G-----KTLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDE----DEHFFIVDRLKSL 438 (541)
T ss_dssp T-------C-----CBCCTTCCEEEEEESTTSCSEETTBHHHHHHHBCTTSCEEEEEEEEECT----TCCEEEC-----C
T ss_pred C-------C-----cCCCCCCeEEEEEccCccCCeeCCChhhhhhcccCCccccCCCeeEEcC----CeEEEEeeeecCE
Confidence 3 2 2356899999999764 3433 589999999853 236889999998
Q ss_pred --ccccccCHHHHHHHHHH
Q 008073 429 --SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 --l~gEkv~e~~v~~av~~ 445 (578)
+.|++++..+|++++.+
T Consensus 439 i~~~G~~v~~~~IE~~l~~ 457 (541)
T d1lcia_ 439 IKYKGYQVAPAELESILLQ 457 (541)
T ss_dssp EEETTEEECHHHHHHHHHT
T ss_pred EEECCEEECHHHHHHHHHh
Confidence 78999999999988865
No 3
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.68 E-value=3e-07 Score=100.39 Aligned_cols=131 Identities=16% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCCCceeEEEecCch---HHHHHHHHHHhCC--CCccccccccCceeeee--ecCCCC-C--CCCcceeccCCceEEEEe
Q 008073 294 WPNVRYIKCVTTGSM---SQYCSKIKYYAGE--VPVLGGDYFASECYVGI--NLDIAQ-P--PQTTRFVMLPTAAYFEFL 363 (578)
Q Consensus 294 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~--v~~~~~~y~asEg~~~i--~~~~~~-~--~~~~~~~l~~~~~f~EFi 363 (578)
.+.|+ ++.+|+. ....+.+.+.+|. ++++ .+||.||..... +..... + +...+. ..++ .-...+
T Consensus 360 l~sLr---~v~~gG~~l~~~~~~~~~~~~g~~~~~i~-~~yg~te~~~~~~~~~~~~~~~~~~gs~G~-p~~g-~~~~i~ 433 (640)
T d1ry2a_ 360 LKSLR---CLGSVGEPIAAEVWEWYSEKIGKNEIPIV-DTYWQTESGSHLVTPLAGGVTPMKPGSASF-PFFG-IDAVVL 433 (640)
T ss_dssp CTTCC---EEEECSSCCCHHHHHHHHHTTSCSSSCEE-ECBCCTTTCSCSEECCTTTCCCCCTTCCCE-ECTT-CCEEEE
T ss_pred CCceE---EEEEecccCcHHHHHHHHHhcCCCcceEE-eeecccccccccccccCCCcCCCCCccccc-ccCC-ceEEEE
Confidence 45665 5566653 4444566666763 6788 999999974422 111111 0 011112 2222 224556
Q ss_pred eCCCCCccccCCceeeccccCCCceEEEEEccC-----Ccee----------------ccccCCEEEEeeeeCCCCEEEE
Q 008073 364 PFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEF 422 (578)
Q Consensus 364 p~~~~~~~~~~~~~l~~~ele~G~~YelVvTt~-----~GLy----------------RYr~GDvV~v~g~~~~~P~i~f 422 (578)
+++. ++.+ ...+..+||++... .|.| -|+|||++++.. .-.+.|
T Consensus 434 d~~~-------~~~~----~~~~~~Gel~i~~~~p~~~~gy~~~~e~t~~~~~~~~~gw~~TGDlg~~d~----dG~l~i 498 (640)
T d1ry2a_ 434 DPNT-------GEEL----NTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDK----DGYIWI 498 (640)
T ss_dssp CSSS-------TTCE----ECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECT----TCCEEE
T ss_pred eCCC-------Cccc----CCCCceEEEEEEecCCCcccccccCHHHHHhhhccCCCCeEEcCCceeECC----CCCEEE
Confidence 5443 2222 13466799999763 2333 289999999853 237999
Q ss_pred EeeCCC---ccccccCHHHHHHHHHH
Q 008073 423 VMRAPK---SSFEIISERDLMSAMES 445 (578)
Q Consensus 423 ~gR~~~---l~gEkv~e~~v~~av~~ 445 (578)
+||.++ +.|++++..+|+++|.+
T Consensus 499 ~GR~dd~Ik~~G~~I~p~eIE~~l~~ 524 (640)
T d1ry2a_ 499 LGRVDDVVNVSGHRLSTAEIEAAIIE 524 (640)
T ss_dssp CSCTTSCBCSSSCCBCHHHHHHHHHS
T ss_pred EEcCCCEEEECCEEECHHHHHHHHHh
Confidence 999998 78999999999988874
No 4
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=98.22 E-value=4.2e-06 Score=87.78 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=78.8
Q ss_pred cCCCCceeEEEecCch--HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCC---CCcceeccCCceEEEEeeCCC
Q 008073 293 LWPNVRYIKCVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP---QTTRFVMLPTAAYFEFLPFDM 367 (578)
Q Consensus 293 lWP~L~~i~~~~~G~~--~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~---~~~~~~l~~~~~f~EFip~~~ 367 (578)
..+.++.+ +.+|.. .....++.+.+| .... ..|+.+|...++........ ...+..+.+. . .-.|..++
T Consensus 296 ~~~~~~~~--~~gG~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~-~-~~~v~~~~ 369 (536)
T d1mdba_ 296 DLSSLQVL--QVGGAKFSAEAARRVKAVFG-CTLQ-QVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPY-D-ESRVWDDH 369 (536)
T ss_dssp CCTTCCEE--EEESSCCCHHHHTTHHHHTC-SEEE-EEEECTTSCEEECCTTSCHHHHHHCCCEESSTT-C-EEEEECTT
T ss_pred ccCcceeE--EEeccccccccccchhhccC-ceee-eccccccccccccccccccccccCCcccCCCCc-c-eEEEEcCC
Confidence 45666633 333332 444455566665 5666 67777876555533222110 0011212222 2 22333332
Q ss_pred CCccccCCceeeccccCCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC--
Q 008073 368 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 428 (578)
Q Consensus 368 ~~~~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 428 (578)
+ .++..|+.+||++... .|.| .|+|||++.+.. .=.+.|+||.++
T Consensus 370 -------g-----~~~~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~~tGD~~~~~~----dG~l~~~GR~~d~i 433 (536)
T d1mdba_ 370 -------D-----RDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTR----DGYIVVEGRAKDQI 433 (536)
T ss_dssp -------S-----CBCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECT----TSCEEEEEEGGGCE
T ss_pred -------C-----CeecccccceeecCCCccccccccccccccccccccCccccCccccccC----CCceecCCCcceEE
Confidence 2 3467899999999764 3332 489999999854 237899999998
Q ss_pred -ccccccCHHHHHHHHHH
Q 008073 429 -SSFEIISERDLMSAMES 445 (578)
Q Consensus 429 -l~gEkv~e~~v~~av~~ 445 (578)
++|++++..+|++++.+
T Consensus 434 ~~~G~~i~p~~IE~~l~~ 451 (536)
T d1mdba_ 434 NRGGEKVAAEEVENHLLA 451 (536)
T ss_dssp ECSSCEECHHHHHHHHTT
T ss_pred EECCEEECHHHHHHHHHh
Confidence 88999999999888864
No 5
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=98.20 E-value=6.8e-06 Score=86.01 Aligned_cols=131 Identities=11% Similarity=0.144 Sum_probs=80.3
Q ss_pred CCCCceeEEEecCchHHHHHHHHHHhCCCCccccccccCceee--eeecCCCCCC-CCcceeccCCceEEEEeeCCCCCc
Q 008073 294 WPNVRYIKCVTTGSMSQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPP-QTTRFVMLPTAAYFEFLPFDMEKN 370 (578)
Q Consensus 294 WP~L~~i~~~~~G~~~~y~~~l~~~~g~v~~~~~~y~asEg~~--~i~~~~~~~~-~~~~~~l~~~~~f~EFip~~~~~~ 370 (578)
.++++ .+..|+.....+.+++++.+++++ ..||+||+.. +......... ..+.............++.+
T Consensus 276 ~~~l~---~~~~~G~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~---- 347 (514)
T d1amua_ 276 ILSIQ---TLITAGSATSPSLVNKWKEKVTYI-NAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDEN---- 347 (514)
T ss_dssp CCSCS---EEEEESSCCCHHHHHHHTTTSEEE-EEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEECTT----
T ss_pred ccccc---EEEEecccCCHHHhhhhccceeEE-EeeccccCceeeeeccccccccCcccccccceeeeeEeeeccc----
Confidence 45666 334444433334556666678888 9999999733 2222211111 10111111122223333322
Q ss_pred cccCCceeeccccCCCceEEEEEccC---Ccee--------------------ccccCCEEEEeeeeCCCCEEEEEeeCC
Q 008073 371 EAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------------RYRLGDIVKVVDFYNSSPQVEFVMRAP 427 (578)
Q Consensus 371 ~~~~~~~l~~~ele~G~~YelVvTt~---~GLy--------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~ 427 (578)
. ..+.+|+.+||.|... .|.| -|+|||++++.. .-.+.|+||.+
T Consensus 348 ----~-----~~~~~g~~GEl~v~~~~~~~gY~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~l~i~GR~~ 414 (514)
T d1amua_ 348 ----L-----QLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLS----DGNIEYLGRID 414 (514)
T ss_dssp ----S-----CBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECT----TSCEEEEEEGG
T ss_pred ----c-----eecCCCCeeEEEEccCcccccccccccccceeeEeccccCCCceEEECCEEEECC----CCcEEEEeccc
Confidence 2 2466899999999653 3433 389999999954 23689999999
Q ss_pred C---ccccccCHHHHHHHHHH
Q 008073 428 K---SSFEIISERDLMSAMES 445 (578)
Q Consensus 428 ~---l~gEkv~e~~v~~av~~ 445 (578)
+ +.|+|+++.+|+++|.+
T Consensus 415 d~i~~~G~~i~p~~IE~~l~~ 435 (514)
T d1amua_ 415 NQVKIRGHRVELEEVESILLK 435 (514)
T ss_dssp GEEEETTEEEEHHHHHHHHTT
T ss_pred CEEEECCEEECHHHHHHHHHh
Confidence 8 77999999999988875
No 6
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=98.16 E-value=4.2e-05 Score=78.54 Aligned_cols=161 Identities=14% Similarity=0.053 Sum_probs=89.4
Q ss_pred cCCCCceeEEEecCc-h-HHHHHHHHHHhCCCCccccccccCceeeeeecCCCCCCCCcceeccCCceEEEEeeCCCCCc
Q 008073 293 LWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN 370 (578)
Q Consensus 293 lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~~~~~~y~asEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~ 370 (578)
..+.|++ ++.+|. + .......+..++ .++. ..||.+|+...+............. ..+... ........
T Consensus 270 ~~~~Lr~--i~~gG~~~~~~~~~~~~~~~~-~~~~-~~yg~~e~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~--- 340 (503)
T d3cw9a1 270 KLDSLRH--VTFAGATMPDAVLETVHQHLP-GEKV-NIYGTTEAMNSLYMRQPKTGTEMAP-GFFSEV-RIVRIGGG--- 340 (503)
T ss_dssp CCTTCCE--EEECSSCCCHHHHHHHHHHCC-SEEE-EEEEETTTEEEEEEESCSSSSEEBC-CTTCCE-EEECTTSC---
T ss_pred cccceEE--EEecccccccccccccccccc-cccc-ccccccccceeeeeccccccccccc-cccccc-eeeeeecc---
Confidence 3467773 334443 2 333444445554 5666 8999999866554443322211111 111111 22221111
Q ss_pred cccCCceeeccccCCCceEEEEEccCCc----ee-------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---cc
Q 008073 371 EAVGEETVDFSGVEIGKMYEVVVTTYRG----FY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 430 (578)
Q Consensus 371 ~~~~~~~l~~~ele~G~~YelVvTt~~G----Ly-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~ 430 (578)
.++ .+..|+.+++++..... .| -|+|||+++... .-.+.|+||.++ ++
T Consensus 341 ---~~~-----~~~~g~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~g~~~TgD~g~~~~----dG~l~~~GR~~d~ik~~ 408 (503)
T d3cw9a1 341 ---VDE-----IVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTP----EGTVRILGRVDDMIISG 408 (503)
T ss_dssp ---TTC-----BCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEECT----TSCEEEEEESSCCEEET
T ss_pred ---cCc-----ccCCCccccccccccccccccccCChhhhHHHhcCCceeccccccccc----CCeEEeCCCcCCeEEEC
Confidence 122 34578888877754322 11 289999999854 356999999998 88
Q ss_pred ccccCHHHHHHHHHHHHHHhccccCceeEEEEEee-cCCCCCceEEEEEEeecC
Q 008073 431 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREG 483 (578)
Q Consensus 431 gEkv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~ 483 (578)
|++++..+|++++.+. .+ +.+-+++. +........+.||+...+
T Consensus 409 G~~v~~~~IE~~l~~~-------p~--V~~~~v~~~~~~~~g~~~~a~v~~~~~ 453 (503)
T d3cw9a1 409 GENIHPSEIERVLGTA-------PG--VTEVVVIGLADQRWGQSVTACVVPRLG 453 (503)
T ss_dssp TEEECHHHHHHHHTTS-------TT--EEEEEEEEEEETTTEEEEEEEEEECTT
T ss_pred CEEECHHHHHHHHHhC-------CC--ccEEEEEEEECCCCCeEEEEEEEeCCC
Confidence 9999999998888642 23 22333321 111112356678887643
No 7
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=98.04 E-value=7.5e-06 Score=86.32 Aligned_cols=59 Identities=31% Similarity=0.294 Sum_probs=44.6
Q ss_pred CCCceEEEEEccC---Ccee--------------ccccCCEEEEeeeeCCCCEEEEEeeCCC---ccccccCHHHHHHHH
Q 008073 384 EIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAM 443 (578)
Q Consensus 384 e~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---l~gEkv~e~~v~~av 443 (578)
..|+.+||.|... .|.| -|+|||++++.. .-.+.|+||.++ +.|+|++..+|+++|
T Consensus 372 ~~~~~Gel~v~g~~v~~gY~~~~~~t~~~~~~dg~~~TGDlg~~~~----~G~l~~~GR~~~~i~~~G~~v~~~eIE~~l 447 (534)
T d1v25a_ 372 DGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDE----EGYVEIKDRLKDLIKSGGEWISSVDLENAL 447 (534)
T ss_dssp SSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECT----TCCEEEEEESSCEEEETTEEEEHHHHHCC-
T ss_pred CCCeeEEEEEcCCcccceecCChhhhhhhcccCCCCccCceeEECC----CccEEEecccccEEEECCEEECHHHHHHHH
Confidence 3578899999763 4444 389999999853 226899999998 779999999999988
Q ss_pred HHH
Q 008073 444 ESF 446 (578)
Q Consensus 444 ~~~ 446 (578)
.+.
T Consensus 448 ~~~ 450 (534)
T d1v25a_ 448 MGH 450 (534)
T ss_dssp ---
T ss_pred HhC
Confidence 753
No 8
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=67.42 E-value=1.4 Score=44.04 Aligned_cols=28 Identities=29% Similarity=0.333 Sum_probs=17.8
Q ss_pred CCCeeEEEecccCCCCcceeeecchhHHH
Q 008073 89 VDPLVCFFYSSGTSSMKPKLIPYFDSALS 117 (578)
Q Consensus 89 ~~pi~~F~~TSGTT~G~~K~IP~T~~~l~ 117 (578)
++.+.+...||||| |+||.++.|...+.
T Consensus 165 ~~d~a~i~~TSGTT-G~PK~v~~s~~~~~ 192 (514)
T d1amua_ 165 STDLAYVIYTSGTT-GNPKGTMLEHKGIS 192 (514)
T ss_dssp TTSEEEEEEEC------CEEEEEESHHHH
T ss_pred cccceEEEEccCCC-CCcccccccccccc
Confidence 34456678999999 99999999988653
No 9
>d2cc6a1 d.230.2.1 (A:2-65) Flavin-binding protein dodecin {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=49.33 E-value=18 Score=25.94 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=36.4
Q ss_pred cccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEEe
Q 008073 432 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEI 480 (578)
Q Consensus 432 Ekv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~ 480 (578)
.+..|+.+++||.+|.+.+.++.++.+.+.....+. +.-.||.+-+..
T Consensus 12 ~~S~edAi~~Ai~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lKv 59 (64)
T d2cc6a1 12 EESFTAAADDAIDRAEDTLDNVVWAEVVDQGVEIGA-VEERTYQTEVQV 59 (64)
T ss_dssp SSCHHHHHHHHHHHHHHHCSCEEEEEEEEEEEECTT-SSSCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhCccCceEEEEEEEEEEEeC-CcEEEEEEEEEE
Confidence 567799999999999998865566777787776654 346789866543
No 10
>d2ux9a1 d.230.2.1 (A:2-67) Uncharacterized protein TTHA1431 {Thermus thermophilus [TaxId: 274]}
Probab=35.78 E-value=25 Score=25.31 Aligned_cols=47 Identities=21% Similarity=0.212 Sum_probs=34.9
Q ss_pred cccCHHHHHHHHHHHHHHhccccCceeEEEEEeecCCCCCceEEEEEE
Q 008073 432 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVE 479 (578)
Q Consensus 432 Ekv~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE 479 (578)
.+..|+.+++||.+|.+.+.++.++.+.+.....+. +.-.||.+-+.
T Consensus 14 ~~S~edAi~~Ai~~AskTl~ni~~~eV~e~~~~v~d-g~v~~yqv~lK 60 (66)
T d2ux9a1 14 EEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGE-AGVKEYQVVLE 60 (66)
T ss_dssp SSCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHhhhCccCcEEEEEEEEEEEEeC-CcEEEEEEEEE
Confidence 566799999999999998865566777777776653 33578886554
Done!