Your job contains 1 sequence.
>008078
MPSQQPYSPAEPRAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSVTKPF
IPCLITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVV
AFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRG
TPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQ
TGMKAEAVAVAVERAVLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVE
TEDSSRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPT
QPLHTAFPPAKRLKFSPNYGSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPAGMQG
ARQNPYSLFSLSNFISENNHQMSSDGIFGNNMVPKLRRVSTELNIGSSQSDNLSPDSHSS
VHSFGTELGGNQGCNSTKVGVRSIQLFGKIIHMKQPVESGFGDVVCPDDDGSKGFSERED
VNLPLDLSLTYTELLNRFGIQGRGSEVEDEVVAEACSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008078
(578 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 591 1.7e-101 3
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 607 9.7e-99 2
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 758 3.5e-75 1
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 601 6.9e-61 2
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 593 1.2e-60 2
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 604 1.0e-59 2
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 575 7.8e-58 2
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 577 1.9e-55 1
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 558 5.5e-54 1
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 542 2.5e-53 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 549 6.3e-53 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 539 5.6e-52 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 520 5.8e-50 1
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 509 8.5e-49 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 472 7.1e-45 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 468 1.9e-44 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 465 3.9e-44 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 463 6.4e-44 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 419 2.9e-39 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 322 2.4e-32 2
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 291 5.5e-25 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 177 4.3e-13 2
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 175 1.3e-10 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 174 2.6e-10 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 166 2.3e-09 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 158 1.7e-08 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 156 2.3e-08 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 157 2.6e-08 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 156 3.2e-08 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 156 1.3e-07 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 141 8.5e-07 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 143 2.5e-06 2
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 131 1.0e-05 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 136 1.9e-05 1
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 591 (213.1 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 115/235 (48%), Positives = 153/235 (65%)
Query: 6 PYSPAEPRAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQS--CPSITLSVTKPFIPC 63
P + +DP++W ACAG V++P +NS+V+YFPQGH E + C P + C
Sbjct: 7 PMKGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDFGNLPIPPMVLC 66
Query: 64 LITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFA 123
+ ++++AD +D+VFAK+ L P+ E + E + G N E+ +FA
Sbjct: 67 RVLAIKYMADAESDEVFAKLRLIPLKDDEYVDH--EYGDGEDSNGFE-SNSEKTP--SFA 121
Query: 124 KILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPR 183
K LT SDANNGGGFSVPR+CA++IFP L+Y +PPVQ I D+HG VW+FRHIYRGTPR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 184 RHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYG-NNGDSAGARW 237
RHLLTTGWS FVN+KKL+AGDS+VFMR G + +G+RR+ R G NG A W
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGW 236
Score = 403 (146.9 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 106/271 (39%), Positives = 149/271 (54%)
Query: 258 GLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTWIQGTVTAA 317
G PFEVVYYPRA ++F V+A +AMR+ W +GMR KM ETEDSSR++W GTV+A
Sbjct: 286 GRPFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAV 345
Query: 318 SMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLH-TAF-PPAKRLKF 375
++ D W SPW +L+V WDEP++LQN KRV+PW +E VS P+ T+F PP K+++
Sbjct: 346 NVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRL 405
Query: 376 S--PNYGSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPAGMQGARQNPYSLFSLSN 433
P+Y ++ + FP N L S+ L+ L N P G+QGAR N + + LS+
Sbjct: 406 PQHPDYNNLINSIPVPSFPSNPLIRSSP--LSSVLDNV---PVGLQGARHNAHQYYGLSS 460
Query: 434 FISENNHQMSSDGIFGNNMVPKLRRVSTELNIGSSQSDNLSPDSHSSVHSFGTELGGNQG 493
S+ +H + N P S +L+ S N+ + F T G
Sbjct: 461 --SDLHHY------YLNRPPPPPPPSSLQLS-PSLGLRNIDTKNEKGF-CFLTM--GTTP 508
Query: 494 CNSTKVGVRSIQLFGKIIHMKQPV-ESGFGD 523
CN TK I LFGK+I ++ + E G D
Sbjct: 509 CNDTKSKKSHIVLFGKLILPEEQLSEKGSTD 539
Score = 46 (21.3 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 533 KGFSEREDVNLPLDLSL--TYTELLNR----FGIQ 561
K F E +DV LDLS+ +Y EL + FGI+
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK 622
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 607 (218.7 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 122/231 (52%), Positives = 155/231 (67%)
Query: 11 EPRAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSC--PSITLSVTKPFIPCLITHV 68
+ +++DP++W ACAGS VQIPS+NS V+YF QGH E + P P I C + V
Sbjct: 3 QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVPPLILCRVVSV 62
Query: 69 EFLADPVTDQVFAKVVLNPITALEPSRNF-LEQQQE---QQPRGLSIGNVEENNVVAFAK 124
+FLAD TD+VFAK+ L P+ P + LE P GN +E +FAK
Sbjct: 63 KFLADAETDEVFAKITLLPL----PGNDLDLENDAVLGLTPPSSDGNGNGKEKPA-SFAK 117
Query: 125 ILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRR 184
LT SDANNGGGFSVPR+CA++IFP L+Y +PPVQ + DIHG W+FRHIYRGTPRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177
Query: 185 HLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGA 235
HLLTTGWS FVN+KKLIAGDS+VF+R G + +G+RR+ R G G +AG+
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR-GGLGSNAGS 227
Score = 393 (143.4 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 106/279 (37%), Positives = 141/279 (50%)
Query: 208 FMRDSRGKMYIG-LRRSVRYGNNGDSAGARWREQTGMKXXXXXXXXXXXXLGLPFEVVYY 266
F+RD L R GNN +A A R ++ G FEVVYY
Sbjct: 237 FLRDDESTTTTSKLMMMKRNGNNDGNAAATGR----VRVEAVAEAVARAACGQAFEVVYY 292
Query: 267 PRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTWIQGTVTAASMPDRGPWC 326
PRA +F V+A V SAMR+ W +GMR KM ETEDSSR++W GTV+A + D W
Sbjct: 293 PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 352
Query: 327 GSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLHTA-FPPAKRLKF-SPNYGSMTD 384
SPW +L+V WDEP++LQN KRVSPW +E VS +H + F P K+++ P
Sbjct: 353 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQPFEFPFHG 412
Query: 385 VEEEIFFPVNGLGNSTVGCLNPSLLN-YNTFPAGMQGARQ------NPY-SLFSLSNFIS 436
+ IF P G N+ G L N N PAG+QGARQ +P SL S N S
Sbjct: 413 TKFPIFSP--GFANNGGGESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSS 470
Query: 437 -ENNHQMSSDGIFGNNMVPKLRRVSTELNIGSSQSDNLS 474
N+++ S +F ++ P+ S S+N+S
Sbjct: 471 YTGNNKLHSPAMFLSSFNPRHHHYQAR---DSENSNNIS 506
Score = 51 (23.0 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 60/245 (24%), Positives = 97/245 (39%)
Query: 328 SPWGMLEVTWDEPEILQNAKRVSPWQ-IEFVSPTQ-PLH-TAFPPAKRLKFSPNYG--SM 382
SPW ++E+ + P I + SP + I P + P H T FP F+ N G SM
Sbjct: 376 SPW-LVELVSNMPTI--HLSPFSPRKKIRIPQPFEFPFHGTKFPIFSP-GFANNGGGESM 431
Query: 383 TDVEEEIFFPVNGL-----GNSTVGCLNPSLLNYNTFPAGMQGARQNPYSLFSLSNFISE 437
+ + G+ G +PSLL+ + + + ++F LS+F
Sbjct: 432 CYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKLHSPAMF-LSSFNPR 490
Query: 438 NNHQMSSDGIFGNNMVPKLRRVSTELNIGSSQSDNLSPDSHSSVHSFGTELGGNQGCNST 497
++H + D NN+ L + + +S S +H V FG + Q +
Sbjct: 491 HHHYQARDSENSNNISCSLTMGNPAMVQDKKKSVG-SVKTHQFV-LFGQPILTEQQVMNR 548
Query: 498 KVGVRSIQLFGKIIHMKQPVESGFG---DVVCPDDDGSKGFSEREDVNLPLDLSL--TYT 552
K R ++ + K V G + + K F E EDV LDLS+ +Y
Sbjct: 549 K---RFLEEEAEAEEEKGLVARGLTWNYSLQGLETGHCKVFMESEDVGRTLDLSVIGSYQ 605
Query: 553 ELLNR 557
EL +
Sbjct: 606 ELYRK 610
Score = 38 (18.4 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 290 TAGMRVKMVVETEDSSRMTWIQGTVT 315
T + +KM + D+ R TWI G T
Sbjct: 651 TKRLTIKMDIGG-DNVRKTWITGIRT 675
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 178/358 (49%), Positives = 218/358 (60%)
Query: 13 RAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSI-TL-SVTKPFIPCLITHVEF 70
R VDP IWRACAG+SVQIP ++SRVYYFPQGHVE CP + TL S T P +PC+IT ++
Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP-VPCIITSIQL 72
Query: 71 LADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENN-VVAFAKILTPS 129
LADPVTD+VFA ++L P+T + F + G G+V++NN V FAKILTPS
Sbjct: 73 LADPVTDEVFAHLILQPMT----QQQFTPTNYSRF--GRFDGDVDDNNKVTTFAKILTPS 126
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
DANNGGGFSVPRFCADS+FP LN+Q+DPPVQ + VTDIHGAVW+FRHIYRGTPRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXX 249
GWSKFVN KKLIAGDSVVFMR S +M+IG+RR+ ++G S+ E G
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 246
Query: 250 XXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMR---------VFWTAGMRVKMVVE 300
G P + + R+G A V D+ R VF+ A + VV
Sbjct: 247 AKEDD---GSPKKT--FRRSGNGKLTAEA-VTDAINRASQGLPFEVVFYPAAGWSEFVVR 300
Query: 301 TED---SSRMTWIQGTVTAASMPDRGPWCGSPW--GMLEVTWDEPEILQNAKRVSPWQ 353
ED S M W GT +M W G++ T+ E R SPW+
Sbjct: 301 AEDVESSMSMYWTPGTRVKMAMETEDS-SRITWFQGIVSSTYQET----GPWRGSPWK 353
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 144/284 (50%), Positives = 198/284 (69%)
Query: 258 GLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTWIQGTVTAA 317
GLPFEVV+YP AGW++F+VRAE V+S+M ++WT G RVKM +ETEDSSR+TW QG V++
Sbjct: 281 GLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSS- 339
Query: 318 SMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLHTAFPPAKRLKF-S 376
+ + GPW GSPW L++TWDEPEILQN KRV+PWQ+E + LHT FPPAKRLK+
Sbjct: 340 TYQETGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQ 399
Query: 377 PNYGSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPAGMQGARQNPYSLFSLSNFIS 436
P G ++ + EI +P +GL ++ +PS+ +Y+TFPAGMQGARQ + F+ + FI
Sbjct: 400 PGGGFLSGDDGEILYPQSGLSSAAAPDPSPSMFSYSTFPAGMQGARQYDFGSFNPTGFIG 459
Query: 437 ENNHQMSSDGIFGNNMVPKLRRVSTEL-NIGSSQSDNLSPDSHSSVHSFGTELGGNQGCN 495
N Q+ ++ + +P L +VSTE+ N GS SDNLSP+S+++ S G +L GN+G
Sbjct: 460 GNPPQLFTNNFL--SPLPDLGKVSTEMMNFGSPPSDNLSPNSNTTNLSSGNDLVGNRGPL 517
Query: 496 STKVGVRSIQLFGKIIHMKQPVESGFGDVVCPDDDGSKGFSERE 539
S KV SIQLFGKII +++ ESG + ++DGSK S+ E
Sbjct: 518 SKKVN--SIQLFGKIITVEEHSESGPAESGLCEEDGSKESSDNE 559
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 601 (216.6 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 135/372 (36%), Positives = 204/372 (54%)
Query: 13 RAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSV-----TKPFIP----C 63
+ ++ +W ACAG V +PS SRV YFPQGH EQ + V P +P C
Sbjct: 17 KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76
Query: 64 LITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFA 123
+ +V AD TD+V+A++ L P+T E F+ P L I + + +N F
Sbjct: 77 QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFV-------PIELGIPSKQPSNY--FC 127
Query: 124 KILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPR 183
K LT SD + GGFSVPR A+ +FPPL+Y + PP Q + D+H W+FRHI+RG P+
Sbjct: 128 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPK 187
Query: 184 RHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGM 243
RHLLTTGWS FV+ K+L+AGDSV+F+R+ + ++++G+R + R S+ M
Sbjct: 188 RHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL---SSDSM 244
Query: 244 KXXXXXXXXXXXXLGLPFEVVYYPRAGWADFIVR-AEVVDSAMRVFWTAGMRVKMVVETE 302
F V ++PRA ++F+++ ++ + + + GMR +M+ ETE
Sbjct: 245 HIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETE 304
Query: 303 DSSRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQP 362
+SS ++ GT+T S D W S W ++V WDE + RVS W+IE ++ T P
Sbjct: 305 ESSVRRYM-GTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT-TFP 362
Query: 363 LHTAFPPAKRLK 374
++ + P RLK
Sbjct: 363 MYPSLFPL-RLK 373
Score = 40 (19.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 415 PAGMQGARQNPYSLFSLSNFISENNH 440
PAG Q Q P L+ F +N H
Sbjct: 519 PAGQQQQLQQPDQNAYLNAFKMQNGH 544
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 593 (213.8 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 141/396 (35%), Positives = 207/396 (52%)
Query: 5 QPYS-PAEPRAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSVTK--PFI 61
QP+ E R ++ +W ACAG V +P V SRV YFPQGH EQ S V P
Sbjct: 11 QPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNY 70
Query: 62 P-------CLITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNV 114
P C + +V AD TD+V+A++ L P+ A E +L P L + +
Sbjct: 71 PSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYL-------PAELGVPSR 123
Query: 115 EENNVVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEF 174
+ N F K LT SD + GGFSVPR A+ +FPPL+Y PP Q + D+H W+F
Sbjct: 124 QPTNY--FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKF 181
Query: 175 RHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAG 234
RHI+RG P+RHLLTTGWS FV+ K+L+AGDSV+F+ + + ++ +G+RR+ R S+
Sbjct: 182 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSV 241
Query: 235 ARWREQTGMKXXXXXXXXXXXXLGLPFEVVYYPRAGWADFIVR-AEVVDSAMRVFWTAGM 293
M F + Y PRA ++F++ A+ V + + GM
Sbjct: 242 L---SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGM 298
Query: 294 RVKMVVETEDSSRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQ 353
R +M+ ETE+SS ++ GT+T D W S W ++V WDE + RVS W+
Sbjct: 299 RFRMLFETEESSVRRYM-GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWE 357
Query: 354 IEFVSPTQPLHTA-FPPAKRLKFSPNYGSMTDVEEE 388
IE ++ T P++ + FP + + P S ++E+
Sbjct: 358 IEPLT-TFPMYPSPFPLRLKRPWPPGLPSFHGLKED 392
Score = 57 (25.1 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 33/156 (21%), Positives = 69/156 (44%)
Query: 367 FPPAKRLKFSPNYGSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPAGMQGARQNPY 426
FP + GS +D + F VN + +S++ L P+ ++ N G++G
Sbjct: 698 FPGGRECSIEQE-GSASDPHSHLLFGVN-IDSSSL--LMPNGMS-NLRSIGIEGGDSTTL 752
Query: 427 SLFSLSNFISENNHQMSSDGIFGNNMVPKLRRVSTELNIGSSQ-SDNLSPDSHSSVHSFG 485
F+ SNF ++ + ++ ++ + + + + N+GS N + S SFG
Sbjct: 753 P-FTSSNFNNDFSGNLAMTT--PSSCIDESGFLQSSENLGSENPQSNTFVKVYKS-GSFG 808
Query: 486 TELGGNQGCNSTKVGVRSIQLFGKIIHMKQPVESGF 521
L ++ + ++ ++FG ++ PV SG+
Sbjct: 809 RSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGW 844
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 604 (217.7 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 146/384 (38%), Positives = 197/384 (51%)
Query: 11 EPRAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSV----TKPFIP---- 62
E + ++ ++W ACAG V +P V S V YFPQGH EQ S+ P +P
Sbjct: 16 EKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLI 75
Query: 63 CLITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAF 122
CL+ V AD TD+V+A++ L P+ + R L GL + N + F
Sbjct: 76 CLLHSVTLHADTETDEVYAQMTLQPVNKYD--REALLASD----MGLKL-NRQPTEF--F 126
Query: 123 AKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTP 182
K LT SD + GGFSVPR A+ IFPPL++ + PP Q I D+H W FRHIYRG P
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQP 186
Query: 183 RRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTG 242
+RHLLTTGWS FV+ K+L AGDSV+F+RD + ++ +G+RR+ R S+
Sbjct: 187 KRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVI---SSDS 243
Query: 243 MKXXXXXXXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETE 302
M PF + + PRA ++F+V + A+ + GMR +M+ ETE
Sbjct: 244 MHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETE 303
Query: 303 DSSRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQP 362
D ++ GTVT S D W GS W L+V WDE RVS W+IE V P
Sbjct: 304 DCGVRRYM-GTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV--ITP 360
Query: 363 LHTAFPPAKRLKFSPNYGSMTDVE 386
+ PP R K+ P M D E
Sbjct: 361 FYICPPPFFRPKY-PRQPGMPDDE 383
Score = 43 (20.2 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 28/131 (21%), Positives = 49/131 (37%)
Query: 369 PAKRLKF-SPNYGSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPAGMQGARQNPYS 427
P+K L F SPN S + VN + P+++ Q Q+
Sbjct: 454 PSKLLNFQSPNLSSANSQFNKPN-TVNHISQQMQA--QPAMVKSQQQQQQQQQQHQHQQQ 510
Query: 428 LFSLSNFISENNHQMSSDGIFGNNMVPKLRRVSTEL-N--IGSSQSD----NLSPD---- 476
+ + Q+ GI+ N + +VS + N G SQS ++ P
Sbjct: 511 QLQQQQQLQMSQQQVQQQGIYNNGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGAKM 570
Query: 477 SHSSVHSFGTE 487
+H +++S G +
Sbjct: 571 THQNINSMGNK 581
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 575 (207.5 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 136/365 (37%), Positives = 194/365 (53%)
Query: 19 IWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSV--TKPFIPCLITHVEFLADPVT 76
+W ACAG + +P S V YFPQGH+EQ+ P + ++ P + C I V+ A+ T
Sbjct: 55 LWHACAGPLISLPKRGSLVLYFPQGHLEQA-PDFSAAIYGLPPHVFCRILDVKLHAETTT 113
Query: 77 DQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVV-AFAKILTPSDANNGG 135
D+V+A+V L P + + R E + ++ +N F K LT SD + G
Sbjct: 114 DEVYAQVSLLPESE-DIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHG 172
Query: 136 GFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTTGWSKFV 195
GFSVPR A+ FPPL+Y P Q + D+HG W FRHIYRG PRRHLLTTGWS FV
Sbjct: 173 GFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFV 232
Query: 196 NRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSA-GARWREQTGMKXXXXXXXXXX 254
N+KKL++GD+V+F+R GK+ +G+RR+ + G +A A++ + M
Sbjct: 233 NKKKLVSGDAVLFLRGDDGKLRLGVRRASQI--EGTAALSAQYNQN--MNHNNFSEVAHA 288
Query: 255 XXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTWIQGTV 314
F + Y P+A W++FI+ A + + GMR K VE+ED+S G +
Sbjct: 289 ISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERR-SPGII 347
Query: 315 TAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIE---FVSPTQPLHTAFPPAK 371
+ S D W GS W L V WD+ + +RVSPW+IE +S + T P
Sbjct: 348 SGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRS 407
Query: 372 RLKFS 376
R+ FS
Sbjct: 408 RIGFS 412
Score = 37 (18.1 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 485 GTELGGNQGCNSTKVGVRSIQLFGKIIHMKQ 515
GTE G + G + G ++ + H +Q
Sbjct: 466 GTEFGDSYGFHKVLQGQETVPAYSITDHRQQ 496
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 577 (208.2 bits), Expect = 1.9e-55, P = 1.9e-55
Identities = 154/453 (33%), Positives = 223/453 (49%)
Query: 15 VDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSVTK-----PFIP----CLI 65
++ +W ACAG V +P V S VYYF QGH EQ S S T P +P C +
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 66 THVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKI 125
+V AD +D+++A++ L P+ + R+ RG ++ F K
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHS---ERDVFPVPDFGMLRG------SKHPTEFFCKT 161
Query: 126 LTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRH 185
LT SD + GGFSVPR A+ +FPPL+Y PP Q + V D+H W FRHIYRG P+RH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 221
Query: 186 LLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKX 245
LLTTGWS FV K+L AGDSV+F+RD + ++ +G+RR+ R S+ M
Sbjct: 222 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVL---SADSMHI 278
Query: 246 XXXXXXXXXXXLGLPFEVVYYPRAGWADFIVR-AEVVDSAMRVFWTAGMRVKMVVETEDS 304
PF + Y PRA A+F++ A+ + + GMR M+ ETEDS
Sbjct: 279 GVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDS 338
Query: 305 SRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLH 364
+ ++ GT+ S D W GS W L+V WDEP RVSPW IE
Sbjct: 339 GKRRYM-GTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFP 397
Query: 365 TAFPPAKRLKFSPNY-GSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPA----GMQ 419
+ KR + P+Y T+ I P+ + +S G ++ Y +FP+ +
Sbjct: 398 SLTSGLKR-QLHPSYFAGETEWGSLIKRPLIRVPDSANG-----IMPYASFPSMASEQLM 451
Query: 420 GARQNPYSLFSLSNFISE--NNHQMSSDGIFGN 450
P++ ++ +F+SE N M + G+ G+
Sbjct: 452 KMMMRPHNNQNVPSFMSEMQQNIVMGNGGLLGD 484
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 134/368 (36%), Positives = 187/368 (50%)
Query: 19 IWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSIT--LSVTKP-F-IP----CLITHVEF 70
+W ACAG V +P RVYYFP+GH+EQ S+ L P F +P C + +++
Sbjct: 23 LWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQR 82
Query: 71 LADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPSD 130
A+P TD+V+A++ L P E L+Q + P + E+ V +F K LT SD
Sbjct: 83 RAEPETDEVYAQITLLP----E-----LDQSEPTSPDA-PVQEPEKCTVHSFCKTLTASD 132
Query: 131 ANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTTG 190
+ GGFSV R AD PPL+ PP Q + TD+H + W FRHI+RG PRRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTG 192
Query: 191 WSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXXX 250
WS FV+ KKL+AGD+ +F+R ++ +G+RR +R N S+ M
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVI---SSHSMHIGVLAT 249
Query: 251 XXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTWI 310
G F V Y PR ++FIV A + GMR KM E E++ +
Sbjct: 250 AAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRF- 308
Query: 311 QGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIE-FVSPTQPLHTAFPP 369
GT+ W S W L+V WDEP + +RVSPW++E V+ + P PP
Sbjct: 309 SGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPP 368
Query: 370 AKRLKFSP 377
+ + P
Sbjct: 369 QRNKRPRP 376
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 542 (195.9 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
Identities = 133/393 (33%), Positives = 192/393 (48%)
Query: 3 SQQPYSPAEPRAVDPR------IWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSV 56
S S A RA+DP +W ACAG V +P + RV+YFPQGH+EQ S +
Sbjct: 40 SNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 99
Query: 57 TK--PF--IP----CLITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRG 108
+ P +P C + +V+ A+ TD+V+A++ L P N +E++ P
Sbjct: 100 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP--EANQDENAIEKEAPLPPP- 156
Query: 109 LSIGNVEENNVVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIH 168
V +F K LT SD + GGFSV R AD PPL+ PP Q + D+H
Sbjct: 157 ------PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLH 210
Query: 169 GAVWEFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGN 228
W FRHI+RG PRRHLL +GWS FV+ K+L+AGD+ +F+R G++ +G+RR++R
Sbjct: 211 ANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 270
Query: 229 NGDSAGARWREQTGMKXXXXXXXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVF 288
N S+ M G F V Y PR ++FIV + +++
Sbjct: 271 NVPSSVI---SSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 327
Query: 289 WTAGMRVKMVVETEDSSRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKR 348
++ GMR KM E E++ + GT+ D W S W L+V WDE + R
Sbjct: 328 YSIGMRFKMRFEGEEAPEQRFT-GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDR 386
Query: 349 VSPWQIE--FVSPT-QPLHTAFPPAKRLKFSPN 378
VSPW++E P P+ P R +P+
Sbjct: 387 VSPWKVEPALAPPALSPVPMPRPKRPRSNIAPS 419
Score = 38 (18.4 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 550 TYTELLNRFG 559
TYT+LL+ FG
Sbjct: 507 TYTDLLSGFG 516
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 549 (198.3 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 155/453 (34%), Positives = 220/453 (48%)
Query: 3 SQQPYSPAEPRAVDPRIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCP---SITLSVTK- 58
S S ++ +W ACAG +P + V YFPQGH+EQ S L + K
Sbjct: 50 SSSSSSTGSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKF 109
Query: 59 ---PFIPCLITHVEFLADPVTDQVFAKVVLNPITALE----PSRNFLEQQQEQQPRGLSI 111
P I C + +V+ LA+ TD+V+ +V L P+ + E E++ G S
Sbjct: 110 DLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSS- 168
Query: 112 GNVEENNVVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAV 171
+V+ + F K LT SD + GGFSVPR A+ F PL+Y+ P Q + D+HG
Sbjct: 169 -SVKRTPHM-FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVE 226
Query: 172 WEFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNN-G 230
W+FRHIYRG PRRHLLTTGWS FV++K L++GD+V+F+RD G++ +G+RR+ R N
Sbjct: 227 WKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLP 286
Query: 231 DSAGARWREQTGMKXXXXXXXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWT 290
DS E+ + F V Y PRA A+F++ E +++R
Sbjct: 287 DSI----IEKNSCSNILSLVANAVSTKSM-FHVFYSPRATHAEFVIPYEKYITSIRSPVC 341
Query: 291 AGMRVKMVVETEDSSRMTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVS 350
G R +M E +DS G VT D W S W L V WDE + + +RVS
Sbjct: 342 IGTRFRMRFEMDDSPERR-CAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVS 400
Query: 351 PWQIE-FVS-PTQPLHTAFPPAKR-----LKFSP------NYGSMTDVEEEIFFPVNGL- 396
PW+I+ VS P + ++ P KR L +P G D EE + P L
Sbjct: 401 PWEIDPSVSLPHLSIQSS-PRPKRPWAGLLDTTPPGNPITKRGGFLDFEESVR-PSKVLQ 458
Query: 397 GNSTVGCLNPS----LLNYNTFPAGMQGARQNP 425
G +G +PS ++N MQ + NP
Sbjct: 459 GQENIGSASPSQGFDVMNRRILDFAMQ-SHANP 490
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 130/352 (36%), Positives = 183/352 (51%)
Query: 19 IWRACAGSSVQIPSVNSRVYYFPQGHVEQ---SCPSITLSVTKPF--IP----CLITHVE 69
+W+ CAG V +P RVYYFPQGH+EQ S + L+ KP +P C + +V
Sbjct: 13 LWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVS 72
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
A+ TD+V+A++ L P+ E +++ P S ++ V +F+K+LT S
Sbjct: 73 LQAEKDTDEVYAQITLIPV-GTE-----VDEPMSPDP---SPPELQRPKVHSFSKVLTAS 123
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + GGFSV R A PPL+ P Q + D+HG W+F+HI+RG PRRHLLTT
Sbjct: 124 DTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTT 183
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRS-VRYGNNGDSAGARWREQTGMKXXXX 248
GWS FV K+L+AGD+ VF+R G++ +G+RR+ ++ + S + G+
Sbjct: 184 GWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATAR 243
Query: 249 XXXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMT 308
F V Y PR + FI+ AM ++ GMR KM E EDS
Sbjct: 244 HATQTKTM----FIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 297
Query: 309 WIQGTVTAASMPDRGP-WCGSPWGMLEVTWDEPEILQNAKRVSPWQIE-FVS 358
+ GTV D P W S W LEV WDEP + +VSPW+IE FV+
Sbjct: 298 Y-SGTVIGVK--DCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVN 346
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 151/482 (31%), Positives = 222/482 (46%)
Query: 19 IWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSVTKPFIP---------CLITHVE 69
+W+ACAG V++P RV+YFPQGH+EQ S V IP C + V
Sbjct: 43 LWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVT 102
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVE--ENNVVAFAKILT 127
A+ TD+V+A++ L P ++ + +P L VE + V +F KILT
Sbjct: 103 LKAEHETDEVYAQITLQP------------EEDQSEPTSLDPPLVEPAKPTVDSFVKILT 150
Query: 128 PSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLL 187
SD + GGFSV R A P L+ P Q + D+HG W F+HI+RG PRRHLL
Sbjct: 151 ASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLL 210
Query: 188 TTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXX 247
TTGWS FV K+L+AGD+ VF+R G + +G+RR + + + A M+
Sbjct: 211 TTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQS---TMPASVISSQSMRLGV 267
Query: 248 XXXXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRM 307
F V Y PR + FI+ AM+ ++ GMR +M E E+S
Sbjct: 268 LATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPER 325
Query: 308 TWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLHTAF 367
+ GT+ + W S W L++ WDEP +Q +VSPW+IE SP+ T
Sbjct: 326 IFT-GTIIGSGDLS-SQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 383
Query: 368 PPAKRLKFSPNYGSMTDVEEEIFFPVNGLGNSTVGCLNPSLLNYNTFPAGMQGARQNPYS 427
+ K S +T F ++ S NPS+ PA + + ++ +S
Sbjct: 384 QQQSKSKRSRPISEITGSPVASSF-LSSFSQSHES--NPSVKLLFQDPATERNSNKSVFS 440
Query: 428 LFSLSNFISENNHQMSSDGIFGNNMVPK---------LRRVSTELNIGSSQSDNLSPDSH 478
L I+E SS +FG ++ K + +S + NI S + P+S
Sbjct: 441 S-GLQCKITEAP-VTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSS 498
Query: 479 SS 480
+S
Sbjct: 499 NS 500
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 125/371 (33%), Positives = 180/371 (48%)
Query: 19 IWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSITLSVTKPFIP---------CLITHVE 69
+W+ CAG V++P RV+YFPQGH+EQ S + IP C + V
Sbjct: 26 LWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDVT 85
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLS---IGNVEENNVVAFAKIL 126
A+ TD+V+A++ L P ++ + +P L +G ++ +F KIL
Sbjct: 86 LKAEHETDEVYAQITLQP------------EEDQSEPTSLDPPIVGPTKQE-FHSFVKIL 132
Query: 127 TPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHL 186
T SD + GGFSV R A P L+ P Q + D+HG W F+HI+RG PRRHL
Sbjct: 133 TASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHL 192
Query: 187 LTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXX 246
LTTGWS FV+ K+L+AGD+ VF+R G + +G+RR R+ + ++ M
Sbjct: 193 LTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVI---SSQSMHLG 249
Query: 247 XXXXXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSR 306
F V Y PR + FIV A++ ++ G R +M E E+S
Sbjct: 250 VLATASHAVRTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPE 307
Query: 307 MTWIQGTVTAASMPDRGPWCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLHT- 365
+ GT+ + W S W L+V WDEP +Q +VSPW+IE T P+ T
Sbjct: 308 RIFT-GTIVGSGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTP 365
Query: 366 AFPPAKRLKFS 376
A P + K S
Sbjct: 366 AQQPQSKCKRS 376
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 134/417 (32%), Positives = 200/417 (47%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVE--QSCPSITLSVTKPF--IP----CLITHVE 69
++W+ CAG IP + VYYFPQG++E Q+ L+ +P +P C + +
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
+ +D+++A++ L P T ++ + Q E + R L V +F K+LT S
Sbjct: 87 LKVENNSDEIYAEITLMPDT----TQVVIPTQSENRFRPL---------VNSFTKVLTAS 133
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + GGFSVP+ A PPL+ P Q I D+H W FRH YRGTP+RH LTT
Sbjct: 134 DTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTT 193
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXX 249
GW++F+ KKL+ GD +VF+R G++ +G+RR+ N S+ M+
Sbjct: 194 GWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV---SIDCMRHGVIA 250
Query: 250 XXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTW 309
F VVY PR+ + FIV + A+ + G R M E +D S +
Sbjct: 251 SAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRY 308
Query: 310 IQGTVTAASMPDRGP-WCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPL-HTAF 367
GT+ S D P W S W LEV WDE +VSPW+IE + P + ++
Sbjct: 309 F-GTIIGVS--DFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSL 365
Query: 368 PPAKRLKFSPNYGSMTD-VEEEIFFPVNGLGNSTVGC-LNPSLLNYNTFPAGMQGAR 422
KRL+ +GS + + I +G +V +N SL +T A M +R
Sbjct: 366 LKNKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVASPMNISLRYRDTTEAAMNPSR 422
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 119/351 (33%), Positives = 175/351 (49%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVE--QSCPSITLSVTKPF--IP----CLITHVE 69
++W+ CAG IP + ++YYFPQG++E ++ L+ KP +P C + ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQ 86
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
+ +D+ +A++ L P T ++ + Q E Q R L V +F K+LT S
Sbjct: 87 LKVENNSDETYAEITLMPDT----TQVVIPTQNENQFRPL---------VNSFTKVLTAS 133
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + GGF VP+ A PPL+ P Q + TD+HG W F H YRGTP+RHLLTT
Sbjct: 134 DTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTT 191
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXX 249
GW+ F KKL+AGD +VF+R G++ +G+RR+ G+ + + M+
Sbjct: 192 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRA---GHQQGNIPSSIISIESMRHGVIA 248
Query: 250 XXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTW 309
F VVY PR+ + FIV + A+ + G R M E +D S +
Sbjct: 249 SAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRY 306
Query: 310 IQGTVTAASMPDRGP-WCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSP 359
GT+ S D P W S W LEV WDE +VSPW+IE + P
Sbjct: 307 F-GTIIGVS--DFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMP 354
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 126/374 (33%), Positives = 180/374 (48%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVE--QSCPSITLSVTKPF--IP----CLITHVE 69
++W+ CAG IP + +VYYFPQGH+E ++ L+ +P +P C + +
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIH 86
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
+ +D+ +A++ L P T ++ + Q E Q R L V +F K+LT S
Sbjct: 87 LKVENNSDETYAEITLMPDT----TQVVIPTQNENQFRPL---------VNSFTKVLTAS 133
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + GGF VP+ A P L+ P Q + D+HG W F H YRGTP+RHLLTT
Sbjct: 134 DTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTT 193
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXX 249
GW+ F KKL+AGD +VF+R G++ +G+RR+ N S+ M+
Sbjct: 194 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV---SIDCMRHGVVA 250
Query: 250 XXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTW 309
F VVY PR+ + FIV + A+ + G R M +E +D S
Sbjct: 251 SAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRC 308
Query: 310 IQGTVTAASMPDRGP-WCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPLHTAFP 368
GT+ S D P W S W LEV WDE K+VSPW IE + P + +F
Sbjct: 309 F-GTIIGVS--DFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVPRSFL 365
Query: 369 -PAKRLKFSPNYGS 381
KRL+ GS
Sbjct: 366 LKNKRLREVNEIGS 379
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 124/375 (33%), Positives = 182/375 (48%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVE--QSCPSITLSVTKPF------IPCLITHVE 69
++W+ CAG IP + +VYYFPQGH+E ++ L+ +P + C + ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQ 86
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
+ +D+ +A++ L P T ++ + Q + Q R L V +F K+LT S
Sbjct: 87 LKVENNSDETYAEITLMPDT----TQVVIPTQNQNQFRPL---------VNSFTKVLTAS 133
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + GGFSVP+ A PPL+ P Q I D+HG W FRHIYRGT +RHLLT
Sbjct: 134 DTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTI 193
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXX 249
GW+ F KKL+ GD +VF+R G++ +G+RR+ N S+ M+
Sbjct: 194 GWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIES---MRHGIIA 250
Query: 250 XXXXXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETED-SSRMT 308
F VVY PR+ + FIV + + + G R M E +D S R +
Sbjct: 251 SAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRS 308
Query: 309 WIQGTVTAASMPDRGP-WCGSPWGMLEVTWDEPEILQNAKRVSPWQIEFVSPTQPL-HTA 366
+ GT+ S D P W S W LEV WDE +VSPW IE ++P + ++
Sbjct: 309 F--GTIIGVS--DFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSS 364
Query: 367 FPPAKRLKFSPNYGS 381
F KR + GS
Sbjct: 365 FLKNKRSREVNEIGS 379
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 149/528 (28%), Positives = 235/528 (44%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVEQSCPSIT--LSVTKPF--IPCLITHVEFLAD 73
++W+ CAG IP + VYYFPQG++E S L+ +P +P + +A
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKL-QCRVIAI 85
Query: 74 PVTDQVFAKVVLNPITAL-EPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPSDAN 132
+ + + IT + + ++ + Q E Q R L V +F K+LT SD +
Sbjct: 86 HLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL---------VNSFTKVLTASDTS 136
Query: 133 NGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTTGWS 192
GGF VP+ A PPL P Q + D+HG W FRH YRGTP+RH LTTGW+
Sbjct: 137 AYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWN 192
Query: 193 KFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYGNNGDSAGARWREQTGMKXXXXXXXX 252
+F KKL+ GD +VF+R G++ +G+RR+ N S+ M+
Sbjct: 193 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV---SIDCMRHGVIASAK 249
Query: 253 XXXXLGLPFEVVYYPRAGWADFIVRAEVVDSAMRVFWTAGMRVKMVVETEDSSRMTWIQG 312
F VVY P + FIV + AM + G R M E +D S + G
Sbjct: 250 HALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYF-G 308
Query: 313 TVTAASMPDRGP-WCGSPWGMLEVTWDEPEILQNAKRVSPWQIE-FVSPTQPLHTAFPPA 370
T+ + D P W S W LEV WDE +VSPW+IE +S ++
Sbjct: 309 TIIGVN--DFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSSLLKN 366
Query: 371 KRLKFSPNYGSMTDVEEEIFFPVNG---LGNSTVGCLNPS--LLNYNTFPAGMQGARQNP 425
KRL+ +G + + P+N ++T +NPS L++Y P M N
Sbjct: 367 KRLREVNEFGQEIG-QLSVASPMNTSLRYRDTTEDAMNPSRLLMSYPVQP--MPKLNYNN 423
Query: 426 YSLFSLSNFISENNHQMSSDGIFGNNM-VPKLRRVSTELNIGSSQSD-------NLSPDS 477
+ + I+ +++ +FG ++ +P + + E IGS S S
Sbjct: 424 QMVTQIEENITTK--AVTNFRLFGVSLAIPLVIKDPIE-EIGSDISKLTEGKKFGQSQTL 480
Query: 478 HSSVHSFGTELGGNQGCNSTKVGVRSIQLFGKIIHMKQPVESGFGDVV 525
S + + G + C TKV ++ + + G+ + + V +G+ ++
Sbjct: 481 RSPIEIQSKQFGSTRTC--TKVQMQGVTI-GRAVDLS--VLNGYDQLI 523
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 322 (118.4 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 73/216 (33%), Positives = 112/216 (51%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVE--QSCPSITLSVTKPF--IP----CLITHVE 69
++W CAG +P +VYYFPQGH+E ++ L +P +P C + ++
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAID 84
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
D TD+V+A++ L P T + N ++P V F+KILT S
Sbjct: 85 RKVDKNTDEVYAQISLMPDTTEVMTHN--TTMDTRRPI-----------VYFFSKILTAS 131
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + GG +P+ A FPPL+ QN+ D++G W F+H++RGTP+RH+ T+
Sbjct: 132 DVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTS 191
Query: 190 G--WSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRS 223
G WS F K+LI GD V +R G++ G+RR+
Sbjct: 192 GGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRA 227
Score = 97 (39.2 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 280 VVDSAMRVFWTAGM-----RVKMVVETEDSSRMTWIQGTVTAASMPDRGP-WCGSPWGML 333
V+ S + F T M + +M E +D S + GT+ + D P W S W L
Sbjct: 248 VIASVVNAFKTKCMFNVVYKPRMQFEGKDFSEKRY-DGTIIGVN--DMSPHWKDSEWRSL 304
Query: 334 EVTWDEPEILQNAKRVSPWQIEFVSPTQPL 363
+V WDE +VSPW IE + P+ +
Sbjct: 305 KVQWDELSPFLRPNQVSPWDIEHLIPSSDI 334
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 291 (107.5 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 70/212 (33%), Positives = 108/212 (50%)
Query: 18 RIWRACAGSSVQIPSVNSRVYYFPQGHVE--QSCPSITLSVTKPF--IP----CLITHVE 69
++W+ CAG IP + +VYYFPQGH+E ++ L+ +P +P C + +
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIH 86
Query: 70 FLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQPRGLSIGNVEENNVVAFAKILTPS 129
+ +D+ + ++ L P T ++ + + E Q R + V +F K+LT S
Sbjct: 87 LKVENNSDETYVEITLMPDT----TQVVIPTENENQFRPI---------VNSFTKVLTAS 133
Query: 130 DANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTT 189
D + G FSVP A PPL+ P Q + D+HG W F+H YR PR TT
Sbjct: 134 DTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TT 190
Query: 190 GWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLR 221
GW+ F KKL+ GD +VF R G++ +G+R
Sbjct: 191 GWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 177 (67.4 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 47/138 (34%), Positives = 69/138 (50%)
Query: 99 EQQQEQQPRGLSIGNVEENNVVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPP 158
+QQQ+QQ + VEE + F K LTPSD +P+ A+ FP D
Sbjct: 18 QQQQQQQQHQNDV--VEEKEAL-FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAV 74
Query: 159 VQNISVT--DIHGAVWEFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMR--DSRG 214
+ + + D G W FR+ Y + + ++LT GWS++V K L AGD V+F R G
Sbjct: 75 EKGLLLCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGG 134
Query: 215 KMYIGLRRSVRYGNNGDS 232
+ +IG RR ++ DS
Sbjct: 135 RFFIGWRRRGDSSSSSDS 152
Score = 38 (18.4 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 449 GNNMVPKLRRVSTELNIGSSQSDNLSPDSHSS 480
GN+ +L V+ E + S S+ +PD ++
Sbjct: 178 GNSKTLRLFGVNMECQLDSDWSEPSTPDGSNT 209
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 175 (66.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 98 LEQQQEQQPRGLSIGNVEENNVVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDP 157
+ Q+ +++P + ++E ++ F K++TPSD +P+ A+ FP N +
Sbjct: 1 MNQEDKEKPIEEASSSMEREHM--FDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTND 58
Query: 158 PVQNISVT--DIHGAVWEFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDS--R 213
+ + + D G W FR+ Y + + +++T GWS+FV KKL AGD V F RDS +
Sbjct: 59 SNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNK 118
Query: 214 GKMYIGLRR 222
K+YI RR
Sbjct: 119 DKLYIDWRR 127
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 39/102 (38%), Positives = 56/102 (54%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFP-PL-NYQVDPPVQNISVTDIHGAVWEFRHIYR 179
F K +TPSD +P+ A+ FP PL N V ++ D++G VW FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 180 GTPRRHLLTTGWSKFVNRKKLIAGDSVVFMR--DSRGKMYIG 219
+ + ++LT GWS+FV K+L AGD + F R D K +IG
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIG 284
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 166 (63.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 41/114 (35%), Positives = 62/114 (54%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGT 181
F K +TPSD +P+ A+ FP + V ++ D++G VW FR+ Y +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 182 PRRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGK---MYIGLRRSVRYGNNGDS 232
+ ++LT GWS+FV K L AGD V F R S G+ +YIG + R G++ D+
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSR-SNGQDQQLYIGWKS--RSGSDLDA 298
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGT 181
F K+LTPSD +P+ A++ FP L + V + D +G +W FR+ Y +
Sbjct: 36 FDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQNGTV--LDFQDKNGKMWRFRYSYWNS 92
Query: 182 PRRHLLTTGWSKFVNRKKLIAGDSVVFMR 210
+ +++T GWS+FV KKL AGD+V F R
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 48/155 (30%), Positives = 79/155 (50%)
Query: 88 ITALEPSRNFLEQQQEQQPRGLSIGNVE-ENNVVAFAKILTPSDANNGGGFSVPRFCADS 146
+T L +R+ E ++E +P G E + F K++TPSD +P+ A+
Sbjct: 2 MTDLSLTRD--EDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAER 59
Query: 147 IFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSV 206
FP L+ + ++ D+ G W FR+ Y + + +++T GWS+FV KKL AGD V
Sbjct: 60 FFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIV 118
Query: 207 VFMR---DSR--GKMYIGLRRSVRYGNNGD-SAGA 235
F R DS +++I RR + ++ +AGA
Sbjct: 119 SFQRCVGDSGRDSRLFIDWRRRPKVPDHPHFAAGA 153
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/105 (35%), Positives = 56/105 (53%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVWEFRHIYRGT 181
F K++TPSD +P+ A+ FP L+ + ++ D +G +W FR+ Y +
Sbjct: 56 FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYWNS 114
Query: 182 PRRHLLTTGWSKFVNRKKLIAGDSVVFMR-----DSRGKMYIGLR 221
+ +++T GWS+FV KKL AGD V F R R K+YI R
Sbjct: 115 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWR 159
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/112 (35%), Positives = 57/112 (50%)
Query: 120 VAFAKILTPSDANNGGGFSVPRFCADSIFP-PLNYQVDPPVQN---ISVTDIHGAVWEFR 175
V F K +TPSD +P+ A+ FP P P V I+ D++G VW FR
Sbjct: 186 VLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLP---SPSPAVTKGVLINFEDVNGKVWRFR 242
Query: 176 HIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDSRGKMYIGLRRSVRYG 227
+ Y + + ++LT GWS+FV K L AGD V F R + + + + VR G
Sbjct: 243 YSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSG 294
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 112 GNVEENNVVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAV 171
GN+ N V F K L+ SDA G +P+ CA++ FPP++ P++ + D+ G
Sbjct: 285 GNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLK---IQDVRGRE 341
Query: 172 WEFRHIY--RGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMR-DSRGKMYIGLRRSVRYGN 228
W F+ Y R ++L G + + L AGD+V F R D GK+ +G R++ N
Sbjct: 342 WTFQFRYWPNNNSRMYVLE-GVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAA---N 397
Query: 229 NGDSAG 234
GD G
Sbjct: 398 AGDMQG 403
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 141 (54.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 40/113 (35%), Positives = 55/113 (48%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQN---------ISVTDIHGAVW 172
F K LTPSD +P+ A+ FP V + +S D G W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 173 EFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMR---DSRGKMYIGLRR 222
FR+ Y + + ++LT GWS+FV K+L GD V F R DSR +++IG RR
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSR-RLFIGWRR 157
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 143 (55.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 37/100 (37%), Positives = 53/100 (53%)
Query: 120 VAFAKILTPSDANNGGGFSVPRFCADSIFP-PLNYQ---VDP-PVQN--ISVTDIHGAVW 172
V F K +TPSD +P+ A+ FP P ++P P + I++ D G VW
Sbjct: 193 VLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVW 252
Query: 173 EFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRDS 212
FR+ Y + + ++LT GWS+FV K L AGD V F R +
Sbjct: 253 RFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERST 292
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 46 EQSCPSITLSVTKPFIPCLITHVEFLADPVTDQVFAKVVLNPITALEPSRNFLEQQQEQQ 105
+ S S +LS++ P T + + P T ++ + + S N +E + +
Sbjct: 8 DSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGVETESRKL 67
Query: 106 PRGLSIGNVEENN 118
P G V + N
Sbjct: 68 PSSKYKGVVPQPN 80
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVD----PPVQN------ISVTDIHGAV 171
F K LTPSD +P+ A+ FP N + V +S D G
Sbjct: 29 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKC 88
Query: 172 WEFRHIYRGTPRRHLLTTGWSKFVNRKKLIAGDSVVFMRD--SRGKMYIGLRR 222
W+FR+ Y + + ++LT GWS++V K L AGD V F R +++IG RR
Sbjct: 89 WKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 122 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQVDPPVQNISVTDIHGAVW--EFRHIYR 179
F K+L+ SDA G +P+ CA++ FPP++ P++ + DI G W +FR
Sbjct: 286 FEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLK---IQDIKGKEWVFQFRFWPN 342
Query: 180 GTPRRHLLTTGWSKFVNRKKLIAGDSVVFMR-DSRGKMYIGLRRS 223
R ++L G + + +L AGD+V F R + GK+ +G R++
Sbjct: 343 NNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRTEPEGKLVMGYRKA 386
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 578 566 0.00079 120 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 619 (66 KB)
Total size of DFA: 333 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.55u 0.14s 46.69t Elapsed: 00:00:02
Total cpu time: 46.56u 0.14s 46.70t Elapsed: 00:00:02
Start: Tue May 21 00:36:24 2013 End: Tue May 21 00:36:26 2013