BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008081
(578 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255587629|ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative [Ricinus communis]
Length = 578
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/583 (76%), Positives = 500/583 (85%), Gaps = 10/583 (1%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDFTESTK VYNRIQKLEPENVSKIIGYLLLQDH ER+MIRLAFSPD+LIYSLI +AK
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 61 LGLGKPTVSPPISPASV-----ADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAA 115
LGL KP +S PISP+ V +D+PLQF PFSPAS P+SSPA+ R AS +WD Q+
Sbjct: 61 LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVTG 120
Query: 116 DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL 175
DQQQ V +++F PGYSDT ED+ LQN MQFLTL+DQF+ +SVNSDFSS+YFY EPAL
Sbjct: 121 DQQQ-VPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPAL 179
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
G RT+RRSPSLPEFP+K+CHYF+KG+CKHGNNCRY HGHPMPE FSQIFS +ND N+
Sbjct: 180 G-PRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSND 238
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
+HV SPGSLE+LE E+ ELLK RRG P+SIASLPMMYYEKYGKTLQAEGYLTESQRHGKA
Sbjct: 239 EHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 298
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
GYSLTKLLARLKNSIR+IDRPHGQHSVIL EDVPKYLEY GE++DPGGIVAGSRQIYLTF
Sbjct: 299 GYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYLTF 358
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
PAES FTE DVS YFSKFGPVQDVRIPCQQKRMFGFVTF+F ETVKQILAKGNPH+VCGA
Sbjct: 359 PAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGA 418
Query: 416 RVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEH 475
RVLVKPYREKSRL+DRK+ EK+QHPM+ S HF DGD+ELH MP +NSRLLRKQLMEE+
Sbjct: 419 RVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRKQLMEEN 478
Query: 476 EQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLN 535
E A+E ERRRL E L K +NH SY G SMDEL++SE E +FPSAERFNYLLDVLN
Sbjct: 479 EHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSE---EHAEFPSAERFNYLLDVLN 535
Query: 536 NGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGSGISTVI 578
NGS+SE + IST+YNDQDSQG+NLPESPFASPI SGISTV+
Sbjct: 536 NGSSSEGKFRRISTNYNDQDSQGINLPESPFASPIRSGISTVM 578
>gi|224129150|ref|XP_002320513.1| predicted protein [Populus trichocarpa]
gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/584 (74%), Positives = 484/584 (82%), Gaps = 36/584 (6%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+ESTK VYNRIQ++EPE V KIIGY+LLQ+HGER+MIRLAFSPD+LIY+ I++AK
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 61 LGLGKPTVSPPISP-----ASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAA 115
LGL K V PISP A V+D+ LQF P + S+ P+SSP +R A S FWD Q+
Sbjct: 61 LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGS-FWDAQVT- 118
Query: 116 DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL 175
D+ LQNQMQFLT +DQ + VNS DFSSSYFYPEPAL
Sbjct: 119 ----------------------DYRLQNQMQFLTSDDQLEFVNS---DFSSSYFYPEPAL 153
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
G RTSRRSPSLPEFPVK+CHYFNKGFCKHGNNCRYFHGHPMPESFSQI S N+N+I N+
Sbjct: 154 G-PRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIAND 212
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
+H SPGSLE+LE E+TELLK RRG P+SIASLPMMYYEKYG+ LQAEGYLTESQRHGKA
Sbjct: 213 EHFISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKA 272
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
GYSLTKLLARLKNSIRLIDRPHGQHSVIL EDVPKYLEY+GE++DPGGIVAGSRQIYLTF
Sbjct: 273 GYSLTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTF 332
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQIL+KGNPH VCGA
Sbjct: 333 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGA 392
Query: 416 RVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEH 475
RVLVKPYREKSRLVDRKY EK+QHP F S HF DGD+ELH++PR C+NSRLLRKQLMEEH
Sbjct: 393 RVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEEH 452
Query: 476 EQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLN 535
EQA+ELERRRLSE QLA KP+ H+Y G+SMDE ++SE A+Q FPSAE FNY DVLN
Sbjct: 453 EQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSEEQADQ--FPSAEHFNYWFDVLN 510
Query: 536 NGSTSEDQVSHISTHYNDQDS-QGLNLPESPFASPIGSGISTVI 578
NGSTSE++ H T+ ++QDS QG+NLPESPFAS IG GISTVI
Sbjct: 511 NGSTSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGISTVI 554
>gi|225447594|ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/589 (73%), Positives = 486/589 (82%), Gaps = 30/589 (5%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+ESTK VYNRIQKLEPENVSKIIGYLLLQDHGERDMIR AF+ D+ I LIN+AK +
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 61 LGLG-KPTVSPPISP-----ASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMA 114
LGL KP VS PISP + V+DLPLQF PFSPAS RP SP + +WDPQ+
Sbjct: 61 LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSPR----PGNSYWDPQVN 116
Query: 115 ADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPA 174
DQQQ +FV GYSD+ +DF LQ+Q+ FL +EDQ + NSV S+FS SY+Y E A
Sbjct: 117 GDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYYYAEQA 174
Query: 175 LGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 234
L + R SRRSPSLPEFP+KVCHYFNKGFCKHGN+CRYFHGHPM ESFSQIFSP AN++ N
Sbjct: 175 L-NTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPN 233
Query: 235 EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
+DHVF PGSLE+LE E+TELLK RRG P+SIASLPMMYYEKYG+TLQAEGYLTESQRHGK
Sbjct: 234 DDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGK 293
Query: 295 AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLT 354
AGYSLTKLLARLKNSIRLIDRPHGQHSVILAED+PKY+E +GE+SDPG IV S+QIYLT
Sbjct: 294 AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLT 353
Query: 355 FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
FPA+STFTEQDVSNYF+KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQIL KGNPH++CG
Sbjct: 354 FPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICG 413
Query: 415 ARVLVKPYREK--SRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRK-QL 471
ARVLVKPYREK SR VDR+ QHPM+ S HF D D+EL ++PR C+NSRLLRK QL
Sbjct: 414 ARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQL 468
Query: 472 MEEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQ--VSEAPAEQGDFPSAERFNY 529
MEEHEQA+ELERRRLSE+QL P H YFGYSMDE + A AEQ +FPSAER NY
Sbjct: 469 MEEHEQALELERRRLSELQLT--PKTAHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNY 526
Query: 530 LLDVLNNGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGSGISTV 577
LL+VLNNGSTSED+ ST+YN+Q+ SQGLNLPESPFASPI + ISTV
Sbjct: 527 LLEVLNNGSTSEDR----STNYNEQESSQGLNLPESPFASPIRNSISTV 571
>gi|296084999|emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/584 (68%), Positives = 446/584 (76%), Gaps = 80/584 (13%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+ESTK VYNRIQKLEPENVSKIIGYLLLQDHGERDMIR AF+ D+ I LIN+AK +
Sbjct: 14 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 73
Query: 61 LGLG-KPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQ 119
LGL KP VS +P SP P P M+
Sbjct: 74 LGLSSKPAVS---------------SPISPPQVNP---------------SPSMS----- 98
Query: 120 QVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVR 179
Q+ FL +EDQ + NSV S+FS SY+Y E AL + R
Sbjct: 99 ------------------------QIHFLAMEDQLE--NSVGSEFSGSYYYAEQAL-NTR 131
Query: 180 TSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVF 239
SRRSPSLPEFP+KVCHYFNKGFCKHGN+CRYFHGHPM ESFSQIFSP AN++ N+DHVF
Sbjct: 132 ISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVF 191
Query: 240 SPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSL 299
PGSLE+LE E+TELLK RRG P+SIASLPMMYYEKYG+TLQAEGYLTESQRHGKAGYSL
Sbjct: 192 PPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSL 251
Query: 300 TKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAES 359
TKLLARLKNSIRLIDRPHGQHSVILAED+PKY+E +GE+SDPG IV S+QIYLTFPA+S
Sbjct: 252 TKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADS 311
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
TFTEQDVSNYF+KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQIL KGNPH++CGARVLV
Sbjct: 312 TFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLV 371
Query: 420 KPYREK--SRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRK-QLMEEHE 476
KPYREK SR VDR+ QHPM+ S HF D D+EL ++PR C+NSRLLRK QLMEEHE
Sbjct: 372 KPYREKASSRTVDRR-----QHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHE 426
Query: 477 QAIELERRRLSEMQLACKPMNHHSYFGYSMDELQ--VSEAPAEQGDFPSAERFNYLLDVL 534
QA+ELERRRLSE+QL P H YFGYSMDE + A AEQ +FPSAER NYLL+VL
Sbjct: 427 QALELERRRLSELQLT--PKTAHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVL 484
Query: 535 NNGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGSGISTV 577
NNGSTSED+ ST+YN+Q+ SQGLNLPESPFASPI + ISTV
Sbjct: 485 NNGSTSEDR----STNYNEQESSQGLNLPESPFASPIRNSISTV 524
>gi|255576322|ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein, putative [Ricinus communis]
Length = 551
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 351/587 (59%), Positives = 430/587 (73%), Gaps = 45/587 (7%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+E T+ V+N+I+K+EPENV+KIIGYLLLQD +++MI LA SPD +I +I +AK +
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60
Query: 61 LG-LGKPTVSPPISPA-----SVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMA 114
L L + + P+SP+ +V++ QF FSP S+R SP R S +W+ Q+A
Sbjct: 61 LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVP-STYWESQVA 119
Query: 115 ADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPA 174
+ +S +FV Y D+ E LQNQ QFL+LEDQ +SVN N+ F S FY + A
Sbjct: 120 SK-----HSSDFVPMTYQDSMTE---LQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAA 171
Query: 175 LG--HVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDI 232
LG R RR SL E +K+CHYFNKG+CKHG+NCRYFHG + +SF + F D
Sbjct: 172 LGSFRARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQ-ISDSFPRTF-----DA 225
Query: 233 RNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRH 292
NED +FSPGSLE+LE EI ELLK R+G P+SIASLPM+YYEKYGK LQA+GYLTESQRH
Sbjct: 226 INEDQIFSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRH 285
Query: 293 GKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIY 352
GKAGYSLTKLLARLKNSIRLIDRPHGQH+VILAEDVPKY+E G+++DPG IV+GSRQIY
Sbjct: 286 GKAGYSLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPGPIVSGSRQIY 345
Query: 353 LTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFV 412
LTFPAESTFTE DVSNYF+KFGPV+DVRIPCQQKRMFGFVTF A+TVK ILAKGNPHFV
Sbjct: 346 LTFPAESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFV 405
Query: 413 CGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLM 472
C ARVLVKPYRE L+ + S H+ D D ELH+M R SRLLRKQL+
Sbjct: 406 CNARVLVKPYRENQSLL-----------XYFSSHYVDMDAELHSMSRGYETSRLLRKQLL 454
Query: 473 EEHEQAIELERR-RLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLL 531
EE EQA+ELERR RL+E+++ KP++HHSYF Y MD +VSE + + P ++L
Sbjct: 455 EEQEQALELERRQRLAELRIR-KPVSHHSYFDYPMDGFKVSE---DNFELPY-----HVL 505
Query: 532 DVLNNGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGSGISTVI 578
D + NGS ++D++ HI T+Y DQDSQGLNLPESPFAS I S IST+I
Sbjct: 506 DFI-NGSGNDDKIRHIETNYADQDSQGLNLPESPFASAIPSSISTII 551
>gi|225460759|ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
gi|297737542|emb|CBI26743.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 338/581 (58%), Positives = 406/581 (69%), Gaps = 41/581 (7%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+EST V+NRIQKLEPENVSKIIGYLL++ + +MIRLAF PD I +I K++
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL + + F P SP++ W +
Sbjct: 61 LGLIP---------NPPSPISPHFPPLSPSTGS---------------W---FPSSSPSP 93
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGH--V 178
VN ++Q ++ +D+ LQ+Q L LE+Q + VN S Y+YPE A+ + V
Sbjct: 94 VN--RYLQHA-TEQLPKDYSLQSQP--LGLEEQLEQVNPAILGVSGDYYYPETAVENLSV 148
Query: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
RT RS EFPVKVCHYFNKGFCKHGNNCRY H PE + SP AND+ N+DH+
Sbjct: 149 RTGPRSLIGSEFPVKVCHYFNKGFCKHGNNCRYLHAQVFPE----VLSPIANDLANDDHI 204
Query: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYS 298
FSPGS+E+LE E+TELLK RRG P+SIASLPMMYYE+YG+ LQAEGYLTESQRHGKAGYS
Sbjct: 205 FSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGYS 264
Query: 299 LTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAE 358
LTKLLARL+ +IRLIDRPHGQHSVILAEDVPKY+E E+SDPG IV+GSRQIYLTFPAE
Sbjct: 265 LTKLLARLR-TIRLIDRPHGQHSVILAEDVPKYMESRSERSDPGPIVSGSRQIYLTFPAE 323
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
STFTE+DVS+YFS FG V+DVRIPCQQKRMFGFVTF ++TVK ILAKG+PH+VCGARVL
Sbjct: 324 STFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVL 383
Query: 419 VKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHE-- 476
VKPYREK R DRKY+EK + M+ L + D D+ELH MPR SRLLRKQ+MEE E
Sbjct: 384 VKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIMEEQEFA 443
Query: 477 QAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNN 536
Q +E E RRLS++QLA P+ + + GYS+DEL+V EA A FP+ NY LDV NN
Sbjct: 444 QDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAHANHSKFPTVVHSNYPLDVSNN 503
Query: 537 GSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGSGISTV 577
GSTS+D+ + D S GL LP+SPFA PIGS IST+
Sbjct: 504 GSTSDDKPWRAVNNPIDHKSSGLELPDSPFAFPIGSSISTI 544
>gi|224068839|ref|XP_002302838.1| predicted protein [Populus trichocarpa]
gi|222844564|gb|EEE82111.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 303/436 (69%), Positives = 339/436 (77%), Gaps = 50/436 (11%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+ESTK VYNRIQ +EPE V KIIGY+L+Q+HGER+MIRLAFSPD+LIY++I +AK
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60
Query: 61 LGLGKPTV----SPP-ISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAA 115
LGL K V SP ++P+ V+D+P QF P S S+ P+ SP +R A
Sbjct: 61 LGLNKIPVLNLISPSQVNPSPVSDVPQQFIPNSTVSSHPIFSPVKVRTA----------- 109
Query: 116 DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL 175
GYS+ ED+ +QNQMQFL L+D + VNSDFSSSY YPEPAL
Sbjct: 110 --------------GYSEMVPEDYRIQNQMQFLALDD---PIEFVNSDFSSSYIYPEPAL 152
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
RTSRRSPSLPEFPVK+CHYF KGFCKHGNNC S N N+I NE
Sbjct: 153 SP-RTSRRSPSLPEFPVKICHYFIKGFCKHGNNC----------------SSNLNEIANE 195
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
+ V SPGS E+LE E+TELLK RRG P+SIASLPMMYYE YG+TLQAEGYLTESQRHGKA
Sbjct: 196 EFVVSPGSFEKLELELTELLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKA 255
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
GYSLTKLLARLKNSIRLIDRPHGQHSVILAED PKYLEY+GE++DPGGIVAGSRQIYLTF
Sbjct: 256 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDFPKYLEYAGERNDPGGIVAGSRQIYLTF 315
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
PAESTFTEQDVSNYFS FGPVQDVRIPCQQKRMFGFVTFVFAETVK+ILAKGNPH +CGA
Sbjct: 316 PAESTFTEQDVSNYFSNFGPVQDVRIPCQQKRMFGFVTFVFAETVKKILAKGNPHHICGA 375
Query: 416 RVLVKPYREKSRLVDR 431
RVLVKPYREKSRL+DR
Sbjct: 376 RVLVKPYREKSRLIDR 391
>gi|15224480|ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
gi|75337298|sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18;
Short=AtC3H18
gi|4755187|gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana]
gi|330250805|gb|AEC05899.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
Length = 536
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 324/591 (54%), Positives = 399/591 (67%), Gaps = 70/591 (11%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
M+FTES V+ RIQ+LEPEN +KI GYLLL Q++G RDMIRLAF PD ++ S+IN K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 60 KLGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQ 119
+L P P+ P +F F+ +S VS M+ FW+
Sbjct: 61 ELARNSHHYHSP--PSDHIPTP-KFGSFTGSSPLSVSVSPPMKTG---FWE--------- 105
Query: 120 QVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVR 179
NS E DT LQN +QFL ED S +FS+ +F E +R
Sbjct: 106 --NSTEM------DT------LQNNLQFLNFEDPLTS-----PEFSNGFFSQERQCLPLR 146
Query: 180 TSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPE--SFSQIFSPNANDIRNEDH 237
TSRRSPSLPEFPVK+CHYFNKGFCKHGNNCRYFHG +PE SF+Q+F+PN N++ +E+H
Sbjct: 147 TSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPN-NNLSDEEH 205
Query: 238 VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGY 297
V SP SLE+LE EI ELLK RRG PISIASLPMMYYEKYG+TLQAEGYLTESQRHGKAGY
Sbjct: 206 VVSPVSLEKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGY 265
Query: 298 SLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPA 357
SLTKLLARLKN+IRL+DRPHGQHSVILAED K++EY+GE+++ G I+AGSRQIYLTFPA
Sbjct: 266 SLTKLLARLKNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPA 325
Query: 358 ESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
ES+FTE DVS YF+ +G V+DVRIPCQQKRM+GFVTF +ETVK ILAKGNPHF+C ARV
Sbjct: 326 ESSFTEHDVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARV 385
Query: 418 LVKPYREKSRLVDRKYVEKMQ--HPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEH 475
LVKPYREKSR +Y++ + H M F + D E++T+P + S +RK + E
Sbjct: 386 LVKPYREKSR--SSRYLDNYKPLHGMRYGSKFIERDIEMNTLPPRVSESSRMRKPFLSEP 443
Query: 476 EQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLN 535
EQ++ P N +SY G+S D+ +++ + AEQ + AER +YLLD LN
Sbjct: 444 EQSVS-----------KSLPTN-YSYLGFSSDDFKLT-SNAEQEE--QAERLSYLLDYLN 488
Query: 536 NGSTSEDQVSHISTHYNDQ---------DSQGLNLPESPFASPIGSGISTV 577
+ED V +I+T+Y D DSQ LNLPESPF+S G ISTV
Sbjct: 489 ----TEDNVMNITTNYRDNDRRTHCESLDSQVLNLPESPFSSLSGKEISTV 535
>gi|147832355|emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
Length = 556
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 321/572 (56%), Positives = 385/572 (67%), Gaps = 66/572 (11%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MDF+EST V+NRIQKLEPENVSKIIGYLL++ + +MIRLAF PD I +I K++
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL + + F P SP++ W +
Sbjct: 61 LGLIP---------NPPSPISPHFPPLSPSTGS---------------W---FPSSSPSP 93
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGH--V 178
VN ++Q ++ +D+ LQ+Q L LE+Q + VN S Y+YPE A+ + V
Sbjct: 94 VN--RYLQHA-TEQLPKDYSLQSQP--LGLEEQLEQVNPAILGVSGDYYYPETAVENLSV 148
Query: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
RT RS EFPVKVCHYFNKGFCKHGNNCRY H PE + SP AND+ N+DH+
Sbjct: 149 RTGPRSLIGSEFPVKVCHYFNKGFCKHGNNCRYLHAQVFPE----VLSPIANDLANDDHI 204
Query: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYS 298
FSPGS+E+LE E+TELLK RRG P+SIASLPMMYYE+YG+ LQAEGYLTESQRHGKAGYS
Sbjct: 205 FSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGYS 264
Query: 299 LTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAE 358
LTKLLARL+ +IRLIDRPHGQHSVILAEDVPKY+E E+SDPG IV+GSRQIYLTFPAE
Sbjct: 265 LTKLLARLR-TIRLIDRPHGQHSVILAEDVPKYMESRSERSDPGPIVSGSRQIYLTFPAE 323
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
STFTE+DVS+YFS FG V+DVRIPCQQKRMFGFVTF ++TVK ILAKG+PH+VCGARVL
Sbjct: 324 STFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVL 383
Query: 419 VKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHE-- 476
VKPYREK R DRKY EK + M+ L + D D+ELH MPR SRLLRKQ+MEE E
Sbjct: 384 VKPYREKPRTGDRKYSEKFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIMEEQEFA 443
Query: 477 QAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAP--------------------- 515
Q +E E RRLS++QLA P+ + + GYS+DEL+V EA
Sbjct: 444 QDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAIIPSFWNCSLSSDLTLFLGLVQ 503
Query: 516 ----AEQGDFPSAERFNYLLDVLNNGSTSEDQ 543
A FP+ NY LDV NNGSTS+D+
Sbjct: 504 TIAHANHSKFPTVVHSNYPLDVSNNGSTSDDK 535
>gi|356527124|ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 555
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 292/585 (49%), Positives = 393/585 (67%), Gaps = 37/585 (6%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E T+ V++++ + EPEN +KIIGYLLLQDHGE+DM++LA PDHLI + +A+ +
Sbjct: 1 MDISEYTRIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTE 60
Query: 61 LG-LGKPTVSPPIS-PASVADLPLQFAPFSPAST---RPVSSPASMRAAASPFWDPQMAA 115
L L + PIS P + + SP S ++SPAS + SP+WDPQ A+
Sbjct: 61 LQRLASRSAIQPISLPTNSQQCLSHLSVISPTSVITPGTLTSPASFQVQ-SPYWDPQSAS 119
Query: 116 DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL 175
+ + EF+ GY D+ +E LQ Q +LE+ D++NS + ++ Y+ + +
Sbjct: 120 N-----TNAEFMALGYVDSISE---LQKQTPLFSLENHMDTMNSGTAGIANDYYGLDASS 171
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
+ EFPVK CHYFNKGFCKHGN+CRY+H P+ FS ++ NDI N+
Sbjct: 172 ASNLGGKNGRF--EFPVKTCHYFNKGFCKHGNSCRYYHEQGAPDMFSHMY---GNDIFND 226
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
D V SPGSL +LE+EI ELLK ++G ISIASLPM YY++Y K LQA+GYLTESQRHGK+
Sbjct: 227 DQVISPGSLAQLESEIVELLKLKKGGSISIASLPMAYYDRYKKVLQADGYLTESQRHGKS 286
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
GYSLTKLLARLKNSIRLIDRPHGQHSV+LAED PK+ K D ++ SRQIYLTF
Sbjct: 287 GYSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPKF----NGKVDYAKYISASRQIYLTF 342
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
PA+STF+E DVSNYFS FG V+DVRIP Q++RMFGFVTF ETVK IL KGNPH+VC +
Sbjct: 343 PADSTFSEGDVSNYFSTFGKVEDVRIPSQERRMFGFVTFDDPETVKVILDKGNPHYVCES 402
Query: 416 RVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEH 475
RVLVKPY+EK +L+ RK ++++H + S H+ D DTE ++PR+C R LR+QL+ +
Sbjct: 403 RVLVKPYKEKPKLMLRKNSDRIEHSAYYSPHYVDIDTEPTSIPRSCRKPRFLRRQLINQQ 462
Query: 476 EQ-AIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVL 534
E+ A+E +R+R +E+QLA K ++ + G++MD L+VS+ E + SAE ++
Sbjct: 463 EEAALEFQRQRFAELQLAQKSLSTSPHLGFNMDGLKVSD---EHFNVQSAEPHSH----- 514
Query: 535 NNGSTSEDQVSHISTHYNDQDS-QGLNLPESPFASPIGSGISTVI 578
D + +Y D+DS QGLNLP+SPFA P+ SGIS V+
Sbjct: 515 ----APNDIAGYTDNNYTDEDSNQGLNLPDSPFAFPVDSGISAVM 555
>gi|297835822|ref|XP_002885793.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331633|gb|EFH62052.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 318/593 (53%), Positives = 385/593 (64%), Gaps = 85/593 (14%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
M+FTES V+NRIQ+LEPEN SKIIGYLLL QD+G RDMIRLAF PD ++ S+IN K
Sbjct: 1 MNFTESMNVVHNRIQQLEPENASKIIGYLLLMQDNGNRDMIRLAFCPDSVMRSVINCVKY 60
Query: 60 KLGLGKPTVSPPISPASVADLPL-QFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQ 118
+L P S +P +F F+ +S VS ++ FW+
Sbjct: 61 ELAKNAHHYHSPPSD----HIPTHKFGSFTGSSPLSVSVSPPVKTG---FWE-------- 105
Query: 119 QQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHV 178
NS E DT LQN +QFL ED S +FS+ +F + +
Sbjct: 106 ---NSTEM------DT------LQNNLQFLNFEDSLTS-----PEFSNGFFSQDRQCLPL 145
Query: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMP--ESFSQIFSPNANDIRNED 236
RTSRRSPSLPEFPVK+CHYFNKGFCKHGNNCRYFHG +P ESF+ +F+PN N++ E+
Sbjct: 146 RTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFALMFNPN-NNLSEEE 204
Query: 237 HVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAG 296
HV SP SLE+LE EI ELLK RRG PISIASLPMMY E YG+TLQAEGYLTESQRHGKAG
Sbjct: 205 HVVSPVSLEKLEGEIIELLKARRGAPISIASLPMMYSETYGRTLQAEGYLTESQRHGKAG 264
Query: 297 YSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFP 356
YSLTKLLARLKN+IRLIDRPHGQHSVILAED K++EY+GE+++ G I+AGSRQIYLTFP
Sbjct: 265 YSLTKLLARLKNTIRLIDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFP 324
Query: 357 AESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
AES+FTE DVS P D+ MFGFVTF ETVK ILAKGNPHF+CGAR
Sbjct: 325 AESSFTEHDVSTTL----PHSDI--------MFGFVTFACTETVKLILAKGNPHFICGAR 372
Query: 417 VLVKPYREKSRLVDRKYVE--KMQHPMFCSLHFTDGDTELHTM-PRACNNSRLLRKQLME 473
VLVKPYREKSR +Y++ K H M F D D E++ + PR +SRLLRK +
Sbjct: 373 VLVKPYREKSR--SSRYLDNNKPLHGMRYGSQFIDRDLEINALPPRGSESSRLLRKPFLS 430
Query: 474 EHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDV 533
E EQ++ P N +SY G+S D+ +++ + AEQ + AER +YLLD
Sbjct: 431 EPEQSVS-----------KSLPTN-YSYLGFSSDDFKLT-SNAEQEE--QAERLSYLLDY 475
Query: 534 LNNGSTSEDQVSHISTHYNDQ---------DSQGLNLPESPFASPIGSGISTV 577
LN +ED V +I+T+Y D DSQ LNLP+SPF+S G ISTV
Sbjct: 476 LN----TEDNVMNITTNYRDNDRRTHCESLDSQVLNLPDSPFSSLSGKEISTV 524
>gi|356569657|ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 552
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 285/585 (48%), Positives = 391/585 (66%), Gaps = 44/585 (7%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E T+ V++++Q+ EPE+ +KIIGYLLLQDHGE++M++LA PDHLI + +A+ +
Sbjct: 1 MDISEYTRIVFDKLQRFEPEHTTKIIGYLLLQDHGEQEMVKLASLPDHLIRGVAYKARTE 60
Query: 61 LG--LGKPTVSP---PISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAA 115
L + + P PI+ + +P S + +SPAS + SP+WDPQ A+
Sbjct: 61 LQRLAARSAIQPISLPINSQQCLNHLSVISPTSVITPGTPTSPASFQVQ-SPYWDPQSAS 119
Query: 116 DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPA- 174
+ + EF+ GY D+ +E Q Q +L++ D++NS + ++ Y+ + +
Sbjct: 120 N-----TNAEFMALGYLDSISE---FQKQTPLFSLDNHMDTMNSGTAGIANDYYGLDASS 171
Query: 175 ---LGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNAND 231
LG + RR EFPVK CHYFNKGFCKHGN+CRY+H H +P+ FS ++ ND
Sbjct: 172 VSNLGG-KNGRRF----EFPVKTCHYFNKGFCKHGNSCRYYHEHGVPDMFSHMY---GND 223
Query: 232 IRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQR 291
N+D V SPGSL +LE+EI ELLK ++G ISIASLPM YYE+Y K LQAEGYLTESQR
Sbjct: 224 TFNDDPVISPGSLAQLESEIVELLKLKKGGSISIASLPMAYYERYKKVLQAEGYLTESQR 283
Query: 292 HGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQI 351
HGK+GYSLTKLLARLKNSIRLIDRPHGQHSV+LAED PK+ K D G ++ SRQI
Sbjct: 284 HGKSGYSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPKF----NGKVDYGKYISASRQI 339
Query: 352 YLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHF 411
YLTFPA+STF+E DVS YFS FG V+DVRIP Q++RMFGFVT ETVK IL KGNPH+
Sbjct: 340 YLTFPADSTFSEGDVSYYFSTFGKVEDVRIPSQERRMFGFVTLNDPETVKVILDKGNPHY 399
Query: 412 VCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQL 471
VC +RVLVKPY+EK + + RK+ ++++H + S H+ D DTE ++PR+ N R LR+ L
Sbjct: 400 VCESRVLVKPYKEKPKFMPRKHSDRIEHSAYYSPHYVDIDTEPTSIPRSFRNPRFLRRLL 459
Query: 472 MEEHEQ-AIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYL 530
+E+ E+ A E +RRR +E+Q+A K ++ + G++ D +VS+ E + SAE ++
Sbjct: 460 IEKQEEAAFEFQRRRFAELQMAQKSLSTSPHLGFNTDGFKVSD---EHFNVQSAESHSHA 516
Query: 531 LDVLNNGSTSEDQVSHISTHYNDQDS-QGLNLPESPFASPIGSGI 574
L+ D+ + + D+DS QGLNLP+SPFA P+ SG
Sbjct: 517 LN---------DKAGYTDNNCTDEDSNQGLNLPDSPFAFPVDSGF 552
>gi|356552675|ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 547
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/582 (49%), Positives = 393/582 (67%), Gaps = 54/582 (9%)
Query: 7 TKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLG--LG 64
T V+++IQK EPEN KIIGYL Q HGE++M +LA PD+ I + +A+ +L
Sbjct: 6 TSIVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKELQRLAA 65
Query: 65 KP---TVSPPISPA-SVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
KP +S ++P ++DL + +P +P S P P+WDPQ A +
Sbjct: 66 KPDMLAMSLTVNPQHGLSDLSV-ISPRTPTSPNFQVPP--------PYWDPQSAGN---- 112
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHV-- 178
VN +F+ Y D+ E LQ Q Q LTLE+Q D+V + ++ Y+ + + ++
Sbjct: 113 VNP-DFMGMNYLDSIVE---LQKQTQMLTLENQIDAVKTGTGGIANDYYGLDASAANLGG 168
Query: 179 RTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV 238
+ RR EFP+K+CHYFNKGFCKHG +CR++HG +PE+FSQ++ ND +ED V
Sbjct: 169 KAGRR---FSEFPMKICHYFNKGFCKHGTSCRFYHGQVVPENFSQMY---GNDAISEDQV 222
Query: 239 FSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYS 298
SPGSL +LE+EI ELL+ + G P+SIASLPM YY+KY K LQA+GYLTESQRHGK+GYS
Sbjct: 223 ISPGSLAQLESEIIELLRTKGG-PMSIASLPMAYYDKYKKVLQADGYLTESQRHGKSGYS 281
Query: 299 LTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAE 358
LTKLLARL NSIRLI RPHGQHSV+LAED P ++ K D ++ SRQIYLTFPA+
Sbjct: 282 LTKLLARLNNSIRLIGRPHGQHSVVLAEDAPTQMQ----KGDFARNISASRQIYLTFPAD 337
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
STFTE DVSNYF+ FGPV DVRIP QQ+RMFGFVTFV +ETVK +L KGNPH V G+RVL
Sbjct: 338 STFTEDDVSNYFNTFGPVADVRIPNQQRRMFGFVTFVHSETVKTVLDKGNPHCVRGSRVL 397
Query: 419 VKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRK--QLMEEHE 476
VKPY+EK+++ +RKY ++++HP+ S H+ D DTEL+++PR+ N R +R+ QL+EE E
Sbjct: 398 VKPYQEKAKVNERKYTDRIEHPVCYSPHYVDIDTELNSIPRSFGNHRSIRRQLQLIEEEE 457
Query: 477 Q--AIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDF-PSAERFNYLLDV 533
Q ++EL++R L+++ A K +FG+SMDE ++S+ + +F P+ E F++ L
Sbjct: 458 QGRSLELKKRSLAQLPFAQKYFFSSPHFGFSMDESRISD---DHFNFQPAEESFSFPLHA 514
Query: 534 LNNGSTSEDQVSHISTHYNDQDS-QGLNLPESPFASPIGSGI 574
+ H ++Y+D+DS QGLNLP+SPFA P+ SG+
Sbjct: 515 ---------KSRHTDSNYSDEDSNQGLNLPDSPFAFPLDSGM 547
>gi|357494859|ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355519053|gb|AET00677.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 547
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/578 (50%), Positives = 378/578 (65%), Gaps = 43/578 (7%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E T+ V+++IQK EPEN KIIGYLLLQD+GE++M RLA PDH+I ++ +A
Sbjct: 1 MDISEYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKALQM 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + + PI P +V P Q PA + SSP + + +S +WDPQ ++
Sbjct: 61 LAVNSTMM--PIPPPNVN--PQQGLSHFPALS--PSSPLNFQVPSS-YWDPQSTSNANP- 112
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNS-----VNSDFSSSYFYPEPAL 175
EF Y D+ E LQ Q Q L+LE+ D VN+ V +++++
Sbjct: 113 ----EFTGMNYMDSLVE---LQKQTQLLSLENHLDHVNTGTRGLVVNEYNNGLDSSAVNF 165
Query: 176 GHVRTSRRS-PSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 234
G T R S S+ EFP+K+CHYF+KG+C+HG NCRYFHG ESFS + N N N
Sbjct: 166 GGKATKRFSNSSMSEFPLKICHYFSKGYCRHGGNCRYFHGQVPHESFSHMHGNNDN-TSN 224
Query: 235 EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
ED V SPGSL ++E+EI ELLKQRRG P+SIASLPM YY+KY K LQA GYLTESQRHGK
Sbjct: 225 EDPVISPGSLAQIESEIIELLKQRRGNPMSIASLPMAYYDKYKKVLQAHGYLTESQRHGK 284
Query: 295 AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLT 354
+GYSLTKLLARL NSIRLIDRPHGQH+V+LAED PKY++ K D ++ SRQIYLT
Sbjct: 285 SGYSLTKLLARL-NSIRLIDRPHGQHAVVLAEDAPKYIQ----KGDSVQNISASRQIYLT 339
Query: 355 FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
FPA+STFTE+DV+ YF+ FG V+DVRIPCQQKRMFGFVTF ETV+ IL KGNPH+V G
Sbjct: 340 FPADSTFTEEDVAEYFNAFGYVEDVRIPCQQKRMFGFVTFADPETVRMILDKGNPHYVRG 399
Query: 415 ARVLVKPYREKSRLVDR--KYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLM 472
+RVLVKPYREK+++V+R + P + H T L+++PR+ N R L +QLM
Sbjct: 400 SRVLVKPYREKTKVVERIESWFVGSYDP---TSHGTSIVLRLYSVPRSYGNHRSLSRQLM 456
Query: 473 EEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLD 532
EE EQA EL+RRRL+++Q +P +FG+ MD L+V P + +F + E N+
Sbjct: 457 EEQEQAFELQRRRLAQLQFTRRPFPISPHFGFPMDALRV---PDDHFNFQAVEPLNH--- 510
Query: 533 VLNNGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPI 570
LNN + + D S ++GLNLP+SPFA P+
Sbjct: 511 ALNNNTKNTDTDSS-----GGNSNEGLNLPDSPFAFPM 543
>gi|356499429|ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 541
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 274/570 (48%), Positives = 379/570 (66%), Gaps = 42/570 (7%)
Query: 7 TKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLGLGKP 66
T+ V+ +IQK EPE+ KIIGYL Q HGE++M +LA PD+ I ++ +AK +L +
Sbjct: 6 TRIVFEKIQKFEPEHARKIIGYLFFQGHGEQEMAKLASCPDYFICEVVVQAKKELQ--RL 63
Query: 67 TVSPPISPASVADLPLQ-FAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQVNSIE 125
P + P S P Q + S S R +SP P+WDPQ AA+ +N +
Sbjct: 64 AAKPDMLPISRTVNPQQGLSDLSVISPRTPTSPNFQ--MPPPYWDPQSAAN----INP-D 116
Query: 126 FVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSP 185
F+ Y D+ E LQ Q Q LTLE+Q D+V + ++ ++ + + ++ R S
Sbjct: 117 FMGMNYLDSIVE---LQKQTQMLTLENQIDAVKTGTGGIANDHYGLDASAANLGGRRFS- 172
Query: 186 SLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLE 245
EFP+K+CHYFNKGFCKHG +CR++HG +PE+FSQ+ +AND ED V SPGSL
Sbjct: 173 ---EFPMKMCHYFNKGFCKHGTSCRFYHGQVVPENFSQM---HANDAIGEDQVISPGSLA 226
Query: 246 RLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLAR 305
+LE+EI ELL+ + G P+SIASLPM YY+KY K LQA+GYLTESQRHGK+GYSLTKLLAR
Sbjct: 227 QLESEIIELLRAKGG-PMSIASLPMAYYDKYKKVLQADGYLTESQRHGKSGYSLTKLLAR 285
Query: 306 LKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
LKNSI+LI RPHGQHSV+LAED P ++ K D ++ S QIYLTFPA+STFTE D
Sbjct: 286 LKNSIQLIGRPHGQHSVVLAEDSPTQMQ----KGDFARNISASYQIYLTFPADSTFTEDD 341
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
VSNYF+ FGPV DVRIP QQ+RMFGFVTFV +ETVK +L KGNPH V G+RVLVKPYREK
Sbjct: 342 VSNYFNTFGPVADVRIPNQQRRMFGFVTFVHSETVKSVLDKGNPHCVRGSRVLVKPYREK 401
Query: 426 SRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQ---LMEEHEQAIELE 482
+++ +RKY ++++HP+ S H+ D D EL+++PR+ + +R+ + +E ++
Sbjct: 402 AKVNERKYTDRIEHPICYSPHYVDMDAELNSIPRSFGSHGSIRRHLQLIEQEEQEQALER 461
Query: 483 RRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDF-PSAERFNYLLDVLNNGSTSE 541
+R L+++ A K +FG+SMDE ++S+ + +F P+ E F++ L V
Sbjct: 462 QRSLAQLHFAQKSFFSSPHFGFSMDESRISD---DHFNFQPAEESFSFPLHV-------- 510
Query: 542 DQVSHISTHYNDQDS-QGLNLPESPFASPI 570
+ H ++Y+D+DS +GLNLP+SPFA P+
Sbjct: 511 -KSRHTDSNYSDEDSNEGLNLPDSPFAFPL 539
>gi|357459965|ref|XP_003600264.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355489312|gb|AES70515.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 539
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/586 (45%), Positives = 377/586 (64%), Gaps = 65/586 (11%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E T+ V ++IQ+ EPE+ +KIIGYLL+QD+GE+++ +LA PD+LI + +A+ +
Sbjct: 11 MDISECTRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTE 70
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L K IS + SSPAS + SP+++
Sbjct: 71 LQ--KMATRSVISSGN-------------------SSPASFQVH-SPYYN--------HG 100
Query: 121 VNSIEFVQPGYSD--TAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALG-- 176
S EF+ G ++ T F +N DSVNS ++ +Y E A
Sbjct: 101 NTSPEFMTIGTTEHQTHTALFGSENH-------HHVDSVNSTTDNYDCYNYYLEYASAVA 153
Query: 177 --HVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFH-GHPMPESFSQIFSPNANDIR 233
+ + S+R ++ EFP K CHYF+KG+C+HGN+CR++H G + + S ++ +A
Sbjct: 154 NLNGKISKRFSNMTEFPFKTCHYFSKGYCRHGNSCRFYHHGQAVSDIVSHMYGNDA--AA 211
Query: 234 NEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHG 293
N++ SPGSL +LE+EI +LLKQR G PISIASLPM YY+KY K LQAEGYL ESQRHG
Sbjct: 212 NDEQAISPGSLAQLESEIVDLLKQR-GNPISIASLPMAYYDKYKKVLQAEGYLAESQRHG 270
Query: 294 KAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYL 353
K+GY+LTKLL RL+NSIRLIDRPHGQH+V+LAED PK++ K+D I A S+QIYL
Sbjct: 271 KSGYNLTKLLIRLRNSIRLIDRPHGQHAVVLAEDAPKFMG----KADCQNISA-SQQIYL 325
Query: 354 TFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVC 413
TFPA+STF+E+DVSNYF FG V+DVRIPCQQ+RMFGFVTFV ETVK IL KGNPH+V
Sbjct: 326 TFPADSTFSEEDVSNYFGTFGSVEDVRIPCQQRRMFGFVTFVEPETVKMILDKGNPHYVR 385
Query: 414 GARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLME 473
G+RVLVKPY+EK +L+DRKY +++H + S + D D E+ + PR+C N R L + L+E
Sbjct: 386 GSRVLVKPYKEKPKLIDRKYPYRVEHHVCYSPRYADIDAEIASSPRSCGNPRYLTRLLLE 445
Query: 474 EHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDV 533
E ++ EL+RRRL+ +Q+A K ++ +FG +M+ +VS+ + + + E F+YL +
Sbjct: 446 EQDRIFELQRRRLALLQIAQKSLSSPPHFGINMNASRVSD---DHFNVQATESFSYLQN- 501
Query: 534 LNNGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGSGISTVI 578
+Q + + +D+D S+GLNLP+SPF+ I +GIS ++
Sbjct: 502 --------EQAEYTDANNSDKDSSEGLNLPDSPFSFRIDTGISAMM 539
>gi|449463743|ref|XP_004149591.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
gi|449518519|ref|XP_004166289.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 528
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/535 (47%), Positives = 347/535 (64%), Gaps = 44/535 (8%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M+F+ T+ V++RI +++P+NV KIIG+LLL D+G+++M RLA + + I ++ AK +
Sbjct: 1 MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + +P+ +P + + +P +SP P W+ Q ++
Sbjct: 61 L-------------HQLRSMPVPVSPLAIRNRQPSTSP--------PGWEQQQLTNKH-- 97
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
+ +++ GY D++ D LQN LED + NS S F SY R
Sbjct: 98 --TPDYISLGYHDSSMYD--LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRN 153
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
+R ++P+F + CHY+NKGFCKHGN+CRY H + +P S S +++ N+N N+DHVF
Sbjct: 154 TRHYSNVPDFQPRTCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSN--VNDDHVFR 211
Query: 241 PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300
PGSLERLE EI ELLK RRG PISIASLPM+YYEKYGK LQAEGYLTESQRHGK+G+SLT
Sbjct: 212 PGSLERLEFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLT 271
Query: 301 KLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAEST 360
KLL RLKNSI++IDRPHGQH+VILAED PK++++ +++DPG IV+ +RQIY+TFPA+ST
Sbjct: 272 KLLTRLKNSIQVIDRPHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADST 331
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
FTE DVS+YF ++G V+DVRIPCQQ+RMFGFVTF ETVK IL+ + H +CGARVLVK
Sbjct: 332 FTEDDVSDYFRQYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVK 391
Query: 421 PYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIE 480
PYREKS+L++R Y F S + + +LH++ R + + + MEE +Q
Sbjct: 392 PYREKSKLLERYY--------FASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQR 443
Query: 481 LERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLN 535
R LSEM L K + + YF Y M+EL+V A E F +L+D+LN
Sbjct: 444 ELERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEA-------TESFEHLMDILN 491
>gi|297816588|ref|XP_002876177.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322015|gb|EFH52436.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/413 (57%), Positives = 273/413 (66%), Gaps = 68/413 (16%)
Query: 10 VYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKMKLGLGKPTV 68
V NRIQ+LEPEN KIIGYLLL Q H +RDMIRLAF PD ++ S+IN K +L
Sbjct: 4 VQNRIQQLEPENALKIIGYLLLMQHHNDRDMIRLAFCPDSVMRSMINCVKYELANNSHCD 63
Query: 69 SPPISPASVADLPLQFAPFSPASTRPV---SSPASMRAAASPFWDPQMAADQQQQVNSIE 125
P V +F F+ +S + + SP S+ + + FW+
Sbjct: 64 IPTSDHIQVR----KFGSFTGSSNQSLLVSISPPSVLSMGTSFWE--------------- 104
Query: 126 FVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSP 185
+T D LQN +V +FS+S+F E +RTSRRS
Sbjct: 105 -------NTNDMDSSLQN---------------NVYPEFSTSFFSQEKQGLSLRTSRRSL 142
Query: 186 SLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLE 245
SLPEFPVK+CHYFNKGFCKHGNNC +E+HV S SLE
Sbjct: 143 SLPEFPVKICHYFNKGFCKHGNNCS-----------------------DEEHVVSAVSLE 179
Query: 246 RLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLAR 305
+LE EI LLK RRG PISIASLPMMYYEKYG+TLQAEGYLTESQRHGKAGYSLTKLL R
Sbjct: 180 KLEREIIYLLKSRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLVR 239
Query: 306 LKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
LKN+IRLIDRPHGQHSVILAEDV K++EY+GEKS+ G I+AGSRQIYLTFPAES+FTE D
Sbjct: 240 LKNTIRLIDRPHGQHSVILAEDVLKFVEYTGEKSEHGAILAGSRQIYLTFPAESSFTEHD 299
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
VSNYFSK GPV+DVRIPCQQKRMFGF TF + E VK ILAKGNPHFVCGARVL
Sbjct: 300 VSNYFSKVGPVEDVRIPCQQKRMFGFETFAYTEDVKHILAKGNPHFVCGARVL 352
>gi|15231722|ref|NP_190866.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|7529722|emb|CAB86902.1| putative protein [Arabidopsis thaliana]
gi|332645500|gb|AEE79021.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 381
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/412 (56%), Positives = 287/412 (69%), Gaps = 54/412 (13%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
M+FTE+ V+NRI +LEPEN SKIIGYLLL QD +RDMIRLAF PD ++ S+IN K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 60 KLGLGKPTVSPPISPASVADLPLQFAPFSPASTRPV---SSPASMRAAASPFWDPQMAAD 116
+L K + I P+S +F S +S + + +SP S+ + + FW+
Sbjct: 61 ELA--KNSHYNNI-PSSDHIQIRKFGSLSGSSNQSLLVSASPPSVLSMGTSFWE------ 111
Query: 117 QQQQVNSIEFVQPGYSDTAAEDFCLQNQMQ-FLTLEDQFDSVNSVNSDFSSSYFYPEPAL 175
+T D L++ +Q FL ED S +FS+S+F +
Sbjct: 112 ----------------NTNDMDSSLKDNVQYFLDFEDSVTS-----PEFSTSFFSQKKQS 150
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
+RTSRRS SLPEFP+K+CHYFNKGFCKHGNNC N++ +E
Sbjct: 151 LSLRTSRRSLSLPEFPLKICHYFNKGFCKHGNNCH-------------------NNLSDE 191
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
+HV SPGSLE+LE EI ELLK RRG PISIA LPMMY+EKYG++LQAEGYLTESQRHGKA
Sbjct: 192 EHVVSPGSLEKLEREIIELLKSRRGAPISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKA 251
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
G+SLTKLLARLKN+IRLIDRPHGQHSVILAEDV K++EY+GE+S+ G I+AGSRQ+YLTF
Sbjct: 252 GFSLTKLLARLKNTIRLIDRPHGQHSVILAEDVSKFVEYTGERSEHGAILAGSRQVYLTF 311
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
PAES+FTE DVSNYFS+ GPV+DVRIPCQQKRM+GFVTFV+ ETVK+ILAK
Sbjct: 312 PAESSFTEHDVSNYFSEVGPVEDVRIPCQQKRMYGFVTFVYMETVKRILAKA 363
>gi|115474605|ref|NP_001060899.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|42407705|dbj|BAD08853.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622868|dbj|BAF22813.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|125602052|gb|EAZ41377.1| hypothetical protein OsJ_25894 [Oryza sativa Japonica Group]
gi|215767202|dbj|BAG99430.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 604
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 254/632 (40%), Positives = 354/632 (56%), Gaps = 82/632 (12%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M+ E K + R+Q++EPE+V KI G +LL++ E ++++LA+ P+ + + I + K
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFA--------PFSPASTRPVSSPASMRAAASP----- 107
L + S + + P S PV + +R SP
Sbjct: 61 LTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAA 120
Query: 108 -----------FW-----DPQMAADQQQQVNSIEFVQPGYS-DTAAED-FCLQNQMQFLT 149
+W P A QQ EF PG D +AE + L+ L
Sbjct: 121 AAFGYQVQSPQYWPDSPPAPPTKAAQQ------EFAPPGLVVDASAEGPYPLRGGQHVLD 174
Query: 150 LEDQFDSVNSVNSDFSSSYFYP--EPALGHVRT--------SRRSPSLPEFPVKVCHYFN 199
+++F Y+YP E A + +RRS L + CHYF+
Sbjct: 175 -----------DNNFGGGYYYPAGEDAFPNGGGGGGGSPARARRSNGLST--RRPCHYFS 221
Query: 200 KGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRR 259
KG CK+G NC Y H ++ + + N + ++ +PGSLE LE EITELL RR
Sbjct: 222 KGICKNGQNCHYSHHQVYQDALAGA-AINGDVYNHQPGGVTPGSLETLEMEITELLNSRR 280
Query: 260 GFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 319
G P+SIASLP +Y EKYGK LQA+GYLTESQRHGKAGYSLT+LL+RL N IR+I+RPHGQ
Sbjct: 281 GQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVIERPHGQ 339
Query: 320 HSVILAEDVPKYLEY----SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGP 375
HSV+LAED KY+++ G D G + A S QIYLTFPAESTF E DV+NYF ++GP
Sbjct: 340 HSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGP 399
Query: 376 VQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVE 435
V+DVRIPCQ++RMFGFV+F ETV IL + NPHF+CG+RVLVKPYREKS+ VDR V+
Sbjct: 400 VRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVD 459
Query: 436 KMQHPM-FCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQLACK 494
++ + +C F + D EL+T + SRL+RKQL E+ E +E+ERRR + +L
Sbjct: 460 NIKSMVPYCPPRFFEFDQELYTA--EYDASRLMRKQLAEKREMLLEMERRRATVRRLESM 517
Query: 495 PMNHHSYFGYSMDE---LQVSEAPAEQGDF--PSAERFNYLLDVLNNGSTSEDQVSHIST 549
P +YF S+++ L + ++Q D PS + L++++N Q +I
Sbjct: 518 P-PQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPD-PLEIVSNSQAPPTQAGNI-- 573
Query: 550 HYNDQDSQGLN-LPESPFA--SPIGSGISTVI 578
Y+D +S + LPESPFA +P G+ IST+I
Sbjct: 574 -YDDHESNQIELLPESPFAASAPAGNSISTII 604
>gi|205688239|sp|Q6ZK57.2|C3H54_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 54;
Short=OsC3H54
Length = 653
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 254/632 (40%), Positives = 354/632 (56%), Gaps = 82/632 (12%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M+ E K + R+Q++EPE+V KI G +LL++ E ++++LA+ P+ + + I + K
Sbjct: 50 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109
Query: 61 LGLGKPTVSPPISPASVADLPLQFA--------PFSPASTRPVSSPASMRAAASP----- 107
L + S + + P S PV + +R SP
Sbjct: 110 LTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAA 169
Query: 108 -----------FW-----DPQMAADQQQQVNSIEFVQPGYS-DTAAED-FCLQNQMQFLT 149
+W P A QQ EF PG D +AE + L+ L
Sbjct: 170 AAFGYQVQSPQYWPDSPPAPPTKAAQQ------EFAPPGLVVDASAEGPYPLRGGQHVLD 223
Query: 150 LEDQFDSVNSVNSDFSSSYFYP--EPALGHVRT--------SRRSPSLPEFPVKVCHYFN 199
+++F Y+YP E A + +RRS L + CHYF+
Sbjct: 224 -----------DNNFGGGYYYPAGEDAFPNGGGGGGGSPARARRSNGLST--RRPCHYFS 270
Query: 200 KGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRR 259
KG CK+G NC Y H ++ + + N + ++ +PGSLE LE EITELL RR
Sbjct: 271 KGICKNGQNCHYSHHQVYQDALAGA-AINGDVYNHQPGGVTPGSLETLEMEITELLNSRR 329
Query: 260 GFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 319
G P+SIASLP +Y EKYGK LQA+GYLTESQRHGKAGYSLT+LL+RL N IR+I+RPHGQ
Sbjct: 330 GQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVIERPHGQ 388
Query: 320 HSVILAEDVPKYLEY----SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGP 375
HSV+LAED KY+++ G D G + A S QIYLTFPAESTF E DV+NYF ++GP
Sbjct: 389 HSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGP 448
Query: 376 VQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVE 435
V+DVRIPCQ++RMFGFV+F ETV IL + NPHF+CG+RVLVKPYREKS+ VDR V+
Sbjct: 449 VRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVD 508
Query: 436 KMQHPM-FCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQLACK 494
++ + +C F + D EL+T + SRL+RKQL E+ E +E+ERRR + +L
Sbjct: 509 NIKSMVPYCPPRFFEFDQELYTA--EYDASRLMRKQLAEKREMLLEMERRRATVRRLESM 566
Query: 495 PMNHHSYFGYSMDE---LQVSEAPAEQGDF--PSAERFNYLLDVLNNGSTSEDQVSHIST 549
P +YF S+++ L + ++Q D PS + L++++N Q +I
Sbjct: 567 P-PQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPD-PLEIVSNSQAPPTQAGNI-- 622
Query: 550 HYNDQDSQGLN-LPESPFA--SPIGSGISTVI 578
Y+D +S + LPESPFA +P G+ IST+I
Sbjct: 623 -YDDHESNQIELLPESPFAASAPAGNSISTII 653
>gi|125560003|gb|EAZ05451.1| hypothetical protein OsI_27665 [Oryza sativa Indica Group]
Length = 607
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 254/635 (40%), Positives = 354/635 (55%), Gaps = 85/635 (13%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M+ E K + R+Q++EPE+V KI G +LL++ E ++++LA+ P+ + + I + K
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFA--------PFSPASTRPVSSPASMRAAASP----- 107
L + S + + P S PV + +R SP
Sbjct: 61 LTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAA 120
Query: 108 -----------FW-----DPQMAADQQQQVNSIEFVQPGYS-DTAAED-FCLQNQMQFLT 149
+W P A QQ EF PG D +AE + L+ L
Sbjct: 121 AAFGYQVQSPQYWPDSPPAPPTKAAQQ------EFAPPGLVVDASAEGPYPLRGGQHVLD 174
Query: 150 LEDQFDSVNSVNSDFSSSYFYP--EPALGHVRT-----------SRRSPSLPEFPVKVCH 196
+++F Y+YP E A + +RRS L + CH
Sbjct: 175 -----------DNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLST--RRPCH 221
Query: 197 YFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLK 256
YF+KG CK+G NC Y H ++ + + N + ++ +PGSLE LE EITELL
Sbjct: 222 YFSKGICKNGQNCHYSHHQVYQDALAGA-AINGDVYNHQPGGVTPGSLETLEMEITELLN 280
Query: 257 QRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRP 316
RRG P+SIASLP +Y EKYGK LQA+GYLTESQRHGKAGYSLT+LL+RL N IR+I+RP
Sbjct: 281 SRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVIERP 339
Query: 317 HGQHSVILAEDVPKYLEY----SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSK 372
HGQHSV+LAED KY+++ G D G + A S QIYLTFPAESTF E DV+NYF +
Sbjct: 340 HGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQ 399
Query: 373 FGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRK 432
+GPV+DVRIPCQ++RMFGFV+F ETV IL + NPHF+CG+RVLVKPYREKS+ VDR
Sbjct: 400 YGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRT 459
Query: 433 YVEKMQHPM-FCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQL 491
V+ ++ + +C F + D EL+T + SRL+RKQL E+ E +E+ERRR + +L
Sbjct: 460 CVDNIKSMVPYCPPRFFEFDQELYTA--EYDASRLMRKQLAEKREMLLEMERRRATVRRL 517
Query: 492 ACKPMNHHSYFGYSMDE---LQVSEAPAEQGDF--PSAERFNYLLDVLNNGSTSEDQVSH 546
P +YF S+++ L + ++Q D PS + L++++N Q +
Sbjct: 518 ESMP-PQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPD-PLEIVSNSQAPPTQAGN 575
Query: 547 ISTHYNDQDSQGLN-LPESPFA--SPIGSGISTVI 578
I Y+D +S + LPESPFA +P G+ IST+I
Sbjct: 576 I---YDDHESNQIELLPESPFAASAPAGNSISTII 607
>gi|168037568|ref|XP_001771275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677364|gb|EDQ63835.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/436 (49%), Positives = 270/436 (61%), Gaps = 55/436 (12%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ VY R+Q LEPE SKI+ +LLLQ+HGER+M+RLA + LI S++ +AK +
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMVRLALGSNVLIQSVVKKAKKE 60
Query: 61 LGLGKPTVSPPI---SPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQ 117
LGL P+ +P + D F + +SSP S+ S D A D+
Sbjct: 61 LGLEDNRDVMPLQHNAPLYIPDHDFASGSF---GSNVLSSP-SLHDQMSSLSD---AFDR 113
Query: 118 QQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGH 177
Q +++ Y E + N + S S+ D SSS P LG
Sbjct: 114 QNSLHAF------YDHYYPETYAFLNSSKEFLHSRSSSSRASLAVDSSSS-----PDLG- 161
Query: 178 VRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDH 237
P K C YF +G+CKHG++CR+ HG D
Sbjct: 162 ----------PALAWKPCLYFARGYCKHGSSCRFLHG--------------------MDD 191
Query: 238 VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGY 297
+PGSLERLE E+ ELL+ RR P+SIASLP +YYE++GKTLQAEGYLTESQRHGKAGY
Sbjct: 192 GMAPGSLERLEIELQELLRGRRA-PVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGY 250
Query: 298 SLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEK--SDPGGIVAGSRQIYLTF 355
SLTKLLARLKN++ LIDRPHGQH+V+LAED ++ Y + D GI SRQIYLTF
Sbjct: 251 SLTKLLARLKNTVTLIDRPHGQHAVVLAEDAHRFTAYRSDHRGEDLSGINPSSRQIYLTF 310
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
PAESTFTE+DV+ +F +GPVQDVRIP QQKRMFGFVTFV++ETVK IL++GNPH++CGA
Sbjct: 311 PAESTFTEEDVTAHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGA 370
Query: 416 RVLVKPYREKSRLVDR 431
RVLVKPYREK + DR
Sbjct: 371 RVLVKPYREKGKHGDR 386
>gi|168011119|ref|XP_001758251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690707|gb|EDQ77073.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 421
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 216/459 (47%), Positives = 288/459 (62%), Gaps = 66/459 (14%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ VY R+Q LEPE SKI+ +LLLQ+HGER+M+RLA + L+ S++ +AK +
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMLRLALGSNVLMQSVVKKAKKE 60
Query: 61 LGLGKP-TVSPPI----SPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAA 115
LGL +V PP+ +P + D F + ++SP + ++A
Sbjct: 61 LGLDDSRSVMPPLQKRPAPLYIPDHEFASGGFG---SNVLTSPGLLDQV-------KLAT 110
Query: 116 DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPE--- 172
QQQ N + F+Q + L + + L+ D D NS+ + ++YP+
Sbjct: 111 IQQQHHNQL-FLQ--------DQLPLHDHLSLLS--DAVDQQNSLR--VYTDHYYPDTYA 157
Query: 173 -----PALGH----------VRTSRRSPSL-PEFPVKVCHYFNKGFCKHGNNCRYFHGHP 216
+ H + S P L P K C YF +G+CKHG++CR
Sbjct: 158 FLNSSKEILHSRSSSSRASPIVDSSSPPDLGPTLAWKPCLYFARGYCKHGSSCR------ 211
Query: 217 MPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKY 276
S S ++R +D + +PGSLERLE E+ ELL+ RR P+SIASLP +YYE++
Sbjct: 212 -----SPASSNGHRELRVDDGM-APGSLERLEIELQELLRGRRA-PVSIASLPQLYYERF 264
Query: 277 GKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYL---- 332
GKTLQAEGYLTESQRHGKAGYSLTKLLARLKN++ LIDRPHGQH+V+LAED ++
Sbjct: 265 GKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQHAVVLAEDAHRFTVHRS 324
Query: 333 EYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFV 392
++ GE D GI SRQIYLTFPAESTF E+DV+++F +GPVQDVRIP QQKRMFGFV
Sbjct: 325 DHRGE--DLSGINPSSRQIYLTFPAESTFCEEDVTSHFRAYGPVQDVRIPYQQKRMFGFV 382
Query: 393 TFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR 431
TFV++ETVK IL++GNPH++CGARVLVKPYREK + DR
Sbjct: 383 TFVYSETVKAILSEGNPHYICGARVLVKPYREKGKHGDR 421
>gi|302796663|ref|XP_002980093.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
gi|300152320|gb|EFJ18963.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
Length = 394
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 262/444 (59%), Gaps = 63/444 (14%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V+ R+Q +PENVSKIIG +LLQD E++M RLA D L+ S I +A+ +
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAP--------FSPASTRPVSSPASMRAAASPFWDPQ 112
LGL P +S F P SSP+++ SP D +
Sbjct: 61 LGLFAANPHPGLSDQHHHHRQHHHQQRINRPSLLFIPEGGTVSSSPSNL-FQPSPSPD-E 118
Query: 113 MAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLT-----LEDQFDSVNSVNSDFSSS 167
A DQ ++ +F +D L+N +F T + Q + + F +S
Sbjct: 119 FATDQWLLNHNHQF-------QLHQDPLLKNTSRFSTSSSPAADAQRRHLQQLQ--FPAS 169
Query: 168 YFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSP 227
++ L T K C Y++KG CK G +CR SP
Sbjct: 170 HYPSSHDLAMALT-----------CKPCLYYSKGHCKRGTSCR---------------SP 203
Query: 228 NANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLT 287
S GSLERLE E+ ELL+ RR P+SIASLP +Y+EK+G+ LQA+GYLT
Sbjct: 204 ------------SSGSLERLEMELQELLRGRRT-PVSIASLPQLYFEKFGRALQAQGYLT 250
Query: 288 ESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAG 347
ESQRHGKAG SLTKLLARLK S+ LIDRPHGQH+V+LAED +++ Y ++ D +
Sbjct: 251 ESQRHGKAGCSLTKLLARLKGSVALIDRPHGQHAVVLAEDAQRFVGYRADRDDLKDVNPS 310
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
SRQIYLTFPAESTFTE DVS +F +GPVQDVRIP QQKRMFGFVTF++ ETVK IL++G
Sbjct: 311 SRQIYLTFPAESTFTEDDVSAHFRSYGPVQDVRIPYQQKRMFGFVTFIYPETVKAILSEG 370
Query: 408 NPHFVCGARVLVKPYREKSRLVDR 431
NPH++CGARVLVKPYREK++L +R
Sbjct: 371 NPHYICGARVLVKPYREKAKLGER 394
>gi|357115916|ref|XP_003559731.1| PREDICTED: zinc finger CCCH domain-containing protein 54-like
[Brachypodium distachyon]
Length = 552
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 261/408 (63%), Gaps = 56/408 (13%)
Query: 195 CHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHV------FSPGSLERLE 248
CHYF KG CK+G NC Y H Q+++ D+ ++ H+ +PGSLERLE
Sbjct: 175 CHYFFKGICKNGQNCHYSH--------HQVYA----DMDHQHHLQGNGGGTTPGSLERLE 222
Query: 249 AEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
EITELL RRG P+SIASLP +Y E YGK LQA+GYLTESQRHGKAGYSLTKLL+RL N
Sbjct: 223 VEITELLHSRRGQPVSIASLPTLYGEMYGKGLQADGYLTESQRHGKAGYSLTKLLSRL-N 281
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGG-IVAGSRQIYLTFPAESTFTEQDVS 367
IR+I+RPHGQHSV+LAED KY + +SD GG + A S QIYLTFP++S+FTE DV+
Sbjct: 282 KIRVIERPHGQHSVVLAEDAAKYTDC---RSDRGGDMPASSNQIYLTFPSDSSFTEDDVA 338
Query: 368 NYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSR 427
NYF ++GPV+DVRIPCQ +RMFGFV+F ETV +L + NPHF+CG+RVL KPYREK++
Sbjct: 339 NYFGQYGPVRDVRIPCQDQRMFGFVSFQNPETVTTLLTRRNPHFICGSRVLAKPYREKTK 398
Query: 428 LVDRKYVEKMQHPMFCSLHFTDGDTE--------LHTMPRACNNSRLLRKQLMEEHE-QA 478
++ + ++ + + SL + + L +P ++ RL RKQL+E+ + +
Sbjct: 399 CINERSSIEVVYKVRPSLSLPQKEEKKLHPHQFWLTDLPAEYDSPRLARKQLVEKRDNRL 458
Query: 479 IELERRRLSEMQLACKPMNHHSYFGYSMDEL----QVSEAPAEQGDFPSAERFNYLLDVL 534
+ELERR L+ +++ +P H +YF S+ ++ S A E G L+D L
Sbjct: 459 LELERRHLAGLRV--EP--HVAYFDCSIRDIGPFNSQSAAAKELG----------LMDPL 504
Query: 535 ------NNGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGSGIST 576
N STS+ S +Y+DQ+S + LPESPFAS +G S
Sbjct: 505 VTPAPMNIVSTSQAPPIKASNNYDDQESNQIELPESPFASSAPAGNSV 552
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M+ E TK V++R+QK++P+NV KI+G +LL++ E M++LA+ PD + + + +AK
Sbjct: 1 MESAELTKLVFSRVQKVDPDNVCKIVGCILLREPDEDSMVQLAYGPDATLVATVVDAKAT 60
Query: 61 LG 62
L
Sbjct: 61 LA 62
>gi|302785371|ref|XP_002974457.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
gi|300158055|gb|EFJ24679.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
Length = 355
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/427 (44%), Positives = 252/427 (59%), Gaps = 77/427 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+ +AVY R+Q L+ NV KI+GYLLLQD E++M+ LA S D ++ + + AK +
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL +S A L + P A V S P +A Q
Sbjct: 61 LGL----ISSGGGSAGDQALAIDSIPCLGAEGSQVLGLGSQ--------SPVVA----QD 104
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
++ I + +P Y ++ LT D +VN+
Sbjct: 105 LSDI-WERPSY-------------LEKLTRADHVAAVNAT-------------------- 130
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
SPS P + K C YF +G+CKHG+ CR +++D+ V
Sbjct: 131 ---SPSSPSW--KPCLYFARGYCKHGSACR-----------------SSSDLTGSSMV-- 166
Query: 241 PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300
SL LEAE+ ELL RR P+SIASLP +Y+EK+GK+LQA+GYLTESQRHGKAG+SLT
Sbjct: 167 -DSLAGLEAEMRELLTGRR-TPVSIASLPQLYHEKFGKSLQADGYLTESQRHGKAGHSLT 224
Query: 301 KLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAEST 360
KLL +L+ ++ LIDRPHGQH+V+LAED K++ Y G+ S SRQIYLTFPAES
Sbjct: 225 KLLIKLRATVTLIDRPHGQHAVVLAEDAHKFMAY-GQDSSAIAANPSSRQIYLTFPAESG 283
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
F+E+DV+ +FS FGPVQDVRIP QQKRMFGFVTF ++ETV+ ILA+GNPH++CGARVLVK
Sbjct: 284 FSEEDVTTHFSSFGPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEGNPHYICGARVLVK 343
Query: 421 PYREKSR 427
PY+EK R
Sbjct: 344 PYKEKGR 350
>gi|302808135|ref|XP_002985762.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
gi|300146671|gb|EFJ13340.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
Length = 353
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/427 (44%), Positives = 251/427 (58%), Gaps = 79/427 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+ +AVY R+Q L+ NV KI+GYLLLQD E++M+ LA S D ++ + + AK +
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL +S A L + P A V S SP Q
Sbjct: 61 LGL----ISSGGGSADDQALAIDSIPCLGAEGSQVLGLGSQ----SPV----------QD 102
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
++ I + +P Y ++ LT D +VN+
Sbjct: 103 LSDI-WERPSY-------------LEKLTRADHVAAVNAT-------------------- 128
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
SPS P + K C YF +G+CKHG+ CR +++D+ V
Sbjct: 129 ---SPSSPSW--KPCLYFARGYCKHGSACR-----------------SSSDLTGSSMV-- 164
Query: 241 PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300
SL LEAE+ ELL RR P+SIASLP +Y+EK+GK+LQA+GYLTESQRHGKAG+SLT
Sbjct: 165 -DSLAGLEAELRELLTGRR-TPVSIASLPQLYHEKFGKSLQADGYLTESQRHGKAGHSLT 222
Query: 301 KLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAEST 360
KLL +L+ ++ L+DRPHGQH+V+LAED K++ Y G+ S SRQIYLTFPAES
Sbjct: 223 KLLIKLRATVTLLDRPHGQHAVVLAEDAHKFMAY-GQDSSAIAANPSSRQIYLTFPAESG 281
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
F+E+DV+ +FS FGPVQDVRIP QQKRMFGFVTF ++ETV+ ILA+GNPH++CGARVLVK
Sbjct: 282 FSEEDVTTHFSSFGPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEGNPHYICGARVLVK 341
Query: 421 PYREKSR 427
PY+EK R
Sbjct: 342 PYKEKGR 348
>gi|302822034|ref|XP_002992677.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
gi|300139523|gb|EFJ06262.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
Length = 361
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 144/237 (60%), Positives = 175/237 (73%), Gaps = 28/237 (11%)
Query: 195 CHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL 254
C Y++KG CK G +CR SP S GSLERLE E+ EL
Sbjct: 153 CLYYSKGHCKRGTSCR---------------SP------------SSGSLERLEMELQEL 185
Query: 255 LKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLID 314
L+ RR P+SIASLP +Y+EK+G+ LQA+GYLTESQRHGKAG SLTKLLARLK S+ LID
Sbjct: 186 LRGRRT-PVSIASLPQLYFEKFGRALQAQGYLTESQRHGKAGCSLTKLLARLKGSVALID 244
Query: 315 RPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFG 374
RPHGQH+V+LAED +++ Y ++ D + SRQIYLTFPAESTFTE DVS +F +G
Sbjct: 245 RPHGQHAVVLAEDAQRFVGYRADRDDLKDVNPSSRQIYLTFPAESTFTEDDVSAHFRSYG 304
Query: 375 PVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR 431
PVQDVRIP QQKRMFGFVTF++ ETVK IL++GNPH++CGARVLVKPYREK++L +R
Sbjct: 305 PVQDVRIPYQQKRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKLGER 361
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V+ R+Q +PENVSKIIG +LLQD E++M RLA D L+ S I +A+ +
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 LGLGKPTVSPPIS 73
LGL P +S
Sbjct: 61 LGLFAANPHPGLS 73
>gi|147807899|emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
Length = 697
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 281/556 (50%), Gaps = 106/556 (19%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
MD E+T+ V++RIQ L+PEN SKI+GY+LL QDHGE++MIRLAF P+ L+++LI +AK
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 KLGLGKPTVSP--------PISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDP 111
+LG+ T S PIS + LP F+P+S+ PVS + +R+ S
Sbjct: 61 QLGILSNTPSTPTSPSPFNPISKPT--RLPTNNG-FNPSSSWPVSGFSDLRSPNSTTAQL 117
Query: 112 QMAADQQQQVN------------SIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNS 159
AA N SI + + C N M L+D +N
Sbjct: 118 SYAAVVNGATNVSDLGTVSSSPASIPYYNNCSGSNNSSVVCNDNVMDDYQLQDHLSFLND 177
Query: 160 VNSDFSSSYFYPE------PALGHVRTSRRSPSLPE-----------FPVKVCHYFNKGF 202
+ F P P+ G + RRS S + F K C YF +GF
Sbjct: 178 ASK--PEDLFDPRLELAMSPSFGETQLHRRSYSFNDACYGSDDGASGFGWKPCLYFARGF 235
Query: 203 CKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFP 262
CK+GN C++ HG F+ S A+ + V SPG L+ E E+ +QR
Sbjct: 236 CKNGNTCKFLHG-----GFAD--SVEASSAASAAIVGSPGKLDGFEQEMLRSQQQR---- 284
Query: 263 ISIASLPMMYYE-KYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHS 321
+++AS M Y K + E+QR A +
Sbjct: 285 LAVASQLMAGLNFPYNKCMNFFMQQNETQRSAAA-------------------------A 319
Query: 322 VILAEDVPKYLEYSGEKSD------PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGP 375
+++ E++ K+ E++D G + GSRQIYLTFPA+STF E+DVSNYFS FGP
Sbjct: 320 LMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGP 379
Query: 376 VQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRK--- 432
VQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ ++K
Sbjct: 380 VQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQH 439
Query: 433 -----------YVEKMQHPMFCSLHFTDGDT--ELHTMPRACNNSR--LLRKQLMEEHE- 476
+E+ ++ S D +LH R N++ LLR++L E+ +
Sbjct: 440 QQQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADL 499
Query: 477 -QAIELERRRLSEMQL 491
QAIEL+ RRL +QL
Sbjct: 500 QQAIELQGRRLMNLQL 515
>gi|225436555|ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Vitis vinifera]
Length = 695
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 289/557 (51%), Gaps = 110/557 (19%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
MD E+T+ V++RIQ L+PEN SKI+GY+LL QDHGE++MIRLAF P+ L+++LI +AK
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 KLGLGKPTVSP--------PISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDP 111
+LG+ T S PIS + LP F+P+S+ PVS + +R+ S
Sbjct: 61 QLGILSNTPSTPTSPSPFNPISKPT--RLPTNNG-FNPSSSWPVSGFSDLRSPNSTTAQL 117
Query: 112 QMAA--DQQQQVNSIEFVQ------PGYS-------------DTAAEDFCLQNQMQFLTL 150
AA + V+ + V P Y+ D +D+ LQ+ + FL
Sbjct: 118 SYAAVVNGATNVSDLGTVSSSPASIPYYNNCSSSNNSSVVCNDNVMDDYQLQDHLSFLND 177
Query: 151 EDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPE-----------FPVKVCHYFN 199
+ + + + + S P+ G + RRS S + F K C YF
Sbjct: 178 ASKPEDLFDPRLELAMS-----PSFGETQLHRRSYSFNDACYGSDDGASGFGWKPCLYFA 232
Query: 200 KGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRR 259
+GFCK+GN C++ HG F+ S A+ + V SPG L+ E E+ +QR
Sbjct: 233 RGFCKNGNTCKFLHG-----GFAD--SVEASSAASAAIVGSPGKLDGFEQEMLRSQQQR- 284
Query: 260 GFPISIASLPMMYYE-KYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHG 318
+++AS M Y K + E+QR A
Sbjct: 285 ---LAVASQLMAGLNFPYNKCMNFFMQQNETQRSAAA----------------------- 318
Query: 319 QHSVILAEDVPKYLEYSGEKSD------PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSK 372
++++ E++ K+ E++D G + GSRQIYLTFPA+STF E+DVSNYFS
Sbjct: 319 --ALMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSI 376
Query: 373 FGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRK 432
FGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ ++K
Sbjct: 377 FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKK 436
Query: 433 ------------YVEKMQHPMFCSLHFTDGDT--ELHTMPRACNNSR--LLRKQLMEEHE 476
+E+ ++ S D +LH R N++ LLR++L E+ +
Sbjct: 437 QQHQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQAD 496
Query: 477 --QAIELERRRLSEMQL 491
QAIEL+ RRL +QL
Sbjct: 497 LQQAIELQGRRLMNLQL 513
>gi|413957279|gb|AFW89928.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 381
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 228/436 (52%), Gaps = 95/436 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E R++++EPEN SKI+G +LL++ +DM++LA+ D E K
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGND-------AEVHAK 53
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
+ K + ++ S SSPA +W P Q
Sbjct: 54 ISHAKAMLDAIVACCS-------------------SSPA----FGYHYWPPVPNKAQ--- 87
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL----- 175
AE++ LQ Q + Y+ E AL
Sbjct: 88 ---------------AEEYALQPQ----------------HYSGGGCYYASENALIYNGG 116
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
G R+ S P CHYF KG CK+G +C Y H R E
Sbjct: 117 GPPRSRLSSTRRP------CHYFIKGICKNGQSCHYSHH------------------RQE 152
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
V S G+LE+LE EI ELLK R G P+SIASLP +Y ++YGK+L+A+GYLTES+RHGKA
Sbjct: 153 AQVCS-GALEKLELEIIELLKSRHGQPLSIASLPTLYGDRYGKSLKADGYLTESKRHGKA 211
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
GYSL++L++RL + I I+RPHGQH V+LAED +Y E G + + S Q+YLTF
Sbjct: 212 GYSLSRLISRL-SKITTIERPHGQHYVVLAEDAGRYKELMSRGERGGDMGSSSHQVYLTF 270
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
P+ESTF E+DV+NYF +G V+DVRIP Q+KRMFGFV+F ETV IL PHF+ +
Sbjct: 271 PSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFHNPETVNTILTMRIPHFIGES 330
Query: 416 RVLVKPYREKSRLVDR 431
RVLVK Y EKS+ ++R
Sbjct: 331 RVLVKRYIEKSKCIER 346
>gi|356529848|ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 696
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 213/654 (32%), Positives = 318/654 (48%), Gaps = 113/654 (17%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+PEN SKI+G LLLQDHGE+++IRLAF P+ L++S+I +A+ +
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLGKPTVSPPIS---PASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQ-MAAD 116
LGL P+ SP + P+ L Q + S S + +P++ S P + A
Sbjct: 61 LGL--PSNSPHTTSTLPSPSPYLSKQNSTSSRLSALTIPNPSASWPTMSELQTPDDLVAG 118
Query: 117 QQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVN----------SVNSDFSS 166
+S+ + G SD ++F LQ+Q+ FL + + + NSD SS
Sbjct: 119 SLTSSSSLPYYANGGSD-PVDEFQLQDQLAFLNDGSNTSTSHKNNNPDLFYPNNNSDLSS 177
Query: 167 S-------YFYPEPALGHVRTSRRSPSLPE-----------FPVKVCHYFNKGFCKHGNN 208
S +P G RRS S+ + K C YF +G+CK+G +
Sbjct: 178 SPTTAADPTLFPSDGWGG-SLHRRSCSVSDACLGSEDPNSGLGWKPCLYFARGYCKNGTS 236
Query: 209 CRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASL 268
CR+ HG V SP +E +E + ELL+ +
Sbjct: 237 CRFLHGG---------LGDADVGGAAAAMVGSPSKIEMME-QCHELLRSKS--------- 277
Query: 269 PMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDV 328
+++ + L A L S + S+ LL + +N + +++++ED+
Sbjct: 278 ----FQQ--QRLAAASQLMASSIFPYSPKSMNFLLQQQQNDTQRA----AAAALMMSEDL 327
Query: 329 PKYLEYSGEKSD-----PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC 383
K+ E++D P + SRQIYLTFPA+STF E+DVSNYFS +GPVQDVRIP
Sbjct: 328 HKFGRSRLERNDFSLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 387
Query: 384 QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFC 443
QQKRMFGFVTFV+ ETVK IL+KGNPHFVC ARVLVKPY+EK ++ D+K +++ F
Sbjct: 388 QQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQVDRGDFS 447
Query: 444 SLHFTDG-----DTELHTMPRACNNSR--LLRKQLMEEHE--QAIELERRRLSEMQLACK 494
G +L R N++ L R++L E+ + QA+EL+ RRL +QL
Sbjct: 448 PCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDI 507
Query: 495 PMNHHSYFGY---------------------------SMDELQVSEAPAEQGDFPSAER- 526
+H S E + APA + ++
Sbjct: 508 KKHHQRALSTGSPIPSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASVSAGQQP 567
Query: 527 --FNYLLDVLNNGSTS-EDQVSHISTHYNDQDSQGL---NLPESPFASPIGSGI 574
+ +V+ NG ++ S+ ++D D Q NLP+SPFASP + +
Sbjct: 568 VNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTKAAV 621
>gi|226500396|ref|NP_001140295.1| uncharacterized protein LOC100272340 [Zea mays]
gi|194698886|gb|ACF83527.1| unknown [Zea mays]
gi|413957280|gb|AFW89929.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 472
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 258/517 (49%), Gaps = 105/517 (20%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E R++++EPEN SKI+G +LL++ +DM++ L Y E K
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQ-------LAYGNDAEVHAK 53
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
+ K + ++ S SSPA +W P Q
Sbjct: 54 ISHAKAMLDAIVACCS-------------------SSPA----FGYHYWPPVPNKAQ--- 87
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL----- 175
AE++ LQ Q + Y+ E AL
Sbjct: 88 ---------------AEEYALQPQ----------------HYSGGGCYYASENALIYNGG 116
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
G R+ S P CHYF KG CK+G +C Y H R E
Sbjct: 117 GPPRSRLSSTRRP------CHYFIKGICKNGQSCHYSHH------------------RQE 152
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
V S G+LE+LE EI ELLK R G P+SIASLP +Y ++YGK+L+A+GYLTES+RHGKA
Sbjct: 153 AQVCS-GALEKLELEIIELLKSRHGQPLSIASLPTLYGDRYGKSLKADGYLTESKRHGKA 211
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
GYSL++L++RL + I I+RPHGQH V+LAED +Y E G + + S Q+YLTF
Sbjct: 212 GYSLSRLISRL-SKITTIERPHGQHYVVLAEDAGRYKELMSRGERGGDMGSSSHQVYLTF 270
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
P+ESTF E+DV+NYF +G V+DVRIP Q+KRMFGFV+F ETV IL PHF+ +
Sbjct: 271 PSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFHNPETVNTILTMRIPHFIGES 330
Query: 416 RVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLL---RKQLM 472
RVLVK Y EKS+ ++R ++ F + + +R++ +++L+
Sbjct: 331 RVLVKRYIEKSKCIERYRPRALRR--FVGMDMDMDMNDDDDDYDDQPPARMVMRNQQRLL 388
Query: 473 EEHEQAIELERRRLSEMQLACKPMNH-HSYFGYSMDE 508
++ IELER+R A P + H YF S+ +
Sbjct: 389 ATEKRLIELERKRF----FAMPPQQYQHVYFDCSIGD 421
>gi|38230504|gb|AAR14273.1| predicted protein [Populus tremula x Populus alba]
Length = 705
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 219/666 (32%), Positives = 315/666 (47%), Gaps = 133/666 (19%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +T+ V++RIQ L+PEN SKI+G LL+QDHGE++MIRLAF P+ L++S+I +A+ +
Sbjct: 1 MDAYGATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLGKPT-----VSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAAS--------- 106
LGL PT S P S + + S S + P S+
Sbjct: 61 LGLSSPTNLSTSPSSPSPLYSSNPVAISRQNNSSTSRLGFNIPPSLAIPNPSSNNSSSWS 120
Query: 107 --PFWDPQMAADQQQQVNSIEF------VQPGYSDTAAEDFCLQNQMQFLTLED------ 152
P D M + +N V+ G ++F LQ+Q+ FL +
Sbjct: 121 DLPNPDDLMISPNDSSLNPASVPSYANGVRGGGESDLMDEFHLQDQLSFLMIIHKSRSKS 180
Query: 153 ------QFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPE----------FPVKVCH 196
Q D+++S + S S +P G V RRS S+ + F + C
Sbjct: 181 SDLFYPQLDALSSP-TGASDSMMFPSYWGGSVH--RRSCSVSDVLGSEDPNSGFGWRPCL 237
Query: 197 YFNKGFCKHGNNCRYFHGHPMP-ESFSQIFSPNAN---DIRNEDHVF---SPGSLERLEA 249
YF +G+CK+G+NCR+ HG + + SPN+N D+ ++ H +RL A
Sbjct: 238 YFARGYCKNGSNCRFVHGGLGELDGAGVVGSPNSNNKIDMMDQCHELLRSKSAHQQRLAA 297
Query: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309
+ FP S S+ + ++ +SQR
Sbjct: 298 ASQLMSGSAASFPYSPKSMNFLLQQQQ----------NDSQRAAAT-------------- 333
Query: 310 IRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNY 369
++++ ED+ K+ +++D + SRQIYLTFPA+STF E+DVSNY
Sbjct: 334 -----------ALMMGEDMHKFGRSRLDRNDL--VNPASRQIYLTFPADSTFREEDVSNY 380
Query: 370 FSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLV 429
FS +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC ARVLVKPY+EK ++
Sbjct: 381 FSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVP 440
Query: 430 DRK-YVEKMQHPMFCSLHFTDG-------DTELHTMPRACNNSRLLRKQL--MEEHEQAI 479
D+K ++++ F G D +L L R++L + +QA+
Sbjct: 441 DKKQQQQQVERGEFSPCGTPTGLDSRDPFDLQLGAGMFYNTQDMLWRRKLEGQADLQQAL 500
Query: 480 ELERRRLSEMQLACKPMNHH----------------SYFGYSMD--ELQVS-EAPAEQ-- 518
EL+ RRL +QL +HH YF +S+ L S EAP E
Sbjct: 501 ELQSRRLMSLQLLDVKKHHHRALSNGSPCPLTYSLSQYFNHSLAFPPLHSSTEAPQENCS 560
Query: 519 GDFPSAERFNYLLDVLNNG-------STSEDQVSHISTHYNDQDSQGL---NLPESPFAS 568
P+ L + ++N S+ E+ S+H D D Q NLP+SPFAS
Sbjct: 561 SSMPATSVTARLKNKISNATSGKEYTSSEENGSGKESSHGEDSDLQESLEHNLPDSPFAS 620
Query: 569 PI-GSG 573
P G+G
Sbjct: 621 PAKGTG 626
>gi|356542895|ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 698
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 215/667 (32%), Positives = 316/667 (47%), Gaps = 147/667 (22%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+ EN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +A+
Sbjct: 1 MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKD 60
Query: 61 LGLG--------------------KPTVSPPISPASVADLPLQFAPFSPASTRPVSSPAS 100
LGL S +S + + +LP +P+++ P S
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNSNTSSRLSVSGI-NLPPPLTIPNPSASWPTMSELQ 119
Query: 101 MRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSV 160
+ A ++S+ F G SD ++F LQ+Q+ FL + S++
Sbjct: 120 T----------DLVAGSSTSLSSLPFYANGGSD-PIDEFQLQDQLSFLN-DGSNTSISHK 167
Query: 161 N---------SDFSSS-------YFYPEPALGHVRTSRRSPSLPE-----------FPVK 193
N SDFSSS +P G RRS S+ + K
Sbjct: 168 NNPDLFYPTYSDFSSSPTTAADPTLFPSYGWGG-SLHRRSCSVNDACLGTEDPNSGLGWK 226
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDH-VFSPGSLERLEAEIT 252
C YF +G+CK+G +CR+ HG + + SP+ ++ + H + S ++
Sbjct: 227 PCLYFARGYCKNGTSCRFLHGGLGDADAAMVGSPSKIEMMEQCHELLRSKSAQQQRLAAA 286
Query: 253 ELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRL 312
L FP S + + ++ T QR A
Sbjct: 287 SQLMSSSTFPYSPKCMNFLLQQQQNDT----------QRAAAA----------------- 319
Query: 313 IDRPHGQHSVILAEDVPKYLEYSGEKSD-----PGGIVAGSRQIYLTFPAESTFTEQDVS 367
+++++ED+ K+ E++D PG + SRQIYLTFPA+STF E+DVS
Sbjct: 320 --------ALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREEDVS 371
Query: 368 NYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSR 427
NYFS +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPHFVC ARVLVKPY+EK +
Sbjct: 372 NYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGK 431
Query: 428 LVDRKY-VEKMQHPMF------CSLHFTDGDTELHTMPRACNNSR--LLRKQLMEEHE-- 476
+ D+K +++ F L D +L R N++ L R++L E+ +
Sbjct: 432 VPDKKLQQQQVDRGDFSPCGTPTGLDARDHQFDLQLGSRMFYNTQDMLWRRKLEEQADLQ 491
Query: 477 QAIELERRRLSEMQL----------ACK----PMNHHSYFGYSMDELQ----VSEAPAEQ 518
QA+EL+ RRL +QL C P HS ++ + + SEAP E
Sbjct: 492 QALELQSRRLMGLQLLDIKKHHQRALCTGSPIPSPTHSPNMFNQNLVPSFHITSEAPKES 551
Query: 519 GDFPS------------AERFNYLLDVLNNGSTSEDQVS-HISTHYNDQDSQGL---NLP 562
G + + + +V+ NG D+ + S+ ++D D Q NLP
Sbjct: 552 GSTSAPAGTASVSTGQQSVNISVGKEVMVNGEDGYDEGNGRQSSSHDDCDLQECLEHNLP 611
Query: 563 ESPFASP 569
+SPFASP
Sbjct: 612 DSPFASP 618
>gi|356531625|ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 700
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 279/546 (51%), Gaps = 91/546 (16%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +A+ +
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLGKPTVSPP---------ISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDP 111
LGL + P +S + L PA T P +P+S + P
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFLSRQNSTSSRLSGINIPPALTIP--NPSSWPTMSDDLMSP 118
Query: 112 Q-MAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFL-------------TLEDQFDSV 157
+ +S+ + G SD +DF LQ+Q+ FL T D F
Sbjct: 119 NHLVVGSSTSSSSLPYYANGGSD-PIDDFQLQDQLSFLNDGSPTSTAFAHKTNPDLFYPT 177
Query: 158 NSVNSDFSSS-------YFYPEPALGHVRTSRRSPSLPE-----------FPVKVCHYFN 199
N NSD SSS +P G RRS S+ + K C YF
Sbjct: 178 N--NSDLSSSPTTAVDPTLFPSYGWGG-SIHRRSCSVNDACLGSEDPSSGLGWKPCLYFA 234
Query: 200 KGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRR 259
+G+CK+G +CR+ H +A+ V SPG +E +E + ELL+ +
Sbjct: 235 RGYCKNGTSCRFLH----------GGIGDADGGGAAAMVGSPGKIEMME-QCHELLRSK- 282
Query: 260 GFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 319
S+ + L A L S + S+ LL + +N +
Sbjct: 283 ----SVQQ----------QRLAAASQLMASSTFPYSPKSMNFLLQQQQNDTQRA----AA 324
Query: 320 HSVILAEDVPKYLEYSGEKSD-----PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFG 374
+++++ED+ K+ E++D P + SRQIYLTFPA+STF E+DVSNYFS +G
Sbjct: 325 AALMMSEDLHKFGRSRLERNDFSLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYG 384
Query: 375 PVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYV 434
PVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPHFVC ARVLVKPY+EK ++ D+K
Sbjct: 385 PVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQ 444
Query: 435 EKMQHPMFCSLHFTDG-----DTELHTMPRACNNSR--LLRKQLMEEHE--QAIELERRR 485
+++ F G +L R N++ L R++L E+ + QA+EL+ RR
Sbjct: 445 QQVDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRR 504
Query: 486 LSEMQL 491
L +QL
Sbjct: 505 LMGLQL 510
>gi|222637701|gb|EEE67833.1| hypothetical protein OsJ_25610 [Oryza sativa Japonica Group]
Length = 696
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 299/629 (47%), Gaps = 102/629 (16%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLGKPTVSPPISPASVAD----------LPLQFAPFSPASTRPVS----------SPAS 100
LGL S P +P SV+ L Q + + P+S SPA+
Sbjct: 61 LGL--LPASGPGTPTSVSAAAAAAHSPFMLSRQNSGRCGTAPSPLSEMVGLGDELISPAN 118
Query: 101 MRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSV 160
SPF+ D+ Q + + F+ G +QM +
Sbjct: 119 GGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAG-------HQMPMFDGGECRSPGGGD 171
Query: 161 NSDFSSSYFYPEPALGHVRTSRRSPSLPEFPV--------KVCHYFNKGFCKHGNNCRYF 212
FS + + GH RRS S+ E + K C Y+ +G+CK+G+ CR+
Sbjct: 172 GGLFSYNLGWANGGPGH----RRSASVSELCLGGADGLGWKPCLYYARGYCKNGSACRFV 227
Query: 213 HGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPI----SIASL 268
HG +P+ + P+A + + +D + S +RL A FP S+
Sbjct: 228 HGG-LPDDAAGKMDPSAVEQQCQDFLIRSKS-QRLAAAA---------FPYSPTGSLPGS 276
Query: 269 PMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDV 328
P + LQ + ESQR + L+ + + + RP + + +
Sbjct: 277 PSAATKCLSLLLQQQQQQNESQRA----AAAAALMLGGDEAHKFMGRPRLERADFASMMN 332
Query: 329 PKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM 388
P GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRM
Sbjct: 333 P-----------------GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRM 375
Query: 389 FGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFT 448
FGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D+K + + F S
Sbjct: 376 FGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKKQHQPGERVDFSSCTTP 435
Query: 449 DG-----DTELHTMP------RACNNSRLLRKQ-----LMEEHEQAIELERRRLSEMQL- 491
G ++H + N LLR++ E +QAIEL RRL +QL
Sbjct: 436 TGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQLL 495
Query: 492 ------ACKPMNHHSYFGYSMDELQVS-EAPAEQGDFPSAERFNYLLDVLNNGSTSEDQV 544
A P + F S + E+P + G+ F NG+ E+
Sbjct: 496 DFKSRAAAAPTPIGNPFSASQTAANATGESPPDSGELGKGSGFLLAHKKAVNGADKEEST 555
Query: 545 SHISTHYNDQD-SQGLNLPESPFASPIGS 572
S+ D D S NLP+SPFASP S
Sbjct: 556 GESSSPNTDSDQSVEHNLPDSPFASPTKS 584
>gi|302807700|ref|XP_002985544.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
gi|300146750|gb|EFJ13418.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
Length = 197
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 158/214 (73%), Gaps = 17/214 (7%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
K C Y+++GFCKHG++CR+ H H I + SP SLERL+ E+
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDH----------------IAGDGSSPSPSSLERLDRELQ 44
Query: 253 ELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRL 312
ELL R P+SIA+LP +YYE++G+ LQAEGYLTESQRHGK+GY+LT+LL++LK SI +
Sbjct: 45 ELLSSRTS-PVSIAALPQLYYERFGRPLQAEGYLTESQRHGKSGYNLTRLLSKLKGSITV 103
Query: 313 IDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSK 372
IDRPHGQH+V+LAED K+ ++GE D G+ SRQIYLTFPAES+F+E DVS +F
Sbjct: 104 IDRPHGQHAVVLAEDAHKFATFAGEHYDLSGVNPSSRQIYLTFPAESSFSEDDVSTHFRA 163
Query: 373 FGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
+GPVQDVRIP QQKRMFGFVTFV+ ETVK +L++
Sbjct: 164 YGPVQDVRIPFQQKRMFGFVTFVYPETVKIVLSE 197
>gi|297734950|emb|CBI17184.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 193/527 (36%), Positives = 268/527 (50%), Gaps = 130/527 (24%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLL-QDHGERDMIRLAFSPDHLIYSLINEAKM 59
MD E+T+ V++RIQ L+PEN SKI+GY+LL QDHGE++MIRLAF P+ L+++LI +AK
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 KLGLGKPTVSP--------PISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDP 111
+LG+ T S PIS + LP F+P+S+ PVS + +R+ S
Sbjct: 61 QLGILSNTPSTPTSPSPFNPISKPT--RLPTNNG-FNPSSSWPVSGFSDLRSPNS----- 112
Query: 112 QMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSV--NSDFSSSYF 169
T A Q+ + L + S N SD +S F
Sbjct: 113 ----------------------TTA-------QLSYAALHRRSYSFNDACYGSDDGASGF 143
Query: 170 YPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNA 229
+P C YF +GFCK+GN C++ HG F+ S A
Sbjct: 144 GWKP---------------------CLYFARGFCKNGNTCKFLHG-----GFAD--SVEA 175
Query: 230 NDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYE-KYGKTLQAEGYLTE 288
+ + V SPG L+ E E+ +QR +++AS M Y K + E
Sbjct: 176 SSAASAAIVGSPGKLDGFEQEMLRSQQQR----LAVASQLMAGLNFPYNKCMNFFMQQNE 231
Query: 289 SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSD------PG 342
+QR A ++++ E++ K+ E++D G
Sbjct: 232 TQRSAAA-------------------------ALMMGEELHKFGRCRPERNDFSGMGLGG 266
Query: 343 GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQ 402
+ GSRQIYLTFPA+STF E+DVSNYFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK
Sbjct: 267 AVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKL 326
Query: 403 ILAKGNPHFVCGARVLVKPYREKSRLVDRK------------YVEKMQHPMFCSLHFTDG 450
ILAKGNPHFVC +RVLVKPY+EK ++ ++K +E+ ++ S D
Sbjct: 327 ILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQQQQQQLERGEYSTCSSPSGIDP 386
Query: 451 DT--ELHTMPRACNNSR--LLRKQLMEEHE--QAIELERRRLSEMQL 491
+LH R N++ LLR++L E+ + QAIEL+ RRL +QL
Sbjct: 387 REPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIELQGRRLMNLQL 433
>gi|302810669|ref|XP_002987025.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
gi|300145190|gb|EFJ11868.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
Length = 197
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 158/214 (73%), Gaps = 17/214 (7%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
K C Y+++GFCKHG++CR+ H H I + SP SLERL+ E+
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDH----------------ITGDGSSPSPSSLERLDRELQ 44
Query: 253 ELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRL 312
ELL R P+SIA+LP +YYE++G+ LQAEGYLTESQRHGK+GY+LT+LL++LK SI +
Sbjct: 45 ELLSSRTS-PVSIAALPQLYYERFGRPLQAEGYLTESQRHGKSGYNLTRLLSKLKGSITV 103
Query: 313 IDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSK 372
IDRPHGQH+V+LAED K+ ++GE D G+ SRQIYLTFPAES+F+E DVS +F
Sbjct: 104 IDRPHGQHAVVLAEDAHKFATFAGEHYDLSGVNPSSRQIYLTFPAESSFSEDDVSIHFRA 163
Query: 373 FGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
+GPVQDVRIP QQKRMFGFVTFV+ ETVK +L++
Sbjct: 164 YGPVQDVRIPFQQKRMFGFVTFVYPETVKIVLSE 197
>gi|356542909|ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 704
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 196/552 (35%), Positives = 276/552 (50%), Gaps = 99/552 (17%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +A+ +
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLGKPTVSPPISPASVADL----------PLQFAPFSPASTRPV-SSPASMRAAASP-- 107
LGL + P +P S + L PA T P SS +M +P
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNLNTSSRLSGTNIPPALTIPNPSSWPTMSELQTPDD 120
Query: 108 FWDPQ-MAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFL----------TLEDQFDS 156
P + S+ F G SD E F LQ+Q+ FL + ++ D
Sbjct: 121 LMSPNHLVVGSSTSSLSLPFYANGGSDPIDE-FQLQDQLAFLNDGSPTSTALSHKNNPDM 179
Query: 157 VNSVNSDFSSS-------YFYPEPALGHVRTSRRSPSLPE-----------FPVKVCHYF 198
NSD SSS +P G RRS S+ + K C YF
Sbjct: 180 FYPSNSDLSSSPTTAADPTLFPSYGWGG-SLHRRSCSVNDACLGTEDPNSGLGWKPCLYF 238
Query: 199 NKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQR 258
+G+CK+G +CR+ HG + + SP+ ++ + H ELL+ +
Sbjct: 239 ARGYCKNGTSCRFLHGGLGDADAAMVGSPSKIEMMEQCH---------------ELLRSK 283
Query: 259 RGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHG 318
G + L A L S + + LL + +N +
Sbjct: 284 SG---------------QQQRLAAASQLMASSTFPYSPKCMNFLLQQQQNDTQRA----A 324
Query: 319 QHSVILAEDVPKYLEYSGEKSD-----PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKF 373
+++++ED+ K+ E++D PG + SRQIYLTFPA+STF E+DVSNYFS +
Sbjct: 325 AAALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIY 384
Query: 374 GPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKY 433
GPVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPHFVC ARVLVKPY+EK ++ D+
Sbjct: 385 GPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDK-- 442
Query: 434 VEKMQHPMFCSLHFTDGDT----------ELHTMPRACNNSR--LLRKQLMEEHE--QAI 479
K+Q F+ T +L R N++ L R++L E+ + QA+
Sbjct: 443 YRKLQQQQVDRGDFSPCGTPTGLDARDQFDLQLGGRMFYNTQDMLWRRKLEEQADLQQAL 502
Query: 480 ELERRRLSEMQL 491
EL+ RRL +QL
Sbjct: 503 ELQSRRLMGLQL 514
>gi|224104191|ref|XP_002313352.1| predicted protein [Populus trichocarpa]
gi|222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 280/574 (48%), Gaps = 128/574 (22%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T V++RIQ LEPEN SKI+GYLLLQD+GE++MIRLAF P+ L+ +LI + K +
Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60
Query: 61 LGLGKPTVSPPISPA---SVADLPLQFAP------------------------FSPASTR 93
LG T S P SPA S PL + SP ST
Sbjct: 61 LGFPSNTPSTP-SPAFIPSSRPSPLYISSSRIPNNNGFDITNSSSPSTNSWPLLSPNSTT 119
Query: 94 P------VSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTA---AEDFCLQNQ 144
V+ +++ A ++PF P ++ S F +D A +++ LQ +
Sbjct: 120 SLSYASVVNGASNINAGSTPFQ-PTVSL-------SKAFSYSNNNDNANDLVDEYELQER 171
Query: 145 MQFLT---LEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPE-----------F 190
FL +D FD + PA G +RS S+P F
Sbjct: 172 FSFLNDSKTDDLFDPRGELA--------MSPPAFGDNSLHKRSFSVPGMCFGSEDSNSGF 223
Query: 191 PVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAE 250
K C YF++GFCK+G CR+ HG S ++ I V SP L E +
Sbjct: 224 GWKPCLYFSRGFCKNGTGCRFVHGD----------SADSAAI-----VGSPSELNEFE-Q 267
Query: 251 ITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSI 310
E+L+ + + K A ++ G K + L
Sbjct: 268 CQEILRSKAA-------------AQQRKLAAASQFMA-----GATFLPQNKCMNFLHQQQ 309
Query: 311 RLIDRPHGQHSVILAEDVPKYLEYSGEKSD------PGGIVAGSRQIYLTFPAESTFTEQ 364
R ++++ +++ K+ E+SD G + +RQIYLTFPA+STF E+
Sbjct: 310 NESQRSAAAAALMMGDEIHKFGRIRPERSDFSQMGLGGAMSPSARQIYLTFPADSTFREE 369
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
DVS+YFS +GPVQDVRIP QQKRMFGFVTFVFAETVK ILAKGNPHFVC +RVLVKPY+E
Sbjct: 370 DVSSYFSFYGPVQDVRIPYQQKRMFGFVTFVFAETVKLILAKGNPHFVCDSRVLVKPYKE 429
Query: 425 KSRLVDRKY-----VEKMQHP-------MFCSLHFTDGDTELHTMPRACNNSR-LLRKQL 471
K ++ D+K+ +E+ ++ + C F +LH R N++ +LR++L
Sbjct: 430 KGKVPDKKHQQQQQIEREEYSACPSPSRINCREPF-----DLHLGGRMFYNTQEMLRRKL 484
Query: 472 MEEHE--QAIEL-ERRRLSEMQLACKPMNHHSYF 502
EE + QAIEL ERR L+ L K H YF
Sbjct: 485 EEEADLQQAIELQERRLLNLQLLDLKNHRQHRYF 518
>gi|125559631|gb|EAZ05167.1| hypothetical protein OsI_27364 [Oryza sativa Indica Group]
Length = 721
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 301/647 (46%), Gaps = 113/647 (17%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLGKPTVSPPISPASV-ADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQ 119
LGL S P +P SV A +PF + + +
Sbjct: 61 LGL--LPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFS 118
Query: 120 QVNSI-------------EFVQPGY----------SDTAAEDFCLQNQMQFLT------- 149
+ NSI E + P D ++ LQ+Q+ FL
Sbjct: 119 RNNSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAG 178
Query: 150 ----LEDQFDSVNSVNSD---FSSSYFYPEPALGHVRTSRRSPSLPEFPV--------KV 194
+ D + + D FS + + GH RRS S+ E + K
Sbjct: 179 HQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGH----RRSASVSELCLGGADGLGWKP 234
Query: 195 CHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL 254
C Y+ +G+CK+G+ CR+ HG +P+ + P+A + + +D + S +RL A
Sbjct: 235 CLYYARGYCKNGSACRFVHGG-LPDDAAGKMDPSAVEQQCQDFLIRSKS-QRLAAAA--- 289
Query: 255 LKQRRGFPI----SIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSI 310
FP S+ P + LQ + ESQR + L+ +
Sbjct: 290 ------FPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRA----AAAAALMLGGDEAH 339
Query: 311 RLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYF 370
+ + RP + + + P GSRQIYLTFPA+STF E+DVSNYF
Sbjct: 340 KFMGRPRLERADFASMMNP-----------------GSRQIYLTFPADSTFREEDVSNYF 382
Query: 371 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
S +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D
Sbjct: 383 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 442
Query: 431 RKYVEKMQHPMFCSLHFTDG-DT----ELHTMP------RACNNSRLLRKQ-----LMEE 474
+K + + F S G D ++H + N LLR++ E
Sbjct: 443 KKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAE 502
Query: 475 HEQAIELERRRLSEMQL-------ACKPMNHHSYFGYSMDELQVS-EAPAEQGDFPSAER 526
+QAIEL RRL +QL A P + F S + E+P + G+
Sbjct: 503 LQQAIELHSRRLMGLQLLDFKSRAAAAPTPIGNPFSASQTAANATGESPPDSGELGKGSG 562
Query: 527 FNYLLDVLNNGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGS 572
F NG+ E+ S+ D D S NLP+SPFASP S
Sbjct: 563 FLLAHKKAVNGADKEESTGESSSPNTDSDQSVEHNLPDSPFASPTKS 609
>gi|33146675|dbj|BAC80021.1| putative DAZ associated protein 1 [Oryza sativa Japonica Group]
Length = 682
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 301/647 (46%), Gaps = 113/647 (17%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLGKPTVSPPISPASV-ADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQ 119
LGL S P +P SV A +PF + + +
Sbjct: 61 LGL--LPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFS 118
Query: 120 QVNSI-------------EFVQPGY----------SDTAAEDFCLQNQMQFLT------- 149
+ NSI E + P D ++ LQ+Q+ FL
Sbjct: 119 RNNSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAG 178
Query: 150 ----LEDQFDSVNSVNSD---FSSSYFYPEPALGHVRTSRRSPSLPEFPV--------KV 194
+ D + + D FS + + GH RRS S+ E + K
Sbjct: 179 HQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGH----RRSASVSELCLGGADGLGWKP 234
Query: 195 CHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL 254
C Y+ +G+CK+G+ CR+ HG +P+ + P+A + + +D + S +RL A
Sbjct: 235 CLYYARGYCKNGSACRFVHGG-LPDDAAGKMDPSAVEQQCQDFLIRSKS-QRLAAAA--- 289
Query: 255 LKQRRGFPI----SIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSI 310
FP S+ P + LQ + ESQR + L+ +
Sbjct: 290 ------FPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRA----AAAAALMLGGDEAH 339
Query: 311 RLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYF 370
+ + RP + + + P GSRQIYLTFPA+STF E+DVSNYF
Sbjct: 340 KFMGRPRLERADFASMMNP-----------------GSRQIYLTFPADSTFREEDVSNYF 382
Query: 371 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
S +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D
Sbjct: 383 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 442
Query: 431 RKYVEKMQHPMFCSLHFTDG-DT----ELHTMP------RACNNSRLLRKQ-----LMEE 474
+K + + F S G D ++H + N LLR++ E
Sbjct: 443 KKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAE 502
Query: 475 HEQAIELERRRLSEMQL-------ACKPMNHHSYFGYSMDELQVS-EAPAEQGDFPSAER 526
+QAIEL RRL +QL A P + F S + E+P + G+
Sbjct: 503 LQQAIELHSRRLMGLQLLDFKSRAAAAPTPIGNPFSASQTAANATGESPPDSGELGKGSG 562
Query: 527 FNYLLDVLNNGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGS 572
F NG+ E+ S+ D D S NLP+SPFASP S
Sbjct: 563 FLLAHKKAVNGADKEESTGESSSPNTDSDQSVEHNLPDSPFASPTKS 609
>gi|115474123|ref|NP_001060660.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|122166929|sp|Q0D3J9.1|C3H53_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 53;
Short=OsC3H53
gi|113612196|dbj|BAF22574.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|215767061|dbj|BAG99289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767076|dbj|BAG99304.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 682
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 210/652 (32%), Positives = 302/652 (46%), Gaps = 121/652 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLGKPTVSPPISPASV-ADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQ 119
LGL S P +P SV A +PF + + +
Sbjct: 61 LGL--LPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFS 118
Query: 120 QVNSI-------------EFVQPGY----------SDTAAEDFCLQNQMQFLT------- 149
+ NSI E + P D ++ LQ+Q+ FL
Sbjct: 119 RNNSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAG 178
Query: 150 ----LEDQFDSVNSVNSD---FSSSYFYPEPALGHVRTSRRSPSLPEFPV--------KV 194
+ D + + D FS + + GH RRS S+ E + K
Sbjct: 179 HQMPMFDGGECRSPGGGDGGLFSYNLGWANGGPGH----RRSASVSELCLGGADGLGWKP 234
Query: 195 CHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL 254
C Y+ +G+CK+G+ CR+ HG +P+ + P+A + + +D + S +RL A
Sbjct: 235 CLYYARGYCKNGSACRFVHGG-LPDDAAGKMDPSAVEQQCQDFLIRSKS-QRLAAAA--- 289
Query: 255 LKQRRGFPI----SIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSI 310
FP S+ P + LQ + ESQR + L+ +
Sbjct: 290 ------FPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRA----AAAAALMLGGDEAH 339
Query: 311 RLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYF 370
+ + RP + + + P GSRQIYLTFPA+STF E+DVSNYF
Sbjct: 340 KFMGRPRLERADFASMMNP-----------------GSRQIYLTFPADSTFREEDVSNYF 382
Query: 371 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
S +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D
Sbjct: 383 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 442
Query: 431 RKYVEKMQHPMFCSLHFTDGDT----------ELHTMP------RACNNSRLLRKQ---- 470
KY + QH + F+ T ++H + N LLR++
Sbjct: 443 -KY--RKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQ 499
Query: 471 -LMEEHEQAIELERRRLSEMQL-------ACKPMNHHSYFGYSMDELQVS-EAPAEQGDF 521
E +QAIEL RRL +QL A P + F S + E+P + G+
Sbjct: 500 QQAAELQQAIELHSRRLMGLQLLDFKSRAAAAPTPIGNPFSASQTAANATGESPPDSGEL 559
Query: 522 PSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGS 572
F NG+ E+ S+ D D S NLP+SPFASP S
Sbjct: 560 GKGSGFLLAHKKAVNGADKEESTGESSSPNTDSDQSVEHNLPDSPFASPTKS 611
>gi|449451727|ref|XP_004143613.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Cucumis sativus]
Length = 733
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 278/575 (48%), Gaps = 127/575 (22%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+++ V++RIQ L+PEN SKI+G LL+QDHGE++MIRLAF P+ L++S+I +AK
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRP--------------VSSPASMR---- 102
L L P V+ P +P++ + P FA ST P +S P S+
Sbjct: 61 LSL--PAVNSPSTPSTPSSSPSPFA----LSTNPISISRQSSSSSRLGISLPLSLTIPSP 114
Query: 103 -AAASPFWDPQMAADQQQQVNSIEFVQPGY--------------SDTAAEDFCLQNQMQF 147
+++S W ++D Q + + PG + ++F LQ+Q+ F
Sbjct: 115 SSSSSVSWAAGFSSDLQTSDD--HLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSF 172
Query: 148 LTLEDQFDSVNSVNSDFSSSYFYP------------------EPALGHVRTSRRSPSLPE 189
L D ++ N+D F+P + G RRS S+ +
Sbjct: 173 LN--DGSPTIGVKNADL----FFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVND 226
Query: 190 -----------FPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQ--IFSPNANDIRNED 236
K C YF +GFCK+G +CR+ HG S + SP+ D+ +
Sbjct: 227 ACLGTEDLNCGLGWKPCLYFARGFCKNGTSCRFLHGGLGDSDVSAAAVGSPSKIDVMEQC 286
Query: 237 H--VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294
H + S S ++ A ++L+ FP S S+ + ++ +SQR
Sbjct: 287 HELLRSKSSAQQRLAAASQLMASANSFPYSPKSINFLLQQQQ----------NDSQRAAA 336
Query: 295 AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYS-------GEKSDPGGIVAG 347
A + L ++ ED+ K+ S G I
Sbjct: 337 AAAAAAAAL-------------------MMGEDLHKFSRSSRLERNEFSLNGSAGIINPA 377
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
SRQIYLTFPA+STF E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKG
Sbjct: 378 SRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKG 437
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG-DTE-----LHTMPRAC 461
NPHFVC ARVLVKPY+EK ++ D+ ++ F G D+ L R
Sbjct: 438 NPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 497
Query: 462 NNSR--LLRKQLMEEHE---QAIELERRRLSEMQL 491
NS LL ++ +EE + Q ++L+ RRL +QL
Sbjct: 498 YNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQL 532
>gi|449442555|ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 675
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 215/679 (31%), Positives = 311/679 (45%), Gaps = 149/679 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T VY +I+ LEPEN SKI+G+LL+QD G++++IRLAF P+ L++SLI +AK
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 LG------------------LGKPTVSPPISPAS----VADLPLQFAPFSPAST------ 92
LG + +P+ S P S +S L P SP++T
Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120
Query: 93 -------RPVSSPA----SMRAAASPFWDPQMAADQQQQVNSIEFVQPGY---------- 131
P SSP S+RAA PF P + V+S +P
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAA--PFSMPPFMQHKNGFVDSEVIEEPQVNEYLSFLNES 178
Query: 132 SDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDF-SSSYFYPEPALGHVRTSRRSPSLPEF 190
S + ED L++ S+++ ++ F SY + G F
Sbjct: 179 SSSRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGG--------F 230
Query: 191 PV--KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLE 248
V K C YF +GFCK+G+NC++ HG FS P+A + GS +LE
Sbjct: 231 GVGYKPCLYFARGFCKNGSNCKFLHG-----DFSDSVDPSAAIV---------GSPSKLE 276
Query: 249 AEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
L QR F M Y + L L + + LL +
Sbjct: 277 G----LFDQREEF--------MRYKAAQQQRLATASELMAGVSPSQYNKYINFLLQQQNE 324
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTE 363
+ R ++++ ++ K+ E++D + A SRQIYLTFPA+STF +
Sbjct: 325 NHRAT-----AAALMMGDEYHKFGMSRSERNDFLALAAEKRNSASRQIYLTFPADSTFKD 379
Query: 364 QDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYR 423
+DVS YFSKFGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C +RVLVKPY+
Sbjct: 380 EDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNILAKGNPHFICESRVLVKPYK 439
Query: 424 EKSRLVDRKYVEKMQ-------HPMFCSLHFTDGDT-ELHTMPRAC-NNSR--LLRKQLM 472
EK ++ +++ + Q P D +L+ R NN++ +LR++L
Sbjct: 440 EKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLE 499
Query: 473 E--EHEQAIELERRRLSEMQL-----------------ACKPMNHHSYF----------- 502
E E +QA+EL+ RRL +QL C P++ S+
Sbjct: 500 EQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSIESHNQMNQNIFPPDF 559
Query: 503 -------GYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQD 555
G+ ++L + A + Q +F E ++ + G +ED + S
Sbjct: 560 INPEASEGHENNQLATNNAISTQQNFQLEENLCFIQSN-SGGKATED--GYNSELLEIHK 616
Query: 556 SQGLNLPESPFASPIGSGI 574
S LP+SPFASP S +
Sbjct: 617 SVEQVLPDSPFASPKKSAL 635
>gi|449476117|ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 46-like [Cucumis sativus]
Length = 675
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 215/679 (31%), Positives = 311/679 (45%), Gaps = 149/679 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T VY +I+ LEPEN SKI+G+LL+QD G++++IRLAF P+ L++SLI +AK
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 LG------------------LGKPTVSPPISPAS----VADLPLQFAPFSPAST------ 92
LG + +P+ S P S +S L P SP++T
Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120
Query: 93 -------RPVSSPA----SMRAAASPFWDPQMAADQQQQVNSIEFVQPGY---------- 131
P SSP S+RAA PF P + V+S +P
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAA--PFSMPPFMQHKNGFVDSEVIEEPQVNEYLSFLNES 178
Query: 132 SDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDF-SSSYFYPEPALGHVRTSRRSPSLPEF 190
S + ED L++ S+++ ++ F SY + G F
Sbjct: 179 SSSRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGG--------F 230
Query: 191 PV--KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLE 248
V K C YF +GFCK+G+NC++ HG FS P+A + GS +LE
Sbjct: 231 GVGYKPCLYFARGFCKNGSNCKFLHG-----DFSDSVDPSAAIV---------GSPSKLE 276
Query: 249 AEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
L QR F M Y + L L + + LL +
Sbjct: 277 G----LFDQREEF--------MRYKAAQQQRLATASELMAGVSPSQYNKYINFLLQQQNE 324
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTE 363
+ R ++++ ++ K+ E++D + A SRQIYLTFPA+STF +
Sbjct: 325 NHRAT-----AAALMMGDEYHKFGMSRSERNDFLALAAEKRNSASRQIYLTFPADSTFKD 379
Query: 364 QDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYR 423
+DVS YFSKFGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C +RVLVKPY+
Sbjct: 380 EDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKXILAKGNPHFICESRVLVKPYK 439
Query: 424 EKSRLVDRKYVEKMQ-------HPMFCSLHFTDGDT-ELHTMPRAC-NNSR--LLRKQLM 472
EK ++ +++ + Q P D +L+ R NN++ +LR++L
Sbjct: 440 EKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLE 499
Query: 473 E--EHEQAIELERRRLSEMQL-----------------ACKPMNHHSYF----------- 502
E E +QA+EL+ RRL +QL C P++ S+
Sbjct: 500 EQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSIESHNQMNQNIFPPDF 559
Query: 503 -------GYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQD 555
G+ ++L + A + Q +F E ++ + G +ED + S
Sbjct: 560 INPEASEGHENNQLATNNAISTQQNFQLEENLCFIQSN-SGGKATED--GYNSELLEIHK 616
Query: 556 SQGLNLPESPFASPIGSGI 574
S LP+SPFASP S +
Sbjct: 617 SVEQVLPDSPFASPKKSAL 635
>gi|15231090|ref|NP_190763.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|79314761|ref|NP_001030840.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|75337705|sp|Q9SV09.1|C3H46_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 46;
Short=AtC3H46
gi|4678924|emb|CAB41315.1| putative protein [Arabidopsis thaliana]
gi|23297746|gb|AAN13016.1| unknown protein [Arabidopsis thaliana]
gi|222422911|dbj|BAH19442.1| AT3G51950 [Arabidopsis thaliana]
gi|332645345|gb|AEE78866.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|332645346|gb|AEE78867.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
Length = 540
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 195/595 (32%), Positives = 271/595 (45%), Gaps = 147/595 (24%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL + SP Q SP + R +S+ A+ PF
Sbjct: 61 LGLMNCSRSP---------WSHQDELISPKNNRG----SSLNPASLPF------------ 95
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
Y++ L N + + D +NS ++DF S +
Sbjct: 96 ----------YANGGRSSRDLTNDFELM------DDMNSRSTDFLGSVHARSGSCVLDGL 139
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
S F C YF +GFCK+G +CR+ H D V S
Sbjct: 140 GYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSD-----------------GGADLVGS 182
Query: 241 PGSLERLEAE-ITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSL 299
P +E L + + L ++ +SLP + G LQ + QR A
Sbjct: 183 PSRIELLRSNSVPPRLAHHF---MTRSSLP--SFSTKGVNLQQ----NDVQRAAAA---- 229
Query: 300 TKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAE 358
+++ +++ K + E+ D + SRQIYLTFPA+
Sbjct: 230 ----------------------LMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPAD 267
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
S F E+DVSNYFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVL
Sbjct: 268 SRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVL 327
Query: 419 VKPYREKSRLVDR----KYVEKMQHPMFCSLHFTDGDTELHTMPRAC-------NNSR-- 465
VKPY+EK ++ D+ + E+ P T L + PR NN++
Sbjct: 328 VKPYKEKGKVPDKYRTNQTTERELSP-----------TGLDSSPRDVLGGRGFYNNTQDV 376
Query: 466 LLRKQLMEEHEQAIELERRRLSEMQL--------ACKPMNHHSYFGYSMDELQVSEAPAE 517
L R + EE +EL+ RRL +QL P N HS +S +
Sbjct: 377 LWRSKFEEE---ILELQSRRLMNLQLLDVKKHFQLNSPTNIHSPNPFSQSLISPRPLSVI 433
Query: 518 QGDFPSAERFNYLLDVLNNGST---SEDQVSHISTHYNDQDSQGLNLPESPFASP 569
+ ++ E+ GS+ S+D ++ D +LP+SPFASP
Sbjct: 434 KREYDGGEK--------GKGSSKEGSDDDTMNLPERLED------SLPDSPFASP 474
>gi|357119900|ref|XP_003561671.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Brachypodium distachyon]
Length = 673
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 219/659 (33%), Positives = 315/659 (47%), Gaps = 121/659 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P+ +KI+G L++QDHGE++MIRLAF P+ L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDEAAKIMGLLIIQDHGEKEMIRLAFGPESLLQTVMAKARRE 60
Query: 61 LGLGKPTVSP-----PISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFW--DPQM 113
LGL + SP P SP L Q + +P S P+S + A +P + + +
Sbjct: 61 LGLLSASSSPTSAPRPQSP--FQQLSRQNSGRAPPSPSPLSVSSPSSWAQAPVFSRNNGV 118
Query: 114 AADQQQQVNSIEFVQPGYSDTAA-----------EDFCLQNQMQFLT------------L 150
A + E + PG + AA +D LQ Q+ FL L
Sbjct: 119 APEDVAGAGEQELMSPGNNGAAASFFPRAGDALVDDLQLQEQLAFLNDGGGATMNHAHQL 178
Query: 151 EDQFDSVNSVN---SDFSSSYFYPEPALGHVRTSRRSPSLPE-------FPVKVCHYFNK 200
FD + + D S + Y LG RRS S E K C Y+ +
Sbjct: 179 GGTFDGGDCRSPGPGDGSGMFPY---GLGWAPGHRRSASANELFLGDNSLGWKPCLYYAR 235
Query: 201 GFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRG 260
GFCK+G++CR+ HG + + +P A + + H F L R +++ L G
Sbjct: 236 GFCKNGSSCRFVHGASLQDVDD---APVAEQQQQQCHDF----LLRYKSQ--RLGHPSHG 286
Query: 261 FPIS-IASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTK---LLARLKNSIRLIDRP 316
FP S SLP K L +L + Q + Y L +L + + + RP
Sbjct: 287 FPYSPTGSLP-GSPSSASKCLS---FLMQQQHNDNQRYLLAAAAMILGGGDEAHKFMGRP 342
Query: 317 HGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPV 376
+ D+ + ++P GSRQIYLTFPA+STF E+DVS YF +GPV
Sbjct: 343 R-----LDRTDLASMM------NNP-----GSRQIYLTFPADSTFREEDVSGYFRMYGPV 386
Query: 377 QDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEK 436
DVRIP QQKRMFGFVTFV ETV+ ILAKGNPHF+C ARVLVKPY+EK ++ D KY ++
Sbjct: 387 HDVRIPYQQKRMFGFVTFVLPETVRLILAKGNPHFICDARVLVKPYKEKGKVPD-KYRKQ 445
Query: 437 MQHPMF--CSL-HFTDGDT---ELHT----MPRACN--NSRLLRKQLME-----EHEQAI 479
Q F C+ + DG +LH MP+ N N ++R++ E E + A+
Sbjct: 446 QQQGDFSGCTTPNGLDGRADPFDLHQIGARMPQHSNSANEMMMRRKQEEDQQAAEFQHAV 505
Query: 480 ELERRRLSEMQ-----------------LACKPMNHHSYFGYSMDELQVSEAPAE----- 517
EL+ RRL +Q L PM + E V +P E
Sbjct: 506 ELQSRRLMGLQLLDLKSRAAAAATAGMALPTMPMANAFTASQQPGETTVVASPLESNEQI 565
Query: 518 QGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGL-NLPESPFASPIGSGIS 575
+G A N + S D+ +H + +D+ ++G NLPE PFASP S +
Sbjct: 566 KGSSVFAAESNAAPKEGVDKVESADEANHKTD--SDESARGEHNLPERPFASPTKSSTT 622
>gi|19423979|gb|AAL87320.1| unknown protein [Arabidopsis thaliana]
Length = 540
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 193/591 (32%), Positives = 268/591 (45%), Gaps = 139/591 (23%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL + SP Q SP + R +S+ A+ PF
Sbjct: 61 LGLMNCSRSP---------WSHQDELISPKNNRG----SSLNPASLPF------------ 95
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
Y++ L N + + D +NS ++DF S +
Sbjct: 96 ----------YANGGRSSRDLTNDFELM------DDMNSRSTDFLGSVHARSGSCVLDGL 139
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
S F C YF +GFCK+G +CR+ H D V S
Sbjct: 140 GYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSD-----------------GGADLVGS 182
Query: 241 PGSLERLEAE-ITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSL 299
P +E L + + L ++ +SLP + G LQ + QR A
Sbjct: 183 PSRIELLRSNSVPPRLAHHF---MTRSSLP--SFSTKGVNLQQ----NDVQRAAAA---- 229
Query: 300 TKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAE 358
+++ +++ K + E+ D + SRQIYLTFPA+
Sbjct: 230 ----------------------LMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPAD 267
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
S F E+DVSNYFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVL
Sbjct: 268 SRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVL 327
Query: 419 VKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRAC-------NNSR--LLRK 469
VKPY+EK ++ D+ + T L + PR NN++ L R
Sbjct: 328 VKPYKEKGKVPDKYRTNQTTVRELSP-------TGLDSSPRDVLGGRGFYNNTQDVLWRS 380
Query: 470 QLMEEHEQAIELERRRLSEMQL--------ACKPMNHHSYFGYSMDELQVSEAPAEQGDF 521
+ EE +EL+ RRL +QL P N HS +S + + ++
Sbjct: 381 KFEEE---ILELQSRRLMNLQLLDVKKHFQLNSPTNIHSPNPFSQSLISPRPLSVIKREY 437
Query: 522 PSAERFNYLLDVLNNGST---SEDQVSHISTHYNDQDSQGLNLPESPFASP 569
E+ GS+ S+D ++ D +LP+SPFASP
Sbjct: 438 DGGEK--------GKGSSKEGSDDDTMNLPERLED------SLPDSPFASP 474
>gi|414888141|tpg|DAA64155.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 652
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 305/646 (47%), Gaps = 131/646 (20%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGL------GKPTVSPPISPASVADLPLQFAPFSPASTRP-------------------- 94
LGL G PT + S L Q + A T P
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 ---VSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLT-- 149
VS+ A A A+ P A + F G + ++ LQ Q+ FL+
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPS----PFFAAG--EPLLDELQLQEQLAFLSDA 174
Query: 150 --------LEDQFDSVNSVNSDFSSSYFYPEPALGHVRTS---RRSPSLPEFPV------ 192
L D + + + D ++ F+P ALG RRS S+ E +
Sbjct: 175 AAGGHQLPLFDASECRSPGSGD--AAGFFPYGALGWANGGPGHRRSSSVSELCLGGADGL 232
Query: 193 --KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAE 250
K C Y+ +G+CK+G+ CR+ HG ++ +++ + +LE+ +
Sbjct: 233 GWKPCLYYARGYCKNGSACRFVHGGLTDDATAKMDT---------------ATLEQQCQD 277
Query: 251 ITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLL---ARLK 307
I K +R +A+ P Y T G + + + L+ LL +
Sbjct: 278 ILLRSKSQR-----LAAFP------YSPTGSVPGSPSAATK------CLSLLLHQQQQQN 320
Query: 308 NSIRLIDRPHGQHSVILAEDVPKYLEYSG-EKSDPGGIV-AGSRQIYLTFPAESTFTEQD 365
+ R+ ++ +D K++ +++D +V GSRQIYLTFPA+STF E+D
Sbjct: 321 ENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADLASLVNPGSRQIYLTFPADSTFREED 380
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
VSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK
Sbjct: 381 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 440
Query: 426 SRLVDRKYVEKMQHPMFCSLHFTDG------DTELHTMPRA------CNNSRLLRKQ--- 470
++ D+ +++Q F++G +LH + N LLR++
Sbjct: 441 GKVPDKYRKQQLQGERAVDF-FSNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEE 499
Query: 471 ----LMEEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAER 526
E +QA+EL+ RRL +QL +L+ +P+ G P
Sbjct: 500 QQQAAAAELQQAMELQSRRLMRLQLL---------------DLKPRASPSPIGSMPLGPT 544
Query: 527 FNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGS 572
+D + E S + + S NLP+SPFASP S
Sbjct: 545 -QRAVDSPPDSGREESSAGDASPNADSDQSAEHNLPDSPFASPTRS 589
>gi|297819906|ref|XP_002877836.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
gi|297323674|gb|EFH54095.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 270/595 (45%), Gaps = 148/595 (24%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL + SP Q SP + R +S+ A+ PF
Sbjct: 61 LGLMNCSRSP---------WSHQDELISPKNNRG----SSLNPASLPF------------ 95
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
Y++ L N + + D VNS SDF S +
Sbjct: 96 ----------YANGGRSSRDLTNDFELM------DDVNS-RSDFLGSVHARSGSCVLDGL 138
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
S F C YF +GFCK+G +CR+ H D V S
Sbjct: 139 GYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSD-----------------GGADLVGS 181
Query: 241 PGSLERLEAE-ITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSL 299
P +E L + + L ++ +SLP + G LQ + QR A
Sbjct: 182 PSRIELLRSNSVPPRLAHHF---MTRSSLP--SFSPKGVNLQQ----NDIQRAAAA---- 228
Query: 300 TKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAE 358
+++ +++ K + E+ D + SRQIYLTFPA+
Sbjct: 229 ----------------------LMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPAD 266
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
S F E+DVSNYFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVL
Sbjct: 267 SRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVL 326
Query: 419 VKPYREKSRLVDR----KYVEKMQHPMFCSLHFTDGDTELHTMPRAC-------NNSR-- 465
VKPY+EK ++ D+ + E+ P T L + PR NN++
Sbjct: 327 VKPYKEKGKVPDKYRTNQTTERELSP-----------TGLDSSPRDVLGGRGFYNNTQDV 375
Query: 466 LLRKQLMEEHEQAIELERRRLSEMQL--------ACKPMNHHSYFGYSMDELQVSEAPAE 517
L R + EE +EL+ RRL +QL P N HS +S +
Sbjct: 376 LWRSKFEEE---ILELQSRRLMNLQLLDVKKHFQLNSPTNIHSPNPFSQSLISPGPLSVI 432
Query: 518 QGDFPSAERFNYLLDVLNNGST---SEDQVSHISTHYNDQDSQGLNLPESPFASP 569
+ ++ E+ GS+ S+D ++ D +LP+SPFASP
Sbjct: 433 KREYEGGEK--------GKGSSKEGSDDDTMNLPERLED------SLPDSPFASP 473
>gi|302770004|ref|XP_002968421.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
gi|300164065|gb|EFJ30675.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
Length = 204
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 154/218 (70%), Gaps = 14/218 (6%)
Query: 189 EFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLE 248
E P K C YF KGFCK+G++CR+ H + +S D +D S +ERLE
Sbjct: 1 EDPPKPCMYFAKGFCKNGSSCRFIHDSALLQS----------DSPPKDQFLS---MERLE 47
Query: 249 AEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
++ ELL+ R+G PIS++SLP +Y+EKYG+ L+A+GY++ESQRH K Y+LTKLL++ +
Sbjct: 48 FQLQELLRSRKGVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPSYTLTKLLSKFQ- 106
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSN 368
S+ +++RPH QH+++LAEDVPKY + + + SRQIYLTFP +S F+E+DV+
Sbjct: 107 SVTVVERPHRQHALMLAEDVPKYSAHKVDLDECNDPSPCSRQIYLTFPCDSNFSEEDVAT 166
Query: 369 YFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
+F +GPV+DVRIP Q KRMFGFVTF +AETV+ ILA+
Sbjct: 167 HFRAYGPVEDVRIPTQHKRMFGFVTFTYAETVRMILAE 204
>gi|302767304|ref|XP_002967072.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
gi|300165063|gb|EFJ31671.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
Length = 502
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 284/595 (47%), Gaps = 133/595 (22%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E T+ +Y R+Q L+P +VSKIIGYLLLQD E+DM+R+A D L++S++++AK +
Sbjct: 1 MDPYELTRMLYARVQALDPRHVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL SP SP + D P APFS RP P A +D Q+ Q
Sbjct: 61 LGL-----SP--SPNAHFDHP---APFS----RPEHPPFHFGTA----FDHQL----QST 98
Query: 121 VNSIEFVQPGYSDTAAE-DFCLQNQMQFL---TLEDQFDSVNSVNSD-FSSSYFYPEPAL 175
+ + P ++ LQ Q + + +++D + + F + +FYPE
Sbjct: 99 YHLRDVYHPPLVNSHVPFQKQLQQQAELMNRPSIQDTYQHQPLFGAGVFPNDHFYPE-TF 157
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNN----------------CRYF-HGHPMP 218
+ +R + H +HG+ C Y+ GH
Sbjct: 158 AFLNRNRLKQQKQQQQKSDEHDLMLSLSEHGSPNSSSSSSNNSSHAWKPCVYYSRGHCKH 217
Query: 219 ESFSQ-IFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYG 277
S + + +PN+ I E+H + +LERLE EI ELL+ R+ P+ I+ LP MY+E++G
Sbjct: 218 GSGCRFLHTPNSLGI--EEHG-TESALERLELEIQELLRARKS-PVPISLLPQMYFEEFG 273
Query: 278 KTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGE 337
L +G + RL +S L RP+GQ +V+L
Sbjct: 274 SALHVDG--------KPIDLLSSPSCMRLTSSSLL--RPNGQQAVVL------------- 310
Query: 338 KSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFA 397
IYLTFPAES FTE+DV+ +FS +GPVQDVRIP QQKRMFGFVTF+ A
Sbjct: 311 -------------IYLTFPAESAFTEEDVNAHFSAYGPVQDVRIPYQQKRMFGFVTFIHA 357
Query: 398 ETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTM 457
ETVK ILA+GNPH+VCGARVLVKPYR+K + D+K ++
Sbjct: 358 ETVKTILAEGNPHYVCGARVLVKPYRDKVKYTDKKNADQQSR------------------ 399
Query: 458 PRACNNSRLLRKQLMEEHEQAIELE---RRRLSEMQLACKPMNHHSYFGYSMDELQVSEA 514
NN+ L K L E +Q + E ++RL E + LQ +
Sbjct: 400 -NVRNNTDLASKLLEESMQQQQQRENYLQQRLVEFR------------------LQAVDK 440
Query: 515 PAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQD--SQGLNLPESPFA 567
P + + N +N G ED +H T +++++ S+ + PE+PFA
Sbjct: 441 PQDGATDVLLKETN-----INLGYILEDDDTHRKTSHSNRNTYSRAASFPENPFA 490
>gi|224072821|ref|XP_002303898.1| predicted protein [Populus trichocarpa]
gi|222841330|gb|EEE78877.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 298/642 (46%), Gaps = 135/642 (21%)
Query: 26 IGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLGLGKPT-----VSPPISPASVADL 80
+G LL+QDHGE++MIRLAF P+ L++S+I +A+ +LGL PT S P S +
Sbjct: 1 MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSPTNLSTSPSSPSPLYSSNPI 60
Query: 81 PLQFAPFSPASTRPVSSPASMRAAAS-----------PFWDPQMAADQQQQVN--SIEF- 126
+ S S + P S+ P D M + +N S+ F
Sbjct: 61 AISRQNSSSTSRLGFNIPPSLAIPNPSSNNSSSWSDLPNPDDLMISPNDSSLNPASVPFY 120
Query: 127 ---VQPGYSDTAAEDFCLQNQMQFLTLEDQ-------------FDSVNSVNSDFSSSYFY 170
V+ G SD E F LQ+Q+ FL Q D+++S + S S +
Sbjct: 121 ANGVRGGESDLMDE-FQLQDQLSFLNDNSQNLGPKSSDLFYPQLDALSSP-TGASDSMMF 178
Query: 171 PEPALGHVRTSRRSPSLPE----------FPVKVCHYFNKGFCKHGNNCRYFHGHPMP-E 219
P G V RRS S+ + F + C YF +G+CK+G+NCR+ HG +
Sbjct: 179 PSYWGGSVH--RRSCSVSDVLGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGELD 236
Query: 220 SFSQIFSPNAN---DIRNEDHVF---SPGSLERLEAEITELLKQRRGFPISIASLPMMYY 273
+ SPN+N D+ ++ H +RL A + FP S S+
Sbjct: 237 GAGVVGSPNSNNKIDMMDQCHELLRSKSAHQQRLAAASQLMSSSAASFPYSPKSM----- 291
Query: 274 EKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLE 333
+L + Q++ + T L+ + ED+ K+
Sbjct: 292 ----------NFLLQQQQNDSQRAAATALM--------------------MGEDMHKFGR 321
Query: 334 YSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVT 393
+++D + SRQIYLTFPA+STF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT
Sbjct: 322 SRLDRNDL--VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVT 379
Query: 394 FVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKY----VEKMQ-HPMFCSLHFT 448
FV+ ETVK ILAKGNPHFVC ARVLVKPY+EK ++ D+K VE+ + P
Sbjct: 380 FVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQVERGEFSPCGTPTGLD 439
Query: 449 DGDT-ELHTMPRACNNSR--LLRKQLMEEHE--QAIELERRRLSEMQLACKPMNHH---- 499
D +L R N++ L R++L E+ + QA+EL+ RRL +QL +HH
Sbjct: 440 SRDPFDLQLGARMFYNTQDMLWRRKLEEQADLQQALELQSRRLMSLQLLDVKKHHHRALS 499
Query: 500 ------------SYFGYSM------------DELQVSEAPAEQGDFPSAERFNYLLDVLN 535
+ F +S+ E S PA P ++ +
Sbjct: 500 NGSPVPSPTHSPNIFNHSLAFPPLHSSTEVPQENCSSSMPATSVTAPPEKQISNATSGKE 559
Query: 536 NGSTSEDQVSHISTHYNDQDSQGL---NLPESPFASPI-GSG 573
S+ E+ S+H D D Q NLP+SPFASP G+G
Sbjct: 560 YTSSEENGSGKESSHGEDSDLQESLEHNLPDSPFASPTKGTG 601
>gi|302774330|ref|XP_002970582.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
gi|300162098|gb|EFJ28712.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
Length = 205
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 150/218 (68%), Gaps = 13/218 (5%)
Query: 189 EFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLE 248
E P K C YF KGFCK+G++CR+ H + +S D +D S +ERLE
Sbjct: 1 EDPPKPCMYFAKGFCKNGSSCRFIHDSALLQS----------DSPPKDQFLS---MERLE 47
Query: 249 AEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
++ ELL+ R+G PIS++SLP +Y+EKYG+ L+A+GY++ESQRH K GY+LTKLL+ L +
Sbjct: 48 FQLQELLRSRKGVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPGYTLTKLLSNLYH 107
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSN 368
RPH QH+++LAEDVPKY + + + SRQIYLTFP +S F+E+DV+
Sbjct: 108 FFLSFPRPHRQHALMLAEDVPKYSAHKVDLDECNDPSPCSRQIYLTFPCDSNFSEEDVAT 167
Query: 369 YFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
+F +GPV+DVRIP Q KRMFGFVTF +AETV+ ILA+
Sbjct: 168 HFRAYGPVEDVRIPTQHKRMFGFVTFTYAETVRMILAE 205
>gi|75328302|sp|Q84ZT0.1|C3H51_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
51; Short=OsC3H51
gi|27817837|dbj|BAC55605.1| RRM-containing protein-like [Oryza sativa Japonica Group]
Length = 513
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 156/243 (64%), Gaps = 29/243 (11%)
Query: 195 CHY-FNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITE 253
CH+ F +G+CK G NC++FHG +PE + N V SL +L+ EI E
Sbjct: 182 CHFHFFRGYCKKGVNCQFFHG-SVPE------------LHNPRQVHPFASLSKLDMEIRE 228
Query: 254 LLKQRRGFP--ISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIR 311
LL G P +++ LP MY+EKYGK L+ +G+LTESQ+HG+ G SLT LL L N+IR
Sbjct: 229 LLI---GIPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGL-NTIR 284
Query: 312 LIDRPHGQHSVILAEDVPKY------LEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
+++R HGQ+ V+L ED K L +S D G GS QIY+TFP S FT+ D
Sbjct: 285 VVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTG---TGSNQIYMTFPVHSKFTDDD 341
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
V NYF +FGPV VRIP Q+KRMFGFV+F++ ETV+ IL+KG HF+CG RVLVK Y EK
Sbjct: 342 VENYFKQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEK 401
Query: 426 SRL 428
S L
Sbjct: 402 SEL 404
>gi|414888140|tpg|DAA64154.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 486
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 249/493 (50%), Gaps = 95/493 (19%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGL------GKPTVSPPISPASVADLPLQFAPFSPASTRP-------------------- 94
LGL G PT + S L Q + A T P
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 ---VSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLT-- 149
VS+ A A A+ P A + F G + ++ LQ Q+ FL+
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPS----PFFAAG--EPLLDELQLQEQLAFLSDA 174
Query: 150 --------LEDQFDSVNSVNSDFSSSYFYPEPALGHVRTS---RRSPSLPEFPV------ 192
L D + + + D ++ F+P ALG RRS S+ E +
Sbjct: 175 AAGGHQLPLFDASECRSPGSGD--AAGFFPYGALGWANGGPGHRRSSSVSELCLGGADGL 232
Query: 193 --KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAE 250
K C Y+ +G+CK+G+ CR+ HG ++ +++ +LE+ +
Sbjct: 233 GWKPCLYYARGYCKNGSACRFVHGGLTDDATAKM---------------DTATLEQQCQD 277
Query: 251 ITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLL---ARLK 307
I K +R +A+ P Y T G + + + L+ LL +
Sbjct: 278 ILLRSKSQR-----LAAFP------YSPTGSVPGSPSAATK------CLSLLLHQQQQQN 320
Query: 308 NSIRLIDRPHGQHSVILAEDVPKYLEYSG-EKSDPGGIV-AGSRQIYLTFPAESTFTEQD 365
+ R+ ++ +D K++ +++D +V GSRQIYLTFPA+STF E+D
Sbjct: 321 ENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADLASLVNPGSRQIYLTFPADSTFREED 380
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
VSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK
Sbjct: 381 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 440
Query: 426 SRLVDRKYVEKMQ 438
++ D+ +++Q
Sbjct: 441 GKVPDKYRKQQLQ 453
>gi|255544930|ref|XP_002513526.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547434|gb|EEF48929.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 686
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 268/570 (47%), Gaps = 123/570 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T + ++I+ ++PEN SKI+GY+L+QD E D++ LAF + L++++I +AK
Sbjct: 1 MDTYEATNILMSKIKSIDPENASKIMGYILIQDLNENDLLSLAFGSETLLHNVIIKAKTH 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFS-PA-------------------------STRP 94
LGL T++ P SP LP P S PA S P
Sbjct: 61 LGLSTNTLTTPSSP-----LPSPLNPISRPANNHSPFSTQSSSSPRVGTPFVDFAKSPSP 115
Query: 95 VSSPASMRA-------AASPFWDPQMAADQQQQVNSIEFVQP--------GYSDTAAEDF 139
S PAS A + SP P ++ D + +++ V P G D +
Sbjct: 116 HSWPASGLANNNNGITSISPKSSPFLSYDNIRSGSAL--VPPSATANGGNGSGDVSRNST 173
Query: 140 CLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALG---------HVRTSRRSPSLPEF 190
L N+ Q D + S DF P LG H+ R S S F
Sbjct: 174 DLLNEYQLDEYFSFLDDLPSKGEDFGD----PRAQLGGFSMNNVDNHIHRRRFSESDACF 229
Query: 191 PV---------KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSP 241
+ C YF +GFCK+G NC++ HG F
Sbjct: 230 GTEDGGFGIGYRPCLYFARGFCKNGENCKFVHGG-----------------------FGA 266
Query: 242 G-SLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300
G ++ + G P + L + E + A+ + QR Y +
Sbjct: 267 GENIGDVSGGGGGGGGLLVGSPREMEGLYLQQQEDMMRMKAAQ----QQQRLAYNKY-MN 321
Query: 301 KLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIV------AGSRQIYLT 354
LL + +S R+ G SV++ ++ K ++ E++D + + SRQIYLT
Sbjct: 322 FLLQQESDSQRI-----GPASVMMGDEFHKIGQFRPERNDFLAMAMEEKANSASRQIYLT 376
Query: 355 FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
FPA+STF ++DVSNYFS FGPVQDVRIP QQKRMFGFVTFV ++TVK IL++GNPHF+C
Sbjct: 377 FPADSTFKDEDVSNYFSHFGPVQDVRIPYQQKRMFGFVTFVHSDTVKLILSRGNPHFICD 436
Query: 415 ARVLVKPYREKSRLVDRKYVEKMQHPM----FCSLHFTDGDT-----ELHTMPRACNNSR 465
+RVLVKPY+EK ++ +++ + Q M F G +LH R NS+
Sbjct: 437 SRVLVKPYKEKGKVTNKRQQQLQQQLMDRGNFSPCSSPSGLDPRELYDLHLGARMLYNSQ 496
Query: 466 --LLRKQLMEEHE--QAIELERRRLSEMQL 491
+LR++L ++ E QAIEL+ RRL +QL
Sbjct: 497 EMMLRRKLEQQAELQQAIELQGRRLINLQL 526
>gi|125600867|gb|EAZ40443.1| hypothetical protein OsJ_24897 [Oryza sativa Japonica Group]
Length = 432
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/252 (48%), Positives = 156/252 (61%), Gaps = 38/252 (15%)
Query: 195 CHY-FNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITE 253
CH+ F +G+CK G NC++FHG +PE + N V SL +L+ EI E
Sbjct: 138 CHFHFFRGYCKKGVNCQFFHG-SVPE------------LHNPRQVHPFASLSKLDMEIRE 184
Query: 254 LLKQRRGFP--ISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIR 311
LL G P +++ LP MY+EKYGK L+ +G+LTESQ+HG+ G SLT LL L N+IR
Sbjct: 185 LLI---GIPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGL-NTIR 240
Query: 312 LIDRPHGQHSVILAEDVPKY------LEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
+++R HGQ+ V+L ED K L +S D G GS QIY+TFP S FT+ D
Sbjct: 241 VVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTG---TGSNQIYMTFPVHSKFTDDD 297
Query: 366 VSNYFS---------KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
V NYF +FGPV VRIP Q+KRMFGFV+F++ ETV+ IL+KG HF+CG R
Sbjct: 298 VENYFKYCLNFIVTRQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLR 357
Query: 417 VLVKPYREKSRL 428
VLVK Y EKS L
Sbjct: 358 VLVKRYMEKSEL 369
>gi|356497343|ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 646
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 273/559 (48%), Gaps = 119/559 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+T V ++I+ +PEN SKI+GYLL+ + E ++IR+A SPD ++ +L+ K
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLM-NLEESELIRVACSPDTVLQTLVLRVKSH 59
Query: 61 LGL--------------------------------GKPT-----VSPPISPAS---VADL 80
LGL G PT P SP+S +
Sbjct: 60 LGLTLSTPSSPSQFPPSPLNPIARLTGTSSNPFSRGGPTNGFDFTRNPASPSSHSHAWNF 119
Query: 81 PLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAAD----QQQQVNSIEFVQPGYSDTAA 136
P P SP ST P+ S ++RA + P++ D +QQVN E+ P +D++
Sbjct: 120 P-NNNPISPKST-PLLSYDNIRALS-----PRVNGDCDFVDEQQVN--EYF-PFLNDSSK 169
Query: 137 EDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCH 196
+ + +++ + S +S SY + G + P K C
Sbjct: 170 NEDLVDPRLELGVGAQNWHSGDS--HLHRRSYSASDVGFGCDEAA------PGLGYKPCL 221
Query: 197 YFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLK 256
YF +GFCK+G NC++ HG F+ + + I V SP LE +E + E ++
Sbjct: 222 YFARGFCKNGTNCKFLHG---------AFTDSLDAI-----VGSPSKLEGME-QREEFVR 266
Query: 257 QRRGFPISIASLP-MMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDR 315
+ IAS P EKY + L + ESQR A + + + DR
Sbjct: 267 FKAPQLQRIASGPSAAAREKYYEFL-----MQESQR-AAAAFMMGEEFYNFG-----WDR 315
Query: 316 PHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGP 375
P + + LA SGEK + + SRQIYLTFPAESTF ++DVS YFSKFGP
Sbjct: 316 P--ERNDFLAA-------ISGEKPN-----SASRQIYLTFPAESTFKDEDVSEYFSKFGP 361
Query: 376 VQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVE 435
VQDVRIP QQKRMFGFVTFV+ ETV+ IL+KGNPHF+C +RVLVKPY+EK ++ D++ +
Sbjct: 362 VQDVRIPYQQKRMFGFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQQQ 421
Query: 436 KMQH-------PMFCSLHFTDGDT-ELHTMPRACNNSR--LLRKQLMEEHE--QAIELER 483
+ Q P F + + H R N LLR+++ E+ E Q +EL+
Sbjct: 422 QQQQLERGDLSPCLSPSGFGSKEPYDFHLGARMLYNPHDILLRRKIEEQAELQQVLELQE 481
Query: 484 RRLSEMQL---ACKPMNHH 499
RRL +QL P++HH
Sbjct: 482 RRLKNLQLPDFKNNPIHHH 500
>gi|125558949|gb|EAZ04485.1| hypothetical protein OsI_26636 [Oryza sativa Indica Group]
Length = 432
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 155/252 (61%), Gaps = 38/252 (15%)
Query: 195 CHY-FNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITE 253
CH+ F +G+CK G NC++FHG +PE + N V SL +L+ EI E
Sbjct: 138 CHFHFFRGYCKKGVNCQFFHG-SVPE------------LHNPRQVHPFASLSKLDMEIRE 184
Query: 254 LLKQRRGFP--ISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIR 311
LL G P +++ LP MY+EKYGK L +G+LTESQ+HG+ G SLT LL L N+IR
Sbjct: 185 LLI---GIPPPVAVDRLPSMYFEKYGKPLGPDGWLTESQQHGRTGCSLTSLLMGL-NTIR 240
Query: 312 LIDRPHGQHSVILAEDVPKY------LEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
+++R HGQ+ V+L ED K L +S D G GS QIY+TFP S FT+ D
Sbjct: 241 VVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTG---TGSNQIYMTFPVHSKFTDDD 297
Query: 366 VSNYFS---------KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
V NYF +FGPV VRIP Q+KRMFGFV+F++ ETV+ IL+KG HF+CG+R
Sbjct: 298 VENYFKYCLNFIVTRQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGSR 357
Query: 417 VLVKPYREKSRL 428
VLVK Y EK L
Sbjct: 358 VLVKRYMEKPEL 369
>gi|302755024|ref|XP_002960936.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
gi|300171875|gb|EFJ38475.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
Length = 523
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 35/246 (14%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
K C Y+++G CKHG+ CR+ H +PN+ I E+H + +LERLE EI
Sbjct: 205 KPCVYYSRGHCKHGSGCRFLH------------TPNSLGI--EEHG-TESALERLELEIQ 249
Query: 253 ELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRL 312
ELL+ R+ P+ I+ LP MY+E++G L +G+L + G LT LL +KN++ +
Sbjct: 250 ELLRARKS-PVPISLLPQMYFEEFGSALHVDGFLATPE--AVQGSGLTSLLCHMKNTL-V 305
Query: 313 IDRPHGQHSVILAEDVPKYL--EYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYF 370
ID+P+GQ +V+L E+ + + G+ D GI S FTE+DV+ +F
Sbjct: 306 IDQPNGQQAVVLVEESSRLAVAAHRGDNYDHNGI--------------SAFTEEDVNAHF 351
Query: 371 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
S +GPVQDVRIP QQKRMFGFVTF+ ETVK ILA+GNPH+VCGARVLVKPYR+K + D
Sbjct: 352 SAYGPVQDVRIPYQQKRMFGFVTFIHGETVKTILAEGNPHYVCGARVLVKPYRDKVKYTD 411
Query: 431 RKYVEK 436
+K ++
Sbjct: 412 KKNADQ 417
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 10/88 (11%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E T+ +Y R+Q L+P VSKIIGYLLLQD E+DM+R+A D L++S++++AK +
Sbjct: 1 MDPYELTRMLYARVQALDPRYVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFS 88
LGL SP SP + D P APFS
Sbjct: 61 LGL-----SP--SPNAHFDHP---APFS 78
>gi|297830802|ref|XP_002883283.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329123|gb|EFH59542.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 607
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 264/534 (49%), Gaps = 102/534 (19%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++ +I+ LEP+ SKIIGYLLLQD G RD++RLA PD L+ S+ +AK
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGTRDLMRLALGPDTLLQSVCLKAKSA 60
Query: 61 LGLGKPT----------VSPPI-------SPASVADLPLQFA---PFSPASTRPVSSPAS 100
LGL +S PI S +S + ++F+ P SP+ T P S ++
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSQSSPGNGFMEFSRNNPLSPSLTTPGSLGSN 120
Query: 101 MRAAASPFWDPQMAADQQQQVNSIEFVQPGYS---DTAAEDFCLQNQM-QFLTLEDQFDS 156
+SPF Q +S F G + T DF + Q+ +L+ +
Sbjct: 121 PNMISSPF-----------QASSSLFASDGGAAGDSTGNGDFLDEQQLGNYLSF---LNE 166
Query: 157 VNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNK-GFCKHGNNCRYFHGH 215
+S N+D S F G +RS S + C + GF G N R+ HG
Sbjct: 167 SSSKNNDESLDPFGFSADNGDAHLHKRSFSASD----ACFGSEEPGFGGGGYN-RFPHGG 221
Query: 216 PMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL-LKQRRGFP----ISIASLPM 270
+D + SP + R + E+ + + QR+ ++ PM
Sbjct: 222 L------------GDDFDSPGGFGSPDYVSRQQEEMVRMKMAQRQRMAAAQYLAATGSPM 269
Query: 271 MYYEKYGKTL-QAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVP 329
Y + L Q + + + ++G+ GY P G+H +
Sbjct: 270 SYEKGLNFLLHQRNVHRSGAGQYGEEGY--------------WFGSP-GRH------ERD 308
Query: 330 KYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMF 389
+++ G+KS+ + S+QIYLTFPA+S+FT++DVSNYF FGPVQDVRIP QQKRMF
Sbjct: 309 EFMGM-GDKSN-----SASKQIYLTFPADSSFTDEDVSNYFGTFGPVQDVRIPYQQKRMF 362
Query: 390 GFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTD 449
GFVTFV +ETV+ ILA+GNPHF+C +RVLVKPY+EK R+++++ +++ M +F+
Sbjct: 363 GFVTFVHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERG-NFSP 421
Query: 450 GDT----------ELHTMPRACNNSR--LLRKQLMEEHEQAIELERRRLSEMQL 491
G + E PR +N++ + RK + +QAIE +RRR +QL
Sbjct: 422 GSSPSGMDSRDLFESLLSPRMFSNTQEMMRRKAEQADLQQAIEFQRRRFLNLQL 475
>gi|11994270|dbj|BAB01453.1| unnamed protein product [Arabidopsis thaliana]
Length = 591
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 257/530 (48%), Gaps = 98/530 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++ +I+ LEP+ SKIIGYLLLQD G+ D++RLA P+ L+ S+ +AK
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGLGKPTVSPPISPASVADLPLQF----------------APFSPASTRPVSSPASMRAA 104
LGL S SP + P+ P SP+ P S ++
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFATPGSLGSNPNMI 120
Query: 105 ASPFWDPQMAADQQQQVNSIEFVQPGYS---DTAAEDFCLQNQM-QFLTLEDQFDSVNSV 160
+SPF Q +S F G + T DF + Q+ +L+ + +S
Sbjct: 121 SSPF-----------QASSSLFASDGAAAGDSTGNGDFLDEQQLGNYLSF---LNESSSK 166
Query: 161 NSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNK-GFCKHGNNCRYFHGHPMPE 219
N+D S F G +RS S + C + GF G N R+ HG
Sbjct: 167 NNDESLDPFGFSADNGDAHLHKRSFSASD----ACFGSEEPGFGGGGYN-RFLHGGL--- 218
Query: 220 SFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL-LKQRRGFP----ISIASLPMMYYE 274
+D + SP + R + EI + + QR+ ++ PM Y +
Sbjct: 219 ---------GDDFDSPGGFGSPDYVSRQQEEIVRMKMAQRQRMAAAQYLAATGSPMSYEK 269
Query: 275 KYGKTL-QAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLE 333
L Q + + + + G+ GY P G+H + +++
Sbjct: 270 GLNFLLHQRNAHRSGAGQFGEEGY--------------WFGSP-GRH------ERDEFMG 308
Query: 334 YSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVT 393
G+KS+ + S+QIYLTFPA+S+FT++DVSNYF FGPVQDVRIP QQKRMFGFVT
Sbjct: 309 M-GDKSN-----SASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVT 362
Query: 394 FVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT- 452
F+ +ETV+ ILA+GNPHF+C +RVLVKPY+EK R+++++ +++ M +F+ G +
Sbjct: 363 FLHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERG-NFSPGSSP 421
Query: 453 ---------ELHTMPRACNNSR--LLRKQLMEEHEQAIELERRRLSEMQL 491
+ H PR +N++ + RK + +QAIE +RRR +QL
Sbjct: 422 SGMDSRDLFDSHLAPRMFSNTQEMMRRKAEQADLQQAIEFQRRRFLSLQL 471
>gi|79313317|ref|NP_001030738.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642940|gb|AEE76461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 602
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 257/530 (48%), Gaps = 98/530 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++ +I+ LEP+ SKIIGYLLLQD G+ D++RLA P+ L+ S+ +AK
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGLGKPTVSPPISPASVADLPLQF----------------APFSPASTRPVSSPASMRAA 104
LGL S SP + P+ P SP+ P S ++
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFATPGSLGSNPNMI 120
Query: 105 ASPFWDPQMAADQQQQVNSIEFVQPGYS---DTAAEDFCLQNQM-QFLTLEDQFDSVNSV 160
+SPF Q +S F G + T DF + Q+ +L+ + +S
Sbjct: 121 SSPF-----------QASSSLFASDGAAAGDSTGNGDFLDEQQLGNYLSF---LNESSSK 166
Query: 161 NSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNK-GFCKHGNNCRYFHGHPMPE 219
N+D S F G +RS S + C + GF G N R+ HG
Sbjct: 167 NNDESLDPFGFSADNGDAHLHKRSFSASD----ACFGSEEPGFGGGGYN-RFLHGGL--- 218
Query: 220 SFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL-LKQRRGFP----ISIASLPMMYYE 274
+D + SP + R + EI + + QR+ ++ PM Y +
Sbjct: 219 ---------GDDFDSPGGFGSPDYVSRQQEEIVRMKMAQRQRMAAAQYLAATGSPMSYEK 269
Query: 275 KYGKTL-QAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLE 333
L Q + + + + G+ GY P G+H + +++
Sbjct: 270 GLNFLLHQRNAHRSGAGQFGEEGY--------------WFGSP-GRH------ERDEFMG 308
Query: 334 YSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVT 393
G+KS+ + S+QIYLTFPA+S+FT++DVSNYF FGPVQDVRIP QQKRMFGFVT
Sbjct: 309 M-GDKSN-----SASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVT 362
Query: 394 FVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT- 452
F+ +ETV+ ILA+GNPHF+C +RVLVKPY+EK R+++++ +++ M +F+ G +
Sbjct: 363 FLHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERG-NFSPGSSP 421
Query: 453 ---------ELHTMPRACNNSR--LLRKQLMEEHEQAIELERRRLSEMQL 491
+ H PR +N++ + RK + +QAIE +RRR +QL
Sbjct: 422 SGMDSRDLFDSHLAPRMFSNTQEMMRRKAEQADLQQAIEFQRRRFLSLQL 471
>gi|356540386|ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 658
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 268/568 (47%), Gaps = 124/568 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+T V ++I+ +PEN SKI+GYLL+ + E ++IRLA SPD ++++L+ K
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLM-NLEESELIRLACSPDPVLHTLVLRVKNH 59
Query: 61 LG-----------------LGKPTV------SPPISPASVADLPLQFA------------ 85
L PT S P S F
Sbjct: 60 LSGLTLSSTTPSSPSLPPSPLNPTARLTAISSNPFSRGGGPTNGFDFTRNHPSSPSSHSH 119
Query: 86 --------PFSPASTRPVSSPASMRAAASPFWDPQMAADQ------QQQVNSIEFVQPGY 131
P SP ST P+ S ++RA + P++ D +QQVN E+ P
Sbjct: 120 AWNFPNNNPISPKST-PLFSYDNIRALS-----PRVVNDDCGDFVDEQQVN--EYF-PFL 170
Query: 132 SDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFP 191
+D++ + + +++F + S +S + SY + G + +P L
Sbjct: 171 NDSSKNEDLVDPRLEFGVGAQNWHSGDS-HLQHRRSYSASDVGFGCDEAAAAAPGLG--- 226
Query: 192 VKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEI 251
K C YF +GFCK+G NC++ HG F+ + + I V SP ++LE
Sbjct: 227 YKPCLYFARGFCKNGTNCKFLHG---------AFTDSLDAI-----VGSPS--KQLEG-- 268
Query: 252 TELLKQRRGFPISIASLPMMYYEKYGKTLQA-----EGYLTESQRHGKAGYSLTKLLARL 306
++QR F + P + G + A E + ESQR A + + +
Sbjct: 269 ---MEQREEF-VRFNKAPQLQRIASGPSAAAREKYFEFLIQESQRLAAAAFIMGEEFYNF 324
Query: 307 KNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDV 366
D+P + + LA S EKS+ + S+QIYLTFPAESTF ++DV
Sbjct: 325 G-----WDKP--ERNDFLAA-------ISSEKSN-----SASQQIYLTFPAESTFKDEDV 365
Query: 367 SNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
S YFSKFGPVQDVRIP QQKRMFGFVTFV+ ETV+ IL+KGNPHF+C +RVLVKPY+EK
Sbjct: 366 SEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKG 425
Query: 427 RLVDRKYVEKMQ-------HPMFCSLHFTDGDT-ELHTMPRACNNSR--LLRKQLMEEHE 476
++ D++ + Q P F + + H R N LLR+++ E+ E
Sbjct: 426 KVPDKRQQHQQQQLERGDLSPCLSPSGFGSKEPYDFHLGARMLYNPHDVLLRRKIEEQAE 485
Query: 477 --QAIELERRRLSEMQL---ACKPMNHH 499
Q EL+ RRL +QL P++HH
Sbjct: 486 LQQVRELQERRLKNLQLPDFKNNPIHHH 513
>gi|296085121|emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 213/445 (47%), Gaps = 97/445 (21%)
Query: 190 FPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEA 249
F K C YF +G+CK+G +CR+ HG +S S + S A V SP +E +E
Sbjct: 148 FGWKPCLYFARGYCKNGTSCRFLHGG---DSASVVGSEGAA------MVGSPSKIEMME- 197
Query: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309
+ ELL+ K+ Q + SQ A + +
Sbjct: 198 QCHELLRS--------------------KSAQQQRLAAASQIMASASFPYSAKCMNFLLQ 237
Query: 310 IRLIDRPHGQHSVILAEDVPKYLEYSGEKSD-----PGGIVAGSRQIYLTFPAESTFTEQ 364
+ D ++++ +D+ K+ E+ + G + GSRQIYLTFPA+STF E+
Sbjct: 238 QQQTDSQRAAAALMMGDDMHKFGRSRLERGEFMNGGAGMVNPGSRQIYLTFPADSTFREE 297
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
DVSNYFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC ARVLVKPY+E
Sbjct: 298 DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKE 357
Query: 425 KSRLVDRK------YVEKMQHPMFCSLHFTDGDT--ELHTMPRACNNSR--LLRKQLMEE 474
K ++ D+K VE+ + + D +L R N++ L R++L E+
Sbjct: 358 KGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQ 417
Query: 475 HE--QAIELERRRLSEMQLA-CKPMNHH----------------SYFGYSM---DELQVS 512
+ QAIEL+ RRL +QL K HH S+F + +
Sbjct: 418 ADLQQAIELQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQPLILPSDRSSP 477
Query: 513 EAPAEQGDFP--------------------SAERFNYLLDVLNNGSTSEDQVSHISTHYN 552
EAP E P +AE+ +D NG+ E S+H
Sbjct: 478 EAPEENCSSPATAIPVNAVAAEQQQQTVTTAAEKEFTGIDENGNGTGKE------SSHNE 531
Query: 553 DQD---SQGLNLPESPFASPI-GSG 573
D D S NLP+SPFASP G+G
Sbjct: 532 DSDLPESLEHNLPDSPFASPTKGAG 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 53/63 (84%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+PEN SKI+G LL+QDHGE++MIRLAF P+ L++S+I +A+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>gi|255544928|ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547433|gb|EEF48928.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 700
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 194/390 (49%), Gaps = 73/390 (18%)
Query: 150 LEDQFDSVNSVNSDFSSSYFYPE-------PALGHVRTSRRSPSLPEF-----------P 191
L+D F +N +D F P A G RRS S+P
Sbjct: 181 LQDHFSFLNDSKTD---ELFDPRLDLAMSPTAYGDTHLHRRSFSVPGLCFGSEDANSGLG 237
Query: 192 VKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEI 251
K C YF +GFCK+G +CR+ HG + + V SP L E +
Sbjct: 238 WKPCLYFARGFCKNGTSCRFLHGGESGDGATL--------------VGSPSKLSEFE-QC 282
Query: 252 TELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIR 311
ELL+ + K A ++T A + K + L
Sbjct: 283 QELLRS------------KAAAAQQQKLAAASQFMT------GASFPYNKCMNLLLQQQN 324
Query: 312 LIDRPHGQHSVILAEDVPKYLEYSGEKSD------PGGIVAGSRQIYLTFPAESTFTEQD 365
R ++++ E++ K+ E++D G + GSRQIYLTFPA+STF E+D
Sbjct: 325 DTQRSAAAAALMMGEELHKFGRCRPERNDFSAMGLGGAMNPGSRQIYLTFPADSTFREED 384
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
VSNYFS +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVLVKPY+EK
Sbjct: 385 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEK 444
Query: 426 SRLVDRKY---VEKMQHPMFCSLHFTDG-DT----ELHTMPRACNNSR--LLRKQLMEEH 475
++ D+K ++M+ + + G D+ +LH R N++ LLR++L E+
Sbjct: 445 GKVPDKKQPHQQQQMERGDYSACSSPSGLDSREPFDLHLGARMFQNTQEMLLRRKLEEQA 504
Query: 476 E--QAIELERRRLSEMQLA-CKPMNHHSYF 502
E QAIEL+ RRL +QL K NHH +
Sbjct: 505 ELQQAIELQGRRLMNLQLLDFKNHNHHQFL 534
>gi|413957281|gb|AFW89930.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 433
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 222/517 (42%), Gaps = 144/517 (27%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD +E R++++EPEN SKI+G +LL++ +DM++ L Y E K
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQ-------LAYGNDAEVHAK 53
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
+ K + ++ S SSPA +W P Q
Sbjct: 54 ISHAKAMLDAIVACCS-------------------SSPA----FGYHYWPPVPNKAQ--- 87
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL----- 175
AE++ LQ Q + Y+ E AL
Sbjct: 88 ---------------AEEYALQPQ----------------HYSGGGCYYASENALIYNGG 116
Query: 176 GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
G R+ S P CHYF KG CK+G +C Y H R E
Sbjct: 117 GPPRSRLSSTRRP------CHYFIKGICKNGQSCHYSHH------------------RQE 152
Query: 236 DHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKA 295
V S G+LE+LE EI ELLK R G P+SIASLP +Y
Sbjct: 153 AQVCS-GALEKLELEIIELLKSRHGQPLSIASLPTLYG---------------------- 189
Query: 296 GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTF 355
DRPHGQH V+LAED +Y E G + + S Q+YLTF
Sbjct: 190 ------------------DRPHGQHYVVLAEDAGRYKELMSRGERGGDMGSSSHQVYLTF 231
Query: 356 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
P+ESTF E+DV+NYF +G V+DVRIP Q+KRMFGFV+F ETV IL PHF+ +
Sbjct: 232 PSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFHNPETVNTILTMRIPHFIGES 291
Query: 416 RVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLL---RKQLM 472
RVLVK Y EKS+ ++R ++ F + + +R++ +++L+
Sbjct: 292 RVLVKRYIEKSKCIERYRPRALRR--FVGMDMDMDMNDDDDDYDDQPPARMVMRNQQRLL 349
Query: 473 EEHEQAIELERRRLSEMQLACKPMNH-HSYFGYSMDE 508
++ IELER+R A P + H YF S+ +
Sbjct: 350 ATEKRLIELERKRF----FAMPPQQYQHVYFDCSIGD 382
>gi|413955827|gb|AFW88476.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 687
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 141/256 (55%), Gaps = 31/256 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 366 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 425
Query: 407 GNPHFVCGARVLVKPYREKSRLVDR-KYVEKMQHPMFCSLHFTDGDT------ELHTMP- 458
GNPHF+C ARVLVKPY+EK ++ D+ ++ K Q F G +LH +
Sbjct: 426 GNPHFICDARVLVKPYKEKGKVPDKCRHALKPQQGDFSGCTTPTGGLDGGYPFDLHQLGG 485
Query: 459 -----RACNNSRLLRKQLMEEHEQAIELERRRLSEMQL------------ACKPMNHHSY 501
+ N LLR++L EE +QAIEL+ RRL +QL + P
Sbjct: 486 RMLQHSSSANELLLRRKL-EEQQQAIELQSRRLMGLQLLDLKARAAAAAASPLPTPIGDA 544
Query: 502 FGYSMDELQV---SEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQG 558
F S S +P E G R + L+ NG E+ S D D G
Sbjct: 545 FASSQPVSTTAVESPSPPESGQQLLKLRSGFALEGKVNGGDKEESAREASPDAADSDQSG 604
Query: 559 L--NLPESPFASPIGS 572
NLP+SPFASP S
Sbjct: 605 GEHNLPDSPFASPTKS 620
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 67/268 (25%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAP----------------------FSPASTRPVSS- 97
LGL P P S A+ P P +PA +R S+
Sbjct: 61 LGLLLPAS--PTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPAFSRSNSTS 118
Query: 98 ----------------PASMRAAASPFWDPQMA---ADQQQQVNSIEFVQPGYSDTAAED 138
P+ + A+PF+ Q D Q + F+ G ++ A
Sbjct: 119 NGTGTAEEAAGAGEELPSPVNGGAAPFFPHQSGDALLDDLQLQEQLAFLNEGSANPA--- 175
Query: 139 FCLQNQM-QFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPV----- 192
+Q+ F+ E + + F+ +P H RRS S+ EF +
Sbjct: 176 ----HQLPGFVGGECRSPGPGDASGMFAFGLGWPNGGPAH----RRSSSVNEFCLGGGGG 227
Query: 193 ------KVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G +CR+ HG
Sbjct: 228 GDGFGWKPCLYYARGFCKNGGSCRFVHG 255
>gi|224114163|ref|XP_002332416.1| predicted protein [Populus trichocarpa]
gi|222832369|gb|EEE70846.1| predicted protein [Populus trichocarpa]
Length = 598
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 174/335 (51%), Gaps = 68/335 (20%)
Query: 127 VQPGYSDTAAEDFCLQNQMQFLT-------------LEDQFDSVNSVNSDFSSSYFYPEP 173
V+ G ++F LQ+Q+ FL Q D+++S + S S +P
Sbjct: 149 VRGGGESDLMDEFQLQDQLSFLNDNSANLGPKSSDLFYSQLDALSSP-TGASDSVMFPSY 207
Query: 174 ALGHVRTSRRSPSLPE----------FPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQ 223
G V RRS S+ + F + C YF +G+CK+G+NCR+ HG + ES
Sbjct: 208 WGGSVH--RRSCSVSDVLGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGG-LGESDGA 264
Query: 224 ---IFSPNAN---DIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYG 277
+ SPN N D+ ++ H L A+ L + S AS P Y K
Sbjct: 265 GVVVGSPNGNNKIDMMDQCHEL----LRSKSAQQQRLAAASQLMGGSAASFP--YSPK-- 316
Query: 278 KTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGE 337
S+ LL + +N D ++++ ED+ K+ +
Sbjct: 317 --------------------SMNFLLQQQQN-----DSQRAAAALMMGEDMHKFARSRLD 351
Query: 338 KSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFA 397
++D I SRQIYLTFPA+STF E+DVSNYFS +GPVQDVRIP QQKRMFGFVTF++
Sbjct: 352 RNDL--INPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFLYP 409
Query: 398 ETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRK 432
ETVK ILAKGNPHFVC ARVLVKPY+EK ++ D+K
Sbjct: 410 ETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKK 444
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 53/63 (84%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+PEN SKI+G LL+QDHGE++MIRLAF P+ L++S+I +A+ +
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>gi|413955828|gb|AFW88477.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 684
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 139/255 (54%), Gaps = 32/255 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 366 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 425
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT------ELHTMP-- 458
GNPHF+C ARVLVKPY+EK ++ D+ K Q F G +LH +
Sbjct: 426 GNPHFICDARVLVKPYKEKGKVPDK--CRKPQQGDFSGCTTPTGGLDGGYPFDLHQLGGR 483
Query: 459 ----RACNNSRLLRKQLMEEHEQAIELERRRLSEMQL------------ACKPMNHHSYF 502
+ N LLR++L EE +QAIEL+ RRL +QL + P F
Sbjct: 484 MLQHSSSANELLLRRKL-EEQQQAIELQSRRLMGLQLLDLKARAAAAAASPLPTPIGDAF 542
Query: 503 GYSMDELQV---SEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGL 559
S S +P E G R + L+ NG E+ S D D G
Sbjct: 543 ASSQPVSTTAVESPSPPESGQQLLKLRSGFALEGKVNGGDKEESAREASPDAADSDQSGG 602
Query: 560 --NLPESPFASPIGS 572
NLP+SPFASP S
Sbjct: 603 EHNLPDSPFASPTKS 617
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 67/268 (25%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAP----------------------FSPASTRPVSS- 97
LGL P P S A+ P P +PA +R S+
Sbjct: 61 LGLLLPAS--PTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPAFSRSNSTS 118
Query: 98 ----------------PASMRAAASPFWDPQMA---ADQQQQVNSIEFVQPGYSDTAAED 138
P+ + A+PF+ Q D Q + F+ G ++ A
Sbjct: 119 NGTGTAEEAAGAGEELPSPVNGGAAPFFPHQSGDALLDDLQLQEQLAFLNEGSANPA--- 175
Query: 139 FCLQNQM-QFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPV----- 192
+Q+ F+ E + + F+ +P H RRS S+ EF +
Sbjct: 176 ----HQLPGFVGGECRSPGPGDASGMFAFGLGWPNGGPAH----RRSSSVNEFCLGGGGG 227
Query: 193 ------KVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G +CR+ HG
Sbjct: 228 GDGFGWKPCLYYARGFCKNGGSCRFVHG 255
>gi|449464832|ref|XP_004150133.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Cucumis sativus]
Length = 482
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 204/440 (46%), Gaps = 95/440 (21%)
Query: 168 YFYPEPA--LGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIF 225
+FYP PA +G L P C Y+ KGFCK+G+ CR+FH
Sbjct: 33 FFYPAPASPVGGNWAEEGGLGLGWRP---CLYYAKGFCKNGSGCRFFH------------ 77
Query: 226 SPNANDIRNEDHVFSPGSLERLEAEITE------LLKQRRGFPISIASLPMMYYEKYGKT 279
S + AEI E LL+ G + + + Y T
Sbjct: 78 -----------------SGDGGRAEIVEECNDVVLLRSNSGVQQRMGVGSVNGFFPYSPT 120
Query: 280 LQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKS 339
+E L + Q + + + NS R + E+S
Sbjct: 121 TASELLLQQQQNEMRRAVAGLSMGEESNNSGR----------------------FRLERS 158
Query: 340 DPGGIVAG---SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVF 396
D G G +RQIYLTFPAES F E+DVS YFS +GPVQDVRIP QQKRMFGFVTFV+
Sbjct: 159 DFSGGGMGNPAARQIYLTFPAESCFKEEDVSKYFSIYGPVQDVRIPYQQKRMFGFVTFVY 218
Query: 397 AETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR-KYVEKMQH----PMFCSLHFTDGD 451
AETVK ILAKGNPHFVC +RVLVKPY+EK ++ D+ + ++M+ P D
Sbjct: 219 AETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKFRKQQQMERGDLSPCGTPTGLDSRD 278
Query: 452 T-ELHTMPRACNNSR--LLRKQLMEEHE--QAIELERRRLSEMQLAC--KPMNHHSYFGY 504
+LH R NS+ L R++L E+ + QA+EL+ R+ +QLA KP++HH+
Sbjct: 279 LHDLHHGARMYYNSQDMLWRRKLEEQADLQQALELQALRVMSLQLADVRKPLHHHTPL-- 336
Query: 505 SMDELQVSEAPAEQGDFPSAERFNYLL---------------DVLNNGSTSEDQVSHIST 549
S S P Q F S + LL V+NN + D S
Sbjct: 337 STCSPIPSPNPFNQTLFHSIPTNSQLLQENGSNHLPEIRVEPQVMNNFDLTADSDSSNGK 396
Query: 550 HYNDQD-SQGLNLPESPFAS 568
+ Q+ S NLP+SPFAS
Sbjct: 397 ETDLQETSLEHNLPDSPFAS 416
>gi|226507390|ref|NP_001152488.1| nucleic acid binding protein [Zea mays]
gi|195656755|gb|ACG47845.1| nucleic acid binding protein [Zea mays]
Length = 653
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 139/238 (58%), Gaps = 30/238 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 362 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 421
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG------DTELHTMPRA 460
GNPHF+C ARVLVKPY+EK ++ D+ +++Q F++G +LH +
Sbjct: 422 GNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDF-FSNGLDGRENHLDLHQLGAR 480
Query: 461 ------CNNSRLLRKQLMEEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEA 514
N LLR++L EE +QA+EL+ RRL +QL +L+ +
Sbjct: 481 MLQHSHSANEMLLRRKL-EEQQQAMELQSRRLMGLQLL---------------DLKPRAS 524
Query: 515 PAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGLNLPESPFASPIGS 572
P+ G+ P +D + E S + + + S NLP+SPFASP S
Sbjct: 525 PSPIGNMPLGPT-QRAVDSPPDSGREESSAGDASPNADSEQSAEHNLPDSPFASPTRS 581
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 58/264 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGL------GKPTVSPPISPASVADLPLQFAPFSPASTRP-------------------- 94
LGL G PT + S L Q + A T P
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 ---VSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLT-- 149
VS+ A A A+ P A + F G + ++ LQ Q+ FL+
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPS----PFFAAG--EPLLDELQLQEQLAFLSDA 174
Query: 150 --------LEDQFDSVNSVNSDFSSSYFYPEPALGHVRTS---RRSPSLPEFPV------ 192
L D + + + D ++ F+P ALG RRS S+ E +
Sbjct: 175 AAGGHQLPLFDASECRSPGSGD--AAGFFPYGALGWANGGPGHRRSSSVSELCLGGADGL 232
Query: 193 --KVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +G+CK+G+ CR+ HG
Sbjct: 233 GWKPCLYYARGYCKNGSACRFVHG 256
>gi|224054504|ref|XP_002298293.1| predicted protein [Populus trichocarpa]
gi|222845551|gb|EEE83098.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 192/379 (50%), Gaps = 72/379 (18%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
+ C YF +GFCK+G +C++ HG E+ +++ A V SP +E L +
Sbjct: 240 RQCLYFARGFCKNGESCKFGHGD---ENMAEVNVGGA-------LVSSPREMEELYLQQQ 289
Query: 253 ELLKQRRGF-----------PISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTK 301
E + +R+ + + Y K+ L + E++R G A
Sbjct: 290 EEMMKRKAVQQQQEEMMKMKAVQQQQQQRLAYNKHMNFLLLQ--QNEAERFGAA------ 341
Query: 302 LLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTF 361
+ + R G + LA + EK++ + SRQIYLTFPA+S+F
Sbjct: 342 ---MMGDEFYKFGRTRGGRNDFLAMGM-------AEKAN-----SASRQIYLTFPADSSF 386
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 421
++DVSNYFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK+ILAKGNPH++C +RVLVKP
Sbjct: 387 KDEDVSNYFSSFGPVQDVRIPYQQKRMFGFVTFVYPETVKEILAKGNPHYICESRVLVKP 446
Query: 422 YREKSRLVDR--KYVEK-----MQHPM------FCSLHFTDGDTELHTMPRACNNSRLLR 468
Y+EK ++ +R + +E+ P C LH G L+ P +LR
Sbjct: 447 YKEKGKVANRTQQLLERGGFSPASSPSGFDPRELCDLHL--GARMLYNTPEM-----MLR 499
Query: 469 KQLMEEHE--QAIELERRRLSEMQLACKPMNHHSYFGYSMD-----ELQVSEAPAEQGDF 521
++L E+ E QAIEL+ RRL +QL +H + +S+ L P Q D
Sbjct: 500 RKLEEQAELQQAIELQGRRLINLQLPDLRGDHAHHHQHSLSVGAPISLPTHHTPINQTDI 559
Query: 522 PSAERFNYLLDVLNNGSTS 540
+++ N + + +NG+ S
Sbjct: 560 LTSDGKNEIT-LEDNGNCS 577
>gi|357481341|ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355512291|gb|AES93914.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 685
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 173/327 (52%), Gaps = 43/327 (13%)
Query: 190 FPVKVCHYFNKGFCKHGNNCRYFHGHPM-PESFSQIFSPNANDIRNEDHVFSPGSLERLE 248
F K C YF +GFCK+G+NC++ HG + S + + SP + + R +
Sbjct: 235 FGFKPCLYFARGFCKNGSNCKFVHGDSIDANSGAVVGSPKFEGLEQHEEFM------RFK 288
Query: 249 AEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
A + + ++ + Y+KY L + +++QR A + +
Sbjct: 289 A-AQQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQH--SDNQR---AVAAAAFAMGEEYF 342
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSN 368
+I RP + + SG+K + + SRQIYLTFPAESTF ++DVS
Sbjct: 343 NITGRGRPERNEFLAMV---------SGDKPN-----SASRQIYLTFPAESTFKDEDVSE 388
Query: 369 YFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRL 428
YFSKFGPVQDVRIP QQKRMFGFVTFVF ETV+ IL+KGNPHF+C +RVLVKPY+EK ++
Sbjct: 389 YFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKV 448
Query: 429 VDRKYVEKMQH-------PMFCSLHFTDGDT-ELHTMPRACNNSR--LLRKQLME---EH 475
D+++ + Q P F + + H R N LLR+++ E +
Sbjct: 449 PDKRHQHQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKIEEQAADF 508
Query: 476 EQAIELERRRLSEMQL---ACKPMNHH 499
+Q +EL+ RRL +QL P++HH
Sbjct: 509 QQVLELQERRLKSLQLPDFKNNPIHHH 535
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+T V +++ +PEN SKI+G+LL+ + E +++RLA PDH++++L K
Sbjct: 1 MGSYEATNVVLAKVKNFDPENASKIMGFLLM-NLEEYELVRLACCPDHVLHNLAIRVKTH 59
Query: 61 LG--LGKPTVSPPISP 74
LG L P+ P++P
Sbjct: 60 LGMNLSTPSSPSPLNP 75
>gi|414866608|tpg|DAA45165.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 675
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 141/255 (55%), Gaps = 31/255 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 363 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 422
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----ELHTMP---- 458
GNPHF+C ARVLVKPY+EK ++ D+ ++ C+ D +LH +
Sbjct: 423 GNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFSGCTTPTGGLDARDPFDLHQLGARML 482
Query: 459 --RACNNSRLLRKQLME-----EHEQAIELERRRLSEMQL-------------ACKPMNH 498
N LLR++L E E + AIEL+ RRL +QL P+ +
Sbjct: 483 QHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATASALPTPIAN 542
Query: 499 HSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQG 558
+ + + V E+P E G+ + LD NG E+ S D D G
Sbjct: 543 AFASSHPLSTMAV-ESPLESGEQLKLSS-GFALDGKLNGGDKEESACEASPDAADSDQSG 600
Query: 559 L-NLPESPFASPIGS 572
NLP+SPFASP S
Sbjct: 601 EHNLPDSPFASPTKS 615
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 66/267 (24%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAP----------------------FSPASTRPVSS- 97
LGL P + P S A+ P P +P +R S+
Sbjct: 61 LGLLLP--ASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWSHAPVFSRSNSTS 118
Query: 98 --------------PASMRAAASPFWDPQMAA----DQQQQVNSIEFVQPGYSDTAAEDF 139
P+ + A+PF+ P+ A D Q + F+ G + A
Sbjct: 119 NGTAEEAAGAGEELPSPVNGGAAPFF-PRQAGDALLDDLQLQEQLAFLNEGGGNPA---- 173
Query: 140 CLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPV------- 192
+ F E + + F+ + H RRS S+ E +
Sbjct: 174 --HQLLGFDGGECRSPGPGDADGMFAFGLGWHNGGPAH----RRSSSVNELCLGGGGGGG 227
Query: 193 -----KVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G +CR+ HG
Sbjct: 228 DGFGWKPCLYYARGFCKNGGSCRFVHG 254
>gi|414866607|tpg|DAA45164.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 356
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 143/256 (55%), Gaps = 31/256 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 44 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 103
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----ELHT----MP 458
GNPHF+C ARVLVKPY+EK ++ D+ ++ C+ D +LH M
Sbjct: 104 GNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFSGCTTPTGGLDARDPFDLHQLGARML 163
Query: 459 RACN--NSRLLRKQLME-----EHEQAIELERRRLSEMQL-------------ACKPMNH 498
+ N N LLR++L E E + AIEL+ RRL +QL P+ +
Sbjct: 164 QHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATASALPTPIAN 223
Query: 499 HSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQG 558
+ + + V E+P E G+ + LD NG E+ S D D G
Sbjct: 224 AFASSHPLSTMAV-ESPLESGEQLKLSS-GFALDGKLNGGDKEESACEASPDAADSDQSG 281
Query: 559 L-NLPESPFASPIGSG 573
NLP+SPFASP S
Sbjct: 282 EHNLPDSPFASPTKSA 297
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGE 36
MD E+TK V++RIQ L+P++ +KI+G LL+QD +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDRAD 36
>gi|414866609|tpg|DAA45166.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 317
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 143/256 (55%), Gaps = 31/256 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 5 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 64
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----ELHT----MP 458
GNPHF+C ARVLVKPY+EK ++ D+ ++ C+ D +LH M
Sbjct: 65 GNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFSGCTTPTGGLDARDPFDLHQLGARML 124
Query: 459 RACN--NSRLLRKQLME-----EHEQAIELERRRLSEMQL-------------ACKPMNH 498
+ N N LLR++L E E + AIEL+ RRL +QL P+ +
Sbjct: 125 QHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATASALPTPIAN 184
Query: 499 HSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQG 558
+ + + V E+P E G+ + LD NG E+ S D D G
Sbjct: 185 AFASSHPLSTMAV-ESPLESGEQLKLSS-GFALDGKLNGGDKEESACEASPDAADSDQSG 242
Query: 559 L-NLPESPFASPIGSG 573
NLP+SPFASP S
Sbjct: 243 EHNLPDSPFASPTKSA 258
>gi|147770113|emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 167/321 (52%), Gaps = 67/321 (20%)
Query: 314 DRPHGQHSVILAEDVPKYLEYSGEKSD-----PGGIVAGSRQIYLTFPAESTFTEQDVSN 368
D ++++ +D+ K+ E+ + G + GSRQIYLTFPA+STF E+DVSN
Sbjct: 320 DSQRAAAALMMGDDMHKFGRSRLERGEFMNGGAGMVNPGSRQIYLTFPADSTFREEDVSN 379
Query: 369 YFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRL 428
YFS FGPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC ARVLVKPY+EK ++
Sbjct: 380 YFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKV 439
Query: 429 VDRK------YVEKMQHPMFCSLHFTDGDT--ELHTMPRACNNSR--LLRKQLMEEHE-- 476
D+K VE+ + + D +L R N++ L R++L E+ +
Sbjct: 440 PDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQ 499
Query: 477 QAIELERRRLSEMQLA-CKPMNHH----------------SYFGYSM---DELQVSEAPA 516
QAIEL+ RRL +QL K HH S+F + + EAP
Sbjct: 500 QAIELQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQPLILPSDRSSPEAPE 559
Query: 517 EQGDFP--------------------SAERFNYLLDVLNNGSTSEDQVSHISTHYNDQD- 555
E P +AE+ +D NG+ E S+H D D
Sbjct: 560 ENCSSPATAIPVNAVAAEQQQQTVTTAAEKEFTGIDENGNGTGKE------SSHNEDSDL 613
Query: 556 --SQGLNLPESPFASPI-GSG 573
S NLP+SPFASP G+G
Sbjct: 614 PESLEHNLPDSPFASPTKGAG 634
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 53/63 (84%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V++RIQ L+PEN SKI+G LL+QDHGE++MIRLAF P+ L++S+I +A+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>gi|242051314|ref|XP_002463401.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
gi|241926778|gb|EER99922.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
Length = 702
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 206/437 (47%), Gaps = 87/437 (19%)
Query: 182 RRSPSLPEFPV--------KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIR 233
RRS S+ E + K C Y+ +G+CK+G+ CR+ HG +P+ + + +
Sbjct: 224 RRSSSVSELCLGGADGLGWKPCLYYARGYCKNGSACRFVHGG-LPDDATALAGAKMD--- 279
Query: 234 NEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLT------ 287
LE + ++L + + ++ A+ P Y G + T
Sbjct: 280 ----------TATLEQQCQDILLRSKSQRLAAAAFP---YSPTGSLPGSPSAATKCLSLL 326
Query: 288 ------ESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDP 341
E++RH A + L+ ++ + + RP + + + P
Sbjct: 327 LQQQQNENRRHAAA--AAAALMLGGDDAHKFLGRPRLDRADLASMMNP------------ 372
Query: 342 GGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVK 401
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK
Sbjct: 373 -----GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVK 427
Query: 402 QILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG-----DTELHT 456
ILAKGNPHF+C ARVLVKPY+EK ++ D+ +++Q + F++G +LH
Sbjct: 428 LILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGE---RVDFSNGLDARDHFDLHQ 484
Query: 457 MPRA------CNNSRLLRKQ------LMEEHEQAIELERRRLSEMQLA-CKPMNHHSYFG 503
+ N LLR++ E +QA+EL+ RRL +QL K + S G
Sbjct: 485 LGARMLQHSHSANEMLLRRKLEEQQQQAAELQQAMELQSRRLMGLQLLDLKTRSSPSPIG 544
Query: 504 YSMDELQ-----VSEAPAEQGDFPSAERFNYLLDVLN-----NGSTSEDQVSHISTHYND 553
+ E+P + G+ + L NG E+ S + +
Sbjct: 545 MPFSPTRAVASATVESPPDSGEHGPKGSSGFFLPQRGERPAVNGGDKEESAGDASPNADG 604
Query: 554 QDSQGLNLPESPFASPI 570
S NLP+SPFASP
Sbjct: 605 DQSAEHNLPDSPFASPT 621
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>gi|357121462|ref|XP_003562439.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 699
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 223/500 (44%), Gaps = 83/500 (16%)
Query: 126 FVQPGYSDTAAEDFCLQNQMQFLTLEDQ-------FDSVNS-VNSDFSSSYFYPEPALGH 177
F G ++ LQ+Q+ FL D+ FD S S + +P A G
Sbjct: 162 FFGGGGDSLVLDELHLQDQLAFLGGGDRQQQQLPLFDGGGSECRSPGGDAGVFPYGA-GW 220
Query: 178 VRTSRRSPSLPEF-----------PVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFS 226
RRS S+ E K C Y+ +G+CK+G+ CR+ HG FS +
Sbjct: 221 AHGHRRSASVSELCFGGGGGGDALGWKPCMYYARGYCKNGSACRFVHGG---GGFSDDLA 277
Query: 227 PNAND---IRNEDHVFSPGSLERLEAEITELLKQRRGFPIS----IASLPMMYYEKYGKT 279
D + + H F L R +++ + GFP S + P +
Sbjct: 278 GAKMDQAAVEQQCHDF----LLRSKSQ-----RLAGGFPYSPTGSLPGSPSAASKCLSLL 328
Query: 280 LQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKS 339
LQ ESQR A + L+ + + + R + P
Sbjct: 329 LQQHQQQNESQRAAAAAAAAAALMLGGDEAHKFMGRARLDRGDFASMMNP---------- 378
Query: 340 DPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAET 399
GSRQIYLTFPA+STF E+DVS YF+ +GPV DVRIP QQKRMFGFVTFV+ ET
Sbjct: 379 -------GSRQIYLTFPADSTFREEDVSTYFNIYGPVHDVRIPYQQKRMFGFVTFVYPET 431
Query: 400 VKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG-----DTEL 454
VK ILAKGNPHF+C ARVLVKPY+EK ++ D+ ++ + F S G +L
Sbjct: 432 VKLILAKGNPHFICDARVLVKPYKEKGKVPDKFRKQQGERMDFASCTSPTGLDARDPFDL 491
Query: 455 HTMP------RACNNSRLLRKQ-----LMEEHEQAIELERRRLSEMQL-------ACKPM 496
H + N LLR++ E +QAIEL+ RRL +QL A P
Sbjct: 492 HPLGSRMLQHSNSANEMLLRRKLEEQQQAAELQQAIELQSRRLMGLQLLDLKSRSAALPT 551
Query: 497 NHHSYF--GYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQV--SHISTHYN 552
+ F ++ E+P + G+ + F + NG+ ++ S S H +
Sbjct: 552 PIGNPFSPSHTTGATPTVESPPDSGEQGNGCGFLFPHKKAVNGADKDESAGDSTTSPHTD 611
Query: 553 DQDSQGLNLPESPFASPIGS 572
S NLP+SPFASP S
Sbjct: 612 SDQSAEHNLPDSPFASPTKS 631
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 50/60 (83%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V+ RIQ L+P++ +KI+GYLL+QDHGE++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGYLLIQDHGEKEMIRLAFGPEALLHSVMAKARTE 60
>gi|357471117|ref|XP_003605843.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355506898|gb|AES88040.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 666
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 13/184 (7%)
Query: 321 SVILAEDVPKYLEYSGEKSD-----PGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSKFG 374
++++ E++ K+ E++D P G++ SRQIYLTFPA+STF E+DVS YFSKFG
Sbjct: 289 ALMMNEELHKFGRSRLERNDFSLYSPTGMINPASRQIYLTFPADSTFREEDVSEYFSKFG 348
Query: 375 PVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYV 434
PVQDVRIP QQKRMFGFVTFVF ETVK IL+KGNPHFVC ARVLVKPY+EK ++ D+K +
Sbjct: 349 PVQDVRIPYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLVKPYKEKGKIPDKKQL 408
Query: 435 EKMQHPMFC----SLHFTDGDTELHTMPRACNNSRLL---RKQLMEEHEQAIELERRRLS 487
++ C L +L R N+ + RK+ E +QA+E++RRRL
Sbjct: 409 QQQGDFSPCRTPTGLVDARDQYDLQLAERMFYNTEDMLWRRKEQAELQQQALEIQRRRLM 468
Query: 488 EMQL 491
+QL
Sbjct: 469 GLQL 472
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 115/240 (47%), Gaps = 29/240 (12%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RI+ ++PEN S I+G LL ++HGE++MIRLA SP+ LI+S+I +A+ +
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL SPP ++ F +ST S + +P A
Sbjct: 61 LGLPCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLPPSLTIPNPSWGATTTTM 120
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
S +F SD +DF LQ+Q+ FL N SY + G+
Sbjct: 121 SMSDQFQNHDDSD-PIDDFQLQDQLSFL------------NDGSDPSYGWG----GNSSL 163
Query: 181 SRRSPSLPE------------FPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPN 228
RRS S+ + K C YF +G+CK+G +CR+ HG + + + SPN
Sbjct: 164 HRRSCSVNDAYLAGSEDPSAGLGWKPCLYFARGYCKNGTSCRFLHGDASAAAAAIVGSPN 223
>gi|326526009|dbj|BAJ93181.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 144/260 (55%), Gaps = 33/260 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 368 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 427
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG-DT----ELHT----M 457
GNPHF+C ARVLVKPY+EK ++ D+ ++ + F S G D +LH M
Sbjct: 428 GNPHFICDARVLVKPYKEKGKVPDKFRKQQGERVDFSSCGSPTGLDARDPFDLHQIGARM 487
Query: 458 PRACN--NSRLLRKQLME-----EHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQ 510
+ N N LLR++L E E +QAIEL+ RRL +Q+ + +
Sbjct: 488 LQHSNSANEMLLRRKLEEQQQAVELQQAIELQSRRLMGLQMLDLKTRSAAAAAAATAPTP 547
Query: 511 VS---------------EAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQD 555
+ E+P + G+ + F + NG+ ++ +T N
Sbjct: 548 IGKPFSPTHTTATTPTFESPPDSGEQGTGCGFLFPHKNAVNGADKDETSGDSTTSPNTDS 607
Query: 556 SQGL--NLPESPFASPIGSG 573
Q NLP+SPFASP SG
Sbjct: 608 DQSAEHNLPDSPFASPTKSG 627
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 67/269 (24%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V+ RIQ L+P++ +KI+G LL+QDHGE++MIRLAF P+ L+ +++ +A+
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGLLLIQDHGEKEMIRLAFGPEALLLAVMAKARKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPV------------------------- 95
LGL P S P +P S A +PF + P
Sbjct: 61 LGL-LPASSGPGTPTSAA--ATGHSPFMLSRQNPGRGGGGTAPSPLSVSSPSSWAPPPVF 117
Query: 96 --SSPASMRAAASPFWDPQMAADQQQQVNSIE-----FVQPGYSDTAAEDFCLQNQMQFL 148
S+ S +AA +MA ++ ++ F G ++ LQ+Q+ FL
Sbjct: 118 SRSNSVSNGSAAE-----EMAGVGEELMSPANGPQSPFFGGGGDSLILDELHLQDQLAFL 172
Query: 149 T------------LEDQFDSVNSVNSD---FSSSYFYPEPALGHVRTSRRSPSLPE---- 189
+ L D + + D F + GH RRS S+ E
Sbjct: 173 SEGGMGGGGRQLPLFDNGECRSPSGGDGGLFPYGAGWANGGPGH----RRSASVSELCFG 228
Query: 190 ----FPVKVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +G+CK+G+ CR+ HG
Sbjct: 229 GGDGLGWKPCLYYARGYCKNGSACRFVHG 257
>gi|224068835|ref|XP_002302837.1| predicted protein [Populus trichocarpa]
gi|224147115|ref|XP_002336411.1| predicted protein [Populus trichocarpa]
gi|222834932|gb|EEE73381.1| predicted protein [Populus trichocarpa]
gi|222844563|gb|EEE82110.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 111/143 (77%), Gaps = 4/143 (2%)
Query: 437 MQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQLACKPM 496
MQHP++ S HF DGD+ELH+ R C+NS+ LRKQ MEEHEQ IELERRRLSE + KP+
Sbjct: 1 MQHPIYHSHHFMDGDSELHSALRVCDNSKSLRKQFMEEHEQEIELERRRLSEFHFSPKPL 60
Query: 497 NHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDS 556
N HS+ G+SMDEL++S EQ +F SAE FNY DVLNNGSTSE++ H T +DQDS
Sbjct: 61 NRHSFLGHSMDELKLS---GEQAEFSSAEHFNYWFDVLNNGSTSEEKHRHTRTSCSDQDS 117
Query: 557 -QGLNLPESPFASPIGSGISTVI 578
QG+NLPESPFAS IGSGISTVI
Sbjct: 118 NQGVNLPESPFASAIGSGISTVI 140
>gi|242041061|ref|XP_002467925.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
gi|241921779|gb|EER94923.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
Length = 680
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 140/259 (54%), Gaps = 40/259 (15%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 363 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 422
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT------ELHTMP-- 458
GNPHF+C ARVLVKPY+EK ++ D+ K Q F G +LH +
Sbjct: 423 GNPHFICDARVLVKPYKEKGKVPDK--YRKQQQGDFSGCTTPPGGLDARDPFDLHQLGAR 480
Query: 459 ----RACNNSRLLRKQLME-----EHEQAIELERRRLSEMQL------------ACKPMN 497
N LLR++L E E +QAIEL+ RRL +QL A P+
Sbjct: 481 MLQHSNSANELLLRRKLEEQQQVAELQQAIELQSRRLMGLQLLDLKARAAATAAAASPLP 540
Query: 498 HHSYFGYSMDELQ---VSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQ 554
++ +L V E+P E G+ L +N G E + D
Sbjct: 541 TPIANAFASSQLVSTIVVESPPESGEQLKLSSGFALEGKVNAGDKEES-----ACDAADS 595
Query: 555 DSQGL-NLPESPFASPIGS 572
D G NLP+SPFASP S
Sbjct: 596 DQSGEHNLPDSPFASPTKS 614
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 87/277 (31%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAP----------------------FSPASTRPVSS- 97
LGL P + P S A+ P P +P +R S+
Sbjct: 61 LGLLLP--ASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPVFSRSNSTS 118
Query: 98 --------------PASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQN 143
P+ + A+PF+ Q A D +D LQ
Sbjct: 119 NGTAEESTGAGEELPSPVNGGAAPFYPHQSA------------------DALLDDLQLQE 160
Query: 144 QMQFLTLEDQ--------FDSV-------NSVNSDFSSSYFYPEPALGHVRTSRRSPSLP 188
Q+ FL FD F+ +P H RRS S+
Sbjct: 161 QLAFLNEGGANPSHQLPGFDGGECRSPGPGDAGGMFAFGLGWPNGGPAH----RRSASVN 216
Query: 189 EFPV-----------KVCHYFNKGFCKHGNNCRYFHG 214
E + K C Y+ +GFCK+G +CR+ HG
Sbjct: 217 ELCLGSGGGGDGFGWKPCLYYARGFCKNGGSCRFVHG 253
>gi|242082672|ref|XP_002441761.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
gi|241942454|gb|EES15599.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
Length = 637
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 111/176 (63%), Gaps = 25/176 (14%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
+RQIYLTFPA+STF+E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFV+AETVK IL+K
Sbjct: 296 AARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSK 355
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTEL------------ 454
GNPHFVC ARVLVKPY+EK ++ DR K+QHP T L
Sbjct: 356 GNPHFVCDARVLVKPYKEKGKVPDR--FRKLQHPHHGDFAGCTSPTGLLDSRDPFDLQQP 413
Query: 455 HTMPRA-----CNNSRLLRKQLMEEH-----EQAIELERRRLSEMQLA-CKPMNHH 499
PR N+ LR++L E+H +QAIELE RR + L K HH
Sbjct: 414 QIGPRMMYGNIANHEAFLRRKLEEQHQAAELQQAIELEGRRFMGLHLLDLKSRGHH 469
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 164 FSSSYFYPEPALGHVRTSRRSPSLPEFPV---------KVCHYFNKGFCKHGNNCRYFHG 214
F Y PA G RRS SL + V + C YF +GFCK+G++CR+ HG
Sbjct: 127 FPDDYDCWSPA-GGATAHRRSFSLSDAEVAGAAGAGAWRPCMYFARGFCKNGSSCRFLHG 185
Query: 215 HP 216
P
Sbjct: 186 LP 187
>gi|413924734|gb|AFW64666.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 633
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 114/189 (60%), Gaps = 29/189 (15%)
Query: 338 KSDPGGIVA--GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
+ D G ++ +RQIYLTFPA+STF+E+DVSNYFS FGPVQDVRIP QQKRMFGFVTFV
Sbjct: 256 RMDRGDLIGSPAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRMFGFVTFV 315
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELH 455
+AETVK IL+KGNPHFVC ARVLVKPY+EK ++ DR K+QH F +
Sbjct: 316 YAETVKAILSKGNPHFVCDARVLVKPYKEKGKVPDR--FRKLQHTHHGGAEFVGCASPTG 373
Query: 456 TMPR--------------------ACNNSRLLRKQLMEEH----EQAIELERRRLSEMQL 491
+ A + LR++L EE +QAIELE RR +QL
Sbjct: 374 LLDSRDPYDLQQPQIGSRMMYGNIANQHEAFLRRKLEEEQAAELQQAIELEGRRFMGLQL 433
Query: 492 A-CKPMNHH 499
K HH
Sbjct: 434 LDLKSRGHH 442
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++R++ L+PEN SK++G LL+QD+ ++++IRLAF P+HL++S + A+ +
Sbjct: 1 MDAWEATKVVFDRVRALDPENASKMMGLLLIQDNSDKELIRLAFGPEHLLHSFVATARAE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + P SP S PLQ +P S A AA Q
Sbjct: 61 L------AAKPASPPSPVLGPLQSG--APWGLPSPGSGAGGGGGGDHHHHSPFAAADQL- 111
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
GY D A+ F D++D + + A H R+
Sbjct: 112 ---------GY-DGGADAF----------YADEYDCWSPAGA-----------AGAHRRS 140
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHP 216
S + + C Y+ +G+CK+G++CR+ HG P
Sbjct: 141 FSLSDAEAAASWRPCMYYARGYCKNGSSCRFLHGVP 176
>gi|222624858|gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japonica Group]
Length = 686
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 142/260 (54%), Gaps = 33/260 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 364 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 423
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSL-HFTDGDT--ELHTMP----- 458
GNPHF+C ARVLVKPY+EK ++ D+K+ C+ DG +LH +
Sbjct: 424 GNPHFICDARVLVKPYKEKGKVPDKKHQGDFSG---CTTPTGLDGRDPFDLHQLGARMLQ 480
Query: 459 -RACNNSRLLRKQ-----LMEEHEQAIELERRRLSEMQL--------------ACKPMNH 498
N +LR++ E +QAIEL RRL ++QL +
Sbjct: 481 HSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPT 540
Query: 499 HSYFGYSMD-ELQVSEAPAEQGD-FPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDS 556
+ FG S + E+P + G+ F ++N G E+ S + + S
Sbjct: 541 ANAFGSSQPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDKEESAGEASLNADSDQS 600
Query: 557 QGLNLPESPFASPIGSGIST 576
NLP+SPFASP S +S
Sbjct: 601 LEHNLPDSPFASPTKSSVSA 620
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 54/263 (20%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF-----------SPASTRPVSSPASMRAAASPFW 109
L L P P S +V P +PF +P+ + +S S A A PF
Sbjct: 61 LALLPPPPPPSSSSPTV---PAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFS 117
Query: 110 DPQMAADQQQQVNSIEFVQPGYSDTAA----------------EDFCLQNQMQFLTLEDQ 153
+ D+ E + P S A +DF LQ Q+ FL E
Sbjct: 118 RSNGSVDEVVGAGE-ELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLN-EGG 175
Query: 154 FDSVNSVNSDFSSSYFYPEP---------ALGHVRTS---RRSPSLPE----------FP 191
+ + + + P P LG RRS S+ E F
Sbjct: 176 VNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFG 235
Query: 192 VKVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G++CR+ HG
Sbjct: 236 WKPCLYYARGFCKNGSSCRFVHG 258
>gi|218192752|gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indica Group]
Length = 686
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 142/260 (54%), Gaps = 33/260 (12%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 364 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 423
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSL-HFTDGDT--ELHTMP----- 458
GNPHF+C ARVLVKPY+EK ++ D+K+ C+ DG +LH +
Sbjct: 424 GNPHFICDARVLVKPYKEKGKVPDKKHQGDFSG---CTTPTGLDGRDPFDLHQLGARMLQ 480
Query: 459 -RACNNSRLLRKQ-----LMEEHEQAIELERRRLSEMQL--------------ACKPMNH 498
N +LR++ E +QAIEL RRL ++QL +
Sbjct: 481 HSNSTNEMILRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPT 540
Query: 499 HSYFGYSMD-ELQVSEAPAEQGD-FPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDS 556
+ FG S + E+P + G+ F ++N G E+ S + + S
Sbjct: 541 ANAFGSSQPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDKEESAGEASLNADSDQS 600
Query: 557 QGLNLPESPFASPIGSGIST 576
NLP+SPFASP S +S
Sbjct: 601 LEHNLPDSPFASPTKSSVSA 620
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 54/263 (20%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF-----------SPASTRPVSSPASMRAAASPFW 109
L L P P S +V P +PF +P+ + +S S A A PF
Sbjct: 61 LALLPPPPPPSSSSPTV---PAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFS 117
Query: 110 DPQMAADQQQQVNSIEFVQPGYSDTAA----------------EDFCLQNQMQFLTLEDQ 153
+ D+ E + P S A +DF LQ Q+ FL E
Sbjct: 118 RSNGSVDEVVGAGE-ELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLN-EGG 175
Query: 154 FDSVNSVNSDFSSSYFYPEP---------ALGHVRTS---RRSPSLPE----------FP 191
+ + + + P P LG RRS S+ E F
Sbjct: 176 VNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFG 235
Query: 192 VKVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G++CR+ HG
Sbjct: 236 WKPCLYYARGFCKNGSSCRFVHG 258
>gi|205688046|sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 22;
Short=OsC3H22
gi|108707943|gb|ABF95738.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 688
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 140/259 (54%), Gaps = 29/259 (11%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 364 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 423
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT--ELHTMP------ 458
GNPHF+C ARVLVKPY+EK ++ D+ + + DG +LH +
Sbjct: 424 GNPHFICDARVLVKPYKEKGKVPDKYRKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQH 483
Query: 459 RACNNSRLLRKQ-----LMEEHEQAIELERRRLSEMQL--------------ACKPMNHH 499
N +LR++ E +QAIEL RRL ++QL +
Sbjct: 484 SNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTA 543
Query: 500 SYFGYSMD-ELQVSEAPAEQGD-FPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQ 557
+ FG S + E+P + G+ F ++N G E+ S + + S
Sbjct: 544 NAFGSSQPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDKEESAGEASLNADSDQSL 603
Query: 558 GLNLPESPFASPIGSGIST 576
NLP+SPFASP S +S
Sbjct: 604 EHNLPDSPFASPTKSSVSA 622
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 54/263 (20%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF-----------SPASTRPVSSPASMRAAASPFW 109
L L P P S +V P +PF +P+ + +S S A A PF
Sbjct: 61 LALLPPPPPPSSSSPTV---PAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFS 117
Query: 110 DPQMAADQQQQVNSIEFVQPGYSDTAA----------------EDFCLQNQMQFLTLEDQ 153
+ D+ E + P S A +DF LQ Q+ FL E
Sbjct: 118 RSNGSVDEVVGAGE-ELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLN-EGG 175
Query: 154 FDSVNSVNSDFSSSYFYPEP---------ALGHVRTS---RRSPSLPE----------FP 191
+ + + + P P LG RRS S+ E F
Sbjct: 176 VNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFG 235
Query: 192 VKVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G++CR+ HG
Sbjct: 236 WKPCLYYARGFCKNGSSCRFVHG 258
>gi|115452803|ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113548473|dbj|BAF11916.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|215734917|dbj|BAG95639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 140/259 (54%), Gaps = 29/259 (11%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 364 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 423
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT--ELHTMP------ 458
GNPHF+C ARVLVKPY+EK ++ D+ + + DG +LH +
Sbjct: 424 GNPHFICDARVLVKPYKEKGKVPDKYRKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQH 483
Query: 459 RACNNSRLLRKQ-----LMEEHEQAIELERRRLSEMQL--------------ACKPMNHH 499
N +LR++ E +QAIEL RRL ++QL +
Sbjct: 484 SNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTA 543
Query: 500 SYFGYSMD-ELQVSEAPAEQGD-FPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQ 557
+ FG S + E+P + G+ F ++N G E+ S + + S
Sbjct: 544 NAFGSSQPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDKEESAGEASLNADSDQSL 603
Query: 558 GLNLPESPFASPIGSGIST 576
NLP+SPFASP S +S
Sbjct: 604 EHNLPDSPFASPTKSSVSA 622
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 54/263 (20%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF-----------SPASTRPVSSPASMRAAASPFW 109
L L P P S +V P +PF +P+ + +S S A A PF
Sbjct: 61 LALLPPPPPPSSSSPTV---PAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFS 117
Query: 110 DPQMAADQQQQVNSIEFVQPGYSDTAA----------------EDFCLQNQMQFLTLEDQ 153
+ D+ E + P S A +DF LQ Q+ FL E
Sbjct: 118 RSNGSVDEVVGAGE-ELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLN-EGG 175
Query: 154 FDSVNSVNSDFSSSYFYPEP---------ALGHVRTS---RRSPSLPE----------FP 191
+ + + + P P LG RRS S+ E F
Sbjct: 176 VNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFG 235
Query: 192 VKVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +GFCK+G++CR+ HG
Sbjct: 236 WKPCLYYARGFCKNGSSCRFVHG 258
>gi|224029225|gb|ACN33688.1| unknown [Zea mays]
Length = 605
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 113/182 (62%), Gaps = 23/182 (12%)
Query: 338 KSDPGGIVA--GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
+ D G +V+ +RQIYLTFPA+STF E DVSNYFS +GPVQDVRIP QQKRMFGFV+FV
Sbjct: 242 RMDRGELVSSPAARQIYLTFPADSTFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFV 301
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTEL- 454
+AETV+ IL KGNPHFVC ARVLVKPY+EK ++ DR K+QHP T L
Sbjct: 302 YAETVRIILCKGNPHFVCDARVLVKPYKEKGKVPDR--FRKLQHPHLGDFAGCTSPTGLL 359
Query: 455 -----------HTMPRA-----CNNSRLLRKQLMEEHEQAIELERRRLSEMQLA-CKPMN 497
PR N+ LR++L EE +QAIELE RR + L K
Sbjct: 360 DSRDPFDLQQPQIGPRMMYGNIANHEAFLRRKL-EEQQQAIELEGRRFMGLHLLDLKIRG 418
Query: 498 HH 499
HH
Sbjct: 419 HH 420
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 67/205 (32%)
Query: 26 IGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLGLGKPTVSPPISPASVADLPLQFA 85
+G LL+QD+ +++++RLAF PDH++++ A+ + P SP S
Sbjct: 1 MGLLLIQDNSDKELVRLAFGPDHILHAFAAAARAD------LAAKPASPPS--------- 45
Query: 86 PFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQM 145
PV P + ASP W P +D QQ P +D A
Sbjct: 46 --------PV--PGPLHQPASP-WAP--PSDHQQA--------PFAADHA---------- 74
Query: 146 QFLTLEDQFDSVNSVNSDFSSSY--FYPEPALGHVRTSRRSPSLPEFPV----------K 193
L +D ++ ++ FS Y + P A H RRS SL + + +
Sbjct: 75 ----LGYDYDGADA-DTFFSDDYDCWSPAGATAH----RRSFSLSDAELAAAAAGPGAWR 125
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPMP 218
C YF +GFCK+G+ CR+ HG P P
Sbjct: 126 PCMYFARGFCKNGSACRFLHGLPEP 150
>gi|293333413|ref|NP_001169691.1| uncharacterized protein LOC100383572 [Zea mays]
gi|224030935|gb|ACN34543.1| unknown [Zea mays]
Length = 630
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 113/182 (62%), Gaps = 23/182 (12%)
Query: 338 KSDPGGIVA--GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
+ D G +V+ +RQIYLTFPA+STF E DVSNYFS +GPVQDVRIP QQKRMFGFV+FV
Sbjct: 267 RMDRGELVSSPAARQIYLTFPADSTFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFV 326
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTEL- 454
+AETV+ IL KGNPHFVC ARVLVKPY+EK ++ DR K+QHP T L
Sbjct: 327 YAETVRIILCKGNPHFVCDARVLVKPYKEKGKVPDR--FRKLQHPHLGDFAGCTSPTGLL 384
Query: 455 -----------HTMPRA-----CNNSRLLRKQLMEEHEQAIELERRRLSEMQLA-CKPMN 497
PR N+ LR++L EE +QAIELE RR + L K
Sbjct: 385 DSRDPFDLQQPQIGPRMMYGNIANHEAFLRRKL-EEQQQAIELEGRRFMGLHLLDLKIRG 443
Query: 498 HH 499
HH
Sbjct: 444 HH 445
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 67/230 (29%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TKAV++R++ L+P+N SKI+G LL+QD+ ++++IRLAF PDH++++ A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHILHAFAAAARAD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
+ P SP S PV P + ASP+ P +D QQ
Sbjct: 61 ------LAAKPASPPS-----------------PV--PGPLHQPASPWAPP---SDHQQA 92
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSY--FYPEPALGHV 178
P +D A L +D ++ ++ FS Y + P A H
Sbjct: 93 --------PFAADHA--------------LGYDYDGADA-DTFFSDDYDCWSPAGATAH- 128
Query: 179 RTSRRSPSLPEFPV----------KVCHYFNKGFCKHGNNCRYFHGHPMP 218
RRS SL + + + C YF +GFCK+G+ CR+ HG P P
Sbjct: 129 ---RRSFSLSDAELAAAAAGPGAWRPCMYFARGFCKNGSACRFLHGLPEP 175
>gi|414876221|tpg|DAA53352.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 587
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 160/320 (50%), Gaps = 52/320 (16%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
K C Y+ GFCK+G +CR+ HG S +A + + ++ + +
Sbjct: 227 KPCLYYASGFCKNGGSCRFVHGG---------LSDDAVALAGTKMEAAADQQQQCQDFLI 277
Query: 253 ELLKQRRG---FPIS-IASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
QR G FP S SLP K L L + Q+H +A + + +L
Sbjct: 278 RSKGQRLGPAVFPYSPTGSLPG-SPSAASKCLSF--LLQQRQQHDRAAAAASLMLGGGDE 334
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSN 368
+ + + RP + D + S SRQIYLTFPA+STF E+DVSN
Sbjct: 335 AHKFMARPR-----LDRADFASLMNPS------------SRQIYLTFPADSTFREEDVSN 377
Query: 369 YFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRL 428
YFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C RVLVKPY+EK ++
Sbjct: 378 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDTRVLVKPYKEKGKV 437
Query: 429 VDRKYVEKMQHPMFCSLHFTDGDT------ELHTMP------RACNNSRLLRKQLME--- 473
D KY K Q F G +LH + N LLR++L E
Sbjct: 438 PD-KY-RKQQQGDFSGYTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQ 495
Query: 474 --EHEQAIELERRRLSEMQL 491
E + AIEL+ RRL +QL
Sbjct: 496 AAELQHAIELQSRRLMGLQL 515
>gi|449525104|ref|XP_004169559.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 349
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 151/263 (57%), Gaps = 33/263 (12%)
Query: 337 EKSDPGGIVAG---SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVT 393
E+SD G G +RQIYLTFPAES F E+DVS YFS +GPVQDVRIP QQKRMFGFVT
Sbjct: 23 ERSDFSGGGMGNPAARQIYLTFPAESCFKEEDVSKYFSIYGPVQDVRIPYQQKRMFGFVT 82
Query: 394 FVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR-KYVEKMQH----PMFCSLHFT 448
FV+AETVK ILAKGNPHFVC +RVLVKPY+EK ++ D+ + ++M+ P
Sbjct: 83 FVYAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKFRKQQQMERGDLSPCGTPTGLD 142
Query: 449 DGDT-ELHTMPRACNNSR--LLRKQLMEEHE--QAIELERRRLSEMQLAC--KPMNHHSY 501
D +LH R NS+ L R++L E+ + QA+EL+ R+ +QLA KP++HH+
Sbjct: 143 SRDLHDLHHGARMYYNSQDMLWRRKLEEQADLQQALELQALRVMSLQLADVRKPLHHHTP 202
Query: 502 FGYSMDELQVSEAPAEQGDFPSAERFNYLL---------------DVLNNGSTSEDQVSH 546
S S P Q F S + LL V+NN + D S
Sbjct: 203 L--STCSPIPSPNPFNQTLFHSIPTNSQLLQENGSNHLPEIRVEPQVMNNFDLTADSDSS 260
Query: 547 ISTHYNDQD-SQGLNLPESPFAS 568
+ Q+ S NLP+SPFAS
Sbjct: 261 NGKETDLQETSLEHNLPDSPFAS 283
>gi|14586374|emb|CAC42905.1| putative protein [Arabidopsis thaliana]
Length = 574
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 170/332 (51%), Gaps = 57/332 (17%)
Query: 192 VKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEI 251
K C YF++G CK+G +C++ HG P++ + N I + SP +E +
Sbjct: 154 CKPCVYFSRGLCKNGESCKFIHGG-YPDNM------DGNGIVAD----SPRKMENFVRQH 202
Query: 252 TELLK------QRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLAR 305
E+++ Q+R + P + YEK L + +QR G + + +
Sbjct: 203 EEMMRLKLAYQQQRLASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSS 258
Query: 306 LKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
+ ++ + G++S+ + SRQIYLTFPA+STF ++D
Sbjct: 259 SPGRLERME----------------LAMHLGDQSN-----SASRQIYLTFPADSTFKDED 297
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
V+ YFS FG VQDVRIP QQKRMFGFV+F ETVK +LA+GNPHF+C +RVLVKPY+EK
Sbjct: 298 VATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEK 357
Query: 426 SRLVDRK-------YVEKMQHPMFCSLHFTD--GDTELHTMPRACNNSRLLRKQLMEEHE 476
+++D+K +E+ + S D ++ H + R + ++ +E+ +
Sbjct: 358 GKVLDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKIEQAD 417
Query: 477 --QAIELERRRLSEMQL----ACKPMNHHSYF 502
+AIELERRR +QL +NHH F
Sbjct: 418 LLRAIELERRRFINLQLPEFKNSVTLNHHRSF 449
>gi|240256278|ref|NP_568277.5| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187639|ref|NP_001190296.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187641|ref|NP_001190297.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334302925|sp|Q94CJ8.3|C3H55_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 55;
Short=AtC3H55
gi|26453236|dbj|BAC43691.1| unknown protein [Arabidopsis thaliana]
gi|27311807|gb|AAO00869.1| putative protein [Arabidopsis thaliana]
gi|332004426|gb|AED91809.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004427|gb|AED91810.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004428|gb|AED91811.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
Length = 650
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 170/332 (51%), Gaps = 57/332 (17%)
Query: 192 VKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEI 251
K C YF++G CK+G +C++ HG P++ + N I + SP +E +
Sbjct: 230 CKPCVYFSRGLCKNGESCKFIHGG-YPDNM------DGNGIVAD----SPRKMENFVRQH 278
Query: 252 TELLK------QRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLAR 305
E+++ Q+R + P + YEK L + +QR G + + +
Sbjct: 279 EEMMRLKLAYQQQRLASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSS 334
Query: 306 LKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
+ ++ + G++S+ + SRQIYLTFPA+STF ++D
Sbjct: 335 SPGRLERME----------------LAMHLGDQSN-----SASRQIYLTFPADSTFKDED 373
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
V+ YFS FG VQDVRIP QQKRMFGFV+F ETVK +LA+GNPHF+C +RVLVKPY+EK
Sbjct: 374 VATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEK 433
Query: 426 SRLVDRK-------YVEKMQHPMFCSLHFTD--GDTELHTMPRACNNSRLLRKQLMEEHE 476
+++D+K +E+ + S D ++ H + R + ++ +E+ +
Sbjct: 434 GKVLDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKIEQAD 493
Query: 477 --QAIELERRRLSEMQL----ACKPMNHHSYF 502
+AIELERRR +QL +NHH F
Sbjct: 494 LLRAIELERRRFINLQLPEFKNSVTLNHHRSF 525
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD ++T + +I+ LEP+ KIIGYLLL D G+RD++ LA P+ ++ S I++ K
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>gi|414888142|tpg|DAA64156.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 661
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 135/245 (55%), Gaps = 36/245 (14%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 362 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 421
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG------DTELHTMPRA 460
GNPHF+C ARVLVKPY+EK ++ D+ +++Q F++G +LH +
Sbjct: 422 GNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDF-FSNGLDGRENHLDLHQLGAR 480
Query: 461 ------CNNSRLLRKQ-------LMEEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMD 507
N LLR++ E +QA+EL+ RRL +QL
Sbjct: 481 MLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMRLQLL--------------- 525
Query: 508 ELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGLNLPESPFA 567
+L+ +P+ G P +D + E S + + S NLP+SPFA
Sbjct: 526 DLKPRASPSPIGSMPLGPT-QRAVDSPPDSGREESSAGDASPNADSDQSAEHNLPDSPFA 584
Query: 568 SPIGS 572
SP S
Sbjct: 585 SPTRS 589
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 58/264 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGL------GKPTVSPPISPASVADLPLQFAPFSPASTRP-------------------- 94
LGL G PT + S L Q + A T P
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 ---VSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLT-- 149
VS+ A A A+ P A + F G + ++ LQ Q+ FL+
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPS----PFFAAG--EPLLDELQLQEQLAFLSDA 174
Query: 150 --------LEDQFDSVNSVNSDFSSSYFYPEPALGHVRTS---RRSPSLPEFPV------ 192
L D + + + D ++ F+P ALG RRS S+ E +
Sbjct: 175 AAGGHQLPLFDASECRSPGSGD--AAGFFPYGALGWANGGPGHRRSSSVSELCLGGADGL 232
Query: 193 --KVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +G+CK+G+ CR+ HG
Sbjct: 233 GWKPCLYYARGYCKNGSACRFVHG 256
>gi|297811379|ref|XP_002873573.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
gi|297319410|gb|EFH49832.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
Length = 651
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 189/374 (50%), Gaps = 68/374 (18%)
Query: 192 VKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEI 251
K C YF++G CK+G +C++ HG PE+ + N I + SP +E +
Sbjct: 229 CKPCVYFSRGLCKNGESCKFIHGG-YPENM------DCNGIVAD----SPRKMENFVRQH 277
Query: 252 TELLK------QRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLAR 305
E+++ Q+R + P++ YEK L + +QR G + + +
Sbjct: 278 EEMMRLKLAYQQQRLASQILGRAPLLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSS 333
Query: 306 LKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQD 365
+ ++ ++A + G++S+ + SRQIYLTFPA+STF ++D
Sbjct: 334 SPGRLERME--------LMAMQL-------GDQSN-----SVSRQIYLTFPADSTFKDED 373
Query: 366 VSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
V+ YFS FG VQDVRIP QQKRMFGFV+F ETVK +LA+GNPHF+C +RVLVKPY+EK
Sbjct: 374 VATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEK 433
Query: 426 SRLVDRK-------YVEKMQHPMFCSLHFTD--GDTELHTM-PRACNNSRLLRKQLMEEH 475
+++D+K +E+ + S D ++ H + + R + ++ ME+
Sbjct: 434 GKVLDKKQQQLLQQQIERGNYSPCSSPSGVDPREQSDFHLVGSKMLYERREMMRRKMEQA 493
Query: 476 E--QAIELERRRLSEMQL----ACKPMNHHSYF-----GYSMDELQVSEAPAEQGDFPSA 524
+ +AIELERRR +QL NHH F GY S A + DF S
Sbjct: 494 DLLRAIELERRRFINLQLPEFKNSVMQNHHRSFSVGSPGY------FSSASNQSPDFQSE 547
Query: 525 ERFNYLLDVLNNGS 538
L+V+++ S
Sbjct: 548 LTVADALEVVDDTS 561
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD ++T + +I+ LEP+ KIIGYLLLQD G+RD++ LA P+ ++ S+I++ K
Sbjct: 1 MDSGDATALLLTKIRSLEPDYAPKIIGYLLLQDFGDRDLMHLARGPESILQSIISKVKSH 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>gi|110738379|dbj|BAF01116.1| hypothetical protein [Arabidopsis thaliana]
Length = 297
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 114/168 (67%), Gaps = 17/168 (10%)
Query: 336 GEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
G+KS+ + S+QIYLTFPA+S+FT++DVSNYF FGPVQDVRIP QQKRMFGFVTF+
Sbjct: 4 GDKSN-----SASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFL 58
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT--- 452
+ETV+ ILA+GNPHF+C +RVLVKPY+EK R+++ + ++ +F+ G +
Sbjct: 59 HSETVRIILARGNPHFICDSRVLVKPYKEKGRILENRRQQQQLLQQMERGNFSPGSSPSG 118
Query: 453 -------ELHTMPRACNNSR--LLRKQLMEEHEQAIELERRRLSEMQL 491
+ H PR +N++ + RK + +QAIE +RRR +QL
Sbjct: 119 MGSRDLFDSHLAPRMFSNTQEMMRRKAEQADLQQAIEFQRRRFLSLQL 166
>gi|240255377|ref|NP_188747.5| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642939|gb|AEE76460.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 117/168 (69%), Gaps = 18/168 (10%)
Query: 336 GEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
G+KS+ + S+QIYLTFPA+S+FT++DVSNYF FGPVQDVRIP QQKRMFGFVTF+
Sbjct: 4 GDKSN-----SASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFL 58
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT--- 452
+ETV+ ILA+GNPHF+C +RVLVKPY+EK R+++++ +++ M +F+ G +
Sbjct: 59 HSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERG-NFSPGSSPSG 117
Query: 453 -------ELHTMPRACNNSR--LLRKQLMEEHEQAIELERRRLSEMQL 491
+ H PR +N++ + RK + +QAIE +RRR +QL
Sbjct: 118 MDSRDLFDSHLAPRMFSNTQEMMRRKAEQADLQQAIEFQRRRFLSLQL 165
>gi|21594547|gb|AAM66020.1| unknown [Arabidopsis thaliana]
Length = 540
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 147/274 (53%), Gaps = 53/274 (19%)
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDV 379
++++ +++ K + E+ D + SRQIYLTFPA+S F E+DVSNYFS FGPVQDV
Sbjct: 229 ALMIGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDV 288
Query: 380 RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR----KYVE 435
RIP QQKRMFGFVTFV+ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ D+ + E
Sbjct: 289 RIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTE 348
Query: 436 KMQHPMFCSLHFTDGDTELHTMPRAC-------NNSR--LLRKQLMEEHEQAIELERRRL 486
+ P T L + PR NN++ L R + EE +EL+ RRL
Sbjct: 349 RELSP-----------TGLDSSPRDVLGGRGFYNNTQDVLWRSKFEEE---ILELQSRRL 394
Query: 487 SEMQL--------ACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGS 538
+QL P N HS +S + + ++ E+ GS
Sbjct: 395 MNLQLLDVKKHFQLNSPTNIHSPNPFSQSLISPRPLSVIKREYDGGEK--------GKGS 446
Query: 539 T---SEDQVSHISTHYNDQDSQGLNLPESPFASP 569
+ S+D ++ D +LP+SPFASP
Sbjct: 447 SKEGSDDDTMNLPERLED------SLPDSPFASP 474
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 41/213 (19%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+PEN SKI+G LLLQDHGE++MIRLAF P+ L++S+I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
LGL + SP Q SP + R +S+ A+ PF
Sbjct: 61 LGLMNCSRSP---------WSHQDELISPKNNR----GSSLNPASLPF------------ 95
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
Y++ L N + + D +NS ++DF S +
Sbjct: 96 ----------YANGGRSSRDLTNDFELM------DDMNSRSTDFLGSVHARSGSCVLDGL 139
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFH 213
S F C YF +GFCK+G +CR+ H
Sbjct: 140 GYGGDSDLGFGGVPCSYFARGFCKNGASCRFVH 172
>gi|224054502|ref|XP_002298292.1| predicted protein [Populus trichocarpa]
gi|222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 10/148 (6%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
SRQIYLTFPA+STF E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFVFAETV+ ILAKG
Sbjct: 281 SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVFAETVRLILAKG 340
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKY-----VEKMQHPMFCSLHFTDGDT--ELHTMPRA 460
NPHFVC +RVLVKPY+EK ++ D+K+ +E+ ++ S + +LH R
Sbjct: 341 NPHFVCDSRVLVKPYKEKGKVPDKKHHQQQQIEREEYSACPSPSRINSREAFDLHIGARM 400
Query: 461 CNNSR-LLRKQLMEE--HEQAIELERRR 485
N++ +L ++L EE +QAIE + RR
Sbjct: 401 LYNTQEMLSRKLKEEADFQQAIESQGRR 428
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 114/243 (46%), Gaps = 61/243 (25%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+ V++RIQ LEPEN SKI+GYLLLQD+GE++MIR AF P+ L+++LI AK +
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 61 LG-LGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQ 119
LG L T S P P+S +P S S+R ++
Sbjct: 61 LGFLSNKTSSSPFIPSSRP------SPLSIPSSRITNN---------------------- 92
Query: 120 QVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL---- 175
N + P T + F N L+ + +S+N+ SS+ F P +L
Sbjct: 93 --NGFDITNPSSPSTNSWHFSTPNSTSPLSYASVVNGASSINA--SSTPFQPTVSLSNAF 148
Query: 176 -------------GHVRTSRRSPSLPE-----------FPVKVCHYFNKGFCKHGNNCRY 211
G + +RS S+P+ F K C YF++GFCK+G+ CR+
Sbjct: 149 PYSNNNTTSPTKYGDNGSHKRSFSVPDTCVGSEDSNSGFGWKPCLYFSRGFCKNGSGCRF 208
Query: 212 FHG 214
HG
Sbjct: 209 VHG 211
>gi|115452805|ref|NP_001050003.1| Os03g0329200 [Oryza sativa Japonica Group]
gi|122247068|sp|Q10LZ9.1|C3H23_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 23;
Short=OsC3H23
gi|108707944|gb|ABF95739.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108707945|gb|ABF95740.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548474|dbj|BAF11917.1| Os03g0329200 [Oryza sativa Japonica Group]
Length = 677
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 137/255 (53%), Gaps = 36/255 (14%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 357 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 416
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----ELHTM----- 457
GNPHF+C ARVLVKPY+EK ++ D KY K Q FC + T D + H +
Sbjct: 417 GNPHFICDARVLVKPYKEKGKVPD-KY-RKQQQGDFCCMSPTGLDARDPFDFHQLGARML 474
Query: 458 --PRACNNSRLLRK----QLMEEHEQAIELERRRLSEMQL------------------AC 493
+ N L RK Q E +QAI+L RRL +QL
Sbjct: 475 QHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLP 534
Query: 494 KPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYND 553
P+ + G V P+ G ++ V+N G+ + D ++ + +
Sbjct: 535 TPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKA-DSAGEVTRNADS 593
Query: 554 QDSQGLNLPESPFAS 568
S NLP+SPFAS
Sbjct: 594 DQSGEHNLPDSPFAS 608
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 124/269 (46%), Gaps = 71/269 (26%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF----SPASTRPVSSPASMRAAASPF-----WDP 111
L L + PP + +S +P +PF + P SP+S A A PF
Sbjct: 61 LAL----LPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSW-AQAQPFSRSNSMGN 115
Query: 112 QMAADQQQQVNSIEFVQ-----------------PGYSDTAAEDFCLQNQMQFLTLEDQF 154
AAD + V + E + P D +DF LQ Q+ FL
Sbjct: 116 GGAAD--EMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFL-----H 168
Query: 155 DSVNSVNSDFSSSYF----------------------YPEPALGHVRTSRRSPSLPE--- 189
D VN + F + GH RRS S+ E
Sbjct: 169 DGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGH----RRSASVNELCL 224
Query: 190 ----FPVKVCHYFNKGFCKHGNNCRYFHG 214
F K C Y+ +GFCK+G+ CR+ HG
Sbjct: 225 GGDGFGWKPCLYYARGFCKNGSTCRFVHG 253
>gi|222624859|gb|EEE58991.1| hypothetical protein OsJ_10701 [Oryza sativa Japonica Group]
Length = 677
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 137/255 (53%), Gaps = 36/255 (14%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 357 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 416
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----ELHTM----- 457
GNPHF+C ARVLVKPY+EK ++ D KY K Q FC + T D + H +
Sbjct: 417 GNPHFICDARVLVKPYKEKGKVPD-KY-RKQQQGDFCCMSPTGLDARDPFDFHQLGARML 474
Query: 458 --PRACNNSRLLRK----QLMEEHEQAIELERRRLSEMQL------------------AC 493
+ N L RK Q E +QAI+L RRL +QL
Sbjct: 475 QHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLP 534
Query: 494 KPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYND 553
P+ + G V P+ G ++ V+N G+ + D ++ + +
Sbjct: 535 TPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKA-DSAGEVTRNADS 593
Query: 554 QDSQGLNLPESPFAS 568
S NLP+SPFAS
Sbjct: 594 DQSGEHNLPDSPFAS 608
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 9/112 (8%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF----SPASTRPVSSPASMRAAASPF 108
L L + PP + +S +P +PF + P SP+S A A PF
Sbjct: 61 LAL----LPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSW-AQAQPF 107
>gi|414876222|tpg|DAA53353.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 625
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 149/308 (48%), Gaps = 68/308 (22%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
K C Y+ GFCK+G +CR+ HG S +A + + ++ + +
Sbjct: 227 KPCLYYASGFCKNGGSCRFVHGG---------LSDDAVALAGTKMEAAADQQQQCQDFLI 277
Query: 253 ELLKQRRG---FPIS-IASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
QR G FP S SLP K L L + Q+H +A + + +L
Sbjct: 278 RSKGQRLGPAVFPYSPTGSLPG-SPSAASKCLSF--LLQQRQQHDRAAAAASLMLGGGDE 334
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSN 368
+ + + RP + D + S SRQIYLTFPA+STF E+DVSN
Sbjct: 335 AHKFMARPR-----LDRADFASLMNPS------------SRQIYLTFPADSTFREEDVSN 377
Query: 369 YFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRL 428
YFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C RVLVKPY+EK +
Sbjct: 378 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDTRVLVKPYKEKGKH 437
Query: 429 VDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLME-----EHEQAIELER 483
+ N LLR++L E E + AIEL+
Sbjct: 438 SNSA------------------------------NELLLRRKLEEQQQAAELQHAIELQS 467
Query: 484 RRLSEMQL 491
RRL +QL
Sbjct: 468 RRLMGLQL 475
>gi|218192753|gb|EEC75180.1| hypothetical protein OsI_11407 [Oryza sativa Indica Group]
Length = 677
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 136/255 (53%), Gaps = 36/255 (14%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 357 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 416
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----ELHTM----- 457
GNPHF+C ARVLVKPY+EK ++ D+ K Q FC + T D + H +
Sbjct: 417 GNPHFICDARVLVKPYKEKGKVPDK--YRKQQQGDFCCMSPTGLDARDPFDFHQLGARML 474
Query: 458 --PRACNNSRLLRK----QLMEEHEQAIELERRRLSEMQL------------------AC 493
+ N L RK Q E +QAI+L RRL +QL
Sbjct: 475 QHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLP 534
Query: 494 KPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYND 553
P+ + G V P+ G ++ V+N G+ + D ++ + +
Sbjct: 535 TPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKA-DSAGEVTRNADS 593
Query: 554 QDSQGLNLPESPFAS 568
S NLP+SPFAS
Sbjct: 594 DQSGEHNLPDSPFAS 608
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 67/267 (25%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G LL+QDHG+++MIRLAF P+ L++S++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPF----SPASTRPVSSPASMRAAASPFWDPQMAAD 116
L L + PP + +S +P +PF + P SP+S A A PF +
Sbjct: 61 LAL----LPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSW-AQAQPFSRSNSMGN 115
Query: 117 ---QQQQVNSIEFVQ-----------------PGYSDTAAEDFCLQNQMQFLTLEDQFDS 156
+ V + E + P D +DF LQ Q+ FL D
Sbjct: 116 GGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFL-----HDG 170
Query: 157 VNSVNSDFSSSYF----------------------YPEPALGHVRTSRRSPSLPE----- 189
VN + F + GH RRS S+ E
Sbjct: 171 AGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGH----RRSASVNELCLGG 226
Query: 190 --FPVKVCHYFNKGFCKHGNNCRYFHG 214
F K C Y+ +GFCK+G+ CR+ HG
Sbjct: 227 DGFGWKPCLYYARGFCKNGSTCRFVHG 253
>gi|449533070|ref|XP_004173500.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 450
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 142/260 (54%), Gaps = 30/260 (11%)
Query: 342 GGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVK 401
G I SRQIYLTFPA+STF E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFV+ ETVK
Sbjct: 89 GIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVK 148
Query: 402 QILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDG-DTE-----LH 455
ILAKGNPHFVC ARVLVKPY+EK ++ D+ ++ F G D+ L
Sbjct: 149 LILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQ 208
Query: 456 TMPRACNNSR--LLRKQLMEEHE---QAIELERRRLSEMQLACK-----PMNHHSYFGYS 505
R NS LL ++ +EE + Q ++L+ RRL +QL P +HH
Sbjct: 209 LGSRMFYNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLPHHHHRALSTG 268
Query: 506 MDELQVSEAP----AEQGDFPS--AERFNYLLDVLN-NGSTSEDQVSHISTHYNDQDSQG 558
+ +P A+ FPS + N D+L NG+T +S + D
Sbjct: 269 SPIPSPTHSPNPLFAQNLIFPSIRSSGSNSTSDILRENGATPVRTPPPVSVMASSSD--- 325
Query: 559 LNLPESPFASPIGSGISTVI 578
+P P SP+ +G S I
Sbjct: 326 --MPRQP--SPVDNGASATI 341
>gi|414882093|tpg|DAA59224.1| TPA: putative RNA-binding zinc finger family protein isoform 1 [Zea
mays]
gi|414882094|tpg|DAA59225.1| TPA: putative RNA-binding zinc finger family protein isoform 2 [Zea
mays]
Length = 629
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 2/93 (2%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFPA+STF+E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFV+AETVK IL+KG
Sbjct: 281 ARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKG 340
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHP 440
NPHFVC ARVLVKPY+EK ++ DR K+QHP
Sbjct: 341 NPHFVCDARVLVKPYKEKGKVPDR--FRKLQHP 371
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TKAV++R++ L+P+N SKI+G LL+QD+ ++++IRLAF PDHL+++ ++ A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + P SP S PV P A P P +D Q Q
Sbjct: 61 L------AAKPASPPS-----------------PVLGPLHQTWGAPPHPSPTAGSDHQHQ 97
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
+ GY DF D +D + + S+ +
Sbjct: 98 APFAADLALGY------DFDGAGAGADAFFPDDYDCWSPAGAAHRRSFSLSDAEATAAAA 151
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHP 216
+ + C YF +GFCK+G++CR+ HG P
Sbjct: 152 GGAA-------WRPCMYFARGFCKNGSSCRFLHGFP 180
>gi|414882092|tpg|DAA59223.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 630
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 2/93 (2%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFPA+STF+E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFV+AETVK IL+KG
Sbjct: 281 ARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKG 340
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHP 440
NPHFVC ARVLVKPY+EK ++ DR K+QHP
Sbjct: 341 NPHFVCDARVLVKPYKEKGKVPDR--FRKLQHP 371
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TKAV++R++ L+P+N SKI+G LL+QD+ ++++IRLAF PDHL+++ ++ A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + P SP S PV P A P P +D Q Q
Sbjct: 61 L------AAKPASPPS-----------------PVLGPLHQTWGAPPHPSPTAGSDHQHQ 97
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
+ GY DF D +D + + S+ +
Sbjct: 98 APFAADLALGY------DFDGAGAGADAFFPDDYDCWSPAGAAHRRSFSLSDAEATAAAA 151
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHP 216
+ + C YF +GFCK+G++CR+ HG P
Sbjct: 152 GGAA-------WRPCMYFARGFCKNGSSCRFLHGFP 180
>gi|414882095|tpg|DAA59226.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 379
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 2/93 (2%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFPA+STF+E+DVSNYFS +GPVQDVRIP QQKRMFGFVTFV+AETVK IL+KG
Sbjct: 31 ARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKG 90
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHP 440
NPHFVC ARVLVKPY+EK ++ DR K+QHP
Sbjct: 91 NPHFVCDARVLVKPYKEKGKVPDR--FRKLQHP 121
>gi|242069801|ref|XP_002450177.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
gi|241936020|gb|EES09165.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
Length = 612
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 124/210 (59%), Gaps = 40/210 (19%)
Query: 322 VILAEDVPKYLEYSGEKSDPGGIVA--GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDV 379
V+ ED+ ++ S + D G ++ +RQIYLTFPA+STF+E+DVSNYFS FGPVQDV
Sbjct: 221 VLGGEDMHRFPVRS-PRMDRGDLIGSPAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDV 279
Query: 380 RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQH 439
RIP QQKRMFGFVTFV+AETVK +L+KGNPHFVC ARVLVKPY+EK ++ DR K+QH
Sbjct: 280 RIPYQQKRMFGFVTFVYAETVKVLLSKGNPHFVCDARVLVKPYKEKGKVPDR--FRKLQH 337
Query: 440 PMFCSLHFTDGDTELHTMPRACNNSR----LLRKQL--------MEEHE----------- 476
H G+ T P +SR L + Q+ M HE
Sbjct: 338 -----AHHGVGEFAGCTSPTGLLDSRDPYDLQQPQIGPRMMYGNMANHEAFLRRKLEEQQ 392
Query: 477 ------QAIELERRRLSEMQLA-CKPMNHH 499
QAIELE RR +QL K HH
Sbjct: 393 QAAELQQAIELEGRRFMGLQLLDLKSRGHH 422
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 6/87 (6%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++R+++L+PEN S+++G LL+QD+ ++++IRLAF PDHL+++ + A+ +
Sbjct: 1 MDAWEATKVVFDRVRELDPENASRMMGLLLIQDNSDKELIRLAFGPDHLLHAFVATARAE 60
Query: 61 LGL-GKPTVSPPISPASVADLPLQFAP 86
L GKP SP S PLQ P
Sbjct: 61 LAANGKPA-----SPPSPVLGPLQTGP 82
>gi|413924733|gb|AFW64665.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 697
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 83/96 (86%), Gaps = 2/96 (2%)
Query: 338 KSDPGGIVA--GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFV 395
+ D G ++ +RQIYLTFPA+STF+E+DVSNYFS FGPVQDVRIP QQKRMFGFVTFV
Sbjct: 256 RMDRGDLIGSPAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRMFGFVTFV 315
Query: 396 FAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR 431
+AETVK IL+KGNPHFVC ARVLVKPY+EK ++ DR
Sbjct: 316 YAETVKAILSKGNPHFVCDARVLVKPYKEKGKVPDR 351
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++R++ L+PEN SK++G LL+QD+ ++++IRLAF P+HL++S + A+ +
Sbjct: 1 MDAWEATKVVFDRVRALDPENASKMMGLLLIQDNSDKELIRLAFGPEHLLHSFVATARAE 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + P SP S PLQ +P S A AA Q
Sbjct: 61 L------AAKPASPPSPVLGPLQSG--APWGLPSPGSGAGGGGGGDHHHHSPFAAADQL- 111
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
GY D A+ F D++D + + A H R+
Sbjct: 112 ---------GY-DGGADAF----------YADEYDCWSPAGA-----------AGAHRRS 140
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHP 216
S + + C Y+ +G+CK+G++CR+ HG P
Sbjct: 141 FSLSDAEAAASWRPCMYYARGYCKNGSSCRFLHGVP 176
>gi|334186234|ref|NP_001190170.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646964|gb|AEE80485.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 406
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 111/172 (64%), Gaps = 15/172 (8%)
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDV 379
++++ +D+ K + E+ D SRQIYLTFPA+S F E+DVS+YFS FGPVQDV
Sbjct: 126 ALMMGDDLHKLGIWRPERIDLSATACPASRQIYLTFPADSIFREEDVSDYFSTFGPVQDV 185
Query: 380 RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQH 439
RIP QQKRMFGFVTF++ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ D KY K
Sbjct: 186 RIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPD-KYRTK--- 241
Query: 440 PMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQL 491
P + F G H LL K+ E E+A+EL+ RL +QL
Sbjct: 242 PSRDIMDFQLGGRAFH--------EDLLWKRRFE--ERALELQSTRLMNLQL 283
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+P N SKIIG LLLQDHGE++MIRLAF P +L++S+I +AK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|224104195|ref|XP_002313354.1| predicted protein [Populus trichocarpa]
gi|222849762|gb|EEE87309.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 11/157 (7%)
Query: 346 AGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILA 405
+ SRQIYLTFPA+S+F ++DVSNYF FGPVQDVRIP QQKRMFGFVTFV ETVK+ILA
Sbjct: 141 SASRQIYLTFPADSSFKDEDVSNYFCSFGPVQDVRIPYQQKRMFGFVTFVHPETVKEILA 200
Query: 406 KGNPHFVCGARVLVKPYREKSRLVDR----KYVEKMQHPMFCSLHFTDGDT-ELHTMPRA 460
KGNPH++C +RVLVKPY+EK ++ ++ Y+ + +L ++ + T+ RA
Sbjct: 201 KGNPHYICESRVLVKPYKEKGKVANKYGCNSYLRGGIFHLLQALQVLILESYVIFTLVRA 260
Query: 461 --CNNS--RLLRKQLMEEHE--QAIELERRRLSEMQL 491
N+ +LR++L E+ E QAIEL+ RRL +QL
Sbjct: 261 RMLYNTPEIMLRRKLEEQAELQQAIELQGRRLINLQL 297
>gi|212722294|ref|NP_001131248.1| uncharacterized protein LOC100192560 [Zea mays]
gi|195656461|gb|ACG47698.1| nucleic acid binding protein [Zea mays]
Length = 629
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/93 (76%), Positives = 82/93 (88%), Gaps = 2/93 (2%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFPA+STF+E+DVS YFS +GPVQDVRIP QQKRMFGFVTFV+AETVK IL+KG
Sbjct: 281 ARQIYLTFPADSTFSEEDVSIYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKG 340
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHP 440
NPHFVC ARVLVKPY+EK ++ DR K+QHP
Sbjct: 341 NPHFVCDARVLVKPYKEKGKVPDR--FRKLQHP 371
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TKAV++R++ L+P+N SKI+G LL+QD+ ++++IRLAF PDHL+++ ++ A+
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
L + P SP S PV P A P P +D Q Q
Sbjct: 61 L------AAKPASPPS-----------------PVLGPLHQTWGAPPHPSPTAGSDHQHQ 97
Query: 121 VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180
+ GY DF D +D + + S+ +
Sbjct: 98 APFAADLALGY------DFDGAGAGADAFFPDDYDCWSPAGAAHRRSFSLSDAEATAAAA 151
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHP 216
+ + C YF +GFCK+G++CR+ HG P
Sbjct: 152 GGAA-------WRPCMYFARGFCKNGSSCRFLHGFP 180
>gi|79316196|ref|NP_001030921.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|79456990|ref|NP_191904.2| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|46518429|gb|AAS99696.1| At3g63450 [Arabidopsis thaliana]
gi|332646962|gb|AEE80483.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646963|gb|AEE80484.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 404
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 17/172 (9%)
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDV 379
++++ +D+ K + E+ D SRQIYLTFPA+S F E+DVS+YFS FGPVQDV
Sbjct: 126 ALMMGDDLHKLGIWRPERIDLSATACPASRQIYLTFPADSIFREEDVSDYFSTFGPVQDV 185
Query: 380 RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQH 439
RIP QQKRMFGFVTF++ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ D+
Sbjct: 186 RIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKT------K 239
Query: 440 PMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQL 491
P + F G H LL K+ E E+A+EL+ RL +QL
Sbjct: 240 PSRDIMDFQLGGRAFH--------EDLLWKRRFE--ERALELQSTRLMNLQL 281
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+P N SKIIG LLLQDHGE++MIRLAF P +L++S+I +AK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|326491203|dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 94/131 (71%), Gaps = 12/131 (9%)
Query: 338 KSDPGGIVA---GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTF 394
+ D GG +A +RQIYLTFPA+STF+E+DVS+YFS +GPVQDVRIP QQKRMFGFVTF
Sbjct: 239 RMDRGGDLASNPAARQIYLTFPADSTFSEEDVSSYFSYYGPVQDVRIPYQQKRMFGFVTF 298
Query: 395 VFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTEL 454
V+AETV+ ILAKGNPHFVC ARVLVKPY+EK ++ DR K Q P GD
Sbjct: 299 VYAETVRLILAKGNPHFVCDARVLVKPYKEKGKVPDR--FRKFQAPQH-------GDFAG 349
Query: 455 HTMPRACNNSR 465
T P +SR
Sbjct: 350 CTTPTGLLDSR 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLI 54
MD E+TK V+ R+Q L P+ SKI+G LL+QD E DMIRLAF P+HL+ ++
Sbjct: 1 MDAYEATKVVFARVQALHPDLASKIMGMLLIQDKSEEDMIRLAFGPEHLLQGVV 54
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHP 216
K C Y+ +GFCK+G++CR+ HG P
Sbjct: 138 KPCMYYARGFCKNGSSCRFVHGLP 161
>gi|297821268|ref|XP_002878517.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
gi|297324355|gb|EFH54776.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 120/197 (60%), Gaps = 25/197 (12%)
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSK----FGP 375
++++ +D+ K + E+ D + SRQIYLTFPA+S F E+DVS+YFS FGP
Sbjct: 133 ALMMGDDLHKLGRWRPERIDLSAMACPASRQIYLTFPADSIFREEDVSDYFSMVVQYFGP 192
Query: 376 VQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVE 435
VQDVRIP QQKRMFGFVTF++ +TVK ILAKGNPHFVC +RVLVKPY+EK ++ D KY +
Sbjct: 193 VQDVRIPFQQKRMFGFVTFMYPDTVKSILAKGNPHFVCDSRVLVKPYKEKGKVPD-KYRD 251
Query: 436 KMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQLACKP 495
M F G H N LL K+ E E+A+EL+ RL +QL
Sbjct: 252 IMD--------FQLGGRAFHD-----NTQDLLWKRRFE--ERALELQSTRLMNLQL---- 292
Query: 496 MNHHSYFGYSMDELQVS 512
++ F S D+ VS
Sbjct: 293 LDVKKQFQLSFDQTFVS 309
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+P N SKI+G LLLQDHGE++MIRLAF P +L++S+I +AK
Sbjct: 1 MDVYEATRVVLSRIQSLDPANASKIMGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTR 93
L ++P DL + +S A +
Sbjct: 61 LDERLSFLAPRTGGCVSDDLGFGWGQYSYADCK 93
>gi|7573328|emb|CAB87798.1| putative protein [Arabidopsis thaliana]
Length = 399
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 139/258 (53%), Gaps = 21/258 (8%)
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDV 379
++++ +D+ K + E+ D SRQIYLTFPA+S F E+DVS+YFS FGPVQDV
Sbjct: 126 ALMMGDDLHKLGIWRPERIDLSATACPASRQIYLTFPADSIFREEDVSDYFSTFGPVQDV 185
Query: 380 RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDR------KY 433
RIP QQKRMFGFVTF++ ETVK ILAKGNPHFVC +RVLVKPY+EK ++ D+ +
Sbjct: 186 RIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKYRTKPSRD 245
Query: 434 VEKMQHPMFCSLHFTDGDTELHTMPRACNNSRL-LRKQLMEEHEQAIELERRRLSEMQLA 492
+ Q + F + EL + R N L + KQ +Q + + R +S Q
Sbjct: 246 IMDFQLDLLWKRRFEERALELQST-RLMNLQLLDVEKQFQLNFDQTLLVSPRLVSNNQRV 304
Query: 493 CKPMNHHSYFGYSMDELQVSEAPAEQG--DFPSAERFNYLLDVLNNGSTSEDQVSHISTH 550
C N D +++ E+ + D P ++ L+ G +E + S +S+
Sbjct: 305 CTKENDE-------DTIKLPESLEDDRLVDSPIVSPKHHFLEC---GVAAETKGSGLSSP 354
Query: 551 YNDQDSQGLNLPESPFAS 568
DQD + P S
Sbjct: 355 SFDQDESSTGTLKEPLKS 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+T+ V +RIQ L+P N SKIIG LLLQDHGE++MIRLAF P +L++S+I +AK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|357161178|ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 612
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 78/84 (92%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFPA+STF+E+DVS+YFS +GPVQDVRIP QQKRMFGFVTFV+AETV+ ILAKG
Sbjct: 254 ARQIYLTFPADSTFSEEDVSSYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVRLILAKG 313
Query: 408 NPHFVCGARVLVKPYREKSRLVDR 431
NPHFVC ARVLVKPY+EK ++ DR
Sbjct: 314 NPHFVCDARVLVKPYKEKGKVPDR 337
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V+ R+Q L+PE SKI+G LL+QD E DMIRLAF P+HL+++++ A+
Sbjct: 1 MDAYEATKVVFARVQALDPELASKIMGMLLVQDRSEEDMIRLAFGPEHLLHTVVARARAD 60
Query: 61 L 61
+
Sbjct: 61 I 61
>gi|414888139|tpg|DAA64153.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 734
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 76/85 (89%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAK 406
GSRQIYLTFPA+STF E+DVSNYFS +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAK
Sbjct: 362 GSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAK 421
Query: 407 GNPHFVCGARVLVKPYREKSRLVDR 431
GNPHF+C ARVLVKPY+EK ++ D+
Sbjct: 422 GNPHFICDARVLVKPYKEKGKVPDK 446
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 58/264 (21%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+TK V++RIQ L+P++ +KI+G+LL+QDHGE++MIRLAF P+ L+++++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGL------GKPTVSPPISPASVADLPLQFAPFSPASTRP-------------------- 94
LGL G PT + S L Q + A T P
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 ---VSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLT-- 149
VS+ A A A+ P A + F G + ++ LQ Q+ FL+
Sbjct: 121 NSVVSNGAPAEALAADLMSPAAAGNAPPS----PFFAAG--EPLLDELQLQEQLAFLSDA 174
Query: 150 --------LEDQFDSVNSVNSDFSSSYFYPEPALGHVRTS---RRSPSLPEFPV------ 192
L D + + + D ++ F+P ALG RRS S+ E +
Sbjct: 175 AAGGHQLPLFDASECRSPGSGD--AAGFFPYGALGWANGGPGHRRSSSVSELCLGGADGL 232
Query: 193 --KVCHYFNKGFCKHGNNCRYFHG 214
K C Y+ +G+CK+G+ CR+ HG
Sbjct: 233 GWKPCLYYARGYCKNGSACRFVHG 256
>gi|414887325|tpg|DAA63339.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 439
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 205/441 (46%), Gaps = 67/441 (15%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E + ++++ L P+N I+ Y++ E L + D+++ +L A
Sbjct: 1 MDIEECRTRLQDKVRLLHPKNAEGIVDYMIANTPLENIRSYLLTATDNVLMNLFEGANRL 60
Query: 61 LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120
I S + PL F F+P +D Q+ +Q Q
Sbjct: 61 QN---------ILNLSEENEPL-FGLFTP-------------------FD-QIGPQKQHQ 90
Query: 121 VNSIEFVQ----PGYSDTAAEDFCLQNQMQFLT-LEDQFDSVNSVNSDFSSSYFYPEPAL 175
+S Q P Y + F QN LT D F S++ ++ D S Y +
Sbjct: 91 FSSRNHSQVLQAPLYPIGPSGAF--QNPYSKLTGFRDHFQSLSILDGDTPSHYKCASINV 148
Query: 176 GHVRTSRRSPSLPEFPVKVCH-YFNKGFCKHGNNCRYFHGHPMPESFSQIFS-PNANDIR 233
G PS + K C Y + CK+G NC FS + P ND+R
Sbjct: 149 GGY------PSNGKVQTKTCRFYLSIRKCKYGENCH----------FSLVCGYPEINDMR 192
Query: 234 NEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHG 293
DH+ GSL+ LE EI LL Q + + L + E Y K L+ +G+ TE QR+
Sbjct: 193 QVDHL---GSLQMLEMEIDLLLLQPSS-QVPVDHLEKKFLEIYTKLLEIDGFHTEDQRNR 248
Query: 294 KAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGS--RQI 351
K GY LT L +L N+ R +R G++ V+L +D PKY+ + + + P +AGS +I
Sbjct: 249 KTGYGLTDLFMQL-NATRETER-RGRYYVVLVKDAPKYVTHGFQPAVP---LAGSDFNKI 303
Query: 352 YLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHF 411
+TF +ES FT DV NYFS++G V + R +++ M G V+FV ET K+I+++ PHF
Sbjct: 304 CVTFKSESIFTHTDVQNYFSQYGTVSEERFS-EERHMHGHVSFVDLETAKRIISESGPHF 362
Query: 412 VCGARVLVKPYREKSRLVDRK 432
+CG V K YREK L R+
Sbjct: 363 ICGNEVRAKAYREKHELNFRQ 383
>gi|297847524|ref|XP_002891643.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297337485|gb|EFH67902.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 101/148 (68%), Gaps = 14/148 (9%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
S+QIYLTFP+ES+FT++DVS YFS FGPV+DVRIP QQ+RMFGFVTF AETV+ ILA+G
Sbjct: 265 SKQIYLTFPSESSFTDEDVSTYFSDFGPVEDVRIPYQQQRMFGFVTFAKAETVRTILARG 324
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDT----------ELHTM 457
NPHF+C +RVLVKPY+EK +++ ++ +++ H + +++ + E
Sbjct: 325 NPHFICDSRVLVKPYKEKGKILQKRQQQQL-HELLERGNYSPSSSPSRMDSRDLYECRLG 383
Query: 458 PRACNNSR---LLRKQLMEEHEQAIELE 482
PR +N L RK + +QAIE+E
Sbjct: 384 PRMFSNKTQEMLRRKTEQADLQQAIEVE 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++++I+ LEPEN SK+IGY LLQD +RD+IR+AF PD LI + +AK
Sbjct: 1 MDPGDPTSIIFSKIRTLEPENASKVIGYFLLQDMEQRDLIRIAFGPDSLIQTFCRKAKSD 60
Query: 61 LGLGKPTVSPPIS 73
LGL S PI+
Sbjct: 61 LGLSSNGFSRPIN 73
>gi|77548504|gb|ABA91301.1| RNA recognition motif, putative [Oryza sativa Japonica Group]
Length = 401
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFP +S F+++DV NYFS +G VQDVRIP Q+KRMFGFVTF + +TVK ILAKG
Sbjct: 166 ARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFAYQKTVKLILAKG 225
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKY 433
NPH++C ARVLVKPY+EK ++ ++K+
Sbjct: 226 NPHYICDARVLVKPYKEKDKVPNKKF 251
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+TK V+ R+Q LEP IIG LL +D E DMI LA PD+L+ S+I + +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 LGLGKPTVSPPIS 73
L KP SPP++
Sbjct: 61 L-TNKP--SPPMA 70
>gi|222615430|gb|EEE51562.1| hypothetical protein OsJ_32780 [Oryza sativa Japonica Group]
Length = 400
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFP +S F+++DV NYFS +G VQDVRIP Q+KRMFGFVTF + +TVK ILAKG
Sbjct: 166 ARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFAYQKTVKLILAKG 225
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKY 433
NPH++C ARVLVKPY+EK ++ ++K+
Sbjct: 226 NPHYICDARVLVKPYKEKDKVPNKKF 251
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+TK V+ R+Q LEP IIG LL +D E DMI LA PD+L+ S+I + +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 LGLGKPTVSPPIS 73
L KP SPP++
Sbjct: 61 L-TNKP--SPPMA 70
>gi|30695000|ref|NP_849792.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194556|gb|AEE32677.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 513
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 76/90 (84%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
S+QIYLTFP+ES+FT++DVS YF FG V DVRIP QQ+RM+GFVTF AETV+ ILA+G
Sbjct: 265 SKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARG 324
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKM 437
NPHF+C +RVLVKPY+EK +++ ++ +++
Sbjct: 325 NPHFICDSRVLVKPYKEKGKILQKRQQQQL 354
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++++I+ E EN S++I Y LLQD +RD+IR+AF PD LI + +AK+
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLGKPTVSPPIS 73
LG S PI+
Sbjct: 61 LGFSSNGFSRPIN 73
>gi|15217946|ref|NP_175563.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325355|gb|AAG52614.1|AC024261_1 unknown protein; 33958-32214 [Arabidopsis thaliana]
gi|20268750|gb|AAM14078.1| unknown protein [Arabidopsis thaliana]
gi|21281143|gb|AAM45048.1| unknown protein [Arabidopsis thaliana]
gi|332194555|gb|AEE32676.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 414
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 76/90 (84%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
S+QIYLTFP+ES+FT++DVS YF FG V DVRIP QQ+RM+GFVTF AETV+ ILA+G
Sbjct: 265 SKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARG 324
Query: 408 NPHFVCGARVLVKPYREKSRLVDRKYVEKM 437
NPHF+C +RVLVKPY+EK +++ ++ +++
Sbjct: 325 NPHFICDSRVLVKPYKEKGKILQKRQQQQL 354
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD + T ++++I+ E EN S++I Y LLQD +RD+IR+AF PD LI + +AK+
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLGKPTVSPPIS----PASVADLPLQFAPFSPASTRPVSSPASM 101
LG S PI+ S + F FS + P+SS ++
Sbjct: 61 LGFSSNGFSRPINIHGQSLSSSSPRNGFLEFSRNPSNPLSSSLTL 105
>gi|77552901|gb|ABA95697.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
Length = 480
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 106/184 (57%), Gaps = 18/184 (9%)
Query: 346 AGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILA 405
+RQIYLTFP +S F+++DV NYFS +G VQDVRIP Q+K MFGFVTF + +TVK ILA
Sbjct: 164 CSARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILA 223
Query: 406 KGNPHFVCGARVLVKPYREKSRLVDR-KYVEKMQHPMFCSLHFTDGDTELHTMPR----- 459
KGNPH++C ARVLVKPY+EK ++ ++ ++V P+ H + + PR
Sbjct: 224 KGNPHYICDARVLVKPYKEKDKVPNKFRHVNHCLIPLRIFAHILPFECYIVLGPRILYRD 283
Query: 460 -ACNNSRLLRKQLMEEHEQAIELERRRLSEMQL---------ACKPMNHHSYFGYSMDEL 509
A + + KQ +E + A EL+R L + L PM H G ++
Sbjct: 284 IASHEASFRMKQ--DEQQHATELQRCCLMRLPLLNLQDWGHHLSSPMGSHVLLGQVDNKY 341
Query: 510 QVSE 513
++E
Sbjct: 342 NINE 345
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+TK V+ R+Q LEP IIG LL +D+ E DMIRLA PD+L+ S+I + +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LGLGKPTVSPPIS 73
L KP SPP++
Sbjct: 61 L-TNKP--SPPMA 70
>gi|218185150|gb|EEC67577.1| hypothetical protein OsI_34930 [Oryza sativa Indica Group]
Length = 581
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFP +S F+++DV NYFS +G VQDVRIP Q+KRMFGFVTF + +TVK ILAKG
Sbjct: 317 ARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFTYQKTVKLILAKG 376
Query: 408 NPHFVCGARVLVKPYREKSRLVDR-KYVEKMQHPMFCSLHFTDGDTELH 455
NPH++C ARVLVKPY+EK ++ ++ ++V P+ H D H
Sbjct: 377 NPHYICDARVLVKPYKEKDKVPNKFRHVNHCLIPLCIFAHILPFDWGHH 425
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+TK V+ R+Q LEP IIG LL +D+ E DMI LA PD+L+ S+I + +
Sbjct: 152 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIHLACGPDNLLQSIIAKVRTD 211
Query: 61 LGLGKPTVSPPIS 73
L KP SPP++
Sbjct: 212 L-TNKP--SPPMA 221
>gi|242050694|ref|XP_002463091.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
gi|241926468|gb|EER99612.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
Length = 211
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 274 EKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLE 333
++YGK L+ EG + + Q+ GKAG SLT +L RL N+ R+I+R G ++ ED P YL
Sbjct: 2 DRYGKPLRNEGLIIDGQQQGKAGCSLTDVLMRL-NTTRVIER-KGHQYIVPVEDAPMYLA 59
Query: 334 YSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVT 393
++ K + S QI++ F S FTE+DV +YFS++G V +VRIP Q KRM+GFV+
Sbjct: 60 HA-FKLGMSPASSNSNQIFVVFMPGSKFTEEDVHSYFSQYGTVSNVRIPPQGKRMYGFVS 118
Query: 394 FVFAETVKQILAKGNPHFVCGARVLVKPYREKSRL 428
F T ++IL++ PHF+CG RV VK Y++K L
Sbjct: 119 FQDPGTAERILSERTPHFICGDRVCVKAYKDKDEL 153
>gi|414866610|tpg|DAA45167.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 292
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 118/232 (50%), Gaps = 31/232 (13%)
Query: 371 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
S +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D
Sbjct: 4 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 63
Query: 431 RKYVEKMQHPMFCSLHFTDGDT----ELHTMP------RACNNSRLLRKQLME-----EH 475
+ ++ C+ D +LH + N LLR++L E E
Sbjct: 64 KYRKQQQGDFSGCTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAEL 123
Query: 476 EQAIELERRRLSEMQL-------------ACKPMNHHSYFGYSMDELQVSEAPAEQGDFP 522
+ AIEL+ RRL +QL P+ + + + + V E+P E G+
Sbjct: 124 QHAIELQSRRLMGLQLLDLKARAAATASALPTPIANAFASSHPLSTMAV-ESPLESGEQL 182
Query: 523 SAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSQGL-NLPESPFASPIGSG 573
+ LD NG E+ S D D G NLP+SPFASP S
Sbjct: 183 KLSS-GFALDGKLNGGDKEESACEASPDAADSDQSGEHNLPDSPFASPTKSA 233
>gi|218186344|gb|EEC68771.1| hypothetical protein OsI_37303 [Oryza sativa Indica Group]
Length = 430
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 71/84 (84%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFP +S F+++DV NYFS +G VQDVRIP Q+K MFGFVTF + +TVK ILAKG
Sbjct: 166 ARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILAKG 225
Query: 408 NPHFVCGARVLVKPYREKSRLVDR 431
NPH++C ARVLVKPY+EK ++ ++
Sbjct: 226 NPHYICDARVLVKPYKEKDKVPNK 249
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+TK V+ R+Q LEP IIG LL +D+ E DMIRLA PD+L+ S+I + +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LGLGKPTVSPPIS 73
L KP SPP++
Sbjct: 61 L-TNKP--SPPMA 70
>gi|222616541|gb|EEE52673.1| hypothetical protein OsJ_35055 [Oryza sativa Japonica Group]
Length = 430
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 71/84 (84%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+RQIYLTFP +S F+++DV NYFS +G VQDVRIP Q+K MFGFVTF + +TVK ILAKG
Sbjct: 166 ARQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILAKG 225
Query: 408 NPHFVCGARVLVKPYREKSRLVDR 431
NPH++C ARVLVKPY+EK ++ ++
Sbjct: 226 NPHYICDARVLVKPYKEKDKVPNK 249
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
M E+TK V+ R+Q LEP IIG LL +D+ E DMIRLA PD+L+ S+I + +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LGLGKPTVSPPIS 73
L KP SPP++
Sbjct: 61 L-TNKP--SPPMA 70
>gi|357116531|ref|XP_003560034.1| PREDICTED: putative zinc finger CCCH domain-containing protein
51-like [Brachypodium distachyon]
Length = 522
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 140/289 (48%), Gaps = 56/289 (19%)
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
+ RS L P + Y + G CK G +CR+ HG
Sbjct: 119 ASRSEQLANIPCRF--YMSTGVCKKGWSCRFSHGF------------------------- 151
Query: 241 PGSLERLEAEITELLKQRRGFPIS-IASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSL 299
G L LE I ELL R P++ +A LP+ Y Y + LQ G+ +S S+
Sbjct: 152 -GPLGMLEMAIRELLMNR---PLTRVADLPV-YLACYKQPLQ--GWWNQSTG------SI 198
Query: 300 TKLLARLKNSIRLIDRPHGQHSVILAEDVPKYL--EYSGEKSDPGGIVAGSRQIYLTFPA 357
LLARL ++DR GQ+ ++L E P YL + D G +G +IY+TF A
Sbjct: 199 ISLLARLHTVTLIVDR-MGQNFIVLLEHAPSYLGPAVNLNVMDTG---SGFNKIYITFTA 254
Query: 358 E--STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNP---HFV 412
E + TE VSNYFS++GPV VR+P R+ GFVTF + +TV+ +L + NP HF+
Sbjct: 255 EGRARCTESLVSNYFSQYGPVLKVRMP--TPRLCGFVTFQYPQTVELLLFEWNPQVPHFI 312
Query: 413 CGARVLVKPYRE--KSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPR 459
CGA VLVKPY+ +++ + E+ C + G++ + P+
Sbjct: 313 CGATVLVKPYKHSGETKPGNINIAERNGLQRGCDVGIVTGNSSVMIAPQ 361
>gi|414873767|tpg|DAA52324.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 485
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 421
Q VSNYFS FGPVQDVRIP QQK MFGFVTFV+AETVK I +KGNPHFVC ARVLVKP
Sbjct: 372 ARQIVSNYFSMFGPVQDVRIPYQQKHMFGFVTFVYAETVKVIPSKGNPHFVCYARVLVKP 431
Query: 422 YREKSRLVDRKYVEKMQHPMFCSLHFTD 449
Y+EK ++ R K+QH F D
Sbjct: 432 YKEKGKIPGR--FRKLQHAHHGGAEFGD 457
>gi|218192754|gb|EEC75181.1| hypothetical protein OsI_11409 [Oryza sativa Indica Group]
Length = 221
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 55/63 (87%)
Query: 371 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
S +GPV DVRIP QQKRMFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D
Sbjct: 6 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 65
Query: 431 RKY 433
+K+
Sbjct: 66 KKH 68
>gi|413922880|gb|AFW62812.1| putative cytochrome P450 superfamily protein [Zea mays]
Length = 944
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
Query: 376 VQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVE 435
+QDVRIP QQKRMFGFVTFV+AETVK IL+KGNPHFVC ARVLVKPY+EK ++ R
Sbjct: 636 LQDVRIPYQQKRMFGFVTFVYAETVKVILSKGNPHFVCDARVLVKPYKEKGKVPGR--FR 693
Query: 436 KMQH 439
K+QH
Sbjct: 694 KLQH 697
>gi|242050692|ref|XP_002463090.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
gi|241926467|gb|EER99611.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
Length = 250
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 27/203 (13%)
Query: 243 SLERL---EAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAG-YS 298
SLERL EI +LL ++ + I LPM+Y+ KYGK+L + E Q+ G+ G YS
Sbjct: 53 SLERLPLLGEEIRQLLISQQPSVVPIEHLPMIYFAKYGKSLFVTDFKPEVQQLGEKGSYS 112
Query: 299 LTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA--GSRQ---IYL 353
L LL RL ++I++I+R HGQ L D LE SG +D ++A +R IY+
Sbjct: 113 LICLLMRL-DTIKVIERFHGQQCAALGGDA---LESSGSAADSKLVLAPPNTRHIVTIYI 168
Query: 354 TFPAESTFTEQDVSNYF---------SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQIL 404
F +STFT + +YF KFGPV ++I M G+V+F++ ETVK +L
Sbjct: 169 AFSRQSTFTVRGAWSYFRYCQFAISVRKFGPVTFLQI---LGAMRGWVSFLYPETVKLLL 225
Query: 405 A--KGNPHFVCGARVLVKPYREK 425
+ + N H + GA V + EK
Sbjct: 226 SETRSNRHLILGAVVHIFSSMEK 248
>gi|212275268|ref|NP_001130674.1| uncharacterized protein LOC100191777 [Zea mays]
gi|194689800|gb|ACF78984.1| unknown [Zea mays]
Length = 259
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 98/204 (48%), Gaps = 36/204 (17%)
Query: 388 MFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHF 447
MFGFVTFV+ ETVK ILAKGNPHF+C ARVLVKPY+EK ++ D+ +++Q F
Sbjct: 1 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDF-F 59
Query: 448 TDG------DTELHTMPRA------CNNSRLLRKQ-------LMEEHEQAIELERRRLSE 488
++G +LH + N LLR++ E +QA+EL+ RRL
Sbjct: 60 SNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMR 119
Query: 489 MQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHIS 548
+QL +L+ +P+ G P +D + E S
Sbjct: 120 LQLL---------------DLKPRASPSPIGSMPLGPT-QRAVDSPPDSGREESSAGDAS 163
Query: 549 THYNDQDSQGLNLPESPFASPIGS 572
+ + S NLP+SPFASP S
Sbjct: 164 PNADSDQSAEHNLPDSPFASPTRS 187
>gi|296089905|emb|CBI39724.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 270 MMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVP 329
M+YYE+YG+ LQ+E LTESQ+HG+AGY TKL ARL+ +IRLI+ PHGQH +IL E VP
Sbjct: 1 MIYYERYGRGLQSELSLTESQQHGEAGYDSTKLQARLR-TIRLINGPHGQHPIILTEYVP 59
Query: 330 KYLE 333
KY+E
Sbjct: 60 KYVE 63
>gi|414887324|tpg|DAA63338.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 141
Score = 85.5 bits (210), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 346 AGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM-FGFVTFVFAETVKQIL 404
+ S +I++TF FT V YFS++G V +V IP QKR FGFV+F+ +E+VKQIL
Sbjct: 14 SASNKIFITFNCIHIFTHTSVQKYFSQYGTVNEVIIPIMQKRPDFGFVSFLDSESVKQIL 73
Query: 405 AKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQH 439
++ PHF+CG V VK YREK L EK H
Sbjct: 74 SERGPHFICGNEVHVKAYREKHELEYMMLTEKDIH 108
>gi|295913262|gb|ADG57888.1| transcription factor [Lycoris longituba]
Length = 180
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 85/200 (42%), Gaps = 56/200 (28%)
Query: 190 FPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEA 249
F K C ++ +GFCK+G+ CR+ HG +DI +E
Sbjct: 32 FGWKPCLHYQRGFCKNGSACRFLHGP-------------VDDISAS-----------VEQ 67
Query: 250 EITELLKQRRGFPISIASLPMMYYEKYG----KTLQAEGYLTESQRHGKAGYSLTKLLAR 305
E+ + + + S A+ P Y G K + ESQR L +
Sbjct: 68 ELMLMRSKSQRLAASAAAFP---YSPTGSSSNKCFKFMLQQNESQRAAAVALMLESENQK 124
Query: 306 LKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVA-GSRQIYLTFPAESTFTEQ 364
RL E+SD GIV SRQIYLTFPA+STF E+
Sbjct: 125 FMGRARL------------------------ERSDFAGIVNPSSRQIYLTFPADSTFREE 160
Query: 365 DVSNYFSKFGPVQDVRIPCQ 384
DVSNYFS +GPVQDVRIP Q
Sbjct: 161 DVSNYFSIYGPVQDVRIPYQ 180
>gi|297847526|ref|XP_002891644.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
gi|297337486|gb|EFH67903.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 316 PHGQHSVILAEDVP-KYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFG 374
P+ Q +I A P ++ SG+ GG + S Q + P +SN FG
Sbjct: 140 PNQQQRMIAAHGSPMSNIQGSGQFGVEGGFGSPSEQKRMIAPLFMGDFGSPMSNI--NFG 197
Query: 375 PVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYV 434
PV DVRIP Q++RMFGFVTF AETV +LA+GN H + + ++ ++L++R+ +
Sbjct: 198 PVVDVRIPNQERRMFGFVTFANAETVTTVLAQGNSHLIGES-----AQQQLNQLLERENL 252
Query: 435 EKMQHPMFCSLHFTDGDTELH--TMPRACNNSRLLRKQLMEEHEQAIELE--RRRLSEMQ 490
+ HP + D D M R R+ + + +QAIE+E RRRL ++
Sbjct: 253 --LHHPRLSGMDPRDQDESRFGPMMFRNPTQEMRQRRNVQADLQQAIEVEDQRRRLLNLK 310
Query: 491 L---ACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHI 547
L K ++HH Q S + A FPS R + E + +
Sbjct: 311 LPDMENKSIHHH----------QRSPSIASPAHFPSQVR-------EGDSGIGEKDLEQV 353
Query: 548 ST----HYNDQDSQGLNLPESPFASPIGSGISTVI 578
+T H + S LP+S F S SG ++ +
Sbjct: 354 ATSNEEHQGQERSLENTLPDSSFGSSNKSGQTSRV 388
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDH 48
MD T + RI LEPEN KIIGY LLQD + D+I+LAF D
Sbjct: 1 MDPGGPTATIIERIITLEPENAFKIIGYFLLQDIEDCDLIQLAFGTDQ 48
>gi|449532871|ref|XP_004173401.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like,
partial [Cucumis sativus]
Length = 156
Score = 78.6 bits (192), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 51/63 (80%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
MD E+++ V++RIQ L+PEN SKI+G LL+QDHGE++MIRLAF P+ L++S+I +AK
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LGL 63
L L
Sbjct: 61 LSL 63
>gi|27817839|dbj|BAC55607.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 552
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 15/159 (9%)
Query: 330 KYLEYSGEKSDPGGIVAGSRQIYLTFPAEST-FTEQDVSNYFSKFGPVQDVRIPCQ---Q 385
++ ++ GE SD IY+T + T++++ +YF KFGPV +V + C+ +
Sbjct: 195 RHRDFFGEGSD--------FTIYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGNE 246
Query: 386 KRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSL 445
K FGFVTF A+TV +L+K PHF+ G +V VK Y E ++ RK ++ H F ++
Sbjct: 247 KYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQENDH--FDNV 304
Query: 446 -HFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELER 483
H T MPR N+++L + E H Q + R
Sbjct: 305 AHRTSCANAFDGMPRDYLNAQVLGSGVPELHNQRLSHPR 343
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 351 IYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAKG 407
IY+T A++ T +++ +YF KFGPV +V IP + +K FGFVTF +TV +L+K
Sbjct: 375 IYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKS 433
Query: 408 NPHFVCGARV 417
H + G +
Sbjct: 434 TSHSISGVEL 443
>gi|147786960|emb|CAN60075.1| hypothetical protein VITISV_017592 [Vitis vinifera]
Length = 498
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 12/94 (12%)
Query: 33 DHGERDMIRLAFSPDHLIYSLINEAKMKLGLG-KPTVSPPIS-----PASVADLPLQFAP 86
+HGER IRLAF+PD++I LINEAK +LGL K VS PIS P+ V+DLPLQ P
Sbjct: 51 NHGERGRIRLAFNPDNVIQYLINEAKTELGLSLKLVVSNPISPPHVNPSLVSDLPLQLTP 110
Query: 87 FSPASTRPV-SSPASMRAAASPFWDPQMAADQQQ 119
FSPAS P SSP + + PQ+ D +Q
Sbjct: 111 FSPASAWPFPSSP-----PGNSYLGPQVNGDXRQ 139
>gi|222637348|gb|EEE67480.1| hypothetical protein OsJ_24899 [Oryza sativa Japonica Group]
Length = 739
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 15/159 (9%)
Query: 330 KYLEYSGEKSDPGGIVAGSRQIYLTFPAEST-FTEQDVSNYFSKFGPVQDVRIPCQ---Q 385
++ ++ GE SD IY+T + T++++ +YF KFGPV +V + C+ +
Sbjct: 299 RHRDFFGEGSD--------FTIYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGNE 350
Query: 386 KRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSL 445
K FGFVTF A+TV +L+K PHF+ G +V VK Y E ++ RK ++ H F ++
Sbjct: 351 KYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQENDH--FDNV 408
Query: 446 -HFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELER 483
H T MPR N+++L + E H Q + R
Sbjct: 409 AHRTSCANAFDGMPRDYLNAQVLGSGVPELHNQRLSHPR 447
>gi|334183229|ref|NP_001185197.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194558|gb|AEE32679.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 403
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 47/279 (16%)
Query: 316 PHGQHSVILAEDVP-KYLEYSGEKSDPGGIVAGSRQIYLTFP----------AESTFTEQ 364
P+ Q +I P ++ SG+ GG + S Q + P + +FT+Q
Sbjct: 130 PNQQQRMIATHGSPVSNIQGSGQFGIEGGFGSPSEQQRMIAPQFMGDFGSRMSNISFTDQ 189
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
VS YF FGPV VRIP Q+++++GFV+F AETV IL + NPH + + V V
Sbjct: 190 HVSTYFGNFGPVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPVNVTAAAT 249
Query: 425 KSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELER- 483
+ + R+ P E H M L R + +QAIE+E
Sbjct: 250 TAGVGWREPFSVGNGPKGAMSRPRRFRNETHEM--------LQRNTEQADPQQAIEVEDQ 301
Query: 484 -RRLSEMQLAC---KPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGS- 538
RRLS +QL K ++HH Q S + FPS V GS
Sbjct: 302 IRRLSNLQLPGMENKSIHHH----------QPSPSIGSHAHFPS--------QVREGGSG 343
Query: 539 TSEDQVSHIST----HYNDQDSQGLNLPESPFASPIGSG 573
T E + + T H + S LP+S F S SG
Sbjct: 344 TGEKDLEQVETSNEEHQGQEKSLENTLPDSSFGSTKESG 382
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSP 46
M ++ + RI LEPE+ KIIGY+L QD G ++IRLAF P
Sbjct: 1 MQPGDAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP 46
>gi|297725823|ref|NP_001175275.1| Os07g0583500 [Oryza sativa Japonica Group]
gi|255677923|dbj|BAH94003.1| Os07g0583500 [Oryza sativa Japonica Group]
Length = 998
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 351 IYLTFPAES-TFTEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAK 406
IY+T + T++++ +YF KFGPV +V + C+ +K FGFVTF A+TV +L+K
Sbjct: 222 IYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGNEKYTFGFVTFENADTVSLLLSK 281
Query: 407 GNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSL-HFTDGDTELHTMPRACNNSR 465
PHF+ G +V VK Y E ++ RK ++ H F ++ H T MPR N++
Sbjct: 282 STPHFIFGVKVRVKRYLEWTKQEQRKLPQENDH--FDNVAHRTSCANAFDGMPRDYLNAQ 339
Query: 466 LLRKQLMEEHEQAI 479
+L + E H Q +
Sbjct: 340 VLGSGVPELHNQRL 353
>gi|147859914|emb|CAN78898.1| hypothetical protein VITISV_011188 [Vitis vinifera]
Length = 337
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 8/62 (12%)
Query: 417 VLVKPYREK--SRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRK-QLME 473
+LVKP+REK SR+VDR+ Q+PM+ S HF D DT+ ++ R C++SRLL K QLME
Sbjct: 95 ILVKPHREKASSRIVDRR-----QYPMYYSPHFIDRDTKFQSITRICDDSRLLGKHQLME 149
Query: 474 EH 475
EH
Sbjct: 150 EH 151
>gi|218199913|gb|EEC82340.1| hypothetical protein OsI_26639 [Oryza sativa Indica Group]
Length = 243
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 368 NYFS---KFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 421
NY S KFGPV +V + C+ +K FGFVTF A+ V +L+K PHF+ G +V VK
Sbjct: 16 NYLSLPRKFGPVINVYLSCKPGNEKYTFGFVTFENADMVSLLLSKSTPHFIFGVKVRVKR 75
Query: 422 YREKSRLVDRKYVEKMQHPMFCSL-HFTDGDTELHTMPRACNNSRLLRKQLMEEHEQ 477
Y E ++ RK ++ H F ++ H T MPR N+++L + E H Q
Sbjct: 76 YLEWTKQEQRKLPQENDH--FDNVAHRTSCANAFDGMPRDYLNAQVLGSGVPELHNQ 130
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 351 IYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAKG 407
IY+T A++ T +++ +YF KFGPV +V IP + +K FGFVTF +TV +L+K
Sbjct: 168 IYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKS 226
Query: 408 NPHFVCGARVLVK 420
H + G V VK
Sbjct: 227 TSHSISGVEVRVK 239
>gi|15217947|ref|NP_175564.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325375|gb|AAG52634.1|AC024261_21 hypothetical protein; 30893-28595 [Arabidopsis thaliana]
gi|332194557|gb|AEE32678.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 391
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 109/269 (40%), Gaps = 39/269 (14%)
Query: 316 PHGQHSVILAEDVP-KYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFG 374
P+ Q +I P ++ SG+ GG + S Q + P +SN FG
Sbjct: 130 PNQQQRMIATHGSPVSNIQGSGQFGIEGGFGSPSEQQRMIAPQFMGDFGSRMSNI--NFG 187
Query: 375 PVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYV 434
PV VRIP Q+++++GFV+F AETV IL + NPH + + V V + + R+
Sbjct: 188 PVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPVNVTAAATTAGVGWREPF 247
Query: 435 EKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELER--RRLSEMQLA 492
P E H M L R + +QAIE+E RRLS +QL
Sbjct: 248 SVGNGPKGAMSRPRRFRNETHEM--------LQRNTEQADPQQAIEVEDQIRRLSNLQLP 299
Query: 493 C---KPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGS-TSEDQVSHIS 548
K ++HH Q S + FPS V GS T E + +
Sbjct: 300 GMENKSIHHH----------QPSPSIGSHAHFPS--------QVREGGSGTGEKDLEQVE 341
Query: 549 T----HYNDQDSQGLNLPESPFASPIGSG 573
T H + S LP+S F S SG
Sbjct: 342 TSNEEHQGQEKSLENTLPDSSFGSTKESG 370
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSP 46
M ++ + RI LEPE+ KIIGY+L QD G ++IRLAF P
Sbjct: 1 MQPGDAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP 46
>gi|405960878|gb|EKC26752.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 420
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 230 NDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMM--------YYEKYGKTLQ 281
++ R D + +PGS R + ++R + + LP Y+ ++G+ L
Sbjct: 102 DNKRKGDDIENPGSKTRR-------MDKKRCVDLIVLGLPWKSTEEDMRKYFSQFGELL- 153
Query: 282 AEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDP 341
L + +R GK G S R + + Q +I + S E+S P
Sbjct: 154 ----LVQVKRDGKTGQSKGFGFVRFGD-FEAQSKCLAQRHMIDGRWCEVNIPASNEQSGP 208
Query: 342 GGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVK 401
+R++++ +E T D+ YFSKFG V DV IP + R F FVTF+ AE +
Sbjct: 209 ----PMNRKVFIARCSED-ITADDLHKYFSKFGEVSDVFIP-KPFRAFAFVTFMDAEIAQ 262
Query: 402 QILAKGNPHFVCGARVLVKPYREKS 426
+ G H + G V V KS
Sbjct: 263 SLC--GEDHIIKGTSVHVSSATPKS 285
>gi|156382516|ref|XP_001632599.1| predicted protein [Nematostella vectensis]
gi|156219657|gb|EDO40536.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE ++ +FS FGPV DVRI C ++ + FGF+TF E K+++ + N F +
Sbjct: 29 TELELETFFSNFGPVADVRIVCDRRTGLNKGFGFITFSLEEPAKKLIEQNNIDFKGRSLR 88
Query: 418 LVKPYREKSR---LVDRKYVEK 436
L + R+K L + +Y +K
Sbjct: 89 LRQAIRKKGSSQYLTNEEYSQK 110
>gi|391331401|ref|XP_003740135.1| PREDICTED: TAR DNA-binding protein 43-like [Metaseiulus
occidentalis]
Length = 479
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKY 331
Y+E +G+ L A+ + K G+ + + ++ IR++ + H +P
Sbjct: 131 YFEAFGEVLMAQVKKDPKTQQSK-GFGFIRF-SSYESQIRVLSKRHMIDGRWCDVKIPNS 188
Query: 332 LEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGF 391
+ G+ S+ SR++++ E T D+ +YFSKFG V DV IP + R F F
Sbjct: 189 RD--GQASEL------SRKVFVGRCTED-LTADDLRDYFSKFGEVTDVFIP-KPFRAFAF 238
Query: 392 VTFVFAETVKQILAKGNPHFVCGARVLV 419
VTFV AE + + G H + G + V
Sbjct: 239 VTFVDAEVAQSLC--GEDHIIKGTSIHV 264
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ YFSKFG V DV I + R FGFVTF E ++ +L K PH V G ++
Sbjct: 75 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFTAKEAIEAVL-KATPHTVKGKQIDP 133
Query: 420 KPYREK 425
KP + +
Sbjct: 134 KPAKAR 139
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQ 402
G ++I++ ES E D+ YF KFGPV++V +P Q+R F FVTF ++V+
Sbjct: 141 GIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVEL 199
Query: 403 IL 404
+
Sbjct: 200 VC 201
>gi|85000983|ref|XP_955210.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303356|emb|CAI75734.1| RNA-binding protein, putative [Theileria annulata]
Length = 406
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ-----KRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
T+ D+ +YF KFG V D P Q + FGF++F E++K++ G PH + G
Sbjct: 124 TKDDLEDYFKKFGTVYDAYCPKQNNYSGLNKGFGFISFENEESIKKVFETG-PHVIMGRE 182
Query: 417 VLV 419
V+V
Sbjct: 183 VIV 185
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T TE ++ YFS +G + + +I K R FGFVTF ++V+QI + G H + G
Sbjct: 178 TLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGK 237
Query: 416 RVLVK 420
RV +K
Sbjct: 238 RVEIK 242
>gi|321476369|gb|EFX87330.1| hypothetical protein DAPPUDRAFT_97182 [Daphnia pulex]
Length = 266
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 227 PNANDIRNEDH-VFSPGSLERLEAEITELLKQRRGFPISIASLPM-MYYEKYGKTLQAEG 284
P N +++DH S +R+E + G P + + +Y+E +G+ L A+
Sbjct: 79 PKENKRKSDDHPENSTAKTKRMEMRLKCSDLIVLGLPWKTSEQDLRVYFENFGELLMAQ- 137
Query: 285 YLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGG 343
+ + + G++ G+ + A + +R++ + H +P S GG
Sbjct: 138 -VKKDAKTGQSKGFGFIRF-ANYDSQVRVLSQRHLIDGRWCDVKIPN--------SKAGG 187
Query: 344 IVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQI 403
++++ E T D+ +YF KFG V DV IP + R F FVTF+ E + +
Sbjct: 188 TPQVPCKVFVGRCTED-ITADDLRDYFCKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSL 245
Query: 404 LAKGNPHFVCGARVLVKPYR 423
G H + G+R ++ R
Sbjct: 246 C--GEDHIIKGSRCALEQVR 263
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 329 PKYLEYSGEKSDPGGIVAGSRQIYLTFPA--------------ESTFTEQDVSNYFSKFG 374
P+Y E + + + G +G + Y P+ + +E+D++N FSKFG
Sbjct: 139 PRYREGNRYRDNNAGARSGPVRRYDDRPSNAETPKSKVFVGNLDGKVSEEDLTNAFSKFG 198
Query: 375 PVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYV 434
P+ + +R F FV FV + + + + N + G ++ V P+ E+S K
Sbjct: 199 PINKI----DYRRNFAFVDFVKSRDAEVAMREMNERVLLGTKLKVVPHSERS-----KRS 249
Query: 435 EKMQHPMFCS 444
E + P F S
Sbjct: 250 ETNREPDFAS 259
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
TE D ++F K+GPV D +I ++ R FGF+ F + V +LA GN + GA
Sbjct: 121 ALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGA 180
Query: 416 RVLVK 420
+V +K
Sbjct: 181 KVEIK 185
>gi|258597221|ref|XP_001347758.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
gi|254832603|gb|AAN35671.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
Length = 588
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 362 TEQDVSNYFSKFGPVQDV----RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
+++D+ YFSKFG + D+ I + + FGFV+F E++ ++L K H +CG +
Sbjct: 238 SKKDLEKYFSKFGKIVDIYVSRNISNNKNKGFGFVSFEKQESMNKVL-KEKLHIICGKEI 296
Query: 418 LV 419
+V
Sbjct: 297 VV 298
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 341 PGGIVAGSR--QIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTF 394
PGG R ++++T +T E+ + NYF KFG + D+ +P + R FVTF
Sbjct: 492 PGGDEWNKRGYKLFVTKLNSATTIEK-LRNYFEKFGEIIDIYMPNDVYTNRPRGIAFVTF 550
Query: 395 VFAETVKQILA-KGNPHFVCGARVLV 419
+ E+VK IL+ + + H + G V++
Sbjct: 551 LDNESVKNILSDEHSKHIIDGKEVVL 576
>gi|428671713|gb|EKX72628.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 399
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ-----KRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
TE D+ YFSKFG V D P QQ + FGF++F E ++++ + PH + G
Sbjct: 134 TEDDLEEYFSKFGTVHDAYCPRQQNNSNLNKGFGFISFDNEEAIQKVF-ETVPHIIMGRE 192
Query: 417 VLV 419
V+V
Sbjct: 193 VIV 195
>gi|357447963|ref|XP_003594257.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483305|gb|AES64508.1| RNA-binding protein, putative [Medicago truncatula]
Length = 411
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D NYF +FG + DV + Q+ R FGF+T+ E V+++L K H + G
Sbjct: 45 STVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHK-TFHELNG 103
Query: 415 ARVLVK 420
V VK
Sbjct: 104 KMVEVK 109
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T TE++ ++F+++G V+D +I + R FGFVTF + V +L++GN + G
Sbjct: 138 ATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAG 197
Query: 415 ARVLVK 420
A+V +K
Sbjct: 198 AQVEIK 203
>gi|413925207|gb|AFW65139.1| hypothetical protein ZEAMMB73_790427, partial [Zea mays]
Length = 221
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++F+++G V D +I ++ R FGF+ F + V +LA GN + G
Sbjct: 124 STLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAG 183
Query: 415 ARVLVKPYREKSRLVDRKYVE---KMQHPMFCSLHF 447
++V +K E + +V V+ K+ +FC L F
Sbjct: 184 SKVSLKFIIEMTPMVVSSIVDLWCKICKVVFCILLF 219
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++FSK+G V++ +I + R FGF+ F E V +IL++GN + G
Sbjct: 101 STVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAG 160
Query: 415 ARVLVKPYREKSRLVDRKYVE 435
+V + + +++ V+ K E
Sbjct: 161 TQVSILQWSPRNKHVEIKKAE 181
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D NYF +FG + DV + Q+ R FGF+T+ E V+++
Sbjct: 70 TKKIFVGGLA-STVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 128
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 129 LHK-TFHELNGKMVEVK 144
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D ++F K+G V D +I ++ R FGFV F + V +LA GN + G
Sbjct: 121 STLTEDDFKDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANGNMIDLAG 180
Query: 415 ARVLVK 420
++V +K
Sbjct: 181 SKVEIK 186
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ-----KRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
T+ D+ +YF KFG V D P Q + FGF++F ++++++ G PH + G
Sbjct: 130 TKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISFENEDSIRKVFESG-PHVIMGRE 188
Query: 417 VLV 419
V+V
Sbjct: 189 VIV 191
>gi|307110322|gb|EFN58558.1| hypothetical protein CHLNCDRAFT_140687 [Chlorella variabilis]
Length = 619
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP-----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
+EQDV ++F +FG V DV +P ++ R FGFVTF +++++A G PH + G+
Sbjct: 488 SEQDVKDHFMRFGFVLDVYLPRDKNNKREHRGFGFVTFETEAAIQRVVAHG-PHHIKGSI 546
Query: 417 VLV 419
V +
Sbjct: 547 VAI 549
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ YFSKFG V DV I + R FGFVTF + ++ +L K PH V G ++
Sbjct: 75 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDP 133
Query: 420 KPYREK 425
KP + +
Sbjct: 134 KPAKAR 139
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQ 402
G ++I++ ES E D+ YF KFGPV++V +P Q+R F FVTF ++V+
Sbjct: 141 GIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVEL 199
Query: 403 I 403
+
Sbjct: 200 V 200
>gi|449677067|ref|XP_002163749.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like,
partial [Hydra magnipapillata]
Length = 165
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP-----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
TE+ + NYF KFG V+ V + + R F FV FV E+ ++L + PH + G++
Sbjct: 46 TEESLRNYFEKFGEVESVNLKRNKEDLNKHRGFAFVKFVTQESADEVLNQAEPHILDGSK 105
Query: 417 V 417
+
Sbjct: 106 I 106
>gi|414878425|tpg|DAA55556.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 430
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 406 KGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHP 440
+GNPHFVC RVLVKPY+EK ++ R K+QH
Sbjct: 361 QGNPHFVCDVRVLVKPYKEKGKVPGR--FRKLQHA 393
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ YFSKFG V DV I + R FGFVTF + ++ +L K PH V G ++
Sbjct: 46 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDP 104
Query: 420 KPYREK 425
KP + +
Sbjct: 105 KPAKAR 110
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ YFSKFG V DV I + R FGFVTF + ++ +L K PH V G ++
Sbjct: 46 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDP 104
Query: 420 KPYREK 425
KP + +
Sbjct: 105 KPAKAR 110
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 336 GEKSDPGGIVA--GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMF 389
G++ DP A G ++I++ ES E D+ YF KFGPV++V +P Q+R F
Sbjct: 99 GKQIDPKPAKARPGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQF 157
Query: 390 GFVTFVFAETV 400
FVTF ++V
Sbjct: 158 AFVTFEREDSV 168
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V Q+
Sbjct: 105 TRKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LLK-TFHELNGKMVEVK 179
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V Q+
Sbjct: 88 TRKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQV 146
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 147 LLK-TFHELNGKMVEVK 162
>gi|145347002|ref|XP_001417969.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578197|gb|ABO96262.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 358 ESTFTEQDVSNYFSKFGPVQDV---RIP-CQQKRMFGFVTFVFAETVKQILAKGNPHFVC 413
+ T E V N+FS+FGPV +V R P Q R FGF+TF ++ KQ+L + H +
Sbjct: 21 DRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSAKQVL-QNRYHDML 79
Query: 414 GARVLVK 420
G RV VK
Sbjct: 80 GKRVEVK 86
>gi|428181280|gb|EKX50144.1| hypothetical protein GUITHDRAFT_67277, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 45.1 bits (105), Expect = 0.095, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQIL 404
ST T QD+ YF K+G V+DV++ + R F FVTF AETV+ ++
Sbjct: 102 STVTTQDLYEYFGKYGEVEDVQVMVDPQTHRSRGFAFVTFKHAETVQDVM 151
>gi|413948586|gb|AFW81235.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 265
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Query: 406 KGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQH 439
+GNPHFVC RVLVKPY+EK ++ R K+QH
Sbjct: 196 QGNPHFVCDVRVLVKPYKEKGKVPGR--FRKLQH 227
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D NYF +FG + DV + Q+ R FGF+TF E V ++
Sbjct: 106 TKKIFVGGLA-STVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKV 164
Query: 404 LAKGNPHFVCGARVLVK 420
L + H + G V VK
Sbjct: 165 LMR-TFHELNGKMVEVK 180
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D NYF +FG + DV + Q+ R FGF+T+ E V+++L K H + G
Sbjct: 156 STVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHK-TFHELNG 214
Query: 415 ARVLVK 420
V VK
Sbjct: 215 KMVEVK 220
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T TE + N+FSKFG V + I ++ R FGF+ F + V +LA+GN + G
Sbjct: 112 TTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRTDMMG 171
Query: 415 ARVLVK 420
+V +K
Sbjct: 172 TQVEIK 177
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKY 331
Y+ KYGK ++ + +S G+ + + DRPH +S + DV +
Sbjct: 32 YFSKYGK-IEDCVVIKDSSTGRSKGFGFVTFETEAEADACMDDRPHTLNSRQI--DVKRA 88
Query: 332 LEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----R 387
+ S E+S G ++I++ + E ++ YF +FG ++ +P ++ R
Sbjct: 89 V--SREESVKPGAHFQVKKIFIGGLKDGC-DETNLKEYFGQFGTIETFELPLERDSEKPR 145
Query: 388 MFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKY-VEKMQH 439
F F+TF +TV +++AK H+V G R VK K+ + K VE +H
Sbjct: 146 GFAFITFEDHDTVDKLVAK-RHHYVNGVRCEVKKALSKAEMEKAKTQVESKRH 197
>gi|313231361|emb|CBY08476.1| unnamed protein product [Oikopleura dioica]
Length = 404
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 345 VAGSRQIYLTFPAESTFTEQDVSNYFSKFGPV---QDVRIPCQQKRMFGFVTFVFAETVK 401
VA S ++++ A T + + +YFSK+G V Q ++ + + +GFVTF ++
Sbjct: 57 VASSNKLFVGGLAHLNHTNEMLEDYFSKWGKVLSFQIIKDAGHRSKGYGFVTFAHVDSAS 116
Query: 402 QILAKGNPHFVCGARVLVKPYREKSR 427
L HF+ G V VK +EK R
Sbjct: 117 ACLNSAQ-HFIEGRSVSVKNCKEKER 141
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++FSK+G V++ +I + R FGF+ F E V +IL++GN + G
Sbjct: 116 STVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAG 175
Query: 415 ARVLVK 420
+V +K
Sbjct: 176 TQVEIK 181
>gi|156361860|ref|XP_001625502.1| predicted protein [Nematostella vectensis]
gi|156212338|gb|EDO33402.1| predicted protein [Nematostella vectensis]
Length = 126
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 344 IVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAET 399
+V R+I++ A ST T++ + YF FG V D + ++ R FGFVTF T
Sbjct: 9 VVVFFRKIFVGGLATST-TKEGLHQYFENFGEVTDCVLMTDPTTKRSRGFGFVTFRDPAT 67
Query: 400 VKQILAKGNPHFVCGARVLVKPYR 423
++ +LAK PH + G + KP R
Sbjct: 68 IESVLAK-KPHILDGKTIDPKPAR 90
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 345 VAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETV 400
V+ +R+I++ S+ TE ++ +YFS +G + + +I + R FGFVTFV + V
Sbjct: 284 VSKTRKIFVG-GIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAV 342
Query: 401 KQILAKGNPHFVCGARVLVK 420
+++ ++G H + G V +K
Sbjct: 343 ERLFSEGKTHELGGKLVEIK 362
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 338 KSDPGGIVAGSRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFV 392
+ + GG++ S+++++ P + TEQD YF +FG + D + Q+ R FGFV
Sbjct: 197 RGNSGGVITESKKVFVGGLPP--SVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFV 254
Query: 393 TFVFAETVKQILAKGNPHFVCGARVLVK 420
TF V ++++K H + G V +K
Sbjct: 255 TFEEEGAVAEVISK--THELHGKVVEIK 280
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 345 VAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETV 400
V+ +R+I++ S+ TE ++ +YFS +G + + +I + R FGFVTFV + V
Sbjct: 136 VSKTRKIFVG-GIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAV 194
Query: 401 KQILAKGNPHFVCGARVLVK 420
+++ ++G H + G V +K
Sbjct: 195 ERLFSEGKTHELGGKLVEIK 214
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T TE++ ++F+++G V+D +I + R FGFVTF + V +L++GN + G
Sbjct: 2125 ATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAG 2184
Query: 415 ARVLVK 420
A+V +K
Sbjct: 2185 AQVEIK 2190
>gi|198433300|ref|XP_002128655.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A/B
[Ciona intestinalis]
Length = 367
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 369 YFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
YFSKFG V+D I ++ R FGFV F AETVK++L N H++ G ++ K +
Sbjct: 135 YFSKFGVVKDCTIKKDSKTERSRGFGFVLFDDAETVKKVLESEN-HYLDGRKIDPKKAQA 193
Query: 425 KSR 427
+ R
Sbjct: 194 QRR 196
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++FSK+G V++ +I + R FGF+ F E V +IL++GN + G
Sbjct: 116 STVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAG 175
Query: 415 ARVLVK 420
+V +K
Sbjct: 176 TQVEIK 181
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQI 403
SR+I++ + T T +D+ +YFSKFG V D + Q R FGFVTFV + V ++
Sbjct: 62 SRKIFVGGLSWET-TVKDMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDSTCVNRV 120
Query: 404 LAKGNPHFVCGARVLVKPYREKSR 427
+ + H + G + P R K+R
Sbjct: 121 IEQ-TQHTLHGKN--IDPKRAKAR 141
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T TE + N+FSKFG V + I ++ R FGF+ F + V +LA+GN + G
Sbjct: 112 TTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRIDMMG 171
Query: 415 ARVLVK 420
+V +K
Sbjct: 172 TQVEIK 177
>gi|357616936|gb|EHJ70495.1| hypothetical protein KGM_10405 [Danaus plexippus]
Length = 441
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
T D+ +YFS+FG V DV +P + R FGFVTF+ E + + G H + GA V V
Sbjct: 215 MTADDLRDYFSRFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GEDHVIKGASVSV 270
>gi|357482897|ref|XP_003611735.1| RNA-binding protein [Medicago truncatula]
gi|355513070|gb|AES94693.1| RNA-binding protein [Medicago truncatula]
Length = 403
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQ 402
S++I++ P E+ +D+ YF +FG ++DV IP KR FGFVTF +
Sbjct: 230 SKKIFVGRLPPEAN--SEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADR 287
Query: 403 ILAKGNPHFVCGARVLV 419
+ + PH +CG V +
Sbjct: 288 VSLR--PHEICGHEVAI 302
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 105 TRKIFVGGLA-STVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LLK-TFHELNGKMVEVK 179
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 105 TRKIFVGGLA-STVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LLK-TFHELNGKMVEVK 179
>gi|183178950|gb|ACC43958.1| TAR-protein [Philodina roseola]
Length = 288
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+R+I++ ++ T D+ YFSK+G ++DV IP + R F FVTF + V+Q+
Sbjct: 190 ARKIFVARLPDN-ITPDDLRQYFSKYGAIKDVYIP-KPARSFAFVTFHDSNIVRQLFGT- 246
Query: 408 NPHFVCGARVLVKPYREKSR 427
H + G V V P K++
Sbjct: 247 --HIIHGCSVTVGPAEPKNK 264
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 359 STFTE-QDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVC 413
ST TE +D+ NYF K+G +++V I + +KR FGFVTF ++V +++ + + H +
Sbjct: 121 STETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQRH-HMIK 179
Query: 414 GARVLVK 420
G R VK
Sbjct: 180 GKRTEVK 186
>gi|388511899|gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T +D+ YF +FG + DV IP K R FGFVTF + V +A+ PH +CG +V
Sbjct: 96 TTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFA-EDGVADRVAR-RPHEICGHQV 153
Query: 418 LV 419
+
Sbjct: 154 AI 155
>gi|340056255|emb|CCC50585.1| predicted zinc finger protein [Trypanosoma vivax Y486]
Length = 1002
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 137 EDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRR------SPSLPE- 189
+D N+ F+ ++Q + + + + P HVR R + PE
Sbjct: 917 QDLSQSNRESFVDEQEQGEELEAEDGR------APRKGTRHVRARGRGGHHVYARGHPEG 970
Query: 190 FPVKVCHYFNKGFCKHGNNCRYFH 213
FP +C +FNKG CKHG NC++ H
Sbjct: 971 FPGGLCRFFNKGHCKHGGNCQFVH 994
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D NYF +FG + D + Q+ R FGF+T+ E V ++
Sbjct: 106 TRKIFVGGLA-STVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKV 164
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 165 LTK-TFHELNGKMVEVK 180
>gi|215712318|dbj|BAG94445.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 382
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
TE D ++F K+GPV D +I ++ R FGF+ F + V +LA GN + GA
Sbjct: 67 ALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGA 126
Query: 416 RVL 418
+++
Sbjct: 127 KLI 129
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
TE D ++F K+GPV D +I ++ R FGF+ F + V +LA GN + GA
Sbjct: 121 ALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGA 180
Query: 416 RVL 418
+++
Sbjct: 181 KLI 183
>gi|390364931|ref|XP_787866.3| PREDICTED: uncharacterized protein LOC582835 [Strongylocentrotus
purpuratus]
Length = 667
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAK 406
T +D+ YF+ +G V DV IP +KR+FGFVTF ++TV ++++K
Sbjct: 587 TAEDLKAYFTNYGVVTDVSIPPSTEGKKRVFGFVTFEDSDTVDKLISK 634
>gi|221055866|ref|XP_002259071.1| nucleic acid binding factor [Plasmodium knowlesi strain H]
gi|193809142|emb|CAQ39844.1| nucleic acid binding factor, putative [Plasmodium knowlesi strain
H]
Length = 760
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 341 PGGIVAGSR--QIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP---CQQK-RMFGFVTF 394
PGG R ++++T S T + + NYF FG + D+ +P C + R FVTF
Sbjct: 660 PGGDEWNKRGYKLFVT-KLNSVTTIETLRNYFEAFGEIIDIYMPNDVCTNRPRGIAFVTF 718
Query: 395 VFAETVKQILA-KGNPHFVCGARVLV 419
+ + VK+IL+ K + H + G V+V
Sbjct: 719 LDNDCVKKILSNKNSKHIIDGKEVVV 744
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++F+++G V+D +I + R FGF+T+ E V +L+ GN G
Sbjct: 143 STVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAG 202
Query: 415 ARVLVK 420
A+V +K
Sbjct: 203 AQVEIK 208
>gi|403222919|dbj|BAM41050.1| DAZ-associated protein 1 [Theileria orientalis strain Shintoku]
Length = 395
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ-----KRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
T+ D+ YF KFG V D P Q + FGF++F ET++++ + +PH + G
Sbjct: 126 TKDDLEEYFKKFGTVYDAYCPKQSNYSTLNKGFGFISFDSEETIQKVF-ETSPHVIMGRE 184
Query: 417 VLV 419
V+V
Sbjct: 185 VIV 187
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T Q + +YFS+FG V DV IP Q+ + FGF+TF ++ +L H + G +
Sbjct: 324 TVQTLRSYFSQFGDVVDVYIPRDAQTQKSKGFGFLTFANKNSIHTVLDPSLKHVLEGRDI 383
Query: 418 LV 419
+V
Sbjct: 384 IV 385
>gi|195999482|ref|XP_002109609.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
gi|190587733|gb|EDV27775.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
Length = 154
Score = 43.9 bits (102), Expect = 0.23, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T++ + NYF+K+G + D + C+ + R FGFVT+ +VK LA G PH + G V
Sbjct: 13 TDETLRNYFAKYGDIADSVVICESGSRKPRGFGFVTYKDVTSVKNCLA-GIPHQIDGKTV 71
Query: 418 LVK 420
VK
Sbjct: 72 EVK 74
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++F+++G V+D +I + R FGF+T+ E V +L+ GN G
Sbjct: 141 STVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAG 200
Query: 415 ARVLVK 420
A+V +K
Sbjct: 201 AQVEIK 206
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE++ NYF +FG + DV + Q+ R FGF+TF + V ++L K H + G
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHK-TFHELNG 177
Query: 415 ARVLVKPYREKSRLVDRKY--VEKMQHPMFCSLHFTDGDTEL 454
V VK R V ++ V ++ P+ +++ G +
Sbjct: 178 KLVEVK------RAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
>gi|154311851|ref|XP_001555254.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 715
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 191 PVKVCHYF-NKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEA 249
PV+VC +F ++ CK+ NNC+YFH H + AN+++N+ S +
Sbjct: 256 PVEVCKFFLDRKGCKYKNNCQYFHDHDTRAKLRE--RRMANNVKNKLEPVSTNQETTYKR 313
Query: 250 EITELLKQRRGFPISIA 266
E+ L P+S+A
Sbjct: 314 EVLALKSNNSNVPVSVA 330
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 105 TRKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LLK-TFHELNGKMVEVK 179
>gi|156098334|ref|XP_001615199.1| nucleic acid binding factor [Plasmodium vivax Sal-1]
gi|148804073|gb|EDL45472.1| nucleic acid binding factor, putative [Plasmodium vivax]
Length = 753
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 341 PGGIVAGSR--QIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP---CQQK-RMFGFVTF 394
PGG R ++++T S T + + NYF FG + D+ +P C + R FVTF
Sbjct: 653 PGGDEWNKRGYKLFVT-KLNSVTTIETLRNYFEAFGEIIDIYMPNDVCTNRPRGIAFVTF 711
Query: 395 VFAETVKQILA-KGNPHFVCGARVLV 419
+ + VK+IL+ K + H + G V+V
Sbjct: 712 LDNDCVKKILSNKNSKHIIDGKEVVV 737
>gi|224285299|gb|ACN40374.1| unknown [Picea sitchensis]
Length = 520
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 348 SRQIYLTFPAE--STFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVK 401
SR+I F A T T++ +YF K+G + D +P +Q R GFVT+ AE+V
Sbjct: 90 SRKITRIFVARISPTVTDEMFRSYFEKYGSILDAYMPKDQTTKQHRGIGFVTYENAESVD 149
Query: 402 QILAKGNPHFVCGARVLV---KPYREKSRLVDRKY 433
+++++ H + G+ + V P E R+ +R +
Sbjct: 150 EVMSE--SHELAGSTIAVDRATPKEETGRVWERNF 182
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + N+FSK+G V + +I + R FGF+ F E V ++++KGN + G
Sbjct: 116 STVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAG 175
Query: 415 ARVLVK 420
+V +K
Sbjct: 176 TQVEIK 181
>gi|347839807|emb|CCD54379.1| hypothetical protein [Botryotinia fuckeliana]
Length = 747
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 191 PVKVCHYF-NKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEA 249
PV+VC +F ++ CK+ NNC+YFH H + AN+++N+ S +
Sbjct: 256 PVEVCKFFLDRKGCKYKNNCQYFHDHDTRAKLRE--RRMANNVKNKLEPVSTNQETTYKR 313
Query: 250 EITELLKQRRGFPISIA 266
E+ L P+S+A
Sbjct: 314 EVLALKSNNSNVPVSVA 330
>gi|147795790|emb|CAN67607.1| hypothetical protein VITISV_004303 [Vitis vinifera]
Length = 507
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
S++I++ S TE++ NYF +FG + DV + ++ R FGF+TF E+V+ +
Sbjct: 99 SKKIFVG-GLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHV 157
Query: 404 LAKGNPHFVCGARVLVK 420
+ + N + + G RV VK
Sbjct: 158 M-QNNFYELNGKRVEVK 173
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQILAKGNPHFVCGA 415
TE + +YFSK+G V + I R FGFVTF A ++ + L HF+ G
Sbjct: 15 AITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQDQQQHFIQGQ 74
Query: 416 RVLVK 420
RV VK
Sbjct: 75 RVEVK 79
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE++ NYF +FG + DV + Q+ R FGF+TF + V ++L K H + G
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHK-TFHELNG 177
Query: 415 ARVLVKPYREKSRLVDRKY--VEKMQHPMFCSLHFTDGDTEL 454
V VK R V ++ V ++ P+ +++ G +
Sbjct: 178 KLVEVK------RAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
>gi|225458908|ref|XP_002283509.1| PREDICTED: uncharacterized protein LOC100255821 [Vitis vinifera]
Length = 471
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
S++I++ S TE++ NYF +FG + DV + ++ R FGF+TF E+V+ +
Sbjct: 99 SKKIFVG-GLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHV 157
Query: 404 LAKGNPHFVCGARVLVK 420
+ + N + + G RV VK
Sbjct: 158 M-QNNFYELNGKRVEVK 173
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQILAKGNPHFVCGA 415
TE + +YFSK+G V + I R FGFVTF A ++ + L HF+ G
Sbjct: 15 AITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQDQQQHFIQGQ 74
Query: 416 RVLVK 420
RV VK
Sbjct: 75 RVEVK 79
>gi|389583621|dbj|GAB66355.1| nucleic acid binding factor [Plasmodium cynomolgi strain B]
Length = 667
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 341 PGGIVAGSR--QIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP---CQQK-RMFGFVTF 394
PGG R ++++T S T + + NYF FG + D+ +P C + R FVTF
Sbjct: 567 PGGDEWNKRGYKLFVT-KLNSVTTIETLRNYFEAFGEIIDIYMPNDVCTNRPRGIAFVTF 625
Query: 395 VFAETVKQILA-KGNPHFVCGARVLV 419
+ + VK+IL+ K + H + G V+V
Sbjct: 626 LDNDCVKKILSNKNSKHIIDGKEVVV 651
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + N+FSK+G V + +I + R FGF+ F E V ++++KGN + G
Sbjct: 116 STVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAG 175
Query: 415 ARVLVK 420
+V +K
Sbjct: 176 TQVEIK 181
>gi|405965286|gb|EKC30669.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 380
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 330 KYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMF 389
++LEY ++ G SR++++ E T D+ +YFSK+G V DV IP + R F
Sbjct: 154 RFLEYDSQE---GAAEMVSRKVFVARCTED-ITADDLKSYFSKYGEVSDVFIP-KPFRAF 208
Query: 390 GFVTFVFAETVKQILAKGNPHFVCGARVLV 419
FVTF + + G H + GA V V
Sbjct: 209 AFVTFADHRIARSLC--GEDHIIKGASVHV 236
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 105 TRKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LLK-TFHELNGKMVEVK 179
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + NYF +FG + DV + Q+ R FGF+TF E+V +L K H + G
Sbjct: 131 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK-TFHELNG 189
Query: 415 ARVLVK 420
V VK
Sbjct: 190 KMVEVK 195
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + NYF +FG + DV + Q+ R FGF+TF E+V +L K H + G
Sbjct: 128 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK-TFHELNG 186
Query: 415 ARVLVK 420
V VK
Sbjct: 187 KMVEVK 192
>gi|384254104|gb|EIE27578.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 412
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ-----QKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
TE DV YF++FG V DV +P + R FGFVTF V +I A G H + G+
Sbjct: 299 TENDVKEYFTRFGYVMDVYLPRDKVNRSEHRGFGFVTFETDGAVLRIHAHGQ-HQIKGSV 357
Query: 417 VLVK---PYREKSRLVD 430
V + P RE+ D
Sbjct: 358 VAIDSAVPRREEGTRTD 374
>gi|217074298|gb|ACJ85509.1| unknown [Medicago truncatula]
gi|388503058|gb|AFK39595.1| unknown [Medicago truncatula]
Length = 397
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQ 402
S++I++ P E+ +D+ YF +FG ++DV IP KR FGFVTF +
Sbjct: 224 SKKIFVGRLPPEAN--SEDLRQYFGRFGRIEDVCIPRDPKRTGHRGFGFVTFADEGVADR 281
Query: 403 ILAKGNPHFVCGARVLV 419
+ + PH +CG V +
Sbjct: 282 VSLR--PHEICGHEVAI 296
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + NYF +FG + DV + Q+ R FGF+TF E+V +L K H + G
Sbjct: 131 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK-TFHELNG 189
Query: 415 ARVLVK 420
V VK
Sbjct: 190 KMVEVK 195
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 43.5 bits (101), Expect = 0.31, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE ++ YFS +G + D +I K R FGFVTF + V+QI ++G H + G
Sbjct: 99 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGRTHELGGK 158
Query: 416 RV 417
+V
Sbjct: 159 QV 160
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE++ NYF +FG + DV + Q+ R FGF+TF + V ++L K H + G
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHK-TFHELNG 177
Query: 415 ARVLVKPYREKSRLVDRKY--VEKMQHPMFCSLHFTDGDTEL 454
V VK R V ++ V ++ P+ +++ G +
Sbjct: 178 KLVEVK------RAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V+++
Sbjct: 105 TKKIFVGGLA-STVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LHK-TFHELNGKMVEVK 179
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
++ TE + +YFSKFG V + +I + R FGFVTF E V++IL+ G + G
Sbjct: 148 TSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGG 207
Query: 415 ARVLVKPYREKSRL 428
+V +K K L
Sbjct: 208 KQVEIKKAEPKKAL 221
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S TE + ++F+++G V+D +I + R FGF+TF E V +L+ GN G
Sbjct: 139 SNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNKIDFAG 198
Query: 415 ARVLVK 420
A+V +K
Sbjct: 199 AQVEIK 204
>gi|432909908|ref|XP_004078224.1| PREDICTED: leukocyte receptor cluster member 9-like [Oryzias
latipes]
Length = 565
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 192 VKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNE 235
VKVC +F G C+ G+ CR FH P P S SP +D +NE
Sbjct: 54 VKVCQFFQSGKCRFGHKCRSFHSEP-PLHVSAPMSPEIDDKQNE 96
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE + ++F+++G V D +I ++ R FGF+ F + V +LA GN + G
Sbjct: 124 STLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAG 183
Query: 415 ARVLVK 420
++V +K
Sbjct: 184 SKVEIK 189
>gi|357113956|ref|XP_003558767.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 345
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQK 386
Y Y DP + G + T++D+ +YF KFG + DV + C +
Sbjct: 119 YAGYGSRSCDPNKVFIGGLR--------GNITKEDLKSYFGKFGAINDVVVICDGLTHKS 170
Query: 387 RMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
R FGF+TF +++ ++L + + H + G +V K
Sbjct: 171 RGFGFITFDSEDSMLKVL-ENSYHDLNGTKVETK 203
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V+++
Sbjct: 105 TKKIFVGGLA-STVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LHK-TFHELNGKMVEVK 179
>gi|388505314|gb|AFK40723.1| unknown [Medicago truncatula]
Length = 165
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQ 402
S++I++ P E+T +D+ YF +FG + DV IP K R FGFVTF + +
Sbjct: 19 SKKIFVGRLPPEAT--TEDLRLYFGRFGHILDVYIPRDVKRPGHRGFGFVTFADSGVADR 76
Query: 403 ILAKGNPHFVCGARVLV 419
+ + PH +CG V +
Sbjct: 77 VSRR--PHEICGQEVAI 91
>gi|399218473|emb|CCF75360.1| unnamed protein product [Babesia microti strain RI]
Length = 518
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 340 DPGGIVAGSR-QIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM-----FGFV 392
D G V R +I++T P E+T D+ NYF +FG V+D P Q + FGF+
Sbjct: 112 DSGDRVNRDRYRIFVTRIPFEAT--SDDIENYFKQFGEVEDAYCPKQPGKAHLNKGFGFI 169
Query: 393 TFVFAETVKQILAKGNPHFVCGARVLVKPYREKS-RLVDRKYVE 435
+F E V Q + PH + G ++V +S + DRK V+
Sbjct: 170 SFKNDE-VLQAVFNARPHTILGREIVVDKATIRSEQQTDRKRVD 212
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 366 VSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 421
+ NYF +FG + D IP Q+ + FGF++F +V+ +L H + G V +
Sbjct: 442 MRNYFERFGELIDAYIPKDPKTQKGKGFGFISFHNETSVRAVLQATYKHVIDGREVRLVV 501
Query: 422 YREKSRLVDRKYVEKM 437
YR L+++ Y K+
Sbjct: 502 YRFFQLLLNKYYFLKL 517
>gi|302142161|emb|CBI19364.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
S++I++ S TE++ NYF +FG + DV + ++ R FGF+TF E+V+ +
Sbjct: 99 SKKIFVG-GLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHV 157
Query: 404 LAKGNPHFVCGARVLVK 420
+ + N + + G RV VK
Sbjct: 158 M-QNNFYELNGKRVEVK 173
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQILAKGNPHFVCG 414
TE + +YFSK+G V + I R FGFVTF A ++ + L HF+ G
Sbjct: 14 GAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQDQQQHFIQG 73
Query: 415 ARVLVK 420
RV VK
Sbjct: 74 QRVEVK 79
>gi|358349448|ref|XP_003638749.1| RNA-binding protein [Medicago truncatula]
gi|355504684|gb|AES85887.1| RNA-binding protein [Medicago truncatula]
Length = 371
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQ 402
S++I++ P E+T +D+ YF +FG + DV IP K R FGFVTF + +
Sbjct: 225 SKKIFVGRLPPEAT--TEDLRLYFGRFGHILDVYIPRDVKRPGHRGFGFVTFADSGVADR 282
Query: 403 ILAKGNPHFVCGARVLV 419
+ + PH +CG V +
Sbjct: 283 VSRR--PHEICGQEVAI 297
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E+V+++
Sbjct: 103 TKKIFVGGLA-STVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKV 161
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 162 LYK-TFHELNGKMVEVK 177
>gi|209154614|gb|ACI33539.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 359
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF FG ++ + +P +++R F F+TF TVK+ L K H VCG +V
Sbjct: 169 TEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEESTVKKCLEK-KFHNVCGTKV 227
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T TE + +YFSKFG V + +I + R FGF+TF + V++I+++G + G
Sbjct: 142 TTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGG 201
Query: 415 ARVLVK 420
+V +K
Sbjct: 202 KQVEIK 207
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + NYF +FG + DV + Q+ R FGF+TF E+V +L K H + G
Sbjct: 124 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK-TFHELNG 182
Query: 415 ARVLVK 420
V VK
Sbjct: 183 KMVEVK 188
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + NYF +FG + DV + Q+ R FGF+TF E+V +L K H + G
Sbjct: 128 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK-TFHELNG 186
Query: 415 ARVLVK 420
+ VK
Sbjct: 187 KMIEVK 192
>gi|350295431|gb|EGZ76408.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 601
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 362 TEQDVSNYFSKFGPVQDV---RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
TE+ + F KFG V DV R P + +GFVTF E +++ ++ + F G R+
Sbjct: 362 TEEHLKGAFEKFGNVTDVFLARDPRGLSKGYGFVTFATREALEEACSQVDGSFWHGRRIS 421
Query: 419 VKPYREKSRLVDRKYVEKMQHPMFC----SLHFTDGDTELHTM 457
V+P R K V+R + P C ++ + D EL+++
Sbjct: 422 VEPRRAK---VNRGSA--VGEPSACLFIGNIPYETTDAELNSI 459
>gi|328723854|ref|XP_001948745.2| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Acyrthosiphon
pisum]
Length = 377
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y+ ++G+ L + + ++G++ GY + L++ +R++ + H VPK
Sbjct: 111 YFGQFGELLMLQ---IKRDKNGQSRGYGFLRY-TNLESQVRVLSQRHKIDGRNCEVKVPK 166
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
E G S+ G V R T D+ YFSKFG V +V +P R F
Sbjct: 167 SKE--GNGSELSGKVFVGR-------VTEDLTADDIREYFSKFGEVINVFVPKNPFRGFA 217
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLV-----KPYREKSR 427
FVTF+ E + G H V V V KP K+R
Sbjct: 218 FVTFLDPEVAASLC--GEDHIVKDVSVRVSEAAPKPQAPKNR 257
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE++ NYF +FG + DV + Q+ R FGF+TF + V ++L K H + G
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHK-TFHELNG 177
Query: 415 ARVLVKPYREKSRLVDRKY--VEKMQHPMFCSLHFTDGDTEL 454
V VK R V ++ V ++ P+ +++ G +
Sbjct: 178 KLVEVK------RAVPKEISPVSNIRSPLASGVNYGGGSNRM 213
>gi|2582639|emb|CAA05398.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 452
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + NYF +FG + DV + Q+ R FGF+TF E+V +L K H + G
Sbjct: 58 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK-TFHELNG 116
Query: 415 ARVLVK 420
V VK
Sbjct: 117 KMVEVK 122
>gi|85117951|ref|XP_965346.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
gi|28927154|gb|EAA36110.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
Length = 606
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 362 TEQDVSNYFSKFGPVQDV---RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
TE+ + F KFG V DV R P + +GFVTF E +++ ++ + F G R+
Sbjct: 362 TEEHLKGAFEKFGNVTDVFLARDPRGLSKGYGFVTFATREALEEACSQVDGSFWHGRRIS 421
Query: 419 VKPYREK 425
V+P R K
Sbjct: 422 VEPRRAK 428
>gi|147804734|emb|CAN67089.1| hypothetical protein VITISV_033546 [Vitis vinifera]
Length = 145
Score = 42.7 bits (99), Expect = 0.46, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 345 VAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETV 400
V+ +R+I++ S+ TE ++ +YFS +G + + +I + R FGFVTFV + V
Sbjct: 54 VSKTRKIFVG-GIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAV 112
Query: 401 KQILAKGNPHFVCGARVLVK 420
+++ ++G H + G V ++
Sbjct: 113 ERLFSEGKTHELGGKLVTLR 132
>gi|156089167|ref|XP_001611990.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154799244|gb|EDO08422.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 362
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
+ +EQ + +F +FG V+ V I Q R FGFV F V+++L + HFV G++
Sbjct: 175 SLSEQMLKTFFERFGAVEKVTIMRQYDGSSRGFGFVIFAVDGAVEKVL-ESPSHFVYGSK 233
Query: 417 VLVKPYREKSR----LVDRKYVEKMQH 439
V V+ +S+ ++ +Y M+H
Sbjct: 234 VDVRAAESRSKQAAARLENQYKNMMRH 260
>gi|401401107|ref|XP_003880933.1| hypothetical protein NCLIV_039750 [Neospora caninum Liverpool]
gi|325115345|emb|CBZ50900.1| hypothetical protein NCLIV_039750 [Neospora caninum Liverpool]
Length = 502
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 343 GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAE 398
G V+ R+I++ + +E DV YF+KFG V V I + R FGFV F +
Sbjct: 195 GNVSLKRKIFVGG-VNPSLSESDVEKYFAKFGTVDKVSIIRDATTGKSRGFGFVVFASED 253
Query: 399 TVKQIL 404
+VK++L
Sbjct: 254 SVKEVL 259
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++L K H + G
Sbjct: 115 STITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYK-TFHELNG 173
Query: 415 ARVLVK 420
V VK
Sbjct: 174 KMVEVK 179
>gi|328723850|ref|XP_003247957.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Acyrthosiphon
pisum]
gi|328723852|ref|XP_003247958.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Acyrthosiphon
pisum]
Length = 392
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y+ ++G+ L + + ++G++ GY + L++ +R++ + H VPK
Sbjct: 126 YFGQFGELLMLQ---IKRDKNGQSRGYGFLRY-TNLESQVRVLSQRHKIDGRNCEVKVPK 181
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
E G S+ G V R T D+ YFSKFG V +V +P R F
Sbjct: 182 SKE--GNGSELSGKVFVGR-------VTEDLTADDIREYFSKFGEVINVFVPKNPFRGFA 232
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLV-----KPYREKSR 427
FVTF+ E + G H V V V KP K+R
Sbjct: 233 FVTFLDPEVAASLC--GEDHIVKDVSVRVSEAAPKPQAPKNR 272
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 345 VAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETV 400
+A + +I++ A +T TE DV N FSKFGP+ +V +P ++ + FG VTFV E
Sbjct: 325 IAETGKIFVRNLAYTT-TEDDVENLFSKFGPLAEVNLPVDPTSKKIKGFGTVTFVMPEHA 383
Query: 401 KQILAKGNPHFVCGARVLVKPYREK 425
+ + + + G V + P + K
Sbjct: 384 ARAYGELDGSILHGRMVHLLPGKSK 408
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF FG ++ + +P +++R F F+TF TVK+ L K H VCG +V
Sbjct: 178 TEETIREYFGTFGEIESIELPVDLKFKKRRGFIFITFKEEATVKKCLEK-KFHNVCGTKV 236
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++L K H + G
Sbjct: 115 STITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYK-TFHELNG 173
Query: 415 ARVLVK 420
V VK
Sbjct: 174 KMVEVK 179
>gi|346469143|gb|AEO34416.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ---KRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T++ + NYFS+FG V D + C + R FGFVTF V +LA G PH + G V
Sbjct: 21 TQESLLNYFSRFGEVVDCVVMCNETGRSRGFGFVTFRDPSCVATVLA-GGPHQLDGRTV 78
>gi|336465131|gb|EGO53371.1| hypothetical protein NEUTE1DRAFT_52411 [Neurospora tetrasperma FGSC
2508]
Length = 597
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 362 TEQDVSNYFSKFGPVQDV---RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
TE+ + F KFG V DV R P + +GFVTF E +++ ++ + F G R+
Sbjct: 362 TEEHLKGAFEKFGNVTDVFLARDPRGLSKGYGFVTFATREALEEACSQVDGSFWHGRRIS 421
Query: 419 VKPYREK 425
V+P R K
Sbjct: 422 VEPRRAK 428
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 42.7 bits (99), Expect = 0.51, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 319 QHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQD 378
QHSV+ A + PGG + + S TE D YF +FG + D
Sbjct: 81 QHSVVKAN--------GSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTITD 132
Query: 379 VRI----PCQQKRMFGFVTFVFAETVKQILAK 406
V + Q+ R FGF+TF E V +L K
Sbjct: 133 VVVMYDHATQRPRGFGFITFDTEEAVDNVLHK 164
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ F K+GPV+DV +P + R FGFV + +AE + + N H + G R +
Sbjct: 66 EDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRMN-HKIIGGREIR 124
Query: 420 KPYREKSRLV 429
Y E++R
Sbjct: 125 IVYAEENRKT 134
>gi|156395208|ref|XP_001637003.1| predicted protein [Nematostella vectensis]
gi|156224112|gb|EDO44940.1| predicted protein [Nematostella vectensis]
Length = 291
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 349 RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGN 408
+++++ EST TE+ + YF++FG V DV IP + R FGFVTF E K++L++
Sbjct: 199 KKLFVGRLPEST-TEKTLMEYFAQFGEVTDVYIP-KPFRHFGFVTFASGELAKKVLSQN- 255
Query: 409 PHFVCGA 415
H + G+
Sbjct: 256 -HRISGS 261
>gi|405957161|gb|EKC23392.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 457
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+R++++ E T +D+ NYF KFG V DV IP + R F FVTF E + + G
Sbjct: 203 NRKVFVGRCTED-MTAEDLRNYFGKFGEVVDVFIP-KPFRAFAFVTFADPEVSQNLC--G 258
Query: 408 NPHFVCGARVLV 419
H + GA V +
Sbjct: 259 EDHIIKGASVHI 270
>gi|345490453|ref|XP_001602436.2| PREDICTED: TAR DNA-binding protein 43-like [Nasonia vitripennis]
Length = 476
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 24/206 (11%)
Query: 235 EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMM--------YYEKYGKTLQAEGYL 286
E+ S +LE A+ + + R + + LP Y+E +G+ L A+ +
Sbjct: 79 ENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFETFGEVLMAQ--V 136
Query: 287 TESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIV 345
+ + G++ G+ + ++ +R + + H VP S G I
Sbjct: 137 KKDAKSGQSKGFGFIRF-GSYESQLRCLAQRHMIDGRWCDVKVPN--------SKEGMIQ 187
Query: 346 AGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILA 405
++++ E T D+ +YFSKFG V DV IP + R F FVTF+ E + +
Sbjct: 188 QVPCKVFVGRCTED-LTADDLRDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC- 244
Query: 406 KGNPHFVCGARVLVKPYREKSRLVDR 431
G H + G V V KS +R
Sbjct: 245 -GEDHIIKGVSVHVSNAAPKSEGNNR 269
>gi|427797249|gb|JAA64076.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 521
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 224 IFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPM--------MYYEK 275
+F +A +E+ S LE A+ L +++ + + LP Y+E
Sbjct: 102 VFPKDACLHNSENKRKSDEQLENSTAKTKRLENRQKCSDLIVLGLPWKTSEQDLRQYFET 161
Query: 276 YGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVP--KYL 332
+G+ L A+ + + + G++ G+ + + ++ +R + + H +P K
Sbjct: 162 FGEVLMAQ--VKKDPKTGQSKGFGFIRF-SSYESQVRALSKRHLIDGRWCDVKIPNSKVS 218
Query: 333 EYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFV 392
G+ S+ SR++++ E + D+ +YFSK+G V DV IP + R F FV
Sbjct: 219 AQDGQASEL------SRKVFVGRCTED-LSSDDLRDYFSKYGEVTDVFIP-KPFRAFAFV 270
Query: 393 TFVFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
TFV + + + G H + G + V KS
Sbjct: 271 TFVDPDVAQSLC--GEDHIIRGTSIHVSNAVPKS 302
>gi|242023524|ref|XP_002432182.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212517579|gb|EEB19444.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
Length = 456
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y+E YG+ L A+ + + + G++ G+ + + R++ + H S VP
Sbjct: 125 YFETYGEVLMAQ--VKKDPKSGQSKGFGFVRF-GSYEAQARVLTQRHMIDSRWCDVKVPN 181
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
E G+V T +D+ YFSKFG V DV IP + R F
Sbjct: 182 SKE---------GMVQQVPCKVFVGRCTEDITAEDLREYFSKFGEVTDVFIP-KPFRAFA 231
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
FVTF+ E + + G H + G V V KS
Sbjct: 232 FVTFLDPEVAQSLC--GEDHIIKGTSVHVSNAAPKS 265
>gi|307199474|gb|EFN80087.1| TAR DNA-binding protein 43 [Harpegnathos saltator]
Length = 467
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Query: 235 EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMM--------YYEKYGKTLQAEGYL 286
E+ S +LE A+ + + R + + LP Y+E++G+ L A+ +
Sbjct: 80 ENKRKSDDNLENSTAKTKRMETKLRCTDLIVLGLPWKTTEQNLREYFEQFGEVLMAQ--V 137
Query: 287 TESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIV 345
+ + G++ G+ + ++ +R + + H VP E G I
Sbjct: 138 KKDAKSGQSKGFGFIRF-GSYESQLRCLAQRHMIDGRWCDVKVPNSKE--------GMIQ 188
Query: 346 AGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILA 405
++++ E T D+ +YFSKFG V DV IP + R F FVTF+ E + +
Sbjct: 189 QVPCKVFVGRCTED-LTADDLRDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC- 245
Query: 406 KGNPHFVCGARVLVKPYREKS 426
G H + G V V KS
Sbjct: 246 -GEDHIIKGVSVHVSNAAPKS 265
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF FG ++ + +P +++R F F+TF TVK+ L K H VCG +V
Sbjct: 178 TEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEEATVKKCLEK-KFHNVCGTKV 236
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 335 SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFG 390
+G+K DP A +I++ + +++D+ N+FS+FG + DV +P Q++ F
Sbjct: 120 NGKKVDPKKAKARHGKIFVG-GLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFC 178
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVK 420
F+TF + V ++L K + G V VK
Sbjct: 179 FITFESEQVVNELL-KTPKQTINGKEVDVK 207
>gi|348668207|gb|EGZ08031.1| hypothetical protein PHYSODRAFT_526739 [Phytophthora sojae]
Length = 158
Score = 42.7 bits (99), Expect = 0.56, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 18/92 (19%)
Query: 311 RLIDRPH--GQHSVILAEDVPKYLEYSGEKSDPGGIVAGSR--QIYLTFPAESTFTEQDV 366
R++D H SV + +P+ EK+ PGG GSR +I++ A T TEQD
Sbjct: 74 RVLDETHTLDGRSVEVKRAIPR------EKTAPGG---GSRLKKIFVGGLA-PTVTEQDF 123
Query: 367 SNYFSKFGPVQDVRI----PCQQKRMFGFVTF 394
+YF +FG + D + Q+ R FGF+TF
Sbjct: 124 RHYFEEFGKITDAVVMIDRDTQRSRGFGFITF 155
>gi|167517919|ref|XP_001743300.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778399|gb|EDQ92014.1| predicted protein [Monosiga brevicollis MX1]
Length = 77
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 364 QDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ FSKFGP++DV +P Q+ R FGFVTF + +A+ N G R+ V
Sbjct: 4 EDLREEFSKFGPIKDVYLPVDRESQRPRGFGFVTFEEQRSADDAIAQLNEQDFMGRRIQV 63
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
D+ + F +FGP++D+ +P + R FGFV + +AE + + + N H V G R +
Sbjct: 61 NDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMN-HKVIGGREIA 119
Query: 420 KPYREKSR 427
+ E++R
Sbjct: 120 IVFAEENR 127
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
D+ + F +FGP++D+ +P + R FGFV + +AE + + + N H V G R +
Sbjct: 61 NDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMN-HKVIGGREIA 119
Query: 420 KPYREKSR 427
+ E++R
Sbjct: 120 IVFAEENR 127
>gi|66358802|ref|XP_626579.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228014|gb|EAK88934.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
Length = 199
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T ++ + YF +FG + D + C +K R FGFVTF V +I+ + H++ G
Sbjct: 94 TTCSQDILRKYFEQFGQISDCVMMCDKKSGIGRGFGFVTFTSTSVVDEIIRAYDEHYIDG 153
Query: 415 ARVLVK 420
V VK
Sbjct: 154 QWVEVK 159
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 105 TKKIFVGGLA-STVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LHK-TFHELNGKMVEVK 179
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE++ NYF +FG + DV + Q+ R FGF+TF + V ++L K H + G
Sbjct: 120 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHK-TFHELNG 178
Query: 415 ARVLVKPYREKSRLVDRKY--VEKMQHPMFCSLHFTDGDTEL 454
V VK R V ++ V + P+ L++ G +
Sbjct: 179 KLVEVK------RAVPKETSPVSNNRSPLPGGLNYGGGSNRI 214
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ A ST TE D YF ++G + DV + Q+ R FGF+T+ E V ++
Sbjct: 106 TRKIFVGGLA-STVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKV 164
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 165 LMK-TFHELNGKMVEVK 180
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
D+ + F +FGP++D+ +P + R FGFV + +AE + + + N H V G R +
Sbjct: 61 NDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMN-HKVIGGREIA 119
Query: 420 KPYREKSR 427
+ E++R
Sbjct: 120 IVFAEENR 127
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 106 TKKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKV 164
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 165 LHK-TFHELNGKMVEVK 180
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF FG ++ + +P ++R F F+TF VK+IL K H VCG++
Sbjct: 141 TEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEK-KYHNVCGSKC 199
Query: 418 LVK 420
+K
Sbjct: 200 EIK 202
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++L K H + G
Sbjct: 149 STITESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYK-TFHELNG 207
Query: 415 ARVLVK 420
V VK
Sbjct: 208 KMVEVK 213
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ---KRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T++ + NYFS+FG V D + C + R FGFVTF V +LA G PH + G V
Sbjct: 22 TQESLLNYFSRFGEVVDSVVMCNETGRSRGFGFVTFRDPSCVATVLA-GGPHQLDGRTV 79
>gi|357124087|ref|XP_003563738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 2 [Brachypodium distachyon]
Length = 354
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQ 402
+R+I++ P ++ TE + +FS +G V++ +I + R FGFVTF + V++
Sbjct: 115 TRKIFVGGIP--TSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVER 172
Query: 403 ILAKGNPHFVCGARVLVK 420
++++G H + G +V +K
Sbjct: 173 VMSEGRMHDLGGKQVEIK 190
>gi|38566951|emb|CAE76253.1| related to heterogeneous nuclear ribonucleoprotein HRP1 [Neurospora
crassa]
Length = 344
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 362 TEQDVSNYFSKFGPVQDV---RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
TE+ + F KFG V DV R P + +GFVTF E +++ ++ + F G R+
Sbjct: 100 TEEHLKGAFEKFGNVTDVFLARDPRGLSKGYGFVTFATREALEEACSQVDGSFWHGRRIS 159
Query: 419 VKPYREK 425
V+P R K
Sbjct: 160 VEPRRAK 166
>gi|429329849|gb|AFZ81608.1| hypothetical protein BEWA_010220 [Babesia equi]
Length = 404
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 344 IVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETV 400
AG R+ E+ + YFSKFG ++ V I Q R FGF+ FV AE
Sbjct: 185 TAAGLRKKIFVGGLSKALNEEMLEEYFSKFGEIEKVTIMRQLDGTSRGFGFILFV-AENS 243
Query: 401 KQILAKGNPHFVCGARVLVKPYREKSRL 428
+ K HFV G +V V+ + +L
Sbjct: 244 AENALKSPSHFVYGNKVDVRAAETRPKL 271
>gi|170057997|ref|XP_001864728.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
gi|167877238|gb|EDS40621.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
Length = 540
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 350 QIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNP 409
+I+L E T D+ YFSK+G V DV IP + R F FVTF+ + + G
Sbjct: 210 KIFLGRVTED-MTADDIREYFSKYGEVTDVFIP-KPFRAFAFVTFIDPHVAQSLC--GED 265
Query: 410 HFVCGARVLV 419
H + GA V V
Sbjct: 266 HLIKGASVYV 275
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
D+ + F +FGP++D+ +P + R FGFV + +AE + + + N H V G R +
Sbjct: 61 NDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAMKRMN-HKVIGGREIA 119
Query: 420 KPYREKSR 427
+ E++R
Sbjct: 120 IVFAEENR 127
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V+++
Sbjct: 105 TKKIFVGGLA-STVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LHK-TFHELNGKMVEVK 179
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 335 SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFG 390
S + SD I G+ + F A+ EQD+ FS+FG + DV +P + R F
Sbjct: 518 SNDTSDYAKIFIGN----VDFNAD----EQDLETLFSQFGEISDVYLPKDRMTGKSRGFA 569
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVKPYR 423
V F E+ K+ L NP F+ ++ V+ Y+
Sbjct: 570 IVEFEQLESAKKALENTNPLFLRNRKLYVQKYK 602
>gi|224067168|ref|XP_002302389.1| predicted protein [Populus trichocarpa]
gi|222844115|gb|EEE81662.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 42.4 bits (98), Expect = 0.68, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE+ NYF +FG DV + + R FGFVTF E+V ++L G+ H + G
Sbjct: 102 SSLTEEQFKNYFEQFGRTVDVVVMQDSLTNRPRGFGFVTFDSEESVDKVLLIGS-HELNG 160
Query: 415 ARVLVK 420
RV VK
Sbjct: 161 KRVEVK 166
>gi|357603649|gb|EHJ63861.1| hypothetical protein KGM_07603 [Danaus plexippus]
Length = 411
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y+EK+G+ L A+ L + G + G++ + + + +R++ + H +P
Sbjct: 124 YFEKFGEVLMAQ--LKRDPKTGMSKGFAFIRF-SSYTSQMRVLAQRHMIDGRWCDVRIPN 180
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
S G + + ++++ E T D+ YFS+FG V DV IP + R F
Sbjct: 181 --------SKEGSVTSMPCKVFVGRCTED-LTANDLREYFSQFGEVTDVFIP-KPFRAFS 230
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLV---KPYREKS-----RLVDRKYVEKMQH 439
F+TF+ E + + G H + G V V P + KS L R Y E H
Sbjct: 231 FITFLDPEVAQSLC--GQDHIIKGVSVNVSNASPKQNKSGSNQRNLPSRNYEEGHPH 285
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 340 DPGGIVAGS------RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMF 389
+ GG + GS ++I++ A ST TE D YF +FG + DV + Q+ R F
Sbjct: 92 NSGGSIHGSPGPGRTKKIFVGGLA-STVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGF 150
Query: 390 GFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
GF+T+ E V ++L K H + G V VK
Sbjct: 151 GFITYDSEEAVDKVLMK-TFHELNGKMVEVK 180
>gi|260793328|ref|XP_002591664.1| hypothetical protein BRAFLDRAFT_223392 [Branchiostoma floridae]
gi|229276873|gb|EEN47675.1| hypothetical protein BRAFLDRAFT_223392 [Branchiostoma floridae]
Length = 165
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y E+YG+ + + + + + G + G+ + A + +++I + H +P
Sbjct: 23 YMEQYGEVVMVQ--IKKDRMTGNSKGFGFVQF-AEYEVQLKVISQRHMIDGNWCDVTIPN 79
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
S+ G++ R++++ E + +D+ YF +FG V DV IP + R F
Sbjct: 80 --------SENEGVIVHERRVFIGRCTED-ISAEDLRAYFQRFGEVTDVVIP-KPFRAFA 129
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
FVTF ET + + G + + GA V V Y K
Sbjct: 130 FVTFQDGETAQSLC--GEHYTIKGASVHVSAYTPK 162
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D+ ++FS +G V + +I + R FGFVTF ++V++++++G + G
Sbjct: 160 STLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGG 219
Query: 415 ARVLVK 420
+V +K
Sbjct: 220 KQVEIK 225
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D+ ++FS +G V + +I + R FGFVTF ++V++++++G + G
Sbjct: 160 STLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGG 219
Query: 415 ARVLVK 420
+V +K
Sbjct: 220 KQVEIK 225
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 363 EQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVC 413
E+ +++YF ++G V D + Q+ R FGFVTF ++V +L+ G PH VC
Sbjct: 13 EESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSSG-PHVVC 66
>gi|427797245|gb|JAA64074.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 517
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 224 IFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPM--------MYYEK 275
+F +A +E+ S LE A+ L +++ + + LP Y+E
Sbjct: 102 VFPKDACLHNSENKRKSDEQLENSTAKTKRLENRQKCSDLIVLGLPWKTSEQDLRQYFET 161
Query: 276 YGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEY 334
+G+ L A+ + + + G++ G+ + + ++ +R + + H +P +
Sbjct: 162 FGEVLMAQ--VKKDPKTGQSKGFGFIRF-SSYESQVRALSKRHLIDGRWCDVKIPNSKD- 217
Query: 335 SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTF 394
G+ S+ SR++++ E + D+ +YFSK+G V DV IP + R F FVTF
Sbjct: 218 -GQASEL------SRKVFVGRCTED-LSSDDLRDYFSKYGEVTDVFIP-KPFRAFAFVTF 268
Query: 395 VFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
V + + + G H + G + V KS
Sbjct: 269 VDPDVAQSLC--GEDHIIRGTSIHVSNAVPKS 298
>gi|390337649|ref|XP_782628.3| PREDICTED: uncharacterized protein LOC577299 [Strongylocentrotus
purpuratus]
Length = 703
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQI 403
+ +I++ E+T TE + + F KFG V +V IP +K R F FVTF E V ++
Sbjct: 121 TNRIFVGGIPENT-TEAAMIDAFGKFGEVVEVEIPPNEKNGKPRGFAFVTFATKEIVGEV 179
Query: 404 LAKGNPHFVCGARVLVKPYREKSRL 428
+A H G +V VK EK +L
Sbjct: 180 VAT-KYHTFLGRKVEVKRAIEKEQL 203
>gi|384244915|gb|EIE18412.1| hypothetical protein COCSUDRAFT_68330 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 363 EQDVSNYFSKFGPVQDVRIPCQQ----KRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
E ++ YF +FG + D+ +P + ++ FGF TF E +++ LA G H + G V
Sbjct: 25 ESQLTEYFGQFGNILDIYLPRDRHNGARKNFGFATFENEEGLQRTLAAGTEHIIAGKTVR 84
Query: 419 VK 420
V
Sbjct: 85 VN 86
>gi|389610037|dbj|BAM18630.1| heterogeneous nuclear ribonucleoprotein 27c [Papilio xuthus]
Length = 318
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 230 NDIRNEDHVFSPGSLERLEAEITELLKQRRGFPI-SIASLPMMYYEKYGKTLQAEGYLTE 288
+D+ +E+ S +RLE ++T G P S Y+E++G+ + + L +
Sbjct: 99 DDVSSEN---SAAKTKRLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQ--LKK 153
Query: 289 SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGS 348
+ G+ + A + +R + + H + +P E G+V
Sbjct: 154 DKNGSFKGFGFIRF-ATYASQMRALAQRHNIDGRWVDVRIPNSKE---------GVVPQM 203
Query: 349 RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGN 408
T D+ YFS FG V DV +P + R FGFVTF+ E + + G
Sbjct: 204 PCKVFVGRCTEDMTADDLREYFSSFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GE 260
Query: 409 PHFVCGARVLV 419
H + GA V V
Sbjct: 261 DHVIKGASVSV 271
>gi|322780873|gb|EFZ10102.1| hypothetical protein SINV_16596 [Solenopsis invicta]
Length = 286
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
T D+ +YFSKFG V DV IP + R F FVTF+ E + + G H + G V V
Sbjct: 20 LTADDLRDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVS 76
Query: 421 PYREKS 426
KS
Sbjct: 77 NAAPKS 82
>gi|307166910|gb|EFN60814.1| TAR DNA-binding protein 43 [Camponotus floridanus]
Length = 284
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
T D+ +YFSKFG V DV IP + R F FVTF+ E + + G H + G V V
Sbjct: 18 LTADDLRDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVS 74
Query: 421 PYREKS 426
KS
Sbjct: 75 NAAPKS 80
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQI 403
+R+I++ A ST TE + NYF +FG + DV + R FGF+T+ E V+++
Sbjct: 105 TRKIFVGGLA-STVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LIK-TFHELNGKMVEVK 179
>gi|428182299|gb|EKX51160.1| hypothetical protein GUITHDRAFT_66239, partial [Guillardia theta
CCMP2712]
Length = 184
Score = 42.0 bits (97), Expect = 0.84, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQ----KRMFGFVTFVFAETVKQILAK---GNPHFV 412
T + + YFS+FG +++ ++ Q R FGF+TF ETV++++++ G PH V
Sbjct: 102 TVKDFEFREYFSRFGNIKEAQVCTDQHTRRSRGFGFITFEKWETVEELISQQQDGRPHVV 161
Query: 413 CGARVLVKP 421
G V V P
Sbjct: 162 EGKEVEVGP 170
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + NYFS+FG V D+ I + R FGF+TF + +V ++L K H + G
Sbjct: 118 TEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVLKK--THVLDGK-- 173
Query: 418 LVKPYR 423
L+ P R
Sbjct: 174 LIDPKR 179
>gi|50305857|ref|XP_452889.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|73918957|sp|Q6CT50.1|CWC2_KLULA RecName: Full=Pre-mRNA-splicing factor CWC2
gi|49642022|emb|CAH01740.1| KLLA0C15411p [Kluyveromyces lactis]
Length = 337
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 189 EFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQI 224
E + C YF KG C G NCRY H P P+ F+++
Sbjct: 68 EGRIHFCLYFAKGMCCLGKNCRYLHHIPEPDDFARL 103
>gi|410896061|ref|XP_003961518.1| PREDICTED: speckle targeted PIP5K1A-regulated poly(A)
polymerase-like [Takifugu rubripes]
Length = 796
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
++ D++ YF +FGPV DV I + K + V F ++++ L+ G H + G+++ VK
Sbjct: 65 ISQTDITEYFQQFGPVSDV-IMDKDKGFYAIVLFSETDSIQATLSCGE-HRLKGSKLRVK 122
Query: 421 PYREKS-RLVDRKY-VEKMQH------PMFCSLHFTDG 450
P +K +L+ +K + +Q P C L DG
Sbjct: 123 PREKKEFKLIPKKSDFQNLQEAFDRLKPQLCQLLNVDG 160
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 314 DRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKF 373
DRPH + +DV E++ P + A ++I++ + T +D++ YF KF
Sbjct: 73 DRPH----KVDGKDVDSKRAMPREETSPE-VHAAVKKIFVG-GLKKDVTNEDLAEYFGKF 126
Query: 374 GPVQDVRIPCQQ----KRMFGFVTFVFAETV-KQILAKGNPHFVCGARVLVKPY--REKS 426
G V D I + R F FVTF ++V K ILA+ PH + G + V+ RE+
Sbjct: 127 GNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILAR--PHMIGGHKADVRKALSREEL 184
Query: 427 RLVDRK 432
R V K
Sbjct: 185 RKVQTK 190
>gi|428175617|gb|EKX44506.1| hypothetical protein GUITHDRAFT_72201, partial [Guillardia theta
CCMP2712]
Length = 164
Score = 42.0 bits (97), Expect = 0.93, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 333 EYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRM 388
E G +SDP V +I++ A ST +E D NYFS++G + D +I ++ R
Sbjct: 79 EAPGPRSDPSDRVT---KIFVGGLA-STVSEADFKNYFSRWGKIMDAQIMVDHNTKRSRG 134
Query: 389 FGFVTFVFAETVKQIL 404
FGF+TF ++V+ ++
Sbjct: 135 FGFITFESYKSVEDVI 150
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 361 FTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
TE D ++F K+G V + +I ++ R FGFV F E V +LA GN + G++
Sbjct: 124 LTEDDFKDFFEKYGAVVEHQIMRDHQTRRSRGFGFVVFESEEVVDDLLANGNMIDLAGSK 183
Query: 417 VLVK 420
V +K
Sbjct: 184 VEIK 187
>gi|91087839|ref|XP_967837.1| PREDICTED: similar to TBPH CG10327-PA [Tribolium castaneum]
Length = 450
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 215 HPMPE--SFSQIFS---PNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLP 269
HP PE +QIF P N +++D+ LE A+ + + R + + LP
Sbjct: 63 HPPPEIGWGTQIFYCVFPKENKRKSDDN------LENSTAKTKRMETKLRCTDLIVLGLP 116
Query: 270 MM--------YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQH 320
Y+E +G+ L A+ + + + G++ G+ + A ++ +R++ + H
Sbjct: 117 WKTTEQNLREYFETFGEVLMAQ--VKKDPKTGQSKGFGFIRF-ASYESQMRVLAQRHMID 173
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVR 380
VP E G I ++++ E T D+ YF K+G V DV
Sbjct: 174 GRWCDVKVPNSKE--------GLIQQVPCKVFIGRCTEE-LTADDLREYFGKYGEVTDVF 224
Query: 381 IPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
IP + R F FVTF+ E + + G H + G V V KS
Sbjct: 225 IP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVSNAAPKS 267
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 340 DPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFV 395
DPG + G + T P + + YFSKFG + +V + ++ R FGFVTF
Sbjct: 20 DPGKMFIGGLS-WQTAP-------EGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFA 71
Query: 396 FAETVKQILAKGNPHFVCGARV---LVKPYREKSRLVDR 431
+V+++LA G PH + G ++ + P R ++V R
Sbjct: 72 DPASVEKVLANG-PHELDGKKIDPKIAFPKRAHPKMVTR 109
>gi|260793326|ref|XP_002591663.1| hypothetical protein BRAFLDRAFT_223429 [Branchiostoma floridae]
gi|229276872|gb|EEN47674.1| hypothetical protein BRAFLDRAFT_223429 [Branchiostoma floridae]
Length = 431
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
SR++++ E + +D+ YF +FG V DV IP + R F FVTF ET + + G
Sbjct: 189 SRKVFIGRCTED-MSAEDLRAYFQQFGEVTDVFIP-KPFRAFAFVTFQDGETAQNLC--G 244
Query: 408 NPHFVCGARVLV 419
H + GA V V
Sbjct: 245 EDHIIKGASVHV 256
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCG 414
TE DV N FS G +Q VR+P + FG+VTF + KQ + N HF+ G
Sbjct: 322 TEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVEM-NGHFIAG 377
>gi|307006509|gb|ADN23539.1| RNA-binding protein musashi subunit HRP1 [Hyalomma marginatum
rufipes]
Length = 208
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 358 ESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQIL 404
ES E D+ YF KFGPV++V +P Q+R F FVTF ++V+ +
Sbjct: 4 ESDMPEADIKAYFEKFGPVENVELPFDKARNQRRQFTFVTFEREDSVELVC 54
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++L K H + G
Sbjct: 115 STITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYK-TFHELNG 173
Query: 415 ARVLVK 420
V VK
Sbjct: 174 KMVEVK 179
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
++ TE + +YFSKFG V + +I + R FGF+TF + V++I+++G + G
Sbjct: 138 TSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGG 197
Query: 415 ARVLVKPYREKSRLVD 430
+V +K K L D
Sbjct: 198 KQVEIKKAEPKKPLPD 213
>gi|270011960|gb|EFA08408.1| hypothetical protein TcasGA2_TC006055 [Tribolium castaneum]
Length = 479
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 215 HPMPE--SFSQIFS---PNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLP 269
HP PE +QIF P N +++D+ LE A+ + + R + + LP
Sbjct: 63 HPPPEIGWGTQIFYCVFPKENKRKSDDN------LENSTAKTKRMETKLRCTDLIVLGLP 116
Query: 270 MM--------YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQH 320
Y+E +G+ L A+ + + + G++ G+ + A ++ +R++ + H
Sbjct: 117 WKTTEQNLREYFETFGEVLMAQ--VKKDPKTGQSKGFGFIRF-ASYESQMRVLAQRHMID 173
Query: 321 SVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVR 380
VP E G I ++++ E T D+ YF K+G V DV
Sbjct: 174 GRWCDVKVPNSKE--------GLIQQVPCKVFIGRCTEE-LTADDLREYFGKYGEVTDVF 224
Query: 381 IPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
IP + R F FVTF+ E + + G H + G V V KS
Sbjct: 225 IP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVSNAAPKS 267
>gi|193716167|ref|XP_001946745.1| PREDICTED: RNA-binding protein squid-like [Acyrthosiphon pisum]
Length = 290
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNP-HFVCGAR 416
TEQDV NYF +FG + + + P QK+ F F+TF +E V Q+L NP + G
Sbjct: 116 TEQDVRNYFVQFGQISEYQQPFDKMKNQKKGFCFITFEDSEVVNQVLK--NPKQVINGKE 173
Query: 417 VLVK 420
V VK
Sbjct: 174 VDVK 177
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++L K H + G
Sbjct: 115 STITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYK-TFHELNG 173
Query: 415 ARVLVK 420
V VK
Sbjct: 174 KMVEVK 179
>gi|402074044|gb|EJT69596.1| hypothetical protein GGTG_13212 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 930
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 191 PVKVCHYFNKGFCKHGNNCRYFH 213
P+K CHYF G C HGN+CR+ H
Sbjct: 40 PIKPCHYFAAGHCAHGNSCRFAH 62
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+++I++ A ST TE D YF +FG + DV + Q+ R FGF+T+ E V ++
Sbjct: 105 TKKIFVGGLA-STVTESDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRV 163
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 164 LHK-TFHELNGKMVEVK 179
>gi|313230121|emb|CBY07825.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 348 SRQIYL-TFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQ 402
+R+I++ P E+ E+ + N+FS+FG + D +P K + FGFVTF V +
Sbjct: 18 ARKIFIGNLPYEAD--EEMLKNHFSRFGEIVDCVVPKDPKTKFAKGFGFVTFTRGTAVDE 75
Query: 403 ILAKGNPHFVCGARVLVKPYREKSR 427
++ PH V G RVL +P R SR
Sbjct: 76 VMTN-RPHKVAG-RVL-EPKRAISR 97
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T TE D YF +FG + DV + Q+ R FGF+T+ + V Q+L K H + G
Sbjct: 116 TVTENDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQK-TFHDLNGK 174
Query: 416 RVLVK 420
V VK
Sbjct: 175 MVEVK 179
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T + + NYF +G ++DV I ++ R FGFVTF+ T+++IL +PHF+ ++
Sbjct: 29 TLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILL-NSPHFLDSKKI 87
Query: 418 LVK-PYREKSRLVDR 431
K +K LVD+
Sbjct: 88 DPKIAIPKKPDLVDK 102
>gi|195503306|ref|XP_002098597.1| GE10456 [Drosophila yakuba]
gi|194184698|gb|EDW98309.1| GE10456 [Drosophila yakuba]
Length = 424
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 315 RPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFG 374
RPH +V++ PK L E R++Y+ + T +DV N+FS FG
Sbjct: 69 RPHQPGAVVVQP--PKRLPPEAE---------TDRRMYVPH-LDQAITHRDVFNFFSSFG 116
Query: 375 PVQDVRIPCQQKRM-FGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKS 426
++ V + + + V F +++Q + K NPH + G R++ + +EKS
Sbjct: 117 DLERVCVKNGTDNLNYAMVLFCRTRSMEQAI-KSNPHLIKGHRLICRKAKEKS 168
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 335 SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFG 390
+G+K DP A +I++ + +++D+ N+FS+FG + DV +P Q++ F
Sbjct: 120 NGKKVDPKKAKARHGKIFVG-GLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFC 178
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVK 420
F+TF + V ++L K + G V VK
Sbjct: 179 FITFESEQVVNELL-KTPKQTINGKEVDVK 207
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
+ + + YFSKFG V +V + ++ R FGFVTF A +V ++LA PH + G ++
Sbjct: 14 SAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLASA-PHELDGKKI 72
Query: 418 LVK---PYREKSRLVDR 431
K P R ++V R
Sbjct: 73 DPKVAFPRRAHPKMVTR 89
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 337 EKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFV 392
+KS P + +R++++ + T TE YFS+FG V + +I + R FGFV
Sbjct: 81 KKSVPQEMKPKARKVFVGGLSPDT-TEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFV 139
Query: 393 TFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
TF + + + A G H + G +V VKP K
Sbjct: 140 TFAEDASAESVFAAGTMHDLGGKKVEVKPATPK 172
>gi|388511807|gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 355 FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQILAKGNPH 410
P E+T +D+ YF +FG + DV IP KR FGFVTF ++ + PH
Sbjct: 62 LPQEAT--TEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARR--PH 117
Query: 411 FVCGARVLV 419
+CG +V +
Sbjct: 118 EICGHQVAI 126
>gi|294897114|ref|XP_002775830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882183|gb|EER07646.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 323
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 349 RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQIL 404
RQ+++ E T+ YFS+FG V+ + + R FGFVT+ + V+ ++
Sbjct: 78 RQLFVGGIPEG-ITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVI 136
Query: 405 AKGNPHFVCGARVLV 419
KG PH + G RV V
Sbjct: 137 MKGGPHQLNGKRVDV 151
>gi|255583972|ref|XP_002532732.1| RNA binding protein, putative [Ricinus communis]
gi|223527509|gb|EEF29634.1| RNA binding protein, putative [Ricinus communis]
Length = 478
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 366 VSNYFSKFGPVQ--DVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYR 423
+ N F KFG ++ +++ CQ+ FGFV F A V+ + + +P + G RV+V+ R
Sbjct: 319 LENEFKKFGSIRAGGIQVRCQKGFCFGFVEFEVASAVQSAI-EASPIMIHGCRVVVEEKR 377
Query: 424 EKSR 427
SR
Sbjct: 378 STSR 381
>gi|442760483|gb|JAA72400.1| Putative splicing factor [Ixodes ricinus]
Length = 138
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ---KRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T+ + NYFS+FG V D + C + R FGFVTF V +LA G PH + G V
Sbjct: 22 TQDGLLNYFSRFGEVVDSVVMCNETGRSRGFGFVTFRDPSCVATVLA-GGPHQLDGRTV 79
>gi|71754457|ref|XP_828143.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833529|gb|EAN79031.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261333939|emb|CBH16933.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 175
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T E + F +FGP++ V+I C +Q R +GFV F A + +Q +A N +
Sbjct: 47 TTVDEVQLRQLFERFGPIESVKIVCDRETRQSRGYGFVKFQSASSAQQAIASLNGFVILN 106
Query: 415 ARVLV 419
R+ V
Sbjct: 107 KRLKV 111
>gi|327272280|ref|XP_003220913.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Anolis
carolinensis]
Length = 486
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDI--RNEDHVFSPGSLE 245
VC YF +G C +G+ CRY H P+ SP+ + D SPG+LE
Sbjct: 94 VCRYFQRGCCAYGDRCRYEHTKPLKREEVTTVSPSTKTFPSASTDVTPSPGTLE 147
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + +FSK+G V + +I + R FGF+ F ETV ++L+ GN + G
Sbjct: 116 SSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAG 175
Query: 415 ARVLVK 420
+V +K
Sbjct: 176 TQVEIK 181
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S TE + ++F+++G V+D +I + R FGF+TF E V +L+ GN G
Sbjct: 2073 SNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAG 2132
Query: 415 ARVLVK 420
++V +K
Sbjct: 2133 SQVEIK 2138
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQ 402
+R+I++ P ++ TE + +FS +G V++ +I + R FGFVTF + V++
Sbjct: 171 TRKIFVGGIP--TSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVER 228
Query: 403 ILAKGNPHFVCGARVLVK 420
++++G H + G +V +K
Sbjct: 229 VMSEGRMHDLGGKQVEIK 246
>gi|443686443|gb|ELT89721.1| hypothetical protein CAPTEDRAFT_175992 [Capitella teleta]
Length = 444
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
+R++++ E T D+ +YF+KFG V DV IP + R F FVTF E + G
Sbjct: 190 NRKVFIGRCTED-MTADDLRSYFNKFGEVVDVFIP-KPFRAFAFVTFADPEVAHALC--G 245
Query: 408 NPHFVCGARVLVKPYREKS 426
H + GA V V KS
Sbjct: 246 EDHIIKGASVHVSNAAPKS 264
>gi|318086976|gb|ADV40080.1| putative RNA-binding protein musashi [Latrodectus hesperus]
Length = 298
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQ 402
G ++I++ ES TE D+ NYF +G V+ V +P Q+R F FVTF TV Q
Sbjct: 134 GIKKIFVG-GIESDMTEADIRNYFEHYGKVEAVELPFDKVKNQRRQFCFVTFEDEMTVDQ 192
Query: 403 ILAK 406
+ +
Sbjct: 193 VCKQ 196
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
++D+ YFSKFG V +V I + R F FV F ++V +L G PH + G ++
Sbjct: 66 NQKDLKEYFSKFGEVTEVNIKTDPTSGRSRGFAFVAFASRDSVDSVLHNG-PHNIKGKQI 124
Query: 418 LVK 420
K
Sbjct: 125 EAK 127
>gi|395332863|gb|EJF65241.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 2372
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 185 PSLPEFPVKVCH-YFNKGFCKHGNNCRYFHGHPMPESFSQ-IFSPNANDIRNEDHVFSPG 242
P++P P VC Y+++GFC G++CR+ H ES SQ P++ + + +P
Sbjct: 54 PAIPRAPHGVCDFYYSRGFCNRGSDCRFRH-----ESPSQGTIQPSSTPAVDVSSLLTPA 108
Query: 243 SLERLEAEITE 253
+L R++ T+
Sbjct: 109 ALARIQGPGTD 119
>gi|209882765|ref|XP_002142818.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558424|gb|EEA08469.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 211
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T ++ + YF +FG + D + C +K R FGFVTF V I+ + H++ G
Sbjct: 107 TTCSQDILRRYFEQFGQISDCVMMCDKKSGVGRGFGFVTFTSTSIVDDIIRAYDEHYIDG 166
Query: 415 ARVLVK 420
V VK
Sbjct: 167 QWVEVK 172
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ F +FGPV+DV +P + R FGFV F FAE + + N H V G R +
Sbjct: 64 EDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLN-HTVIGGREIR 122
Query: 420 KPYREKSR 427
+ E++R
Sbjct: 123 IVFAEENR 130
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S TE + ++F+++G V+D +I + R FGF+TF + V +L+ GN G
Sbjct: 142 SNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAG 201
Query: 415 ARVLVK 420
+V +K
Sbjct: 202 TQVEIK 207
>gi|241833927|ref|XP_002414968.1| splicing factor, putative [Ixodes scapularis]
gi|215509180|gb|EEC18633.1| splicing factor, putative [Ixodes scapularis]
Length = 148
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQ---KRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T+ + NYFS+FG V D + C + R FGFVTF V +LA G PH + G V
Sbjct: 22 TQDGLLNYFSRFGEVVDSVVMCNETGRSRGFGFVTFRDPSCVATVLA-GGPHQLDGRTV 79
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFV-- 412
S TE D+ +YF++FG V +V I Q+ R FGF++F E V + +A+ HFV
Sbjct: 99 SNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAE---HFVNL 155
Query: 413 CGARVLVKPYREKSRLVD 430
G +V +K S++ D
Sbjct: 156 NGKQVEIKRAESSSKMND 173
>gi|413919657|gb|AFW59589.1| hypothetical protein ZEAMMB73_140082 [Zea mays]
Length = 293
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 333 EYSG----EKSDPGGIVAGSRQ-----IYLTFPAESTFTEQDVSNYFSKF 373
EY G ++ G++ G IYL FPA+ST++E+DVSNYF K
Sbjct: 228 EYRGLLCINRATAAGMLLGGEDMHRFPIYLMFPADSTYSEEDVSNYFRKL 277
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+ ++++ A++T +E ++ YFS FG V++V++ ++ R FGFVTF ETVK+
Sbjct: 100 TNKVFIGGVAQNT-SEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVKKT 158
Query: 404 LAKGNPHFVCGARVLVKPYREKS 426
+ H + G V VK ++S
Sbjct: 159 CGV-HFHNINGKSVEVKLAEDRS 180
>gi|347970001|ref|XP_309663.5| AGAP003497-PA [Anopheles gambiae str. PEST]
gi|333466662|gb|EAA05403.6| AGAP003497-PA [Anopheles gambiae str. PEST]
Length = 569
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y+E +G+ L + + + + G++ GY + AR ++ ++ + + H S VP
Sbjct: 134 YFETFGELLVVQ--IKKDSKTGQSKGYGFIRF-ARFESQMKALSKRHLIDSRWCDVKVPS 190
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
+ + + +I+L E ++ D+ +YFSK+G V DV IP + R F
Sbjct: 191 SKDQTQHQM--------PSKIFLGRLTEDINSD-DIRDYFSKYGEVTDVFIP-KPFRAFA 240
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLV 419
FVTF+ + + G H + G V V
Sbjct: 241 FVTFIDPHVAQSLC--GEDHLIKGTSVYV 267
>gi|254578778|ref|XP_002495375.1| ZYRO0B09790p [Zygosaccharomyces rouxii]
gi|238938265|emb|CAR26442.1| ZYRO0B09790p [Zygosaccharomyces rouxii]
Length = 198
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
F E+++S YFS+FG ++D R+ +K R +GF+ FV + K N + + G
Sbjct: 80 FQEKELSKYFSQFGDLKDARLARNKKTGNTRHYGFIEFVNKDDAKVAQETMNNYLLMGHL 139
Query: 417 VLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRL 466
+ V+ + S+ +++ Y K +H F EL R ++ R+
Sbjct: 140 IQVRLLPKGSK-IEKLY--KYRHRSFQFASVKKSSEELKERARKKHDERV 186
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 364 QDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+D+ F +FGP++DV +P ++ R FGFV F ++E + N +CG + +
Sbjct: 72 EDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAKQELNHQVICGREISI 131
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 197 SSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGG 256
Query: 415 ARVLVK 420
+V +K
Sbjct: 257 KQVEIK 262
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 342 GGIVAGSRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVF 396
GG +++I++ PA TE+D NYF +FG + DV + Q+ R FGF++F
Sbjct: 103 GGGSVRTKKIFVGGLPAN--LTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDS 160
Query: 397 AETVKQILAK 406
+ V+ +L K
Sbjct: 161 EDAVESVLQK 170
>gi|332029556|gb|EGI69445.1| TAR DNA-binding protein 43 [Acromyrmex echinatior]
Length = 469
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
T D+ YFSKFG V DV IP + R F FVTF+ E + + G H + G V V
Sbjct: 203 LTADDLREYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVS 259
Query: 421 PYREKS 426
KS
Sbjct: 260 NAAPKS 265
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 40.8 bits (94), Expect = 1.8, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 337 EKSDPGGIVAG----SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKR 387
+++ P G+V +R+I++ PA TE + + +F++FG V + +I + R
Sbjct: 80 KRTIPKGVVGSKDFRTRKIFVGGIPA--VVTEDEFNEFFTQFGEVTEHQIMRDHSTNRSR 137
Query: 388 MFGFVTFVFAETVKQILAKGNPHFVCGARV 417
FGF+TF + V +LA+GN + G +V
Sbjct: 138 GFGFITFDTEQAVDDLLARGNKLELAGTQV 167
>gi|189409089|ref|NP_001121591.1| ziinc finger protein Ci-ZF(C3H)-7 [Ciona intestinalis]
gi|93003058|tpd|FAA00112.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 977
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFH 213
SRR S P+ +++C Y+ G C HG+NC Y H
Sbjct: 249 SRREYSKPKKVMELCQYYASGVCVHGDNCNYMH 281
>gi|427795623|gb|JAA63263.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 420
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 244 LERLEAEITELLKQRRGFPISIASLPM--------MYYEKYGKTLQAEGYLTESQRHGKA 295
LE A+ L +++ + + LP Y+E +G+ L A+ + + + G++
Sbjct: 25 LENSTAKTKRLENRQKCSDLIVLGLPWKTSEQDLRQYFETFGEVLMAQ--VKKDPKTGQS 82
Query: 296 -GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLT 354
G+ + + ++ +R + + H +P + G+ S+ SR++++
Sbjct: 83 KGFGFIRF-SSYESQVRALSKRHLIDGRWCDVKIPNSKD--GQASEL------SRKVFVG 133
Query: 355 FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
E + D+ +YFSK+G V DV IP + R F FVTFV + + + G H + G
Sbjct: 134 RCTED-LSSDDLRDYFSKYGEVTDVFIP-KPFRAFAFVTFVDPDVAQSLC--GEDHIIRG 189
Query: 415 ARVLVKPYREKS 426
+ V KS
Sbjct: 190 TSIHVSNAVPKS 201
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQ--------QKRMFGFVTFVFAET 399
+++I++ A+ FT+ ++ YFS +G V I CQ + R FGFVTF ++
Sbjct: 128 TKKIFVGGIAQ-FFTDDELREYFSPYGNV----IECQIMLDHNTGRSRGFGFVTFDDEDS 182
Query: 400 VKQILAKGNPHFVCGARVLVKPYREKSRLVD 430
V+++ + G H + G +V +K K VD
Sbjct: 183 VEKVFSVGKIHEIGGKQVEIKRAEPKRSGVD 213
>gi|255070081|ref|XP_002507122.1| RNA recognition motif family protein [Micromonas sp. RCC299]
gi|226522397|gb|ACO68380.1| RNA recognition motif family protein [Micromonas sp. RCC299]
Length = 234
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 358 ESTFTEQDVSNYFSKFGPVQDV---RIP-CQQKRMFGFVTFVFAETVKQILAKGNPHFVC 413
+ + E V ++F +FGPV +V R P Q R FGF+TF E+ KQ+L + H +
Sbjct: 22 DRSVDEGVVRSFFQQFGPVVEVLVMRDPHNHQSRGFGFITFQRDESAKQVL-QNRYHDMM 80
Query: 414 GARVLVK 420
G RV VK
Sbjct: 81 GKRVEVK 87
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQI 403
+ +I++ A++ TE++V YFS++G V +V ++ + FGFVTF V Q
Sbjct: 102 THKIFIGGLAQNA-TEEEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQA 160
Query: 404 LAKGNPHFVCGARVLVK 420
+ K + H +CG RV K
Sbjct: 161 VGK-HFHEICGKRVEAK 176
>gi|294925396|ref|XP_002778913.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC 50983]
gi|239887759|gb|EER10708.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQ----KRMFGFVTFVFAE 398
T TE+DV+++FS+FGPV V I + R FGFV F AE
Sbjct: 58 TATEEDVADFFSQFGPVASVEIKMDKVTGRSRGFGFVVFETAE 100
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 340 DPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFV 395
DPG + G + T P + + YFSKFG + +V + ++ R FGFVTF
Sbjct: 49 DPGKMFIGGLS-WQTAP-------EGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFS 100
Query: 396 FAETVKQILAKGNPHFVCGARV---LVKPYREKSRLVDR 431
+V ++LA G PH + G ++ + P R ++V R
Sbjct: 101 DPASVDKVLANG-PHELDGKKIDPKIAFPKRAHPKMVTR 138
>gi|328783809|ref|XP_392590.4| PREDICTED: TAR DNA-binding protein 43-like [Apis mellifera]
gi|340729558|ref|XP_003403067.1| PREDICTED: TAR DNA-binding protein 43-like [Bombus terrestris]
gi|350411720|ref|XP_003489432.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Bombus
impatiens]
gi|350411723|ref|XP_003489433.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Bombus
impatiens]
gi|380018789|ref|XP_003693304.1| PREDICTED: TAR DNA-binding protein 43-like [Apis florea]
gi|383859208|ref|XP_003705088.1| PREDICTED: TAR DNA-binding protein 43-like [Megachile rotundata]
Length = 467
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
T D+ +YFSK+G V DV IP + R F FVTF+ E + + G H + G V V
Sbjct: 203 LTADDLRDYFSKYGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVS 259
Query: 421 PYREKS 426
KS
Sbjct: 260 NAAPKS 265
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T + + +YF KFG + D + + R FGFVTF A +V+Q+LA G PH + G RV
Sbjct: 31 TREQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTFKEAASVEQVLASG-PHEIAG-RV 88
Query: 418 L 418
+
Sbjct: 89 I 89
>gi|167534320|ref|XP_001748838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772800|gb|EDQ86448.1| predicted protein [Monosiga brevicollis MX1]
Length = 514
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 363 EQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+ D+S F FGPV V IP R F FV F E LA GN V G +V
Sbjct: 302 DSDLSEAFGVFGPVSRVTIPRSANGDTRGFAFVVFENPEDRAHALAAGNMLEVGGGKVQY 361
Query: 420 KPYREKSRL 428
YR K L
Sbjct: 362 SAYRTKEEL 370
>gi|294935581|ref|XP_002781457.1| heterogeneous nuclear ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
gi|239892153|gb|EER13252.1| heterogeneous nuclear ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
Length = 489
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 328 VPKYLEYSGEKSDPG---------GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQD 378
P+++ + + ++PG G + S ++++ ++ +D+ +YFS+FG V D
Sbjct: 373 APRFIPHQRDDNEPGSPDQLSGSEGELRWSHKVFVG-GLDAKTKARDLLSYFSQFGDVID 431
Query: 379 VRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREK 425
+ R FGF TF+ E L + + H + G + V+PY K
Sbjct: 432 CVVKSNTTTGSSRGFGFCTFISPEGYSNCLMRQSCHQIRGRNISVQPYSRK 482
>gi|24664592|ref|NP_648764.1| CG7804, isoform A [Drosophila melanogaster]
gi|442632483|ref|NP_001261874.1| CG7804, isoform B [Drosophila melanogaster]
gi|21428322|gb|AAM49821.1| AT09813p [Drosophila melanogaster]
gi|23093435|gb|AAF49643.2| CG7804, isoform A [Drosophila melanogaster]
gi|220949576|gb|ACL87331.1| CG7804-PA [synthetic construct]
gi|220958484|gb|ACL91785.1| CG7804-PA [synthetic construct]
gi|440215819|gb|AGB94567.1| CG7804, isoform B [Drosophila melanogaster]
Length = 318
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPK 330
Y+E YG ++AE + + R G + G+ + + ++ + H VP
Sbjct: 126 YFETYGDVVKAE--IKKDTRSGHSKGFGFVRF-GSYDVQMHVLSKRHSIDGRWCEVKVPA 182
Query: 331 YLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFG 390
+ +PG + G D+ YFSKFG V DV IP + R F
Sbjct: 183 SRGMGNQ--EPGKVFVGR--------CTEDIEADDLREYFSKFGEVIDVFIP-KPFRAFS 231
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVE 435
FVTF L P VCG + ++K D+K V+
Sbjct: 232 FVTF---------LDPYVPRVVCGEKHIIKGVSVHVSTADKKNVQ 267
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 135 SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 194
Query: 416 RVLVK 420
+V +K
Sbjct: 195 QVEIK 199
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQ----KRMFGFVTFVFAETVKQILAKGNPHFV 412
S TE ++ +F++FG VQDV I Q R FGF+TF E+V++++++ H+V
Sbjct: 109 SNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEKVISQ---HYV 163
>gi|145517073|ref|XP_001444425.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411836|emb|CAK77028.1| unnamed protein product [Paramecium tetraurelia]
Length = 263
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 169 FYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHG 214
F +P LG + T + + + +C Y +GFCK+G NC Y HG
Sbjct: 107 FTLDPILGKIPTIDSNIVITNYKTVLCKYDQQGFCKNGVNCPYAHG 152
>gi|18419943|ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana]
gi|23308345|gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQ 402
G++ P E++ D+ +YF +FG +QD IP KR FGFVTF +
Sbjct: 239 GNKIFVGRLPQEASV--DDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADR 296
Query: 403 ILAKGNPHFVCGARVLV 419
+ + H +CG V +
Sbjct: 297 VARRS--HEICGQEVAI 311
>gi|222635668|gb|EEE65800.1| hypothetical protein OsJ_21508 [Oryza sativa Japonica Group]
Length = 830
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 196 HYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
+Y N+G CK G NC++ H P + + S NAN + ++ +++S
Sbjct: 308 YYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNANQVSSQVNIYS 352
>gi|241744067|ref|XP_002414227.1| tar DNA-binding protein, putative [Ixodes scapularis]
gi|215508081|gb|EEC17535.1| tar DNA-binding protein, putative [Ixodes scapularis]
Length = 204
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
SR++++ E T D+ +YFSKFG V DV IP + R F FVTFV + + + G
Sbjct: 78 SRKVFVGRCTED-LTSDDLRDYFSKFGEVTDVFIP-KPFRAFAFVTFVDPDVAQSLC--G 133
Query: 408 NPHFVCGARV 417
H + G +
Sbjct: 134 EDHIIRGTSI 143
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|345802899|ref|XP_537167.3| PREDICTED: nucleoprotein TPR [Canis lupus familiaris]
Length = 2351
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 23 SKIIGYLLLQDHGERDMIRLAFSPDH---LIYSLINEAKM-KLGLGKPTVSPPISPASVA 78
SKI L ++ ++ +L S H L+ S++ + M ++ L + V+ P+ P+S+
Sbjct: 563 SKIAELQLKLENALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQRGVAIPLQPSSLE 622
Query: 79 DLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAED 138
D+ L P ++++ S+PA + P + A + + + ++ + Y A++
Sbjct: 623 DISLASTPKRSSTSQTASTPAPV-----PVIESAEAIEAKAALKQLQEIFENYKKEKADN 677
Query: 139 FCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFY 170
+QN+ Q L+DQ + S N+ S+ +
Sbjct: 678 EKIQNE-QLEKLQDQITDLRSQNTKISTQLDF 708
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|313243959|emb|CBY14841.1| unnamed protein product [Oikopleura dioica]
Length = 457
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAK 406
TE+D++ F +FG VQ +RI K FGFVTF E+VK L K
Sbjct: 327 NMTEEDINGVFEEFGEVQHIRINQGNRADSKNGFGFVTFKSEESVKNALEK 377
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE + +YF +FG ++ + +P ++R F F+TF E VK+IL K H V G++
Sbjct: 308 TEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEK-KFHNVSGSKC 366
Query: 418 LVK 420
+K
Sbjct: 367 EIK 369
>gi|340730016|ref|XP_003403287.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
terrestris]
Length = 169
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 339 SDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTF 394
+DPG + G + T P + + YF+K+G + +V I ++ R FGF+TF
Sbjct: 19 NDPGKMFIGGLS-WQTSP-------ESLREYFTKYGDITEVMIMKDPTTRRSRGFGFITF 70
Query: 395 VFAETVKQILAKGNPHFVCGARVLVK---PYREKSRLVDR 431
+V ++LA+GN H + G ++ K P R ++V R
Sbjct: 71 ADPASVDKVLAQGN-HELDGKKIDPKVAFPRRTHPKMVTR 109
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 40.4 bits (93), Expect = 2.5, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE ++ YFS +G + D +I K R FGFVTF + V++I ++G H + G
Sbjct: 98 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGK 157
Query: 416 RV 417
+V
Sbjct: 158 QV 159
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 165 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 223
Query: 418 LVK 420
+K
Sbjct: 224 EIK 226
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 165 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 223
Query: 418 LVK 420
+K
Sbjct: 224 EIK 226
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|313221681|emb|CBY36161.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAK 406
TE+D++ F +FG VQ +RI K FGFVTF E+VK L K
Sbjct: 352 NMTEEDINGVFEEFGEVQHIRINQGNRADSKNGFGFVTFKSEESVKNALEK 402
>gi|4006877|emb|CAB16795.1| RNA-binding like protein [Arabidopsis thaliana]
gi|7270645|emb|CAB80362.1| RNA-binding like protein [Arabidopsis thaliana]
Length = 306
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 347 GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQ 402
G++ P E++ D+ +YF +FG +QD IP KR FGFVTF +
Sbjct: 183 GNKIFVGRLPQEASV--DDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADR 240
Query: 403 ILAKGNPHFVCGARVLV 419
+ + H +CG V +
Sbjct: 241 VARRS--HEICGQEVAI 255
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|449447311|ref|XP_004141412.1| PREDICTED: uncharacterized protein LOC101211898 [Cucumis sativus]
Length = 238
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
R+I++ + TE++ +YF FG + DV + + R FGFVTF E+V +
Sbjct: 15 GRKIFVG-GLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSV 73
Query: 404 LAKGNPHFVCGARVLVK 420
L + N H + G RV VK
Sbjct: 74 LQR-NFHELNGRRVEVK 89
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T T+++ YF +GPV DV I Q R FGFV+F + V ++L K H + G
Sbjct: 120 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHK-TFHDLSGK 178
Query: 416 RVLVK 420
+V VK
Sbjct: 179 QVEVK 183
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 157 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 215
Query: 418 LVK 420
+K
Sbjct: 216 EIK 218
>gi|255641298|gb|ACU20926.1| unknown [Glycine max]
gi|255642525|gb|ACU21526.1| unknown [Glycine max]
Length = 213
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQ 402
S++I++ P E+T D+ YF +FG + DV +P KR FGFVTF +
Sbjct: 79 SKKIFVGRLPPEAT--SDDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADR 136
Query: 403 ILAKGNPHFVCGARVLV 419
+ + H +CG +V +
Sbjct: 137 VSRR--SHEICGHQVAI 151
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 349 RQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK--RMFGFVTFVFAETVKQILA 405
R IY+T P + E+DV YFSK+GP+ ++ K R +G+V + AE + +
Sbjct: 305 RNIYITNLPGD--LNEEDVVKYFSKYGPINTYKLGTDTKNNRSYGYVFYQKAEDAAKAVE 362
Query: 406 KGNPHFVCG 414
N CG
Sbjct: 363 LANKSEYCG 371
>gi|218198295|gb|EEC80722.1| hypothetical protein OsI_23177 [Oryza sativa Indica Group]
Length = 705
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 196 HYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
+Y N+G CK G NC++ H P + + S NAN + ++ +++S
Sbjct: 165 YYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNANQVSSQVNIYS 209
>gi|156389136|ref|XP_001634848.1| predicted protein [Nematostella vectensis]
gi|156221935|gb|EDO42785.1| predicted protein [Nematostella vectensis]
Length = 1944
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 191 PVKVCHYFNKGFCKHGNNCRYFHG----HPMPESFSQIFSPNANDIRN 234
P C +F KG C G+ C Y H HPMP +F++ + ++ ++ N
Sbjct: 1124 PTIPCRFFAKGNCLKGDRCLYLHAQEASHPMPPTFTETVTCSSYEVTN 1171
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
ST TE ++ ++F+K+G V + ++ + R FGFV F E V ++L+KGN +
Sbjct: 118 STVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMAD 177
Query: 415 ARVLVKPYREKSRL 428
+V +K K L
Sbjct: 178 TQVEIKKAEPKKSL 191
>gi|296490076|tpg|DAA32189.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 361
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQD---VRIPCQQK-RMFGFVTFVFAETVKQILAKGNPHFVCG 414
S TE+ + NY+ ++G + D +R P QK R FGF+TF + +A PHF+ G
Sbjct: 30 SETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAELDAAMA-ARPHFIDG 88
Query: 415 ARVLVK 420
V+ K
Sbjct: 89 KMVMPK 94
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 363 EQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVL 418
+ D+ +YFS+FG + + + Q R FGFVTFV ++V ++ A H +CG V
Sbjct: 385 DSDLFSYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTDSVDRV-ANETLHSICGFPVD 443
Query: 419 VKPYREKSRLVDRK 432
VK K L RK
Sbjct: 444 VKKAVAKDDLNVRK 457
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 362 TEQD-VSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
T+QD + N+FS++G V D + Q+ R FGFVTF A+ V +L+ PH + G +
Sbjct: 52 TDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTVLSAA-PHTIDGRQ 110
Query: 417 VLVKPYREKS 426
V KP K+
Sbjct: 111 VDAKPCNPKA 120
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
++ +E ++ N+FSK+G V + I ++ R FGF+ F + V ILA GN + G
Sbjct: 115 TSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGG 174
Query: 415 ARVLVK 420
+V +K
Sbjct: 175 TQVEIK 180
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 364 QDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+ + YF+K+G + +V + ++ R FGF+TF +V ++LA+GN H + G ++
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGN-HELDGKKIDP 94
Query: 420 K---PYREKSRLVDR 431
K P R ++V R
Sbjct: 95 KVAFPRRTHPKMVTR 109
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 333 EYSGEKSDPG---------GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI-- 381
E G+K DP +V +++I++ + T T +DV NYF +FGP++D +
Sbjct: 86 ELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPT-TLEDVKNYFEQFGPIEDAMLMF 144
Query: 382 --PCQQKRMFGFVTFVFAETVKQI 403
+ R FGFVTF + V ++
Sbjct: 145 DKQTNRHRGFGFVTFQSEDVVDKV 168
>gi|291237256|ref|XP_002738551.1| PREDICTED: TAR DNA binding protein-like [Saccoglossus kowalevskii]
Length = 311
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKG 407
R++++ E T++D+ +YF++FG V DV IP + R F FVTF AE + +
Sbjct: 194 GRKVFVGRVTED-ITKEDLYSYFTQFGEVVDVFIP-KPFRFFAFVTFADAEVAQSL---- 247
Query: 408 NPHFVCGARVLVK 420
CG ++VK
Sbjct: 248 -----CGEDLIVK 255
>gi|440897852|gb|ELR49462.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 349
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQD---VRIPCQQK-RMFGFVTFVFAETVKQILAKGNPHFVCG 414
S TE+ + NY+ ++G + D +R P QK R FGF+TF + +A PHF+ G
Sbjct: 29 SETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAELDAAMAA-RPHFIDG 87
Query: 415 ARVLVK 420
V+ K
Sbjct: 88 KMVMPK 93
>gi|115468286|ref|NP_001057742.1| Os06g0520600 [Oryza sativa Japonica Group]
gi|75252736|sp|Q5Z5Q3.1|C3H43_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=OsC3H43
gi|54291262|dbj|BAD62014.1| translation initiation factor eIF-4F isozyme form subunit p82-like
[Oryza sativa Japonica Group]
gi|113595782|dbj|BAF19656.1| Os06g0520600 [Oryza sativa Japonica Group]
Length = 711
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 196 HYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
+Y N+G CK G NC++ H P + + S NAN + ++ +++S
Sbjct: 165 YYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNANQVSSQVNIYS 209
>gi|289741549|gb|ADD19522.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 531
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ +YFSKFG V DV IP + R F FVTF+ E + + G H + G V V P
Sbjct: 207 DLKDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGISVHVSNAAP 263
Query: 422 YREKSR 427
E++R
Sbjct: 264 KGEQNR 269
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 364 QDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLV 419
+ + YF+K+G + +V + ++ R FGF+TF +V ++LA+GN H + G ++
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGN-HELDGKKIDP 94
Query: 420 K---PYREKSRLVDR 431
K P R ++V R
Sbjct: 95 KVAFPRRTHPKMVTR 109
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 333 EYSGEKSDPG---------GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI-- 381
E G+K DP +V +++I++ + T T +DV NYF +FGP++D +
Sbjct: 86 ELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPT-TLEDVKNYFEQFGPIEDAMLMF 144
Query: 382 --PCQQKRMFGFVTFVFAETVKQI 403
+ R FGFVTF + V ++
Sbjct: 145 DKQTNRHRGFGFVTFQSEDVVDKV 168
>gi|148234971|ref|NP_001086242.1| probable E3 ubiquitin-protein ligase makorin-1 [Xenopus laevis]
gi|82200985|sp|Q6GLT5.1|MKRN1_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|49256484|gb|AAH74368.1| MGC84269 protein [Xenopus laevis]
Length = 408
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 182 RRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSP 241
R P+ PE ++C Y G C++G NC Y HG P Q+ P + + H+ S
Sbjct: 167 REEPADPELKKQLCPYAAMGECRYGENCVYLHGDPCDMCGLQVLHP-VDTCQRSQHIKS- 224
Query: 242 GSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLT 287
+E E ++ +R I + YEK + + G L+
Sbjct: 225 -CIEAHEKDMELSFAVQRSKDIVCGICMEVVYEKTNPSERRFGILS 269
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|443729073|gb|ELU15125.1| hypothetical protein CAPTEDRAFT_228588 [Capitella teleta]
Length = 224
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPE 219
KVC+ F +G CK G+ CR+FH + P+
Sbjct: 126 KVCYNFRRGCCKRGSKCRFFHDNSTPQ 152
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 40.0 bits (92), Expect = 3.2, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE ++ YFS +G + D +I K R FGFVTF + V++I ++G H + G
Sbjct: 83 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGK 142
Query: 416 RV 417
+V
Sbjct: 143 QV 144
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|302687148|ref|XP_003033254.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
gi|300106948|gb|EFI98351.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
Length = 1239
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 13/148 (8%)
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDI-RNEDHVFSPGSLERLEAEIT 252
VC ++ KG C HG NCRY H + F + +P N R S S + +
Sbjct: 201 VCRFWLKGTCMHGKNCRYKHSNESRNVFDKSPAPRGNSTSRASPRGSSTSSPAPWGSSAS 260
Query: 253 ELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLL----ARLKN 308
+ + + KYG + + E + ES+ + GY+ +K +R +
Sbjct: 261 APGRD-------VCRFWLKGDCKYGNSCRYE-HSNESRETAQRGYNSSKGRGSDPSRGRG 312
Query: 309 SIRLIDRPHGQHSVILAEDVPKYLEYSG 336
+ R D P G+ S D P+ +G
Sbjct: 313 TPRGYDSPRGRGSTRGGYDSPRGRSANG 340
>gi|195149343|ref|XP_002015617.1| GL10927 [Drosophila persimilis]
gi|198462059|ref|XP_001352323.2| GA10247 [Drosophila pseudoobscura pseudoobscura]
gi|194109464|gb|EDW31507.1| GL10927 [Drosophila persimilis]
gi|198139765|gb|EAL29286.2| GA10247 [Drosophila pseudoobscura pseudoobscura]
Length = 540
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ YFSKFG V DV IP + R F FVTF F V Q L G H + G V V P
Sbjct: 207 DLREYFSKFGEVTDVFIP-RPFRAFSFVTF-FDPDVAQSLC-GEDHIIKGVSVHVSNAAP 263
Query: 422 YREKSR 427
E+SR
Sbjct: 264 KAEQSR 269
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 182 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 240
Query: 418 LVK 420
+K
Sbjct: 241 EIK 243
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQIL 404
ST TE D YF +FG + DV + Q+ R FGF+T+ + V ++L
Sbjct: 116 STITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVL 165
>gi|240849025|ref|NP_001155653.1| nucleolar phosphoprotein-like [Acyrthosiphon pisum]
gi|239788809|dbj|BAH71066.1| ACYPI006149 [Acyrthosiphon pisum]
Length = 175
Score = 40.0 bits (92), Expect = 3.4, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGAR 416
F E ++ +YF++FG V ++ IP +K R + FV F++ E V +++A+ +++ +
Sbjct: 38 FYENEMKHYFAQFGEVTNINIPKSKKTGKARGYAFVEFLYPE-VAKVVAETMNNYLMHKK 96
Query: 417 VLVKPYREKSRL 428
+LV Y E +++
Sbjct: 97 ILVAKYLEPNQV 108
>gi|255565200|ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein, putative [Ricinus communis]
Length = 359
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQILAKGNPHFVCGARV 417
T +D+ YF +FG + DV +P KR FGFVTF E V +++ H +CG +V
Sbjct: 236 TPEDLRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFA-EEGVADRVSR-RSHEICGHQV 293
Query: 418 LV 419
+
Sbjct: 294 AI 295
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 160 TEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 218
Query: 418 LVK 420
+K
Sbjct: 219 EIK 221
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|357631285|gb|EHJ78874.1| TAR DNA binding protein-like protein [Danaus plexippus]
Length = 305
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 343 GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQ 402
G A R++++ ES T D+ YF FG V DV +P + R F FVTF+ E +
Sbjct: 170 GSSAAHRKVFVGRCTES-LTADDLREYFGAFGQVTDVFVP-KPFRAFSFVTFLDPEVAQS 227
Query: 403 ILAKGNPHFVCGARVLV---KPYREKS 426
+ G H + G V + P RE S
Sbjct: 228 LC--GQDHVIKGVSVNISTASPKREHS 252
>gi|71033517|ref|XP_766400.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353357|gb|EAN34117.1| hypothetical protein TP01_0879 [Theileria parva]
Length = 322
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T +D+ YFSKFG V I + R FGFVTF E+V +L K + A V
Sbjct: 68 TPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERESVNTVLRKSHTIDGVEADV 127
Query: 418 LVKPYREKSRLVDRKY 433
+ +EK++++ +Y
Sbjct: 128 KLAVRKEKAKILAPQY 143
>gi|112983234|ref|NP_001037606.1| TAR DNA binding protein homolog [Bombyx mori]
gi|95115208|gb|ABF55970.1| TBPH [Bombyx mori]
Length = 286
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 349 RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGN 408
R++++ E+ T +D+ YF FG V DV +P + R F FVTF+ E + + G
Sbjct: 173 RKVFVGRCTEN-ITAEDLREYFGSFGQVTDVFVP-RPFRAFSFVTFLDPEVARSLC--GQ 228
Query: 409 PHFVCGARVLV---KPYREKS 426
H + G V + P RE+S
Sbjct: 229 DHIIKGVSVNISTASPKRERS 249
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ S+ TE D YF +FG DV + Q+ R FGF+T+ E V+++
Sbjct: 107 TRKIFVG-GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 166 LLK-TFHELNGKMVEVK 181
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ S+ TE D YF +FG DV + Q+ R FGF+T+ E V+++
Sbjct: 107 TRKIFVG-GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 166 LLK-TFHELNGKMVEVK 181
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ S+ TE D YF +FG DV + Q+ R FGF+T+ E V+++
Sbjct: 107 TRKIFVG-GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 166 LLK-TFHELNGKMVEVK 181
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAK 406
T TE D YF +FG + DV + Q+ R FGF+TF E V +++ K
Sbjct: 114 TVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMK 164
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ S+ TE D YF +FG DV + Q+ R FGF+T+ E V+++
Sbjct: 107 TRKIFVG-GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 166 LLK-TFHELNGKMVEVK 181
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 172 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 230
Query: 418 LVK 420
+K
Sbjct: 231 EIK 233
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T+Q + +YFS+FG VQ+ + + R FGF+TF A+TV ++ K H++ G
Sbjct: 11 TDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVK--EHYLDGK-- 66
Query: 418 LVKPYR 423
++ P R
Sbjct: 67 IIDPKR 72
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 348 SRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQI 403
+R+I++ S+ TE D YF +FG DV + Q+ R FGF+T+ E V+++
Sbjct: 107 TRKIFVG-GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165
Query: 404 LAKGNPHFVCGARVLVK 420
L K H + G V VK
Sbjct: 166 LLK-TFHELNGKMVEVK 181
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 39.7 bits (91), Expect = 3.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ T+++ +YF+ FG V + +I + R FGFVTF + V+ ILA G H + G
Sbjct: 100 SITDEEFKSYFAGFGSVMEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKLHELAGK 159
Query: 416 RV 417
+V
Sbjct: 160 QV 161
>gi|241154571|ref|XP_002407336.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494097|gb|EEC03738.1| conserved hypothetical protein [Ixodes scapularis]
Length = 275
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 358 ESTFTEQDVSNYFSKFGPVQDVRIPCQ---QKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
++ TE + F + GPV++V+IP Q + F FVTFV A+++ LA + G
Sbjct: 16 DAKVTEDLLRELFVQGGPVEEVKIPKTSDGQSKNFAFVTFVHADSLSYSLALLEGTCLFG 75
Query: 415 ARVLVKPYREKSRLVDRKYVEKM 437
R+ ++ R +D KYV+ M
Sbjct: 76 RRLKLE--RRPRATIDDKYVDMM 96
>gi|431892736|gb|ELK03169.1| Heterogeneous nuclear ribonucleoprotein A/B [Pteropus alecto]
Length = 230
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 64 TEEKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 122
Query: 418 LVK 420
+K
Sbjct: 123 EIK 125
>gi|47226027|emb|CAG04401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 475
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
++ D+++YF +FGPV DV I + K ++ V F ++++ L+ G H + G ++ VK
Sbjct: 39 ISQADITDYFQQFGPVSDV-IMDKDKGVYAIVLFGETDSIQAALSCGE-HRLKGLKLRVK 96
Query: 421 PYREKS-RLVDRK 432
P +K +L+ +K
Sbjct: 97 PREKKEFKLIPKK 109
>gi|301624736|ref|XP_002941657.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Xenopus (Silurana) tropicalis]
Length = 306
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240
R P+ PE ++C Y G C++G NC Y HG P Q+ P R++ H+ S
Sbjct: 86 CREQPADPELKKQLCPYAAVGECRYGENCVYLHGDPCDMCGLQVLHPVDTAQRSQ-HIKS 144
Query: 241 PGSLERLEAEITELLKQRRGFPISIASLPMMYYEK 275
+E E ++ +R I + YEK
Sbjct: 145 --CIEAHEKDMELSFAVQRSKDIVCGICMEVVYEK 177
>gi|356496896|ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 362
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 348 SRQIYLT-FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRM----FGFVTFVFAETVKQ 402
S++I++ P E+T D+ YF +FG + DV +P KR FGFVTF +
Sbjct: 228 SKKIFVGRLPPEAT--SDDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADR 285
Query: 403 ILAKGNPHFVCGARVLV 419
+ + H +CG +V +
Sbjct: 286 VSRR--SHEICGHQVAI 300
>gi|389637880|ref|XP_003716573.1| CCCH zinc finger domain-containing protein [Magnaporthe oryzae
70-15]
gi|351642392|gb|EHA50254.1| CCCH zinc finger domain-containing protein [Magnaporthe oryzae
70-15]
Length = 614
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 192 VKVCHYFNKGFCKHGNNCRYFH 213
+ +C +F +G+CK+GNNCR+ H
Sbjct: 1 MTLCKFFQQGYCKNGNNCRFEH 22
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQD----VRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE+D+ YFS +G V V +KR FGFV F + V +I KG+ H + G
Sbjct: 109 SITEEDLKEYFSPYGNVTSAALVVHKETGKKRGFGFVEFDDYDPVDKICLKGS-HIIKGK 167
Query: 416 RVLVKPYREKSRLV 429
++ VK K +
Sbjct: 168 KIDVKKALSKEEMA 181
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 199 SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 258
Query: 416 RVLVK 420
+V +K
Sbjct: 259 QVEIK 263
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T T + V F KFG ++DV +P + R FGFV F E+ K+ + + + + GA
Sbjct: 18 TTTPELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYKLESAKEAVKEMDNKTIDGA 77
Query: 416 RVLVKP 421
V V P
Sbjct: 78 TVSVTP 83
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 199 SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 258
Query: 416 RVLVK 420
+V +K
Sbjct: 259 QVEIK 263
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPH--GQHSVILAEDV 328
Y++KYG+ ++A + + G+A G+ + A + R+I H V + V
Sbjct: 25 YFDKYGEVVEA--VIMRDRATGRARGFGFI-VFADPAVAERVIMEKHMIDGRMVEAKKAV 81
Query: 329 PKYLEYSGEKSDPGGIVAGS------RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI- 381
P+ +++ KS GG GS ++I++ A ST TE D YF +FG + DV +
Sbjct: 82 PRDDQHALSKS--GGSAHGSPGPSRTKKIFVGGLA-STVTEADFRKYFEQFGTITDVVVM 138
Query: 382 ---PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
Q+ R FGF+T+ + V + L K H + G V VK
Sbjct: 139 YDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEVK 179
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G+++
Sbjct: 95 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKI 153
Query: 418 LV 419
V
Sbjct: 154 KV 155
>gi|297829856|ref|XP_002882810.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328650|gb|EFH59069.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 231
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGN 408
ST TE ++ ++FSK+G V + ++ + R FGFV F E V ++L+KGN
Sbjct: 118 STVTEDELKDFFSKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGN 171
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T +++ YFS++G V D + + R FGFVTF E V + L G PH + G +
Sbjct: 24 THENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALENG-PHTLDGRTI 82
Query: 418 LVKPYREKSR 427
KP +S+
Sbjct: 83 DPKPCNPRSQ 92
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPCQ----QKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T++D+ YF KFGPV D I + R FGFV F +V+++L + H + G
Sbjct: 95 TQKDLKEYFKKFGPVVDCTIKIDPVTGRSRGFGFVLFADGASVEKVL-QPQEHKLDGR-- 151
Query: 418 LVKPYREKSR 427
++ P R K+R
Sbjct: 152 IIDPKRAKAR 161
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|366989989|ref|XP_003674762.1| hypothetical protein NCAS_0B03040 [Naumovozyma castellii CBS 4309]
gi|342300626|emb|CCC68388.1| hypothetical protein NCAS_0B03040 [Naumovozyma castellii CBS 4309]
Length = 590
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 9/33 (27%)
Query: 181 SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFH 213
SRR+P C YF G CK+GNNCR+ H
Sbjct: 13 SRRTP---------CKYFQTGTCKNGNNCRFAH 36
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 191 SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 250
Query: 416 RVLVK 420
+V +K
Sbjct: 251 QVEIK 255
>gi|303275576|ref|XP_003057082.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461434|gb|EEH58727.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 928
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 235 EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQA------EGYLTE 288
E H P L ++ EI +LL R +SIA LP Y + Y K L Y E
Sbjct: 174 EPHPMDP--LRFVKYEIRQLLLARGS--LSIAQLPEEYLKCYRKPLTTALKVLDSQYTPE 229
Query: 289 SQRHGKAGYSLTK------LLARLKNSIRLIDRPHGQHSVILA 325
S R GK G K L L + I + RPHGQH ++ A
Sbjct: 230 SARSGKPGGRARKSTLGAFLREHLMDVIEVRQRPHGQHVIVAA 272
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPH--GQHSVILAEDV 328
Y+EKYG+ ++A + + G+A G+ + A + R+I H V + V
Sbjct: 25 YFEKYGEVVEA--VIMRDRATGRARGFGFI-VFADPAVAERVIMEKHMIDGRMVEAKKAV 81
Query: 329 PKYLEYSGEKSDPGGIVAGS------RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI- 381
P+ + + KS GG GS ++I++ A ST TE D YF +FG + DV +
Sbjct: 82 PRDDQQALSKS--GGSAHGSPGPSRTKKIFVGGLA-STVTEADFRTYFEQFGTITDVVVM 138
Query: 382 ---PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
Q+ R FGF+T+ + V + L K H + G V VK
Sbjct: 139 YDHNTQRPRGFGFITYDSEDAVDKALFK-TFHELNGKMVEVK 179
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 166 TEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+T+ E VK++L K H V G++
Sbjct: 166 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKKVLEK-KFHTVSGSKC 224
Query: 418 LVK 420
+K
Sbjct: 225 EIK 227
>gi|396475683|ref|XP_003839845.1| hypothetical protein LEMA_P112850.1 [Leptosphaeria maculans JN3]
gi|312216415|emb|CBX96366.1| hypothetical protein LEMA_P112850.1 [Leptosphaeria maculans JN3]
Length = 877
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 CHYFNKGFCKHGNNCRYFHG 214
CH+F +G CK+G +CRY HG
Sbjct: 796 CHFFQRGSCKNGASCRYVHG 815
>gi|294940850|ref|XP_002782901.1| hypothetical protein Pmar_PMAR008131 [Perkinsus marinus ATCC 50983]
gi|239895056|gb|EER14697.1| hypothetical protein Pmar_PMAR008131 [Perkinsus marinus ATCC 50983]
Length = 137
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 167 SYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNK-GFCKHGNNCRYFH 213
S F+ P+ +S+ P + K C YFN+ G CKHG+ C+Y H
Sbjct: 58 SSFFKNPSKTQSFSSQGQPQKAKNETKPCRYFNRTGNCKHGDKCKYSH 105
>gi|145525960|ref|XP_001448791.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416357|emb|CAK81394.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 172 EPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHG 214
+P LG + T + + + +C Y +GFCK+G NC Y HG
Sbjct: 50 DPILGKIPTIDSNIVITNYKTVLCKYDQQGFCKNGVNCPYAHG 92
>gi|281353044|gb|EFB28628.1| hypothetical protein PANDA_009876 [Ailuropoda melanoleuca]
Length = 654
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 182 RRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQI 224
+R+ L FP C F +G C+HG+ C Y H P PE +++
Sbjct: 590 QRAARLKTFP---CKRFKEGTCQHGDQCCYSHSSPTPEDTAEV 629
>gi|225438475|ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
Length = 542
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+DV +FSK G V+DVR+ ++ + G++ F A +V +A H + G V
Sbjct: 182 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSG-HLLHGQPV 240
Query: 418 LVKPYREKSRLV 429
+VKP + LV
Sbjct: 241 MVKPSEAEKNLV 252
>gi|345566223|gb|EGX49167.1| hypothetical protein AOL_s00078g551 [Arthrobotrys oligospora ATCC
24927]
Length = 437
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEIT 252
+ C YF+KG C GN+C+Y+H P S SP I LE L +
Sbjct: 19 RACKYFSKGQCTRGNSCQYYHETPSTNS-----SPGLRTIE-----IDLSDLESLNSAEL 68
Query: 253 ELLKQRRGFPISIASL--PMMYYEKY 276
E PIS++ L + Y+KY
Sbjct: 69 EAFNLEDDGPISLSELHPESIAYKKY 94
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|242033337|ref|XP_002464063.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
gi|241917917|gb|EER91061.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
Length = 1390
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 166 SSYFYP--EPAL-GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFS 222
SS ++P EPAL G + P PE P Y G CK G NC++ H + S
Sbjct: 1171 SSRYHPKKEPALSGELMVYPDRPGEPECPF----YVKTGSCKFGANCKFHHPKDIAPSMQ 1226
Query: 223 QIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGK 278
SP + NE H + +L+ + + Q++ +P YY ++GK
Sbjct: 1227 GPASPKRSVAANEHHPAARTTLQ-------DQMYQQQKYPERPGQPDCRYYMQFGK 1275
>gi|294892295|ref|XP_002773992.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
gi|239879196|gb|EER05808.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
Length = 274
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITE 253
VCH+F KG CK+G+ CR+ H E+ I SP A I E G+ LEA
Sbjct: 58 VCHFFVKGECKNGDTCRFLHQQQEEET---IDSPKALVIFLERLSHHKGARFCLEA---- 110
Query: 254 LLKQR 258
LLKQ+
Sbjct: 111 LLKQK 115
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414
+T TE + +F ++G V + +I + R FGF+TF + V +LAKGN + G
Sbjct: 2024 TTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAG 2083
Query: 415 ARVLVK 420
+V +K
Sbjct: 2084 GQVEIK 2089
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGKA-GYSLTKLLARLKNSIRLIDRPH--GQHSVILAEDV 328
Y+EKYG+ ++A + + G+A G+ + A + R+I H V + V
Sbjct: 25 YFEKYGEVVEA--VIMRDRATGRARGFGFI-VFADPAVAERVIMEKHMIDGRMVEAKKAV 81
Query: 329 PKYLEYSGEKSDPGGIVAGS------RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI- 381
P+ + + KS GG GS ++I++ A ST E D YF +FG + DV +
Sbjct: 82 PRDDQQALSKS--GGSTHGSPGPSRTKKIFVGGLA-STVNEADFRTYFEQFGTITDVVVM 138
Query: 382 ---PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
Q+ R FGF+T+ E V + L K H + G V VK
Sbjct: 139 YDHNTQRPRGFGFITYDSEEAVDKALFK-TFHELNGKMVEVK 179
>gi|297847276|ref|XP_002891519.1| hypothetical protein ARALYDRAFT_337099 [Arabidopsis lyrata subsp.
lyrata]
gi|297337361|gb|EFH67778.1| hypothetical protein ARALYDRAFT_337099 [Arabidopsis lyrata subsp.
lyrata]
Length = 1163
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 195 CHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITEL 254
C YFN G+C++GN+C++ H E S + + + +R+ +E+ E
Sbjct: 434 CIYFNSGYCRYGNSCKFSHRISGEEKTSSVAT-----------IMKIPERKRILSELPEK 482
Query: 255 LKQRRGFPISIASLPMMYYEKYGKTLQAE---GYLTESQRHG 293
+K+ ++I+ EKY KT E G++ E++R G
Sbjct: 483 IKKDME-SVNIS-------EKYAKTCLGEKRYGFIKETKRIG 516
>gi|296082546|emb|CBI21551.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+DV +FSK G V+DVR+ ++ + G++ F A +V +A H + G V
Sbjct: 144 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSG-HLLHGQPV 202
Query: 418 LVKPYREKSRLV 429
+VKP + LV
Sbjct: 203 MVKPSEAEKNLV 214
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 22/158 (13%)
Query: 272 YYEKYGKTLQA----EGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAED 327
Y+ KYG+ + A + Y + + G +S ++ R+ +ID + + +
Sbjct: 33 YFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVIEDNHVIDGKQVEIKRTIPKG 92
Query: 328 VPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PC 383
++ +K GG+V ST + + ++FSKFG V + I
Sbjct: 93 AAPLKDFKTKKIFVGGLV-------------STLKDDEFKDFFSKFGKVVEHEIIRDHST 139
Query: 384 QQKRMFGFVTFVFAETVKQILA-KGNPHFVCGARVLVK 420
+ R FGF+ F +TV ++LA KGN + G +V +K
Sbjct: 140 NKSRGFGFIVFDAEKTVDELLAKKGNMIDLDGTQVEIK 177
>gi|301771248|ref|XP_002921033.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase-like
[Ailuropoda melanoleuca]
Length = 675
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 182 RRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQI 224
+R+ L FP C F +G C+HG+ C Y H P PE +++
Sbjct: 611 QRAARLKTFP---CKRFKEGTCQHGDQCCYSHSSPTPEDTAEV 650
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 170 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 228
Query: 418 LVK 420
+K
Sbjct: 229 EIK 231
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H V G++
Sbjct: 95 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTVSGSKC 153
Query: 418 LVK 420
+K
Sbjct: 154 EIK 156
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T TE+D+ FSK GP+ DV P ++ + F FVT++ E LA+ + H G
Sbjct: 409 TCTEEDIKELFSKHGPLSDVLFPIDTLTKRPKGFAFVTYMIPENAVTALAQLDGHIFQGR 468
Query: 416 RVLVKPYREKSRLVD 430
+ + P K D
Sbjct: 469 MLHLLPSTAKKEKSD 483
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 164 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 222
Query: 418 LVK 420
+K
Sbjct: 223 EIK 225
>gi|328783731|ref|XP_623522.3| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform 2
[Apis mellifera]
Length = 486
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 333 EYSGEKSDPG---------GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI-- 381
E G+K DP +V +++I++ + T T +DV NYF +FGP++D +
Sbjct: 162 ELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPT-TLEDVKNYFEQFGPIEDAMLMF 220
Query: 382 --PCQQKRMFGFVTFVFAETVKQI 403
+ R FGFVTF + V ++
Sbjct: 221 DKQTNRHRGFGFVTFQSEDVVDKV 244
>gi|344297146|ref|XP_003420260.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Loxodonta
africana]
Length = 482
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNAN 230
VC YF +G+C +G+ CRY H P+ + + P A
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATDPTAK 125
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 190 SLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGK 249
Query: 416 RVLVK 420
+V +K
Sbjct: 250 QVEIK 254
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+DV +FSK G V+DVR+ ++ + G++ F A +V +A H + G V
Sbjct: 108 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSG-HLLHGQPV 166
Query: 418 LVKPYREKSRLV 429
+VKP + LV
Sbjct: 167 MVKPSEAEKNLV 178
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 68 SLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGK 127
Query: 416 RVLVK 420
+V +K
Sbjct: 128 QVEIK 132
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 127 SLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGK 186
Query: 416 RVLVK 420
+V +K
Sbjct: 187 QVEIK 191
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|198435807|ref|XP_002121392.1| PREDICTED: similar to CiMsi [Ciona intestinalis]
Length = 392
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 362 TEQDVSNYFSKFGPVQDV------RIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T++DV YF ++G V +V P + + FGFVTF +V Q +AK + H +
Sbjct: 117 TQEDVKGYFERYGTVAEVVFVLNKEDPSKPHKGFGFVTFEDESSVDQAIAK-HYHTIKDK 175
Query: 416 RVLVKPYREKSRL 428
R+ K + R+
Sbjct: 176 RIEAKKAESRERM 188
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ TE + +FS +G V + +I + R FGFVTF + V++++++G H + G
Sbjct: 60 SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 119
Query: 416 RVLVK 420
+V +K
Sbjct: 120 QVEIK 124
>gi|195036932|ref|XP_001989922.1| GH19059 [Drosophila grimshawi]
gi|193894118|gb|EDV92984.1| GH19059 [Drosophila grimshawi]
Length = 391
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 349 RQIYLTFPAESTFTEQDVSNYFSKFGPVQD---VRIPCQQK-RMFGFVTFVFAETVKQIL 404
R+I++ + +T T + + ++FS+FG V D +R P + R FGFVTFV A +V+ +
Sbjct: 47 RRIFVGGLSLNT-TAETMRHFFSQFGDVADAIVMRDPISNRSRCFGFVTFVEAASVENV- 104
Query: 405 AKGNPHFVCGARVLVK 420
+ PH V G V K
Sbjct: 105 QRTRPHIVDGKTVETK 120
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIPC----QQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 171 TEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK-KFHTVSGSKC 229
Query: 418 LVK 420
+K
Sbjct: 230 EIK 232
>gi|395859906|ref|XP_003802268.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-3 [Otolemur
garnettii]
Length = 513
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 15/54 (27%)
Query: 176 GHVRTSRRSPSLPEFPV---------------KVCHYFNKGFCKHGNNCRYFHG 214
G R S S+PE PV ++C YF +G+C +G++CRY HG
Sbjct: 217 GQPYRGRMSLSIPEAPVHWVPKREQMAVGIRRQICRYFARGYCYYGDSCRYSHG 270
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 95 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 153
Query: 418 LVK 420
+K
Sbjct: 154 EIK 156
>gi|242223597|ref|XP_002477402.1| predicted protein [Postia placenta Mad-698-R]
gi|220723054|gb|EED77399.1| predicted protein [Postia placenta Mad-698-R]
Length = 271
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 160 VNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPE 219
+ D ++S + P + + + PS+ +F + + G CKHG CR+ GH + E
Sbjct: 127 TSEDLTNSPPFVRPLVDEEMINEKHPSV-DFSTRCPIFERTGECKHGLKCRFLGGH-VRE 184
Query: 220 SFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRR-GFPISIASLPMMYY----- 273
I N N+ + D + + ++A +L++ ++ PIS A L ++
Sbjct: 185 GEGAILELNINEDKKADTAIAETEVNFIDANTLKLIRTKKYPQPISEAYLKVLLESTGDD 244
Query: 274 EKYGKTLQ-AEGYLTESQR 291
EK K Q A+G + +Q+
Sbjct: 245 EKGSKGSQPADGEIQPAQK 263
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 96 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 154
Query: 418 LVK 420
+K
Sbjct: 155 EIK 157
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
+ T+++ +YF+ FG V + +I + R FGFVTF + V+ ILA G H + G
Sbjct: 100 SITDEEFKSYFASFGSVVEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKMHELGGK 159
Query: 416 RV 417
+V
Sbjct: 160 QV 161
>gi|14388456|dbj|BAB60767.1| hypothetical protein [Macaca fascicularis]
Length = 183
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 64 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 122
Query: 418 LVK 420
+K
Sbjct: 123 EIK 125
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAE 398
T TE+D+ FSK+GP+ ++ P ++ + FGFVTF+F E
Sbjct: 449 TSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPE 491
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 333 EYSGEKSDPG---------GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI-- 381
E G+K DP +V +++I++ + T T +DV NYF +FGP++D +
Sbjct: 86 ELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPT-TLEDVKNYFEQFGPIEDAMLMF 144
Query: 382 --PCQQKRMFGFVTFVFAETVKQI 403
+ R FGFVTF + V ++
Sbjct: 145 DKQTNRHRGFGFVTFQSEDVVDKV 168
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRI---PCQQK-RMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE + YFSK+G V D I P ++ R FGFVTF +V++++ G PH + +
Sbjct: 24 TEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKNG-PHTLDNKTI 82
Query: 418 LVKPYREKS 426
KP KS
Sbjct: 83 DPKPATMKS 91
>gi|449542379|gb|EMD33358.1| hypothetical protein CERSUDRAFT_117976 [Ceriporiopsis subvermispora
B]
Length = 460
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 193 KVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNAN---DIRNEDHVFSPGSLERLEA 249
K+C + G+C HG++C Y H P P S + SP+A I N+ GS ++
Sbjct: 11 KLCRNYALGYCPHGSDCNYIHASP-PTSIIPLSSPSAQFTMTIPNQ------GS----QS 59
Query: 250 EITELLKQRRGFPISIASLPMM----YYEKYGK 278
I L+ +P + PMM +E+Y K
Sbjct: 60 AIPSLMNAANMWPAAFGVDPMMGPNTAFEEYTK 92
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 150 TEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 208
Query: 418 LVK 420
+K
Sbjct: 209 EIK 211
>gi|444706633|gb|ELW47959.1| Heterogeneous nuclear ribonucleoprotein A/B [Tupaia chinensis]
Length = 219
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 57 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 115
Query: 418 LVK 420
+K
Sbjct: 116 EIK 118
>gi|190358560|ref|NP_001121808.1| makorin, ring finger protein, 4 [Danio rerio]
Length = 397
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 185 PSLPEFPVKVCHYFNKGFCKHGNNCRYFH 213
PS+P F V+ C YF KG C G+ CRY H
Sbjct: 39 PSVPSFQVQ-CRYFQKGGCWFGDRCRYLH 66
>gi|307169437|gb|EFN62136.1| MKI67 FHA domain-interacting nucleolar phosphoprotein-like
[Camponotus floridanus]
Length = 138
Score = 38.9 bits (89), Expect = 7.1, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 27/135 (20%)
Query: 366 VSNYFSKFGPVQDVRIPCQQK----RMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 421
+ +YF +FG V +R+ ++ R +G++ F+ E K N + +CG
Sbjct: 1 MKDYFKQFGKVTRIRVARSKRTGKSRGYGYIEFLHPEVAKVAAESMNNYLMCG------- 53
Query: 422 YREKSRLVDRKYV--EKMQHPMFCSLHFTDGDTELHTMPRACNNSRLL----RKQLMEEH 475
RL+ Y+ EK F L++T+ +T P+ N +++ R Q E +
Sbjct: 54 -----RLLKATYIPPEKQHFGFFMGLNWTE-----NTYPKLENRRKMVLRKNRDQSTENY 103
Query: 476 EQAIELERRRLSEMQ 490
+ IE +LS ++
Sbjct: 104 KSYIEKSLNKLSTLE 118
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 186 TEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEK-KFHNVSGSKC 244
Query: 418 LVK 420
+K
Sbjct: 245 EIK 247
>gi|244790069|ref|NP_001156444.1| TAR DNA binding protein-like [Acyrthosiphon pisum]
gi|239792762|dbj|BAH72685.1| ACYPI004992 [Acyrthosiphon pisum]
Length = 333
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
+E D+S YFS++G + DV IP + R FGFVTF A +V Q L + H V G + +
Sbjct: 201 ISEPDLSKYFSQYGEITDVFIP-KPFRAFGFVTFNDA-SVAQSLCDED-HIVKGVSLHIS 257
Query: 421 PYREKSRLVDRKYVEKMQHPM 441
KS K V Q M
Sbjct: 258 EANPKSDQNRDKQVSNQQQYM 278
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 95 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 153
Query: 418 LVK 420
+K
Sbjct: 154 EIK 156
>gi|294877864|ref|XP_002768165.1| hypothetical protein Pmar_PMAR002953 [Perkinsus marinus ATCC 50983]
gi|239870362|gb|EER00883.1| hypothetical protein Pmar_PMAR002953 [Perkinsus marinus ATCC 50983]
Length = 585
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRIPCQQ----KRMFGFVTFVFAETVKQILAKGNPHFVCG 414
S Q + NYFS+FGP+++ + + R FGF+TFV + ++ L+ N H +
Sbjct: 178 SLVDRQTLWNYFSQFGPLEESVVMMDKLTGRSRGFGFITFVNVKDLESCLSYPNSHILLD 237
Query: 415 ARVLVK 420
V VK
Sbjct: 238 KTVDVK 243
>gi|115470413|ref|NP_001058805.1| Os07g0124600 [Oryza sativa Japonica Group]
gi|28201305|dbj|BAC56813.1| putative Heterogeneous nuclear ribonucleoprotein [Oryza sativa
Japonica Group]
gi|113610341|dbj|BAF20719.1| Os07g0124600 [Oryza sativa Japonica Group]
gi|125557092|gb|EAZ02628.1| hypothetical protein OsI_24740 [Oryza sativa Indica Group]
gi|125598981|gb|EAZ38557.1| hypothetical protein OsJ_22946 [Oryza sativa Japonica Group]
Length = 377
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 335 SGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFG 390
SG + G+ S+++++ TE++ YF FG V DV + + R FG
Sbjct: 130 SGTEDGGDGMNYASKKVFIG-GLRDNITEEEFKTYFESFGTVTDVVVIYDSMTNRSRGFG 188
Query: 391 FVTFVFAETVKQILAKGNPHFVCGARVLVK 420
FVTF E V++++ + H + G RV K
Sbjct: 189 FVTFDSEEAVRKVIEH-SFHDLKGTRVEAK 217
>gi|294947916|ref|XP_002785524.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239899503|gb|EER17320.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 224
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 190 FPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQI-----FSPNANDIRNEDHVFSPGSL 244
F K+C + +GFCK GN CRY H S S+I +SP A+D + PGS
Sbjct: 117 FRTKMCDFAKQGFCKLGNRCRYAH------SGSEIIQDVDYSPKADDSKKP---IQPGSA 167
Query: 245 E-RLEAEITELLKQRR 259
+ LE + + +RR
Sbjct: 168 DIGLEGKKMYAIHKRR 183
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 96 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 154
Query: 418 LVK 420
+K
Sbjct: 155 EIK 157
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 360 TFTEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGA 415
T TE+D+ FSKFGP+ ++ P ++ + F FVTF+F E + A+ + G
Sbjct: 415 TSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPEHAVRAYAEVDGQVFQGR 474
Query: 416 RVLVKP 421
+ V P
Sbjct: 475 MLHVLP 480
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF + VK++L K H V G++
Sbjct: 186 TEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEK-KFHNVSGSKC 244
Query: 418 LVK 420
+K
Sbjct: 245 EIK 247
>gi|9711035|dbj|BAB07796.1| no arches [Danio rerio]
Length = 190
Score = 38.9 bits (89), Expect = 7.9, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 188 PEFPVKVCHYFNKGFCKHGNNCRYFH 213
PE +K C ++++GFCKHG +CR+ H
Sbjct: 117 PESKIKDCPWYDRGFCKHGPDCRHRH 142
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 134 TEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 192
Query: 418 LVK 420
+K
Sbjct: 193 EIK 195
>gi|66801345|ref|XP_629598.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60462994|gb|EAL61190.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 687
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQK---RMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T D +NYFS+FG + + + ++ + FGF+ F E+V +I+ H + G RV
Sbjct: 205 ITSDDFNNYFSEFGEISEYNLLTEKNGTIKGFGFICFK-DESVNEIILNEQQHIILGKRV 263
Query: 418 LVK 420
++
Sbjct: 264 DIR 266
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE + YF FG ++ + +P ++R F F+TF + VK+IL K H V G++
Sbjct: 193 TEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILEK-KFHNVGGSKC 251
Query: 418 LVK 420
+K
Sbjct: 252 EIK 254
>gi|119604356|gb|EAW83950.1| makorin, ring finger protein, 1, isoform CRA_b [Homo sapiens]
Length = 258
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 194 VCHYFNKGFCKHGNNCRYFHGHPM 217
VC YF +G+C +G+ CRY H P+
Sbjct: 89 VCKYFQRGYCIYGDRCRYEHSKPL 112
>gi|195028318|ref|XP_001987023.1| GH20198 [Drosophila grimshawi]
gi|193903023|gb|EDW01890.1| GH20198 [Drosophila grimshawi]
Length = 545
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V
Sbjct: 203 INSDDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVS 259
Query: 421 ---PYREKSR 427
P E++R
Sbjct: 260 NAAPKAEQNR 269
>gi|50293013|ref|XP_448939.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528252|emb|CAG61909.1| unnamed protein product [Candida glabrata]
Length = 255
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 339 SDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQK----RMFGFVTF 394
SD GI+ R P F E+++S YFS+FG +++VR+ +K R +GFV F
Sbjct: 121 SDISGIIYVGR-----LP--KGFHERELSKYFSQFGDLKEVRLARNKKTGNSRHYGFVQF 173
Query: 395 VFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTEL 454
V + + N + + G + V+ + S+ +++ Y K + M
Sbjct: 174 VNTDDSRVAYDTMNNYLLMGHLLQVRLLPKGSK-IEKLYKYKQRAFM------------- 219
Query: 455 HTMPRACNNSRLLRKQLMEEHEQAIE 480
+ P+A +++ L+K E+H++ +E
Sbjct: 220 -SPPKAKKSAKELKKLAEEKHKERME 244
>gi|194885691|ref|XP_001976478.1| GG19989 [Drosophila erecta]
gi|190659665|gb|EDV56878.1| GG19989 [Drosophila erecta]
Length = 533
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V P
Sbjct: 207 DLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAAP 263
Query: 422 YREKSR 427
E++R
Sbjct: 264 KAEQNR 269
>gi|195489341|ref|XP_002092695.1| GE11522 [Drosophila yakuba]
gi|194178796|gb|EDW92407.1| GE11522 [Drosophila yakuba]
Length = 534
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V P
Sbjct: 207 DLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAAP 263
Query: 422 YREKSR 427
E++R
Sbjct: 264 KAEQNR 269
>gi|195122786|ref|XP_002005892.1| GI20724 [Drosophila mojavensis]
gi|193910960|gb|EDW09827.1| GI20724 [Drosophila mojavensis]
Length = 536
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V
Sbjct: 203 INSDDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVS 259
Query: 421 ---PYREKSR 427
P E++R
Sbjct: 260 NAAPKAEQNR 269
>gi|340924295|gb|EGS19198.1| multiple RNA-binding domain-containing protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 832
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 309 SIRLIDRPHGQHSVILAEDVP-------KYLEYSGEKSDPGGIVAGSRQIYLTFPAESTF 361
+++ + P G+++V+L D K E G D + +R+++L + +T
Sbjct: 263 ALKAEEHPPGENAVLLKPDKAGDASVKDKAAEQHGSMEDAIATINKTRRLFLRNLSYTT- 321
Query: 362 TEQDVSNYFSKFGPVQDVRIPC-QQKRMFGFVTFVF 396
TE D+ +FS+FG +++V +P Q R GF F
Sbjct: 322 TEDDLREHFSRFGALEEVNLPLDNQNRSKGFAMIRF 357
>gi|195347229|ref|XP_002040156.1| GM15502 [Drosophila sechellia]
gi|195586189|ref|XP_002082860.1| GD25005 [Drosophila simulans]
gi|194135505|gb|EDW57021.1| GM15502 [Drosophila sechellia]
gi|194194869|gb|EDX08445.1| GD25005 [Drosophila simulans]
Length = 531
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V P
Sbjct: 207 DLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAAP 263
Query: 422 YREKSR 427
E++R
Sbjct: 264 KAEQNR 269
>gi|90077042|dbj|BAE88201.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 38.5 bits (88), Expect = 9.2, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 362 TEQDVSNYFSKFGPVQDVRIP----CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
TE+ + YF +FG ++ + +P ++R F F+TF E VK++L K H + G++
Sbjct: 21 TEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK-KFHTISGSKC 79
Query: 418 LVKPYREKSRLVDRKY 433
+K + K ++Y
Sbjct: 80 EIKVAQPKEVYQQQQY 95
>gi|17137616|ref|NP_477400.1| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|19549788|ref|NP_599145.1| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|24762415|ref|NP_726373.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|281364145|ref|NP_001163280.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|281364147|ref|NP_001163281.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
gi|19528241|gb|AAL90235.1| GH09868p [Drosophila melanogaster]
gi|21626670|gb|AAF47079.2| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|21626671|gb|AAF47078.2| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|21626672|gb|AAM68274.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|63108407|gb|AAY33499.1| RH39704p [Drosophila melanogaster]
gi|220946666|gb|ACL85876.1| TBPH-PB [synthetic construct]
gi|220956308|gb|ACL90697.1| TBPH-PB [synthetic construct]
gi|272432674|gb|ACZ94552.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|272432675|gb|ACZ94553.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
Length = 531
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V P
Sbjct: 207 DLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAAP 263
Query: 422 YREKSR 427
E++R
Sbjct: 264 KAEQNR 269
>gi|84998348|ref|XP_953895.1| RNA-binding (SR) protein [Theileria annulata]
gi|65304893|emb|CAI73218.1| RNA-binding (SR) protein, putative [Theileria annulata]
Length = 303
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 362 TEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 417
T +D+ YFSK+G V I + R FGFVTF ++V +L K H + G
Sbjct: 40 TPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGFGFVTFADRDSVNTVLRK--VHKIDGVEA 97
Query: 418 LVK--PYREKSRLVDRKY 433
VK +EKS+++ +Y
Sbjct: 98 DVKLAVRKEKSKILAPQY 115
>gi|302785051|ref|XP_002974297.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
gi|302807955|ref|XP_002985671.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300146580|gb|EFJ13249.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300157895|gb|EFJ24519.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
Length = 187
Score = 38.5 bits (88), Expect = 9.2, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAK 406
ST TE++ YF +FG + D + Q+ R FGF+TF ++V+ +L K
Sbjct: 118 STVTEEEFRGYFEQFGTISDAVVMYDHTTQRPRGFGFITFDSEDSVEAVLMK 169
>gi|312075256|ref|XP_003140336.1| hypothetical protein LOAG_04751 [Loa loa]
gi|307764497|gb|EFO23731.1| hypothetical protein LOAG_04751 [Loa loa]
Length = 349
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 186 SLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQI-FSPNA 229
SL + K+C F G C++G+ CR+ H HP P+ ++ FS NA
Sbjct: 221 SLNNYRTKLCTNFKNGHCRYGDRCRFIH-HPTPDGVTKTKFSTNA 264
>gi|195382465|ref|XP_002049950.1| GJ21868 [Drosophila virilis]
gi|194144747|gb|EDW61143.1| GJ21868 [Drosophila virilis]
Length = 539
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 361 FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V
Sbjct: 203 INSDDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVS 259
Query: 421 ---PYREKSR 427
P E++R
Sbjct: 260 NAAPKAEQNR 269
>gi|3882096|dbj|BAA34421.1| TAR-binding protein [Drosophila melanogaster]
gi|3882126|dbj|BAA34428.1| TAR-binding protein [Drosophila melanogaster]
gi|3882128|dbj|BAA34429.1| TAR-binding protein [Drosophila melanogaster]
Length = 531
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK---P 421
D+ YFSKFG V DV IP + R F FVTF+ + + + G H + G V V P
Sbjct: 207 DLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAAP 263
Query: 422 YREKSR 427
E++R
Sbjct: 264 KAEQNR 269
>gi|110738919|dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGN 408
ST TE ++ ++F+K+G V + ++ + R FGFV F E V ++L+KGN
Sbjct: 118 STVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGN 171
>gi|30682550|ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis thaliana]
gi|20260060|gb|AAM13377.1| unknown protein [Arabidopsis thaliana]
gi|332641793|gb|AEE75314.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 231
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 359 STFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGN 408
ST TE ++ ++F+K+G V + ++ + R FGFV F E V ++L+KGN
Sbjct: 118 STVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGN 171
>gi|384248222|gb|EIE21707.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 128
Score = 38.5 bits (88), Expect = 9.8, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 349 RQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQIL 404
R++++ A T TE + YF +FG + + +I + R FGF+T+ E ++++
Sbjct: 57 RKLFVGGLAPET-TEDNFKEYFGQFGDITEAQIMQDHTSGRSRGFGFITYEDEEAIEKVF 115
Query: 405 AKGNPHFVCGARV 417
AKG H + G V
Sbjct: 116 AKGRMHELAGKNV 128
>gi|343455562|gb|AEM36348.1| At1g58470 [Arabidopsis thaliana]
Length = 360
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 272 YYEKYGKTLQAEGYLTESQRHGK-AGYSLTK------LLARLKNSIRLIDRPHGQHSVIL 324
Y+ +YG L+A + + + GK G+ + ++ L+++ ++ +P I
Sbjct: 25 YFSRYGAVLEA--VVAKEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIR 82
Query: 325 AEDV------PKYLEYSGEKSDPG-------GIVAGSRQIYLTFPAESTFTEQDVSNYFS 371
++ ++LE ++ + G G+ + S++I++ + +T TE++ +YF
Sbjct: 83 KHEIYHQPFSMQFLERKMQQMNGGLREMSSNGVASRSKKIFVGGLSSNT-TEEEFKSYFE 141
Query: 372 KFGPVQDVRI----PCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420
+FG DV + + R FGFVT+ ++V +++ + N H + RV VK
Sbjct: 142 RFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSV-EVVMQSNFHELSDKRVEVK 193
>gi|444320101|ref|XP_004180707.1| hypothetical protein TBLA_0E01280 [Tetrapisispora blattae CBS 6284]
gi|387513750|emb|CCH61188.1| hypothetical protein TBLA_0E01280 [Tetrapisispora blattae CBS 6284]
Length = 233
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 186 SLPEFPVKVCH-YFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDI 232
+L ++ +C +F G+C +G+NC++ H +S F PN N++
Sbjct: 108 TLMDYQPDICKDFFQNGYCGYGDNCKFLHTREKLNEYSNEFRPNKNEV 155
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,475,059,941
Number of Sequences: 23463169
Number of extensions: 411778657
Number of successful extensions: 1113865
Number of sequences better than 100.0: 696
Number of HSP's better than 100.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 500
Number of HSP's that attempted gapping in prelim test: 1112378
Number of HSP's gapped (non-prelim): 1410
length of query: 578
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 430
effective length of database: 8,886,646,355
effective search space: 3821257932650
effective search space used: 3821257932650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)