Your job contains 1 sequence.
>008081
MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK
LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ
VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT
SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS
PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT
KLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAEST
FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK
PYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIE
LERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTS
EDQVSHISTHYNDQDSQGLNLPESPFASPIGSGISTVI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008081
(578 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051239 - symbol:AT2G05160 species:3702 "Arabi... 1255 9.8e-146 2
TAIR|locus:2085211 - symbol:AT3G52980 species:3702 "Arabi... 748 1.9e-108 3
TAIR|locus:2083740 - symbol:AT3G51950 species:3702 "Arabi... 392 2.9e-61 3
TAIR|locus:505006612 - symbol:AT5G12440 species:3702 "Ara... 369 1.7e-48 3
TAIR|locus:2092970 - symbol:AT3G21100 species:3702 "Arabi... 389 2.3e-48 2
TAIR|locus:2033882 - symbol:AT1G51520 species:3702 "Arabi... 334 2.3e-40 2
FB|FBgn0036496 - symbol:CG7804 species:7227 "Drosophila m... 115 0.00091 1
>TAIR|locus:2051239 [details] [associations]
symbol:AT2G05160 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00360 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0090305 GO:GO:0004518 EMBL:AC007018
EMBL:AY429380 EMBL:AY429381 IPI:IPI00541993 PIR:E84465
RefSeq:NP_178588.1 UniGene:At.41216 ProteinModelPortal:Q9SJ41
SMR:Q9SJ41 EnsemblPlants:AT2G05160.1 GeneID:815064
KEGG:ath:AT2G05160 TAIR:At2g05160 eggNOG:NOG258283
HOGENOM:HOG000242520 InParanoid:Q9SJ41 OMA:WENSTEM PhylomeDB:Q9SJ41
ProtClustDB:CLSN2912923 Genevestigator:Q9SJ41 InterPro:IPR025605
Pfam:PF12872 PROSITE:PS51644 Uniprot:Q9SJ41
Length = 536
Score = 1255 (446.8 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 266/460 (57%), Positives = 326/460 (70%)
Query: 127 VQPGYSDTAAEDFCLQNQMQFLTLEDQFXXXXXXXXXXXXXXXXPEPALGHVRTSRRSPS 186
++ G+ + + E LQN +QFL ED E +RTSRRSPS
Sbjct: 99 MKTGFWENSTEMDTLQNNLQFLNFEDPLTSPEFSNGFFSQ-----ERQCLPLRTSRRSPS 153
Query: 187 LPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPE--SFSQIFSPNANDIRNEDHVFSPGSL 244
LPEFPVK+CHYFNKGFCKHGNNCRYFHG +PE SF+Q+F+PN N++ +E+HV SP SL
Sbjct: 154 LPEFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPN-NNLSDEEHVVSPVSL 212
Query: 245 ERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLA 304
E+LE EI ELLK RRG PISIASLPMMYYEKYG+TLQAEGYLTESQRHGKAGYSLTKLLA
Sbjct: 213 EKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLA 272
Query: 305 RLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQ 364
RLKN+IRL+DRPHGQHSVILAED K++EY+GE+++ G I+AGSRQIYLTFPAES+FTE
Sbjct: 273 RLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEH 332
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
DVS YF+ +G V+DVRIPCQQKRM+GFVTF +ETVK ILAKGNPHF+C ARVLVKPYRE
Sbjct: 333 DVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYRE 392
Query: 425 KSRLVDRKYVE--KMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELE 482
KSR +Y++ K H M F + D E++T+P + S +RK + E EQ++
Sbjct: 393 KSR--SSRYLDNYKPLHGMRYGSKFIERDIEMNTLPPRVSESSRMRKPFLSEPEQSVS-- 448
Query: 483 RRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGS---- 538
+ L P N+ SY G+S D+ +++ + AEQ + AER +YLLD LN
Sbjct: 449 -KSL--------PTNY-SYLGFSSDDFKLT-SNAEQEE--QAERLSYLLDYLNTEDNVMN 495
Query: 539 -TSEDQVSHISTHYNDQDSQGLNLPESPFASPIGSGISTV 577
T+ + + TH DSQ LNLPESPF+S G ISTV
Sbjct: 496 ITTNYRDNDRRTHCESLDSQVLNLPESPFSSLSGKEISTV 535
Score = 190 (71.9 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 56/152 (36%), Positives = 75/152 (49%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
M+FTES V+ RIQ+LEPEN +KI GYLLL Q++G RDMIRLAF PD ++ S+IN K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 60 KLGLGKPTVSPPISPASVADLPLQFAPFSPASTRXXXXXXXXXXXXXXFWDPQMAADQ-Q 118
+L P P+ P +F F+ +S FW+ D Q
Sbjct: 61 ELARNSHHYHSP--PSDHIPTP-KFGSFTGSSP---LSVSVSPPMKTGFWENSTEMDTLQ 114
Query: 119 QQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTL 150
+ + F P S + F Q + Q L L
Sbjct: 115 NNLQFLNFEDPLTSPEFSNGFFSQER-QCLPL 145
>TAIR|locus:2085211 [details] [associations]
symbol:AT3G52980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009505 "plant-type cell wall" evidence=IDA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0009505 EMBL:AL132969
eggNOG:NOG258283 HOGENOM:HOG000242520 InterPro:IPR025605
Pfam:PF12872 PROSITE:PS51644 IPI:IPI00519582 PIR:T47555
RefSeq:NP_190866.1 UniGene:At.53909 ProteinModelPortal:Q9LF94
SMR:Q9LF94 EnsemblPlants:AT3G52980.1 GeneID:824464
KEGG:ath:AT3G52980 TAIR:At3g52980 InParanoid:Q9LF94 OMA:RYFHGHP
PhylomeDB:Q9LF94 ProtClustDB:CLSN2915555 Genevestigator:Q9LF94
Uniprot:Q9LF94
Length = 381
Score = 748 (268.4 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 145/198 (73%), Positives = 172/198 (86%)
Query: 209 CRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASL 268
C YF+ + F + + N++ +E+HV SPGSLE+LE EI ELLK RRG PISIA L
Sbjct: 170 CHYFN-----KGFCKHGNNCHNNLSDEEHVVSPGSLEKLEREIIELLKSRRGAPISIAFL 224
Query: 269 PMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDV 328
PMMY+EKYG++LQAEGYLTESQRHGKAG+SLTKLLARLKN+IRLIDRPHGQHSVILAEDV
Sbjct: 225 PMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTKLLARLKNTIRLIDRPHGQHSVILAEDV 284
Query: 329 PKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM 388
K++EY+GE+S+ G I+AGSRQ+YLTFPAES+FTE DVSNYFS+ GPV+DVRIPCQQKRM
Sbjct: 285 SKFVEYTGERSEHGAILAGSRQVYLTFPAESSFTEHDVSNYFSEVGPVEDVRIPCQQKRM 344
Query: 389 FGFVTFVFAETVKQILAK 406
+GFVTFV+ ETVK+ILAK
Sbjct: 345 YGFVTFVYMETVKRILAK 362
Score = 188 (71.2 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 39/62 (62%), Positives = 48/62 (77%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
M+FTE+ V+NRI +LEPEN SKIIGYLLL QD +RDMIRLAF PD ++ S+IN K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 60 KL 61
+L
Sbjct: 61 EL 62
Score = 170 (64.9 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 178 VRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNC 209
+RTSRRS SLPEFP+K+CHYFNKGFCKHGNNC
Sbjct: 153 LRTSRRSLSLPEFPLKICHYFNKGFCKHGNNC 184
>TAIR|locus:2083740 [details] [associations]
symbol:AT3G51950 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0090305
EMBL:AL049711 GO:GO:0004518 HOGENOM:HOG000242520 EMBL:AY080846
EMBL:AY150500 EMBL:AK316715 EMBL:AY088484 IPI:IPI00523195
PIR:T49074 RefSeq:NP_001030840.1 RefSeq:NP_190763.1
UniGene:At.43143 ProteinModelPortal:Q9SV09 SMR:Q9SV09 STRING:Q9SV09
PaxDb:Q9SV09 PRIDE:Q9SV09 EnsemblPlants:AT3G51950.1
EnsemblPlants:AT3G51950.2 GeneID:824358 KEGG:ath:AT3G51950
TAIR:At3g51950 eggNOG:NOG276617 InParanoid:Q9SV09 OMA:NQTTERE
PhylomeDB:Q9SV09 ProtClustDB:CLSN2684736 Genevestigator:Q9SV09
Uniprot:Q9SV09
Length = 540
Score = 392 (143.0 bits), Expect = 2.9e-61, Sum P(3) = 2.9e-61
Identities = 99/259 (38%), Positives = 141/259 (54%)
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDV 379
++++ +++ K + E+ D + SRQIYLTFPA+S F E+DVSNYFS FGPVQDV
Sbjct: 229 ALMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDV 288
Query: 380 RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQH 439
RIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ D+ +
Sbjct: 289 RIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTE 348
Query: 440 PMFCSLHFTDGDTELHTMPRACNNSR-LLRKQLMEEHEQAIELERRRLSEMQLAC----- 493
++ NN++ +L + EE + +EL+ RRL +QL
Sbjct: 349 RELSPTGLDSSPRDVLGGRGFYNNTQDVLWRSKFEE--EILELQSRRLMNLQLLDVKKHF 406
Query: 494 ---KPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTH 550
P N HS +S + + ++ E+ ++ S+D ++
Sbjct: 407 QLNSPTNIHSPNPFSQSLISPRPLSVIKREYDGGEKGKG-----SSKEGSDDDTMNLPER 461
Query: 551 YNDQDSQGLNLPESPFASP 569
D +LP+SPFASP
Sbjct: 462 LED------SLPDSPFASP 474
Score = 202 (76.2 bits), Expect = 2.9e-61, Sum P(3) = 2.9e-61
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLGKPTVSP 70
LGL + SP
Sbjct: 61 LGLMNCSRSP 70
Score = 79 (32.9 bits), Expect = 2.9e-61, Sum P(3) = 2.9e-61
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 195 CHYFNKGFCKHGNNCRYFH---GHPMPESFSQIFSPNANDI--RNEDHVFSPGSL 244
C YF +GFCK+G +CR+ H G + S S+I +N + R H + SL
Sbjct: 154 CSYFARGFCKNGASCRFVHSDGGADLVGSPSRIELLRSNSVPPRLAHHFMTRSSL 208
>TAIR|locus:505006612 [details] [associations]
symbol:AT5G12440 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00360 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL592312
HOGENOM:HOG000242520 EMBL:AK119121 EMBL:BT002509 IPI:IPI00534948
RefSeq:NP_001190296.1 RefSeq:NP_001190297.1 RefSeq:NP_568277.5
UniGene:At.32141 ProteinModelPortal:Q94CJ8 SMR:Q94CJ8 PRIDE:Q94CJ8
EnsemblPlants:AT5G12440.1 EnsemblPlants:AT5G12440.2
EnsemblPlants:AT5G12440.3 GeneID:831119 KEGG:ath:AT5G12440
TAIR:At5g12440 eggNOG:NOG243110 OMA:YERREMM ProtClustDB:CLSN2927451
Genevestigator:Q94CJ8 Uniprot:Q94CJ8
Length = 650
Score = 369 (135.0 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 84/193 (43%), Positives = 116/193 (60%)
Query: 346 AGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILA 405
+ SRQIYLTFPA+STF ++DV+ YFS FG VQDVRIP QQKRMFGFV+F ETVK +LA
Sbjct: 354 SASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLA 413
Query: 406 KGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPM----FCSLHFTDG-----DTELHT 456
+GNPHF+C +RVLVKPY+EK +++D+K + +Q + + G ++ H
Sbjct: 414 RGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHL 473
Query: 457 MPRACNNSRLLRKQLMEEHE--QAIELERRRLSEMQLA----CKPMNHHSYFGYSMDELQ 510
+ R + ++ +E+ + +AIELERRR +QL +NHH F
Sbjct: 474 GSKMLYERREMMRRKIEQADLLRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSPGY- 532
Query: 511 VSEAPAEQGDFPS 523
S A + DF S
Sbjct: 533 FSSAGNQSPDFQS 545
Score = 149 (57.5 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD ++T + +I+ LEP+ KIIGYLLL D G+RD++ LA P+ ++ S I++ K
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGLGKPTVSPPISPASVADL-PLQFAPFS 88
LG+ SP +P S + L P+ P +
Sbjct: 61 LGIFSNN-SPSSTPTSPSPLNPICRPPLN 88
Score = 82 (33.9 bits), Expect = 1.7e-48, Sum P(3) = 1.7e-48
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHG-HPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEI 251
K C YF++G CK+G +C++ HG +P + I + + + N V + RL+
Sbjct: 231 KPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMEN--FVRQHEEMMRLKLAY 288
Query: 252 TELLKQRRGFPISIASLPMMYYEK 275
+ QR I + P + YEK
Sbjct: 289 QQ---QRLASQI-LGRAPQLPYEK 308
Score = 41 (19.5 bits), Expect = 4.8e-45, Sum P(4) = 4.8e-45
Identities = 18/62 (29%), Positives = 25/62 (40%)
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
G + R SPS P FN C +GNN H P S+ FS + ++ +
Sbjct: 97 GFMDFRRNSPSSPSSTSPWS--FNN--CINGNNGNNPHISPKHTPISKPFSSHQSNGLSA 152
Query: 236 DH 237
H
Sbjct: 153 TH 154
Score = 38 (18.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 449 DGDTELHTMPRACNNS 464
DG+T LH +C+ S
Sbjct: 203 DGETHLHRRSFSCDAS 218
Score = 37 (18.1 bits), Expect = 4.8e-45, Sum P(4) = 4.8e-45
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 240 SPGSLERLE 248
SPG LER+E
Sbjct: 335 SPGRLERME 343
>TAIR|locus:2092970 [details] [associations]
symbol:AT3G21100 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00541186 RefSeq:NP_001030738.1 UniGene:At.48687
ProteinModelPortal:F4IWD6 SMR:F4IWD6 PRIDE:F4IWD6
EnsemblPlants:AT3G21100.2 GeneID:821662 KEGG:ath:AT3G21100
OMA:HERDEFM Uniprot:F4IWD6
Length = 602
Score = 389 (142.0 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 82/168 (48%), Positives = 117/168 (69%)
Query: 336 GEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
G+KS+ + S+QIYLTFPA+S+FT++DVSNYF FGPVQDVRIP QQKRMFGFVTF+
Sbjct: 310 GDKSN-----SASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFL 364
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT--- 452
+ETV+ ILA+GNPHF+C +RVLVKPY+EK R+++++ +++ M +F+ G +
Sbjct: 365 HSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERG-NFSPGSSPSG 423
Query: 453 -------ELHTMPRACNNSR--LLRKQLMEEHEQAIELERRRLSEMQL 491
+ H PR +N++ + RK + +QAIE +RRR +QL
Sbjct: 424 MDSRDLFDSHLAPRMFSNTQEMMRRKAEQADLQQAIEFQRRRFLSLQL 471
Score = 164 (62.8 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++ +I+ LEP+ SKIIGYLLLQD G+ D++RLA P+ L+ S+ +AK
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGL---GKPTVSPPISPAS 76
LGL G + S P++P S
Sbjct: 61 LGLSSNGSSSASSPLNPIS 79
Score = 57 (25.1 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 465 RLLRKQLMEEHEQAIELERRRLS-EMQLACKP-MNHHSYFGYSMDELQVSEAPAEQGDFP 522
R L QL + ++ +R LS + P +N F +V E + G
Sbjct: 465 RFLSLQLPDMDSESFLHHQRSLSIGSPVHFSPRVNQSMLFRSESTSDEVFEGNGDSGHQS 524
Query: 523 SAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGSG 573
A R +L D +N S SH++ + S LP+S FASP +G
Sbjct: 525 EATRA-FLSDTGHNISQERGYNSHLNK--GQETSLENTLPDSFFASPSKTG 572
Score = 41 (19.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 423 REKSRLVDRKYVEKMQHPMFCSLHFTDGDTE--LH 455
R K+ D + + Q F SL D D+E LH
Sbjct: 447 RRKAEQADLQQAIEFQRRRFLSLQLPDMDSESFLH 481
>TAIR|locus:2033882 [details] [associations]
symbol:AT1G51520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00546547 RefSeq:NP_849792.1 UniGene:At.37800
ProteinModelPortal:F4I9J8 SMR:F4I9J8 PRIDE:F4I9J8
EnsemblPlants:AT1G51520.2 GeneID:841577 KEGG:ath:AT1G51520
OMA:GRHERED PhylomeDB:F4I9J8 Uniprot:F4I9J8
Length = 513
Score = 334 (122.6 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 85/236 (36%), Positives = 136/236 (57%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
S+QIYLTFP+ES+FT++DVS YF FG V DVRIP QQ+RM+GFVTF AETV+ ILA+G
Sbjct: 265 SKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARG 324
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLL 467
NPHF+C +RVLVKPY+EK +++ ++ +++ H + +++ + R RL
Sbjct: 325 NPHFICDSRVLVKPYKEKGKILQKRQQQQL-HELLERGNYSPSSSPSGKDSRELYECRLG 383
Query: 468 RKQLMEEHEQAIELERRRLSEMQLACK-------PMNHHSYFGYSMDELQVSEAPAE--Q 518
+ ++ ++ + + + +++Q A + P + F +S+ Q E +
Sbjct: 384 PRMFSKKTQEMLRRKTEQ-ADLQHAIERSPSIGSPSHFPPRFNHSL-LFQSGNNNEEIME 441
Query: 519 GDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGLN-LPESPFASPIGSG 573
GD +E+ D L +TS ++ + + Y Q++ N LP+S F SP SG
Sbjct: 442 GDSDRSEK-----D-LQQVATSNEERGYNNGFYKGQETSLENTLPDSLFGSPKKSG 491
Score = 154 (59.3 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++++I+ E EN S++I Y LLQD +RD+IR+AF PD LI + +AK+
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLGKPTVSPPIS 73
LG S PI+
Sbjct: 61 LGFSSNGFSRPIN 73
>FB|FBgn0036496 [details] [associations]
symbol:CG7804 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014296 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P09651 eggNOG:NOG145464
GeneTree:ENSGT00570000079202 EMBL:AY118452 RefSeq:NP_648764.1
UniGene:Dm.13628 SMR:Q9VUN2 EnsemblMetazoa:FBtr0075617
EnsemblMetazoa:FBtr0332815 GeneID:39665 KEGG:dme:Dmel_CG7804
UCSC:CG7804-RA FlyBase:FBgn0036496 InParanoid:Q9VUN2 OMA:EPKHNNS
OrthoDB:EOG43XSK6 GenomeRNAi:39665 NextBio:814765 Uniprot:Q9VUN2
Length = 318
Score = 115 (45.5 bits), Expect = 0.00091, P = 0.00091
Identities = 59/243 (24%), Positives = 98/243 (40%)
Query: 227 PNANDIRNEDHVF-SPGSLERLEAEIT--ELLKQRRGFPISIASLPMMYYEKYGKTLQAE 283
P N ++ED++ S +R EA + +L+ + + L Y+E YG ++AE
Sbjct: 79 PKKNKRQSEDNLENSTAKTKRTEAHLRCFDLIVLGLSYNTTEQDL-REYFETYGDVVKAE 137
Query: 284 GYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGG 343
H K G+ + + ++ + H VP + +PG
Sbjct: 138 IKKDTRSGHSK-GFGFVRF-GSYDVQMHVLSKRHSIDGRWCEVKVPASRGMGNQ--EPGK 193
Query: 344 IVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQI 403
+ G T E+ D+ YFSKFG V DV IP + R F FVTF+
Sbjct: 194 VFVGR----CTEDIEA----DDLREYFSKFGEVIDVFIP-KPFRAFSFVTFLDPYV---- 240
Query: 404 LAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNN 463
P VCG + ++K D+K V+ ++ +F + ++ + D P NN
Sbjct: 241 -----PRVVCGEKHIIKGVSVHVSTADKKNVQN-KNQLFQTNNYNNLDNNFKMQP--ANN 292
Query: 464 SRL 466
R+
Sbjct: 293 FRM 295
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 578 548 0.00096 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 614 (65 KB)
Total size of DFA: 307 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.19u 0.15s 48.34t Elapsed: 00:00:03
Total cpu time: 48.19u 0.15s 48.34t Elapsed: 00:00:03
Start: Tue May 21 00:52:28 2013 End: Tue May 21 00:52:31 2013