Query 008085
Match_columns 578
No_of_seqs 238 out of 1706
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 17:46:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 8E-101 3E-105 838.7 55.7 512 27-578 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.6E-96 5E-101 797.5 54.8 464 26-561 64-545 (580)
3 1zpu_A Iron transport multicop 100.0 3.1E-94 1.1E-98 780.8 48.9 462 28-561 1-482 (534)
4 3pxl_A Laccase; 4-copper prote 100.0 3.3E-94 1.1E-98 771.1 47.9 457 29-559 3-470 (499)
5 1v10_A Laccase; multicopper bl 100.0 1.9E-94 6.5E-99 781.8 45.9 476 25-578 19-508 (521)
6 3t6v_A Laccase; beta barrel, o 100.0 5.6E-94 1.9E-98 769.5 45.4 456 30-560 5-471 (495)
7 2q9o_A Laccase-1; multicopper 100.0 3.2E-92 1.1E-96 769.9 48.3 472 25-562 29-523 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.1E-91 3.9E-96 757.6 43.1 468 30-578 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 3.5E-84 1.2E-88 688.8 40.0 405 25-559 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.9E-84 6.5E-89 691.4 33.6 406 28-562 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 4.1E-82 1.4E-86 684.4 40.1 421 29-562 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 3.2E-81 1.1E-85 677.6 40.2 430 28-560 24-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 1.3E-80 4.4E-85 661.5 42.0 417 25-559 46-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 1.2E-79 4.2E-84 684.3 41.1 462 27-562 30-593 (612)
15 3aw5_A Multicopper oxidase; be 100.0 1.8E-80 6.2E-85 659.6 30.6 395 29-559 20-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 1E-78 3.5E-83 646.4 36.9 430 27-558 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.4E-77 1.2E-81 650.2 41.4 462 27-562 30-593 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1.3E-53 4.6E-58 433.2 31.7 271 28-315 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 2.3E-52 7.9E-57 485.4 40.2 270 23-315 15-358 (1065)
20 2zwn_A Two-domain type laccase 100.0 3.8E-52 1.3E-56 427.3 33.8 271 28-315 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 1.4E-54 4.8E-59 484.5 14.1 238 33-294 50-315 (742)
22 2dv6_A Nitrite reductase; elec 100.0 1.7E-50 5.7E-55 432.4 21.3 402 25-563 24-436 (447)
23 1kbv_A ANIA, major outer membr 100.0 1.1E-48 3.8E-53 399.5 28.3 262 25-315 34-309 (327)
24 3gdc_A Multicopper oxidase; be 100.0 4.2E-48 1.5E-52 388.2 29.5 236 26-293 31-273 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 8.5E-47 2.9E-51 438.7 21.7 389 46-562 616-1060(1065)
26 3cg8_A Laccase; oxidoreductase 100.0 1.4E-45 4.8E-50 377.9 25.2 133 26-169 45-197 (343)
27 2zoo_A Probable nitrite reduct 100.0 3.5E-45 1.2E-49 390.3 29.1 269 23-315 22-299 (442)
28 3kw8_A Laccase, putative coppe 100.0 1.2E-44 3.9E-49 361.0 23.5 239 24-313 2-265 (276)
29 3tas_A Small laccase, multi-co 100.0 1.2E-44 4E-49 367.2 23.0 244 21-313 5-271 (313)
30 1mzy_A Copper-containing nitri 100.0 9.2E-44 3.1E-48 364.9 29.4 272 23-315 26-320 (333)
31 3t9w_A Small laccase, multi-co 100.0 6.3E-44 2.2E-48 359.0 23.0 242 24-313 24-287 (299)
32 1oe1_A Dissimilatory copper-co 100.0 3.5E-43 1.2E-47 361.3 26.1 269 25-315 28-320 (336)
33 2bw4_A Copper-containing nitri 100.0 2E-42 7E-47 356.1 26.2 270 24-315 33-326 (340)
34 1sdd_B Coagulation factor V; c 100.0 1.8E-40 6.3E-45 369.4 26.2 248 26-293 3-312 (647)
35 1sdd_A Coagulation factor V; c 100.0 1.8E-41 6.3E-46 342.9 10.3 213 49-293 50-285 (306)
36 2dv6_A Nitrite reductase; elec 100.0 1.4E-38 4.8E-43 340.0 31.0 259 27-315 161-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 4.6E-40 1.6E-44 367.9 10.5 247 26-292 130-440 (770)
38 2r7e_A Coagulation factor VIII 100.0 6E-37 2.1E-41 342.3 4.9 217 56-294 448-697 (742)
39 3gdc_A Multicopper oxidase; be 100.0 6.2E-29 2.1E-33 248.9 16.5 235 192-560 54-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 4E-28 1.4E-32 246.0 14.5 248 193-562 23-278 (318)
41 2zwn_A Two-domain type laccase 100.0 6.4E-28 2.2E-32 247.2 16.1 247 192-561 23-278 (339)
42 3kw8_A Laccase, putative coppe 99.9 5.9E-27 2E-31 233.1 16.7 220 211-562 34-267 (276)
43 3t9w_A Small laccase, multi-co 99.9 6.6E-27 2.2E-31 235.0 16.8 220 211-562 56-289 (299)
44 3tas_A Small laccase, multi-co 99.9 8E-26 2.7E-30 228.9 19.2 220 211-562 40-273 (313)
45 1sdd_A Coagulation factor V; c 99.9 2.6E-24 8.8E-29 217.3 1.6 239 195-561 52-301 (306)
46 1sdd_B Coagulation factor V; c 99.9 8.2E-22 2.8E-26 219.2 17.3 250 211-560 67-327 (647)
47 2bw4_A Copper-containing nitri 99.9 1.4E-20 4.7E-25 193.3 21.6 94 454-563 231-327 (340)
48 1kbv_A ANIA, major outer membr 99.9 3.5E-21 1.2E-25 196.1 16.2 249 193-562 59-309 (327)
49 1mzy_A Copper-containing nitri 99.8 2.3E-19 7.9E-24 183.5 20.4 92 455-562 226-320 (333)
50 2r7e_B Coagulation factor VIII 99.8 9.6E-22 3.3E-26 220.0 2.6 87 455-559 369-455 (770)
51 1oe1_A Dissimilatory copper-co 99.8 7.1E-18 2.4E-22 172.8 22.2 107 454-576 225-335 (336)
52 2zoo_A Probable nitrite reduct 99.8 3.6E-18 1.2E-22 181.6 14.8 249 193-562 49-299 (442)
53 2uxt_A Protein SUFI, SUFI; oxi 99.7 2.8E-16 9.5E-21 166.8 22.8 236 29-293 152-426 (451)
54 2xu9_A Laccase; oxidoreductase 99.7 1.5E-15 5E-20 161.0 23.8 232 28-292 145-424 (439)
55 1hfu_A Laccase 1; oxidoreducta 99.6 6.2E-14 2.1E-18 150.9 24.7 256 31-292 143-454 (503)
56 1v10_A Laccase; multicopper bl 99.6 5.6E-14 1.9E-18 151.8 24.0 236 48-292 191-475 (521)
57 3cvb_A Plastocyanin; cupredoxi 99.6 5.5E-16 1.9E-20 130.6 4.6 90 55-148 14-105 (105)
58 3zx1_A Oxidoreductase, putativ 99.6 2.2E-13 7.6E-18 144.7 21.6 242 30-293 181-466 (481)
59 3t6v_A Laccase; beta barrel, o 99.5 6.7E-13 2.3E-17 141.9 23.0 241 47-292 167-455 (495)
60 1zpu_A Iron transport multicop 99.5 2.2E-12 7.4E-17 139.6 24.2 223 48-292 167-465 (534)
61 1aoz_A Ascorbate oxidase; oxid 99.5 1.4E-12 5E-17 141.9 22.2 211 61-292 205-509 (552)
62 3pxl_A Laccase; 4-copper prote 99.5 2.7E-12 9.1E-17 137.3 23.3 241 47-292 165-455 (499)
63 1iby_A Nitrosocyanin; RED copp 99.5 2.2E-13 7.6E-18 115.9 11.8 105 30-148 2-112 (112)
64 3od3_A Blue copper oxidase CUE 99.5 1.7E-12 5.9E-17 137.8 21.3 252 30-293 151-475 (488)
65 2q9o_A Laccase-1; multicopper 99.5 8.7E-12 3E-16 135.7 25.7 241 47-292 194-505 (559)
66 2g23_A PHS, phenoxazinone synt 99.5 1.1E-11 3.6E-16 135.2 25.7 229 48-293 254-576 (612)
67 3aw5_A Multicopper oxidase; be 99.4 2.3E-12 7.8E-17 136.5 18.9 228 30-292 138-433 (448)
68 2cal_A Rusticyanin; iron respi 99.4 1.1E-12 3.8E-17 117.6 10.1 98 45-147 47-154 (154)
69 3abg_A Bilirubin oxidase; clea 99.3 1.4E-11 4.9E-16 132.9 17.1 244 30-293 172-460 (534)
70 2wsd_A Spore coat protein A; o 99.3 2.1E-11 7.1E-16 131.5 17.2 218 47-293 229-495 (513)
71 3cg8_A Laccase; oxidoreductase 99.3 5.8E-12 2E-16 128.6 11.7 101 51-153 198-311 (343)
72 1fwx_A Nitrous oxide reductase 99.3 3.5E-12 1.2E-16 136.9 10.0 96 44-150 497-594 (595)
73 2ov0_A Amicyanin; beta-sandwic 99.2 1.9E-11 6.6E-16 102.4 8.8 79 54-147 27-105 (105)
74 3sqr_A Laccase; multicopper ox 99.2 1.8E-09 6.2E-14 116.9 24.9 237 48-292 225-528 (580)
75 2aan_A Auracyanin A; cupredoxi 99.2 4.4E-11 1.5E-15 105.7 7.7 95 454-559 35-139 (139)
76 3cvb_A Plastocyanin; cupredoxi 99.1 2.3E-10 7.9E-15 95.8 8.4 86 454-560 19-105 (105)
77 3gyr_A PHS, phenoxazinone synt 99.1 6.9E-09 2.4E-13 114.7 21.7 232 47-293 253-576 (612)
78 2gim_A Plastocyanin; beta shee 99.0 5.3E-10 1.8E-14 93.8 8.4 84 59-148 19-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 4.4E-09 1.5E-13 92.7 10.3 91 56-147 31-139 (139)
80 1qhq_A Protein (auracyanin); e 98.8 2.4E-08 8.1E-13 88.1 11.5 91 57-148 30-140 (140)
81 2gim_A Plastocyanin; beta shee 98.8 1.2E-08 4E-13 85.5 8.4 85 454-559 20-105 (106)
82 4hci_A Cupredoxin 1; structura 98.8 1.5E-08 5.3E-13 83.8 9.0 79 54-147 22-100 (100)
83 1qhq_A Protein (auracyanin); e 98.7 2.7E-08 9.1E-13 87.8 9.2 99 454-559 33-139 (140)
84 2plt_A Plastocyanin; electron 98.7 3.9E-08 1.3E-12 81.0 7.8 80 60-147 18-98 (98)
85 3c75_A Amicyanin; copper prote 98.6 6.5E-08 2.2E-12 84.2 8.5 77 56-147 56-132 (132)
86 1pcs_A Plastocyanin; electron 98.6 7.4E-08 2.5E-12 79.3 7.9 81 59-147 18-98 (98)
87 1bxv_A Plastocyanin; copper pr 98.6 9.7E-08 3.3E-12 77.3 7.8 74 59-147 18-91 (91)
88 1b3i_A PETE protein, protein ( 98.6 1.8E-07 6.2E-12 76.7 8.8 79 60-147 19-97 (97)
89 1pcs_A Plastocyanin; electron 98.5 2.4E-07 8.4E-12 76.1 8.7 78 455-559 20-98 (98)
90 1kdj_A Plastocyanin; electron 98.5 2.1E-07 7.2E-12 77.1 7.7 83 59-147 16-102 (102)
91 3tu6_A Pseudoazurin (blue copp 98.5 2.1E-07 7.1E-12 80.0 7.4 76 60-150 23-98 (127)
92 2plt_A Plastocyanin; electron 98.5 3.5E-07 1.2E-11 75.2 8.5 80 455-559 19-98 (98)
93 1bxv_A Plastocyanin; copper pr 98.5 3.9E-07 1.3E-11 73.7 8.2 72 455-559 20-91 (91)
94 3erx_A Pseudoazurin; copper pr 98.5 4.8E-07 1.6E-11 77.3 8.6 75 60-149 21-95 (123)
95 1plc_A Plastocyanin; electron 98.4 5.5E-07 1.9E-11 74.1 8.3 77 60-147 17-99 (99)
96 1byp_A Protein (plastocyanin); 98.4 6.8E-07 2.3E-11 73.6 8.8 77 60-147 17-99 (99)
97 1b3i_A PETE protein, protein ( 98.4 1.4E-07 4.6E-12 77.5 3.9 78 455-559 20-97 (97)
98 3ef4_A Pseudoazurin, blue copp 98.4 5.7E-07 2E-11 76.7 7.6 75 60-149 22-96 (124)
99 1iby_A Nitrosocyanin; RED copp 98.4 1.3E-06 4.5E-11 73.6 9.1 75 454-560 38-112 (112)
100 4hci_A Cupredoxin 1; structura 98.3 1.7E-06 5.7E-11 71.4 8.9 72 455-559 29-100 (100)
101 1cuo_A Protein (azurin ISO-2); 98.3 1.3E-06 4.5E-11 75.2 8.5 93 56-148 14-129 (129)
102 1id2_A Amicyanin; beta barrel, 98.3 2.7E-06 9.4E-11 70.8 10.0 77 56-147 30-106 (106)
103 1byp_A Protein (plastocyanin); 98.3 1.7E-06 5.8E-11 71.1 8.6 82 455-559 18-99 (99)
104 1iuz_A Plastocyanin; electron 98.2 1.8E-06 6E-11 70.9 6.9 78 59-147 17-98 (98)
105 3ay2_A Lipid modified azurin p 98.2 4.7E-06 1.6E-10 74.7 10.1 93 56-148 54-167 (167)
106 1kdj_A Plastocyanin; electron 98.2 2.1E-06 7.3E-11 70.9 7.2 85 454-559 17-102 (102)
107 1paz_A Pseudoazurin precursor; 98.2 3.9E-06 1.3E-10 71.7 8.7 75 60-149 21-95 (123)
108 1pmy_A Pseudoazurin; electron 98.2 4.2E-06 1.4E-10 71.5 7.7 75 60-149 21-95 (123)
109 3sbq_A Nitrous-oxide reductase 98.1 9E-06 3.1E-10 85.6 11.2 91 48-149 546-638 (638)
110 2iaa_C Azurin; quinoprotein, t 98.1 2E-05 7E-10 67.6 10.4 92 56-148 13-128 (128)
111 2ccw_A Azurin II, AZN-2; elect 98.1 7E-06 2.4E-10 70.7 7.2 93 56-148 14-129 (129)
112 1plc_A Plastocyanin; electron 98.0 7.3E-06 2.5E-10 67.3 6.8 83 454-559 17-99 (99)
113 2ux6_A Pseudoazurin; type-1 co 98.0 1.3E-05 4.3E-10 68.5 8.1 73 60-149 21-93 (122)
114 1nwp_A Azurin; electron transp 98.0 2.4E-05 8.3E-10 67.1 9.9 91 56-147 14-128 (128)
115 1fwx_A Nitrous oxide reductase 97.9 2.7E-05 9.4E-10 83.7 10.7 79 453-561 512-593 (595)
116 2cal_A Rusticyanin; iron respi 97.9 2.2E-05 7.6E-10 69.9 8.3 89 454-559 61-154 (154)
117 2ov0_A Amicyanin; beta-sandwic 97.7 0.00012 4.2E-09 60.6 8.8 73 454-559 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.3 0.0013 4.5E-08 55.5 10.1 89 56-147 14-125 (125)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00069 2.4E-08 57.9 7.6 76 454-562 23-98 (127)
120 3erx_A Pseudoazurin; copper pr 97.2 0.0014 4.9E-08 55.6 9.0 73 455-560 22-94 (123)
121 3ef4_A Pseudoazurin, blue copp 97.2 0.0011 3.8E-08 56.3 8.2 75 455-562 23-97 (124)
122 2cua_A Protein (CUA); CUA cent 96.9 0.0043 1.5E-07 53.5 9.5 74 60-148 60-135 (135)
123 1iuz_A Plastocyanin; electron 96.9 0.0038 1.3E-07 50.7 8.5 81 454-559 18-98 (98)
124 1id2_A Amicyanin; beta barrel, 96.8 0.0052 1.8E-07 50.7 8.8 73 454-559 34-106 (106)
125 1paz_A Pseudoazurin precursor; 96.6 0.0076 2.6E-07 51.1 8.8 75 454-561 21-95 (123)
126 3c75_A Amicyanin; copper prote 96.6 0.0078 2.7E-07 51.8 8.9 73 454-559 60-132 (132)
127 3s8f_B Cytochrome C oxidase su 96.6 0.01 3.4E-07 53.1 9.7 74 60-148 93-168 (168)
128 3sbq_A Nitrous-oxide reductase 96.6 0.009 3.1E-07 63.1 10.6 79 454-560 558-637 (638)
129 1pmy_A Pseudoazurin; electron 96.5 0.0078 2.7E-07 51.1 8.1 75 454-561 21-95 (123)
130 3ay2_A Lipid modified azurin p 96.2 0.01 3.4E-07 53.0 7.0 95 455-559 59-166 (167)
131 2cua_A Protein (CUA); CUA cent 96.0 0.032 1.1E-06 48.0 9.2 70 456-559 62-134 (135)
132 1cuo_A Protein (azurin ISO-2); 96.0 0.056 1.9E-06 46.1 10.5 96 454-559 18-128 (129)
133 2ux6_A Pseudoazurin; type-1 co 95.8 0.029 9.8E-07 47.4 8.1 73 454-561 21-93 (122)
134 2ccw_A Azurin II, AZN-2; elect 95.0 0.18 6.3E-06 42.8 10.4 96 454-559 18-128 (129)
135 2iaa_C Azurin; quinoprotein, t 94.3 0.16 5.6E-06 43.1 8.5 45 514-559 80-127 (128)
136 3fsa_A Azurin; copper, cupredo 94.1 0.32 1.1E-05 40.9 9.6 98 453-559 17-125 (125)
137 1nwp_A Azurin; electron transp 93.9 0.32 1.1E-05 41.3 9.3 97 454-559 18-128 (128)
138 3s8f_B Cytochrome C oxidase su 93.9 0.28 9.6E-06 43.6 9.3 72 456-559 95-167 (168)
139 3isy_A Bsupi, intracellular pr 85.3 6.2 0.00021 32.7 9.6 70 222-292 21-101 (120)
140 3isy_A Bsupi, intracellular pr 81.4 14 0.00048 30.5 10.2 71 52-133 26-101 (120)
141 1cyx_A CYOA; electron transpor 65.2 15 0.00051 33.4 7.0 63 213-296 41-103 (205)
142 1cyx_A CYOA; electron transpor 60.9 24 0.00084 32.0 7.6 73 455-559 42-115 (205)
143 3hb3_B Cytochrome C oxidase su 53.1 42 0.0014 32.5 8.2 76 454-561 189-265 (298)
144 2gsm_B Cytochrome C oxidase su 51.9 46 0.0016 31.5 8.3 75 60-149 171-247 (262)
145 2r39_A FIXG-related protein; s 48.0 42 0.0015 27.3 6.5 49 221-279 33-83 (118)
146 3hb3_B Cytochrome C oxidase su 48.0 58 0.002 31.5 8.4 76 60-150 189-266 (298)
147 2gsm_B Cytochrome C oxidase su 46.2 57 0.002 30.9 7.9 76 454-561 171-247 (262)
148 1xwv_A DER F II; beta sheets, 44.5 37 0.0012 28.3 5.6 70 51-121 16-93 (129)
149 2f1e_A Protein APAG; APAG prot 43.8 24 0.0008 29.5 4.2 48 71-119 34-87 (127)
150 1xvs_A Protein APAG; MCSG APC2 41.5 23 0.00078 29.6 3.8 48 71-119 33-86 (126)
151 1nep_A EPV20, BNPC2, epididyma 41.2 35 0.0012 28.4 5.1 69 52-121 19-95 (130)
152 1v54_B Cytochrome C oxidase po 41.2 63 0.0021 29.9 7.2 75 60-149 140-216 (227)
153 1xq4_A Protein APAG; all beta 35.8 33 0.0011 29.1 4.0 48 71-119 38-91 (139)
154 2xzz_A Protein-glutamine gamma 35.5 52 0.0018 26.2 4.9 52 69-126 23-78 (102)
155 1v54_B Cytochrome C oxidase po 34.1 93 0.0032 28.7 7.1 76 454-561 140-216 (227)
156 1tza_A APAG protein, SOR45; st 33.2 30 0.001 29.1 3.3 44 71-117 33-84 (134)
157 2c34_A ICP, inhibitor of cyste 29.4 1.4E+02 0.0046 24.3 6.6 21 59-79 14-34 (116)
158 1fft_B Ubiquinol oxidase; elec 29.3 68 0.0023 31.3 5.5 62 213-295 151-212 (315)
159 2x3c_A Toxic extracellular end 25.6 1.3E+02 0.0045 29.6 7.0 16 106-121 95-110 (343)
160 1x9u_A Umecyanin; cupredoxin, 24.9 71 0.0024 26.0 4.1 33 529-561 73-106 (116)
161 3kmh_A D-lyxose isomerase; cup 23.8 83 0.0029 29.1 4.6 55 60-127 129-189 (246)
162 1yew_A Particulate methane mon 23.6 1.3E+02 0.0046 29.6 6.3 78 32-124 250-337 (382)
163 2wtp_A ORF131 protein, CZCE; m 23.0 36 0.0012 28.4 1.8 17 215-231 73-89 (131)
164 2p9r_A Alpha-2-M, alpha-2-macr 22.8 1.8E+02 0.0062 22.4 6.2 68 217-292 13-84 (102)
165 3kmh_A D-lyxose isomerase; cup 22.5 1.6E+02 0.0056 27.2 6.3 51 213-273 129-184 (246)
166 1fft_B Ubiquinol oxidase; elec 21.3 71 0.0024 31.1 3.9 73 455-559 152-225 (315)
167 1jer_A Cucumber stellacyanin; 21.2 1.1E+02 0.0037 25.8 4.6 70 63-151 31-111 (138)
168 1x9u_A Umecyanin; cupredoxin, 20.6 89 0.0031 25.4 3.8 34 116-150 72-107 (116)
169 2cio_B Inhibitor of cysteine p 20.4 2.5E+02 0.0086 22.8 6.6 20 59-78 12-31 (121)
170 1xvs_A Protein APAG; MCSG APC2 20.4 80 0.0027 26.2 3.5 50 222-274 31-84 (126)
171 2hj1_A Hypothetical protein; s 20.3 33 0.0011 27.1 1.1 24 49-72 59-82 (97)
172 2f1e_A Protein APAG; APAG prot 20.0 93 0.0032 25.8 3.9 49 222-273 32-84 (127)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=8.2e-101 Score=838.71 Aligned_cols=512 Identities=29% Similarity=0.548 Sum_probs=408.5
Q ss_pred CceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCCCccc
Q 008085 27 SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYITQ 105 (578)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~~tq 105 (578)
+++|+|+|+|++..+.+||..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHHHHHhhc
Q 008085 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQ 184 (578)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 184 (578)
|+|+||++|+|+|++ +++||||||||...|. +||+|+|||++++....+++ .|+|++|+++||++....+++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 8999999999998887 89999999999875544543 46899999999999988776654332
Q ss_pred CC-CCCCCCceEEEcCCCCCCCCC-------------CCC-----cceeEEEecCcEEEEEEEecCCCCeEEEEEcCceE
Q 008085 185 TG-AGPNVSDAYTINGLPGPLYNC-------------SAK-----DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSV 245 (578)
Q Consensus 185 ~g-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~ 245 (578)
.. .....++.++|||+.. ++| +.. ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112468999999974 333 211 12389999999999999999999999999999999
Q ss_pred EEEEeCCCCCCceEEeEEEECCCceEEEEEEe-CCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccc
Q 008085 246 TVVDVDAIYIKSFQTDILLITPGQTTNILLKA-KPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVS 324 (578)
Q Consensus 246 ~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~ 324 (578)
+|||+||.+++|+.+++|.|+|||||||+|++ ++++ |+|+|++.... +. .+.....|+|+|.++.. .
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~--g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~-------~ 304 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPS--ENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSV-------S 304 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTT--CCEEEEEEEES-SC--CCSCCEEEEEEETTSCT-------T
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCC--CCEEEEEEccc-CC--CCCccEEEEEEECCCCC-------C
Confidence 99999999999999999999999999999999 4545 89999998653 21 23457889999987552 0
Q ss_pred cCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecce
Q 008085 325 IKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNF 404 (578)
Q Consensus 325 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~ 404 (578)
..+.... |..|.+.+...... ..++.+.... +...+..+++++.+.+.+... ...+.|+|||+
T Consensus 305 ~~p~~~~-p~~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-------------~~~~~w~iNg~ 367 (552)
T 1aoz_A 305 KLPTSPP-PQTPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-------------NGYVKWAINDV 367 (552)
T ss_dssp SCCSSCC-CCCCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-------------TTEEEEEETTE
T ss_pred CCCCCCC-CCCCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC-------------CCeEEEEECCC
Confidence 0001111 33444443322211 1233333222 333456678888887654321 23567999999
Q ss_pred eeeCCChhhhhhhhcCCCCccccCCCCCCce-eccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCC---CCCCC
Q 008085 405 SFILPSTALLQAHFFGQNGVYTTDFPSTPLI-KFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLG---AESHP 480 (578)
Q Consensus 405 ~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~---~~~HP 480 (578)
+|..|..|+|.+.+.+++|.+..+++..++. .|+... ...+...+.++.++.++.|++|||+|+|.+.+. ...||
T Consensus 368 s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP 446 (552)
T 1aoz_A 368 SLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT-PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHP 446 (552)
T ss_dssp EECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS-CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEE
T ss_pred ccCCCCCCHHHHHhhcCccccccCCCcccccccccccc-ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCC
Confidence 9999999999888877778777666543321 233221 111223456678899999999999999976432 46799
Q ss_pred eeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 008085 481 LHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 481 ~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
||||||+||||+++.|.|++ .+...+|+.+|+|||||.|++++|++|||+|||||.|+|||||+||++.|||++|.|.+
T Consensus 447 ~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~ 525 (552)
T 1aoz_A 447 WHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV 525 (552)
T ss_dssp EEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG
T ss_pred EEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc
Confidence 99999999999999899987 45667899999999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 008085 561 GNLPNQKLPPPPADLPKC 578 (578)
Q Consensus 561 ~~~~~~~~~~~p~~~~~c 578 (578)
++++++|+++|+|
T Consensus 526 -----~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 -----EKVGRIPTKALAC 538 (552)
T ss_dssp -----GGCCCCCHHHHSS
T ss_pred -----hhhccCCcchhhh
Confidence 2567789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.6e-96 Score=797.53 Aligned_cols=464 Identities=31% Similarity=0.517 Sum_probs=373.4
Q ss_pred cCceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCCCcc
Q 008085 26 ASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
.+++++|+|+|++..+.+||..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++..++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCCCCCCCCCCCce-eEEeeeecccchHHHHHHh
Q 008085 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEV-PIIFGEWFNADTEAIINQS 182 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 182 (578)
||+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++.+. .+|.|. +|+++||++....+++...
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 7999999999999888 799999999988653 247787 9999999999988877665
Q ss_pred hcCCCCCCCCceEEEcCCCCCCCCCCC---------CcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCC
Q 008085 183 LQTGAGPNVSDAYTINGLPGPLYNCSA---------KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAI 253 (578)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~---------~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~ 253 (578)
...+ +..++.++|||+.. +.|+. ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~~--~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLGA--PPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTSC--CCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hccC--CCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 5432 45679999999964 44432 24689999999999999999999999999999999999999999
Q ss_pred CCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCC
Q 008085 254 YIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKP 333 (578)
Q Consensus 254 ~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p 333 (578)
+++|+.+++|.|+|||||||+|++++++ |+|||++.....|..........|+|+|.++.. .. |
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~--g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~----------~~----P 357 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAA--DNYWIRGNWGTTCSTNNEAANATGILRYDSSSI----------AN----P 357 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCS--SEEEEECCCCTTTSCBTTGGGCEEEEESSTTCC----------CC----C
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCC--CeEEEEEecccccCccCCCCceEEEEEECCCCC----------CC----C
Confidence 9999999999999999999999999886 999999987655432223346899999976542 01 1
Q ss_pred CCCCCCCcc-cccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeC-CCh
Q 008085 334 TLPALNDTA-FAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFIL-PST 411 (578)
Q Consensus 334 ~~p~~~~~~-~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~-p~~ 411 (578)
..+.+.... +.......|.++. +..+|...+..+.+.+. . +..+.|+|||.+|.. ++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~--~--------------~~~~~w~iN~~s~~~~~~~ 417 (580)
T 3sqr_A 358 TSVGTTPRGTCEDEPVASLVPHL----ALDVGGYSLVDEQVSSA--F--------------TNYFTWTINSSSLLLDWSS 417 (580)
T ss_dssp CCCCCCCCCCSCCSCGGGCCBSS----CCBCCSEEEEEEEEEEE--E--------------SSSEEEEETTBCCCCCTTS
T ss_pred CCCCCCccchhhcccccccccCC----CCCCCCccceEEEEEec--c--------------CCceeEEECCEecccCCCC
Confidence 111111111 1111112333332 22333334444444432 1 356789999999975 466
Q ss_pred hhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEe----cCCCEEEEEEecCCCCCCCCCCeeecCCc
Q 008085 412 ALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVL----PFNASVELVMQDTSTLGAESHPLHLHGFN 487 (578)
Q Consensus 412 ~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~i~N~~~~~~~~HP~HlHG~~ 487 (578)
|+|...+. | ..+++ ....++.+ +.|++|||+|+|.+.. ...||||||||+
T Consensus 418 P~L~~~~~---g--~~~~~--------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~ 471 (580)
T 3sqr_A 418 PTTLKIFN---N--ETIFP--------------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHD 471 (580)
T ss_dssp CHHHHHHT---T--CCCCC--------------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCC
T ss_pred Cchhhhhc---C--CccCC--------------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCce
Confidence 76655442 2 11221 11234444 4699999999997522 479999999999
Q ss_pred eEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 008085 488 FFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 488 F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
||||++|.|.|++..+...+|+.||++|||+.|++++|++|||++||||.|+|||||+||++.||+++|.+.+.
T Consensus 472 F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 472 FFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp EEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred EEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 99999999999987777889999999999999999999999999999999999999999999999999987543
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-94 Score=780.83 Aligned_cols=462 Identities=26% Similarity=0.422 Sum_probs=364.6
Q ss_pred ceEEEEEEEEEEEeecCc-eeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCCCccc
Q 008085 28 ITRHYKFDIKMQNVTRLC-HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYITQ 105 (578)
Q Consensus 28 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~~tq 105 (578)
++++|+|+|++..+++|| ..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++..++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999999899999999999
Q ss_pred cccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHHHHHhhc
Q 008085 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQ 184 (578)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 184 (578)
|+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++++ + + .+|+|++|+++||+++...++...+..
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p--~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-P--Y-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-C--S-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-C--C-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999966999999999999988 89999999999863 2 2 458899999999999988887665432
Q ss_pred C---CCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEe
Q 008085 185 T---GAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTD 261 (578)
Q Consensus 185 ~---g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 261 (578)
. .+....++.+||||+.. +.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12334679999999964 7899999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCC---CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCC-
Q 008085 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG---TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPA- 337 (578)
Q Consensus 262 ~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~- 337 (578)
+|.|+|||||||+|++++.+ +++|+|++.....+.. ........++|+|.++...| .+... ...+.
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~-~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p--------~~~~~-~~~~~~ 296 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDT-DKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP--------TQNYV-DSIDNF 296 (534)
T ss_dssp CEEECTTCEEEEEEECCSCS-SCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC--------CCCCC-SCSSCS
T ss_pred eEEECccceEEEEEEcCCCC-CCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC--------CCCcc-cccccc
Confidence 99999999999999998753 2789999875433211 12234678999998654200 00000 11111
Q ss_pred CCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhh
Q 008085 338 LNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAH 417 (578)
Q Consensus 338 ~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~ 417 (578)
..+ ..++++... ..+..+++++.+.+.+... .+ + ...|+|||++|..|+.|+|...
T Consensus 297 ~~~--------~~l~p~~~~----~~~~~~~~~~~l~~~~~~~----------~~-~-~~~~~iNg~s~~~~~~P~L~~~ 352 (534)
T 1zpu_A 297 LDD--------FYLQPYEKE----AIYGEPDHVITVDVVMDNL----------KN-G-VNYAFFNNITYTAPKVPTLMTV 352 (534)
T ss_dssp CCG--------GGCCBSSCC----CCCCSCSEEEEEEEEEEEC----------TT-S-CEEEEETTBCCCCCSSCHHHHH
T ss_pred ccc--------ccceeCCCC----CCCCCCCeEEEEEEEeecc----------CC-c-eeEEEECCCcccCCCCCceeee
Confidence 111 123333221 2234567887777654321 01 2 2358999999999988765543
Q ss_pred hcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCC-
Q 008085 418 FFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFG- 496 (578)
Q Consensus 418 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g- 496 (578)
+.. +.+ ... +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 353 ~~~--~~~----~~~-~~~------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~ 410 (534)
T 1zpu_A 353 LSS--GDQ----ANN-SEI------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTY 410 (534)
T ss_dssp TTS--GGG----TTC-GGG------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCC
T ss_pred ccc--Ccc----cCC-Ccc------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCc
Confidence 321 111 111 111 123467889999999999999965 479999999999999999864
Q ss_pred ---------CCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 008085 497 ---------NYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 497 ---------~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
.|++.. .. ....+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 411 ~~~~~G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 411 DDALGEVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp CGGGTCCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cccccCcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 344331 11 2256899999999999999999999999999999999999999999999987653
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=3.3e-94 Score=771.11 Aligned_cols=457 Identities=28% Similarity=0.515 Sum_probs=358.1
Q ss_pred eEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCC-----CeeEEeecccccCCcCCCCCCCc
Q 008085 29 TRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLLSGWADGPAYI 103 (578)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-----~~siH~HG~~~~~~~~~DG~~~~ 103 (578)
..+|+|+|++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+|++ +|+|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3689999999999999999999999999999999999999999999999984 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeecccchHHHHHH
Q 008085 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEAIINQ 181 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (578)
|||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||++.....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999878999999999999887 899999999987642 1223333567899999999876432
Q ss_pred hhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEe
Q 008085 182 SLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTD 261 (578)
Q Consensus 182 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 261 (578)
.+..+..++.++|||+.. +..+.....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 233445789999999953 3333444668999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCc
Q 008085 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDT 341 (578)
Q Consensus 262 ~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~ 341 (578)
+|.|+|||||||+|++++++ |+|+|++.....+. .+......|+|+|.++.. . .+.. +..+...
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~-------~---~p~~-~~~~~~~-- 298 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAV--DNYWIRANPNFGNV-GFDGGINSAILRYDGAPA-------V---EPTT-NQTTSVK-- 298 (499)
T ss_dssp BEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS-------S---CCCC-CCCCCSS--
T ss_pred eEEECCCcEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEeCCCCC-------C---CCCC-CCCCCCc--
Confidence 99999999999999999876 89999998643332 122234579999987542 0 1100 0001000
Q ss_pred ccccccccccccccCCCCCC-CCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcC
Q 008085 342 AFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFG 420 (578)
Q Consensus 342 ~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~ 420 (578)
.....+|+++.....|. ..+..+|+++.+.+.+. +. .|+|||++|..|+.|+|.+...
T Consensus 299 ---~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---------------~~--~w~iNg~s~~~~~~P~L~~~~~- 357 (499)
T 3pxl_A 299 ---PLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---------------GS--NFFINGASFVPPTVPVLLQILS- 357 (499)
T ss_dssp ---BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---------------SS--CEEETTBCCCCCSSCHHHHHHT-
T ss_pred ---ccccccccccccccCCCcccCCCCcEEEEEEEEec---------------Cc--EEEEcCEecCCCCCchhhhhhc-
Confidence 00112455553332221 12345677766554331 22 5899999999888876654332
Q ss_pred CCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCC
Q 008085 421 QNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDP 500 (578)
Q Consensus 421 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~ 500 (578)
|..... + ....+.++.++.|++|||+|+|.+....+.||||||||+||||+.+.
T Consensus 358 --g~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g----- 411 (499)
T 3pxl_A 358 --GAQTAQ--D-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG----- 411 (499)
T ss_dssp --TCCSTT--T-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-----
T ss_pred --CCcccc--c-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-----
Confidence 211100 0 11235688999999999999953323457899999999999998642
Q ss_pred CCCCCCCCCCCCCcceeeeecC---CcEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 008085 501 SKDRKNFNLIDPVERNTVGVPS---GGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 501 ~~~~~~~~~~~p~~rDTv~v~~---~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
...+|+.+|++|||+.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.
T Consensus 412 ---~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (499)
T 3pxl_A 412 ---STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470 (499)
T ss_dssp ---CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES
T ss_pred ---CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC
Confidence 3457889999999999987 9999999999999999999999999999999999644
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.9e-94 Score=781.78 Aligned_cols=476 Identities=28% Similarity=0.477 Sum_probs=364.1
Q ss_pred ccCceEEEEEEEEEEEeecCce-eeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-----CCeeEEeecccccCCcCCC
Q 008085 25 VASITRHYKFDIKMQNVTRLCH-TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-----NNISIHWHGIRQLLSGWAD 98 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-----~~~siH~HG~~~~~~~~~D 98 (578)
+.+...+|+|++++..+++||. .+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 3456788999999999999999 999999999999999999999999999999998 9999999999999889999
Q ss_pred CCCCccccccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeecccchH
Q 008085 99 GPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTE 176 (578)
Q Consensus 99 G~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~ 176 (578)
|+|++|||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||+++...
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~ 178 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLST 178 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHH
Confidence 999999999999999999999778999999999999888 799999999987532 222333347999999999998766
Q ss_pred HHHHHhhcCCCCCCCCceEEEcCCCCCCCCCC--CCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCC
Q 008085 177 AIINQSLQTGAGPNVSDAYTINGLPGPLYNCS--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIY 254 (578)
Q Consensus 177 ~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~ 254 (578)
++... .+.....++.++|||+.. +.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+
T Consensus 179 ~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 179 VLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp ----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred HHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 55321 112234579999999974 4453 2345899999999999999999999999999999999999999999
Q ss_pred CCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCC
Q 008085 255 IKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPT 334 (578)
Q Consensus 255 ~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~ 334 (578)
++|+.++++.|+|||||||+|++++++ |+|+|++.....+. .+......++|+|.+... . . |.
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~--g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~-------~---~----p~ 316 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAV--GNYWIRANPSNGRN-GFTGGINSAIFRYQGAAV-------A---E----PT 316 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTCCS-------C---C----CC
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCC--Cceeeeeccccccc-cCCCCceeEEEEECCCCC-------C---C----CC
Confidence 999999999999999999999999876 99999998653222 112223469999987552 0 0 11
Q ss_pred CCCCCCcccccccccccccccCCCCCC-CCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhh
Q 008085 335 LPALNDTAFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTAL 413 (578)
Q Consensus 335 ~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~l 413 (578)
.+.. +.... ...++.++.....+. ..+...+.++.+...+. +..+.|+|||++|..+..|+
T Consensus 317 ~~~~-~~~~~--~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~---------------~~~~~~~iNg~~~~~~~~P~ 378 (521)
T 1v10_A 317 TSQN-SGTAL--NEANLIPLINPGAPGNPVPGGADINLNLRIGRN---------------ATTADFTINGAPFIPPTVPV 378 (521)
T ss_dssp CCCC-CSCBC--CGGGCCBSSCCCCSSCSSTTCSSEEEECCEECC---------------SSSSCCEESSCCCCCCSSCH
T ss_pred CCCC-ccccc--chhhcccCCcccCCCcccCCcceEEEEEEEecC---------------CceeEEEECCCcccCCCCch
Confidence 1100 00000 012344443222221 11223444443332211 33346999999999887776
Q ss_pred hhhhhcCCCCccc-cCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEE
Q 008085 414 LQAHFFGQNGVYT-TDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIG 492 (578)
Q Consensus 414 l~~~~~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~ 492 (578)
|.+... |.+. .+ ...++.++.++.|++|||+++| . +.||||||||+||||+
T Consensus 379 l~~~~~---g~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~ 430 (521)
T 1v10_A 379 LLQILS---GVTNPND--------------------LLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVR 430 (521)
T ss_dssp HHHHHH---TCCCGGG--------------------SSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEE
T ss_pred hhhhhc---CCccccc--------------------CCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEe
Confidence 655432 1110 01 1234678899999999999999 2 7899999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCcceeeee-cCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCCCCCCCCCCC
Q 008085 493 QGFGNYDPSKDRKNFNLIDPVERNTVGV-PSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNGNLPNQKLPPP 571 (578)
Q Consensus 493 ~g~g~~~~~~~~~~~~~~~p~~rDTv~v-~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~ 571 (578)
++.+ ..+++.+|+|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.+.+ ..++.++
T Consensus 431 ~~~~--------~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~ 500 (521)
T 1v10_A 431 TPGS--------SVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAI 500 (521)
T ss_dssp CTTC--------SCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCC
T ss_pred cCCC--------CccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCC
Confidence 9754 2357889999999999 899999999999999999999999999999999999986543 2344444
Q ss_pred C-CCCCCC
Q 008085 572 P-ADLPKC 578 (578)
Q Consensus 572 p-~~~~~c 578 (578)
| ++.+.|
T Consensus 501 p~~~~~~C 508 (521)
T 1v10_A 501 SPAWDDLC 508 (521)
T ss_dssp CHHHHTHH
T ss_pred ChHHhhhc
Confidence 4 456777
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=5.6e-94 Score=769.52 Aligned_cols=456 Identities=27% Similarity=0.512 Sum_probs=356.1
Q ss_pred EEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCC-----CeeEEeecccccCCcCCCCCCCcc
Q 008085 30 RHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 30 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-----~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
..|+|+|++..+++||..+.+++|||++|||+|++++||+|+|+|+|+|++ +|+|||||+++..++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 689999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeecccchHHHHHHh
Q 008085 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (578)
||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 999999999999999878999999999999887 899999999987642 12233335678999999998765432
Q ss_pred hcCCCCCCCCceEEEcCCCCCCCCCC--CCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEE
Q 008085 183 LQTGAGPNVSDAYTINGLPGPLYNCS--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQT 260 (578)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 260 (578)
.+..+..++.++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 --~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 223445789999999953 2332 2356899999999999999999999999999999999999999999999999
Q ss_pred eEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCC
Q 008085 261 DILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALND 340 (578)
Q Consensus 261 ~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~ 340 (578)
++|.|+|||||||+|++++++ |+|+|++.....+. .+.+....|+|+|.++.. . .+.. + .+.. .
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~-------~---~p~~-~-~~~~-~ 300 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPV--GNYWIRANPNSGGE-GFDGGINSAILRYDGATT-------A---DPVT-V-ASTV-H 300 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS-------S---CCCC-C-CCSS-C
T ss_pred eeEEEcCceEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEECCCCC-------C---CCCC-C-CCCC-C
Confidence 999999999999999999887 89999998643332 122234579999986542 0 0100 0 0000 0
Q ss_pred cccccccccccccccCCCCCC-CCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhc
Q 008085 341 TAFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFF 419 (578)
Q Consensus 341 ~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~ 419 (578)
. ......+|+++.....|. ..+..+|+++.+.+.+. +. .|+|||++|..|+.|+|.+...
T Consensus 301 ~--~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---------------~~--~w~iNg~s~~~~~~P~L~~~~~ 361 (495)
T 3t6v_A 301 T--KCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA---------------CG--NFVINGVSFTPPTVPVLLQICS 361 (495)
T ss_dssp S--SBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE---------------TT--EEEETTBCCCCCSSCHHHHHHT
T ss_pred c--cccccccccccccccCCCccCCCCCcEEEEEEEEec---------------Cc--EEEEcCEecCCCCCcchhhhhc
Confidence 0 000112455543322221 12344676666554321 22 5899999999888876554332
Q ss_pred CCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCC
Q 008085 420 GQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYD 499 (578)
Q Consensus 420 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~ 499 (578)
|.+... + ......++.++.|++|||+|+|. ...+.||||||||+|+||+.+.
T Consensus 362 ---g~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g---- 413 (495)
T 3t6v_A 362 ---GANTAA--D-----------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS---- 413 (495)
T ss_dssp ---TCCSST--T-----------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT----
T ss_pred ---CCcCcc--c-----------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC----
Confidence 211100 0 11235688999999999999842 2357999999999999998642
Q ss_pred CCCCCCCCCCCCCCcceeeeecC-CcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 008085 500 PSKDRKNFNLIDPVERNTVGVPS-GGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 500 ~~~~~~~~~~~~p~~rDTv~v~~-~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
...+|+.+|+||||+.|++ |+|++|||++||||.|+|||||++|++.||+++|.+.+
T Consensus 414 ----~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 414 ----NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp ----CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred ----CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 3457889999999999997 89999999999999999999999999999999996543
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=3.2e-92 Score=769.89 Aligned_cols=472 Identities=25% Similarity=0.441 Sum_probs=361.5
Q ss_pred ccCceEEEEEEEEEEE--eecCcee-eEEEEEcCCCCCceEEEecCCEEEEEEEecC-CCCeeEEeecccccCCcCCCCC
Q 008085 25 VASITRHYKFDIKMQN--VTRLCHT-KSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLLSGWADGP 100 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l-~~~~siH~HG~~~~~~~~~DG~ 100 (578)
+.+++++|+|++++.. +.++|.. +.+|+|||++|||+|++++||+|+|+|+|+| +++|+|||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4567899999999998 8899998 9999999999999999999999999999999 6899999999999988999999
Q ss_pred CCccccccCC-CCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCCCCCCCCCCCce-eEEeeeecccchHH
Q 008085 101 AYITQCPIQT-GQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEV-PIIFGEWFNADTEA 177 (578)
Q Consensus 101 ~~~tq~~i~P-G~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 177 (578)
|++|||+|+| |++|+|+|++ .++||||||||...|. +||+|+|||++++.. .+|+|. +|+++||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999998887 899999999988653 237777 99999999998877
Q ss_pred HHHHhhcCCCCCCCCceEEEcCCCCCCCCCC-CCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCC
Q 008085 178 IINQSLQTGAGPNVSDAYTINGLPGPLYNCS-AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK 256 (578)
Q Consensus 178 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~-~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~ 256 (578)
++.... +..+..++.++|||+... .|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654332 223456799999999753 232 224578999999999999999999999999999999999999999999
Q ss_pred ceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecc--ccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCC
Q 008085 257 SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP--YATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPT 334 (578)
Q Consensus 257 P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~--~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~ 334 (578)
|+.++++.|+|||||||+|++++++ |+|+|++.. ...+. ........++|+|.++.. ..|.. +.
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~----------~~P~~-~~ 324 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAP--DNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPG----------GLPTD-EG 324 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCS--SEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCC----------SCCCC-CC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCC--CcEEEEEEeccccccC-CCCCCceeEEEEECCCCC----------CCCCC-CC
Confidence 9999999999999999999999876 899999986 32221 123345689999986542 00100 00
Q ss_pred CCCCCCcccccccccccccccCCCCCCC-CCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCC-Chh
Q 008085 335 LPALNDTAFAFNYTTRLRSLANAQFPAN-VPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILP-STA 412 (578)
Q Consensus 335 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p-~~~ 412 (578)
.+. .+..+... ..+.++.....+.. .....+..+.+..... . ...+.|+|||++|..+ ..|
T Consensus 325 ~~~-~~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~iNg~s~~~~~~~P 387 (559)
T 2q9o_A 325 TPP-VDHQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT-------------G-TPLFVWKVNGSDINVDWGKP 387 (559)
T ss_dssp CCC-CCCTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS-------------S-SSSCEEEETTBCCCCCTTSC
T ss_pred CcC-CCcccccc--cccccCCCCCCCCcccccceeEEEEEEeecC-------------C-CceEEEEECCEecccCCCCC
Confidence 010 00000000 12222211111110 1111233444433211 1 2356799999999765 456
Q ss_pred hhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecC-CCEEEEEEecCCC-CCCCCCCeeecCCceEE
Q 008085 413 LLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPF-NASVELVMQDTST-LGAESHPLHLHGFNFFV 490 (578)
Q Consensus 413 ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ve~~i~N~~~-~~~~~HP~HlHG~~F~V 490 (578)
+|...+.+. .+| ..+..++.++. +++++|+++|... ...+.||||||||+|||
T Consensus 388 ~L~~~~~g~-----~~~--------------------~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~V 442 (559)
T 2q9o_A 388 IIDYILTGN-----TSY--------------------PVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLV 442 (559)
T ss_dssp HHHHHHHTC-----CCC--------------------CGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEE
T ss_pred cHhHhhcCC-----ccC--------------------CCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEE
Confidence 655543221 111 11244566654 5777888888531 01478999999999999
Q ss_pred EEecC---------CCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 008085 491 IGQGF---------GNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 491 l~~g~---------g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
|+++. |.|++..+...+++.+|+|||||.|++++|++|||++||||.|||||||++|++.|||++|.|.+.
T Consensus 443 l~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 443 LGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp EEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred EecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 99987 777654444678899999999999999999999999999999999999999999999999988654
Q ss_pred C
Q 008085 562 N 562 (578)
Q Consensus 562 ~ 562 (578)
+
T Consensus 523 ~ 523 (559)
T 2q9o_A 523 D 523 (559)
T ss_dssp H
T ss_pred h
Confidence 3
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.1e-91 Score=757.56 Aligned_cols=468 Identities=30% Similarity=0.523 Sum_probs=359.8
Q ss_pred EEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-----CCeeEEeecccccCCcCCCCCCCcc
Q 008085 30 RHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-----NNISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 30 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-----~~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
..|+|++++..+++||..+.+|+|||++ ||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999998 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCC-CCCCCCCCCceeEEeeeecccchHHHHHHh
Q 008085 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (578)
||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999768999999999999888 799999999987532 222333347999999999998765431
Q ss_pred hcCCCCCCCCceEEEcCCCCCCCCCCC-CcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEe
Q 008085 183 LQTGAGPNVSDAYTINGLPGPLYNCSA-KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTD 261 (578)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 261 (578)
+ ...++.++|||+.. +.|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13579999999974 45542 3458999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCC---CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCC
Q 008085 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG---TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPAL 338 (578)
Q Consensus 262 ~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~ 338 (578)
+|.|+|||||||+|++++++ |+|+|++.....+.+ .+......++|+|.++.. . .+.. +..|..
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~-------~---~p~~-~~~~~~ 300 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPV--DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN-------A---DPTT-SANPNP 300 (503)
T ss_dssp BEEECTTCEEEEEEECCSCS--SEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCS-------S---CCCC-CCCSSC
T ss_pred eEEEcccceEEEEEEcCCCc--cceeeeeccccCCcccccccCCCceEEEEEECCCCC-------C---CCCC-CCCCcc
Confidence 99999999999999999876 899999986432211 122223479999987552 0 0100 111110
Q ss_pred CCcccccccccccccccCCCCCC-CCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhh
Q 008085 339 NDTAFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAH 417 (578)
Q Consensus 339 ~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~ 417 (578)
... . ..+++++.....+. ..+...+..+.+.... + +. .|+|||++|..+..|+|.+.
T Consensus 301 ~~l---~--~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~-~~--~~~iNg~~~~~~~~P~l~~~ 358 (503)
T 1hfu_A 301 AQL---N--EADLHALIDPAAPGIPTPGAADVNLRFQLGF--------------S-GG--RFTINGTAYESPSVPTLLQI 358 (503)
T ss_dssp CBC---C--GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------E-TT--EEEETTBCCCCCSSCHHHHH
T ss_pred CCC---c--cccccccCccCCCCcccCCcceEEEEEEeec--------------c-Cc--eEEECCCccCCCCCcchhhh
Confidence 000 0 12344443222221 1122334444332211 1 22 58999999998877766554
Q ss_pred hcCCCCccc-cCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCC
Q 008085 418 FFGQNGVYT-TDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFG 496 (578)
Q Consensus 418 ~~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g 496 (578)
.. |.+. .+ ...++.++.++.|++|||+++|.. ..+.||||||||+||||+++.+
T Consensus 359 ~~---g~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~ 413 (503)
T 1hfu_A 359 MS---GAQSAND--------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGS 413 (503)
T ss_dssp HT---TCCSGGG--------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTC
T ss_pred hc---CCccccc--------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCC
Confidence 32 2110 01 123467889999999999999543 2479999999999999999754
Q ss_pred CCCCCCCCCCCCCCCCCcceeeee-cCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCCCCCCCCCCCC-CC
Q 008085 497 NYDPSKDRKNFNLIDPVERNTVGV-PSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNGNLPNQKLPPPP-AD 574 (578)
Q Consensus 497 ~~~~~~~~~~~~~~~p~~rDTv~v-~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~ 574 (578)
..+++.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|.+.+ ..++.++| ++
T Consensus 414 --------~~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~ 483 (503)
T 1hfu_A 414 --------STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEW 483 (503)
T ss_dssp --------CCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHH
T ss_pred --------CccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHH
Confidence 2357789999999999 999999999999999999999999999999999999986543 23444444 44
Q ss_pred CCCC
Q 008085 575 LPKC 578 (578)
Q Consensus 575 ~~~c 578 (578)
.+.|
T Consensus 484 ~~~C 487 (503)
T 1hfu_A 484 AQLC 487 (503)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 5666
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.5e-84 Score=688.75 Aligned_cols=405 Identities=21% Similarity=0.329 Sum_probs=320.5
Q ss_pred ccCceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcc
Q 008085 25 VASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
+.+.+++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++ ++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc---
Confidence 456788999999999999999999999999999999999999999999999999999999999999876 699987
Q ss_pred ccccCCCCeEEEEEEEC-CCCcceEEecCccc----cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHH
Q 008085 105 QCPIQTGQSYVYNFTIS-GQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAI 178 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 178 (578)
+.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+.. +....++|++|+++||+++.....
T Consensus 87 -~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~ 164 (439)
T 2xu9_A 87 -LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPA 164 (439)
T ss_dssp -CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEEC
T ss_pred -ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcC
Confidence 5699999999999985 48999999999875 33 8999999999875421 111347899999999988753000
Q ss_pred --HHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC-
Q 008085 179 --INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI- 255 (578)
Q Consensus 179 --~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~- 255 (578)
.......| ..++.++|||+.. |.++|++| +|||||||+|+.+.+.|+|+||+|+||++||+++
T Consensus 165 ~~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~ 230 (439)
T 2xu9_A 165 PHTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLE 230 (439)
T ss_dssp CCCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred CCCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCC
Confidence 00000012 2458999999965 78999999 9999999999999999999999999999999997
Q ss_pred CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCC--------------CCCCcceEEEEEEecCCCCCCCc
Q 008085 256 KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG--------------TFDNSTVAGILEYEAPAKFPRSS 321 (578)
Q Consensus 256 ~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~p~~~ 321 (578)
+|+.++++.|+|||||||+|+++++ |+|+|++.....+.. ........++++|.+...
T Consensus 231 ~p~~~~~l~l~pgeR~dv~v~~~~~---G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 302 (439)
T 2xu9_A 231 EPLEVSELLLAPGERAEVLVRLRKE---GRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK----- 302 (439)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSS---EEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC-----
T ss_pred CceEeceEEECCceeEEEEEEcCCC---ceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc-----
Confidence 8999999999999999999999995 899999976433210 001234678888875431
Q ss_pred ccccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeee
Q 008085 322 TVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASV 401 (578)
Q Consensus 322 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 401 (578)
.. + .|... ..+..+ + .+ ..++++.+...+ . + ..|+|
T Consensus 303 ------~~---~-~p~~l---------~~~~~l-----~--~~-~~~r~~~l~~~~--~-------------g--~~~~i 338 (439)
T 2xu9_A 303 ------PL---P-LPKAL---------SPFPTL-----P--AP-VVTRRLVLTEDM--M-------------A--ARFFI 338 (439)
T ss_dssp ------CC---C-CCSCC---------CCCCCC-----C--CC-SEEEEEEEEEEG--G-------------G--TEEEE
T ss_pred ------cc---c-CcccC---------CCcccC-----C--CC-CcceEEEEEeec--c-------------C--ceEeE
Confidence 00 0 11100 001111 1 11 123666665543 0 1 24889
Q ss_pred cceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCe
Q 008085 402 NNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPL 481 (578)
Q Consensus 402 ng~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~ 481 (578)
||++|..+. ..+.++.|++|+|+|+|.+ .+.|||
T Consensus 339 Ng~~~~~~~-------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~ 372 (439)
T 2xu9_A 339 NGQVFDHRR-------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPF 372 (439)
T ss_dssp TTBCCCTTC-------------------------------------------CCEEECTTCEEEEEEEECS---SSCEEE
T ss_pred CCEECCCCC-------------------------------------------CceecCCCCEEEEEEEcCC---CCCCCc
Confidence 998874321 1246789999999999965 489999
Q ss_pred eecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 008085 482 HLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 482 HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
|||||+||||+++.+.+ .+|.|||||.|++++|++|||++||||.|+|||||++|||.|||++|+|.
T Consensus 373 HLHG~~F~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 373 HLHVHPFQVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EESSCCBEEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred eeCCCcEEEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999999999875432 37899999999999999999999999999999999999999999999883
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.9e-84 Score=691.41 Aligned_cols=406 Identities=16% Similarity=0.175 Sum_probs=318.0
Q ss_pred ceEEEEEEEEEEEeec-CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcccc
Q 008085 28 ITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (578)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~ 106 (578)
.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999987 99998 89
Q ss_pred ccCCCCeEEEEEEECCCCcceEEecCccc----cc-cceeeeEEEeCCCCCCCCCCC--CCCceeEEeeeecccchHHHH
Q 008085 107 PIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPFPK--PYKEVPIIFGEWFNADTEAII 179 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 179 (578)
+|+||++|+|+|++++++||||||||.++ |. +||+|+|||+++++...+++. .++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 99999999999998556999999999965 33 899999999998654333333 478999999999886543321
Q ss_pred HHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEE-cCceEEEEEeCCCCC-Cc
Q 008085 180 NQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI-ANHSVTVVDVDAIYI-KS 257 (578)
Q Consensus 180 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~P 257 (578)
+...+.....++.++|||+.+ |.++|++| +|||||||+|+.+.+.|+| +||+|+|||+||+++ +|
T Consensus 172 --~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 --YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp --CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred --cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 111222345679999999975 78999999 9999999999999999999 899999999999997 89
Q ss_pred eEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCC-------CCCCcceEEEEEEecCCCCCCCcccccCCCCC
Q 008085 258 FQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG-------TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPL 330 (578)
Q Consensus 258 ~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~ 330 (578)
+.++++.|+|||||||+|++++. +.|+|++.....+.+ ........++++|..... . .+.
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~-------~---~~~ 305 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSNG---DEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGL-------L---PLV 305 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTTC---CCEEEEC----------------CCCCSCCEEEEEEECSC-------C---C--
T ss_pred eEeceEEECceeEEEEEEEeCCC---CEEEEEecCccccccccccccccCCCCCCcceEEEEecCC-------C---cCc
Confidence 99999999999999999999974 899999876432211 011233467888875442 0 000
Q ss_pred CCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCC
Q 008085 331 MKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPS 410 (578)
Q Consensus 331 ~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~ 410 (578)
. ...|. .|.++... + .+...++++.+ . + .|+|||++|..+.
T Consensus 306 ~-~~~p~------------~L~~~~~~--~--~~~~~~~~~~l--~-----------------~---~~~iNg~~f~~~~ 346 (451)
T 2uxt_A 306 T-DSLPM------------RLLPTEIM--A--GSPIRSRDISL--G-----------------D---DPGINGQLWDVNR 346 (451)
T ss_dssp ---CCCS------------CSSSSCCC--C--CCCSEEEEEEE--C-----------------S---SSSBTTBCCCTTC
T ss_pred c-ccCcc------------ccCCCCCC--C--CCCcceEEEEE--e-----------------e---EEEECCEeCCCCC
Confidence 0 11111 12222111 1 12222333332 1 1 3889998874321
Q ss_pred hhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEE
Q 008085 411 TALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFV 490 (578)
Q Consensus 411 ~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~V 490 (578)
..+.++.|++|+|+|+|. +.||||||||+|||
T Consensus 347 -------------------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~V 378 (451)
T 2uxt_A 347 -------------------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQI 378 (451)
T ss_dssp -------------------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEE
T ss_pred -------------------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEE
Confidence 125678999999999995 58999999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCcee----EEEEeechhhhhccceEEEEEecCC
Q 008085 491 IGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGV----WFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 491 l~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~----w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
|+++. ..+++.+|.|||||.| +++++|+|++||||. |||||||++|||.|||++|+|.+.+
T Consensus 379 l~~~G---------~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 379 RNVNG---------AMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EEETT---------BCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EeeCC---------cCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99862 2345678999999999 999999999999988 9999999999999999999998754
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.1e-82 Score=684.43 Aligned_cols=421 Identities=19% Similarity=0.271 Sum_probs=319.3
Q ss_pred eEEEEEEEEEEE--eecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcccc
Q 008085 29 TRHYKFDIKMQN--VTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (578)
Q Consensus 29 ~~~~~l~~~~~~--~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~ 106 (578)
+++|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||++++.. +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 478999999654 567888899999999999999999999999999999999999999999998864 99985 79
Q ss_pred ccCCCCeEEEEEEECCCCcceEEecCccccc-----cceeeeEEEeCCCCCCCCCCC--CCCceeEEeeeecccchHHHH
Q 008085 107 PIQTGQSYVYNFTISGQRGTLFWHAHISWLR-----ATVYGPLVIFPKRGVPYPFPK--PYKEVPIIFGEWFNADTEAII 179 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 179 (578)
+|+||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+..++++. .+.|++|+++||+++...+++
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999866689999999998753 799999999998876555554 367899999999776543321
Q ss_pred HHhhcCC-CCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcC-------ceEEEEEeC
Q 008085 180 NQSLQTG-AGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN-------HSVTVVDVD 251 (578)
Q Consensus 180 ~~~~~~g-~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~g-------h~~~via~D 251 (578)
. ..+ .....++.++|||+.+ +.++|++ ++|||||||+|+.+.+.|+|++ |+|+|||+|
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred c---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 1 111 1234579999999976 6688888 5899999999999999999987 999999999
Q ss_pred CCC-CCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccC-CCC-CCCCcceEEEEEEecCCCCCCCcccccCCC
Q 008085 252 AIY-IKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT-GQG-TFDNSTVAGILEYEAPAKFPRSSTVSIKKL 328 (578)
Q Consensus 252 G~~-~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~p~~~~~~~~~~ 328 (578)
|++ .+|+.+++|.|+|||||||+|++++.+ |.+|+|++..... +.+ ........++++|..... + .. ..
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~-~-----~~-~~ 328 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYA-GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADD-T-----TQ-PD 328 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCT-TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCC-S-----SC-SC
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCC-CceEEEEeccccccccccccCcCCcceeEEEecCCC-C-----cC-CC
Confidence 986 489999999999999999999999864 2479999854211 111 111123468889875442 0 00 00
Q ss_pred CCCCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeC
Q 008085 329 PLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFIL 408 (578)
Q Consensus 329 ~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~ 408 (578)
. ...| ..++.+.. + ..+...++.+.+. .. + ..|+|||++|..
T Consensus 329 ~---~~~P------------~~L~~~~~---p-~~~~~~~~~~~~~--~~---------------~--~~w~iNG~~f~~ 370 (534)
T 3abg_A 329 T---SVVP------------ANLRDVPF---P-SPTTNTPRQFRFG--RT---------------G--PTWTINGVAFAD 370 (534)
T ss_dssp C---CCCC------------CCCCCCSC---C-CCCCCCCEEEECS--CC---------------C--STTCCCCBTTBC
T ss_pred C---CCCc------------cccccCCC---C-CCccccceEEEEe--cc---------------C--ceeEECCcccCC
Confidence 0 0011 11222211 1 0112234443321 10 1 248899988743
Q ss_pred CChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCce
Q 008085 409 PSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNF 488 (578)
Q Consensus 409 p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F 488 (578)
+.. |. ...++.|++|+|+|+|.+. .+.||||||||+|
T Consensus 371 ~~~----------------------p~-------------------l~~v~~G~~~~w~i~N~~~--~~~HP~HLHG~~F 407 (534)
T 3abg_A 371 VQN----------------------RL-------------------LANVPVGTVERWELINAGN--GWTHPIHIHLVDF 407 (534)
T ss_dssp TTS----------------------CC-------------------CCEECTTCEEEEEEEECSS--SCCCCEEESSCCE
T ss_pred CCC----------------------cc-------------------eeeccCCCEEEEEEEcCCC--CCCcCEEECCeeE
Confidence 311 10 1246789999999999642 3689999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEE-ecCceeEEEEeechhhhhccceEEEEEecCC
Q 008085 489 FVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFR-ADNPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 489 ~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
|||+++.|.+. ....++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|...+
T Consensus 408 ~Vl~~~~g~~~----~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 408 KVISRTSGNNA----RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEEESSCCSS----SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEEcCCCCc----CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 99999655332 11234455 8999999999999999999 8999999999999999999999999998754
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=3.2e-81 Score=677.63 Aligned_cols=430 Identities=17% Similarity=0.234 Sum_probs=317.8
Q ss_pred ceEEEEEEEEEEEeec--CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCC----------------------Cee
Q 008085 28 ITRHYKFDIKMQNVTR--LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN----------------------NIS 83 (578)
Q Consensus 28 ~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~----------------------~~s 83 (578)
...+|+|++++...++ ++..+.+|+|||++|||+|++++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3456999999988765 4578999999999999999999999999999999975 999
Q ss_pred EEeecccccCCcCCCCCCC--ccccccCCCCeE---EEEEEECCCCcceEEecCcccc----c-cceeeeEEEeCCCCCC
Q 008085 84 IHWHGIRQLLSGWADGPAY--ITQCPIQTGQSY---VYNFTISGQRGTLFWHAHISWL----R-ATVYGPLVIFPKRGVP 153 (578)
Q Consensus 84 iH~HG~~~~~~~~~DG~~~--~tq~~i~PG~~~---~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~ 153 (578)
|||||+++++. +||+|+ ++||+|+||++| +|+|++.+++||||||||.++. . +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 99999999854 999995 799999999555 9999986689999999999863 2 7999999999987655
Q ss_pred CCCCCCCCceeEEeeeecccchHHHHHHhh----------cCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEE
Q 008085 154 YPFPKPYKEVPIIFGEWFNADTEAIINQSL----------QTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTY 223 (578)
Q Consensus 154 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~ 223 (578)
++++..++|++|+++||+++...+++.... ........+++++|||+.+ +.+++++| +|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EE
Confidence 556667899999999998765433211100 0011234579999999976 67999885 89
Q ss_pred EEEEEecCCCCeEEEEEcCc-eEEEEEeCCCCC-CceEEeEEEECCCceEEEEEEeCCCCCCcc-eEEEeccccCCCCCC
Q 008085 224 LLRLINAALNDELFFSIANH-SVTVVDVDAIYI-KSFQTDILLITPGQTTNILLKAKPSYPNAT-FLMSARPYATGQGTF 300 (578)
Q Consensus 224 rlRliNa~~~~~~~~~i~gh-~~~via~DG~~~-~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~-y~l~~~~~~~~~~~~ 300 (578)
||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.+++|.|+|||||||+|++++.+ |. +.++.... +.+..
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~--g~~~~l~~~~~--~~~~~ 326 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYE--GESIILANSAG--CGGDV 326 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGT--TCEEEEEECCC--SSSSC
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCC--CcEEEEEeccc--ccccC
Confidence 99999999999999999999 999999999998 89999999999999999999999865 55 44444321 11111
Q ss_pred CCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCC
Q 008085 301 DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTN 380 (578)
Q Consensus 301 ~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~ 380 (578)
......++++|..+.. .. .+.. ...|.. +..+... + ..+...++++.+...+..
T Consensus 327 ~~~~~~~il~~~~~~~-------~~--~~~~-~~~p~~------------l~~~~~~--~-~~~~~~~~~~~l~~~~~~- 380 (513)
T 2wsd_A 327 NPETDANIMQFRVTKP-------LA--QKDE-SRKPKY------------LASYPSV--Q-HERIQNIRTLKLAGTQDE- 380 (513)
T ss_dssp CTTTTTEEEEEECCSC-------CS--SCCC-CCCCSB------------CSCCGGG--C-CCCEEEEEEEEEEEEECT-
T ss_pred CCCCCcceEEEEeccC-------cc--cCcc-CCCCcc------------ccCCCCc--c-cCCCcceEEEEEEeecCC-
Confidence 2223457888876531 00 0000 111110 1111000 0 011123455555433221
Q ss_pred CCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecC
Q 008085 381 PCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPF 460 (578)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (578)
.....|+|||++|..+. .+.++.
T Consensus 381 -------------~g~~~~~iNg~~~~~~~--------------------------------------------~~~~~~ 403 (513)
T 2wsd_A 381 -------------YGRPVLLLNNKRWHDPV--------------------------------------------TETPKV 403 (513)
T ss_dssp -------------TSCEEEEETTBCTTSCC--------------------------------------------CBCCBT
T ss_pred -------------CCCceEeECCccCCCcc--------------------------------------------cEecCC
Confidence 12335789998763220 123567
Q ss_pred CCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCC---CCCCC------CCCCCCCCCCCCcceeeeecCCcEEEEEEE
Q 008085 461 NASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFG---NYDPS------KDRKNFNLIDPVERNTVGVPSGGWVAIRFR 531 (578)
Q Consensus 461 g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~------~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ 531 (578)
|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++. ..+......++.|||||.|+++++++|+|+
T Consensus 404 g~~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~ 480 (513)
T 2wsd_A 404 GTTEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAAT 480 (513)
T ss_dssp TCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEE
T ss_pred CCEEEEEEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEE
Confidence 999999999965 479999999999999998742 12211 001112233456999999999999999999
Q ss_pred e-cCceeEEEEeechhhhhccceEEEEEec
Q 008085 532 A-DNPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 532 a-dnpG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
+ ||||.|+|||||++|+|.|||+.|+|.+
T Consensus 481 f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 481 FGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp CCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred ecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 8 8999999999999999999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.3e-80 Score=661.51 Aligned_cols=417 Identities=22% Similarity=0.314 Sum_probs=310.8
Q ss_pred ccCceEEEEEEEEEEEeec-CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCc
Q 008085 25 VASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 103 (578)
+.+.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|||||||+++++ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 5578899999999999997 58999999999999999999999999999999999999999999999864 599997
Q ss_pred cccccCCCCeEEEEEEECCC-CcceEEecCccc----cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHH
Q 008085 104 TQCPIQTGQSYVYNFTISGQ-RGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEA 177 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~-~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (578)
||+|+||++|+|+|+++++ +||||||||.++ |. +||+|+|||+++++..+++ ++++ |+++||+.+...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999998543 899999999854 33 8999999999987655443 3444 9999998765432
Q ss_pred HHH---HhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCC
Q 008085 178 IIN---QSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIY 254 (578)
Q Consensus 178 ~~~---~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~ 254 (578)
+.. .....| ..++.++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||++
T Consensus 197 ~~~~~~~~~~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 210 000112 3468999999975 789999998 9999999999999999999999999999887
Q ss_pred C-CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCC-CCcceEEEEEEecCCCCCCCcccccCCCCCCC
Q 008085 255 I-KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTF-DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMK 332 (578)
Q Consensus 255 ~-~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~-~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~ 332 (578)
+ +|+.+++|.|+|||||||+|++++. +.|.|.+.......... .......++++..... .
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~-------- 323 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAPKD---GNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-------N-------- 323 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECSSC---EEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-------C--------
T ss_pred cCCceEeCeEEECCccEEEEEEEcCCC---cEEEEEEecccccCccccCCCCceeEEEEecCCC-------C--------
Confidence 6 8999999999999999999999985 88999886533211000 1122333444432111 0
Q ss_pred CCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCC-----ceeeeecceeee
Q 008085 333 PTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNST-----KFAASVNNFSFI 407 (578)
Q Consensus 333 p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ing~~~~ 407 (578)
..+|. .+..+... ..+ ...+++.+....... . .......+. ...|+|||+.|.
T Consensus 324 ~~lP~------------~l~~~~~~----~~~-~~~r~~~l~~~~~~~-~----~~~~~~~~~~~~~~~~~~~iNG~~~~ 381 (481)
T 3zx1_A 324 VELPK------------NLKIFKPS----EEP-KEFKEIIMSEDHMQM-H----GMMGKSEGELKIALASMFLINRKSYD 381 (481)
T ss_dssp CCCCS------------CSCCCCCC----CCC-CEEEEEEEEECCSTT-T----TGGGCCHHHHHHHHHTTEEETTBCCC
T ss_pred ccCCc------------cccCCCCC----CCC-CcEEEEEEeccchhc-c----cccccccccccccccceeEECCEeCC
Confidence 01111 11111100 111 134444444322100 0 000000000 013889987662
Q ss_pred CCChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCc
Q 008085 408 LPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFN 487 (578)
Q Consensus 408 ~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~ 487 (578)
+. ...+.++.|++|+|+|.|.+ .+.|||||||+.
T Consensus 382 ~~-------------------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~ 415 (481)
T 3zx1_A 382 LK-------------------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQ 415 (481)
T ss_dssp TT-------------------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCC
T ss_pred CC-------------------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccE
Confidence 11 12357789999999999954 589999999999
Q ss_pred eEEEEec-CCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 008085 488 FFVIGQG-FGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 488 F~Vl~~g-~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
|||+++. .|. .....++.|||||.|+|+++++|+|+|||||.|+|||||++|+|.|||..|+|+
T Consensus 416 F~vl~~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 416 FELISSKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEEEEEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EEEEEecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 9999982 121 112345789999999999999999999999999999999999999999999996
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.2e-79 Score=684.30 Aligned_cols=462 Identities=17% Similarity=0.233 Sum_probs=307.2
Q ss_pred CceEEEEEEEEEEEeec--CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCC-----------------------
Q 008085 27 SITRHYKFDIKMQNVTR--LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN----------------------- 81 (578)
Q Consensus 27 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~----------------------- 81 (578)
...+.|+|++++...++ ++..+.+|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 34578999998877665 55678999999999999999999999999999999654
Q ss_pred ------------------eeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccc----cc-c
Q 008085 82 ------------------ISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-A 138 (578)
Q Consensus 82 ------------------~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~ 138 (578)
|+|||||+++++ ++||++ ||+|+||++|+|+|++.+++||||||||.++ |. +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678999999865 489875 8999999999999998677899999999865 33 8
Q ss_pred ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHHHHHhh-------------c---CCCCCCCCceEEEcCCCC
Q 008085 139 TVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSL-------------Q---TGAGPNVSDAYTINGLPG 202 (578)
Q Consensus 139 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~---~g~~~~~~~~~liNG~~~ 202 (578)
||+|+|||+++.+..++++.+++|++|+|+||+++...+...... . ....+..++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999987777777778999999999997754332211000 0 001223568999999976
Q ss_pred CCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCc-------eEEEEEeCCCCC-CceEE------eEEEECCC
Q 008085 203 PLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH-------SVTVVDVDAIYI-KSFQT------DILLITPG 268 (578)
Q Consensus 203 ~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh-------~~~via~DG~~~-~P~~~------~~l~l~pG 268 (578)
|.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.+ ++|.|+||
T Consensus 265 ----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 265 ----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 7788876 57999999999999999999988 599999999998 56655 48999999
Q ss_pred ceEEEEEEeCCCCCCcce-EEEeccccCCCC---CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccc
Q 008085 269 QTTNILLKAKPSYPNATF-LMSARPYATGQG---TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFA 344 (578)
Q Consensus 269 eR~dvlv~~~~~~~~g~y-~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~ 344 (578)
|||||+|++++.. |.+ ++.......... .........+++|........ .. ...|......
T Consensus 334 eRydVlV~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~p~~~~~~-- 398 (612)
T 3gyr_A 334 ERFDLLVDFRALG--GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEE-------DS----FALPEVLSGS-- 398 (612)
T ss_dssp CEEEEEEECTTCT--TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCC-------CC----CCCCSSCCSS--
T ss_pred eEEEEEEECCCCC--ceEEEEEecCCcCCcCccCccccccccceeeecccCCCCC-------Cc----cccccccccc--
Confidence 9999999999975 443 444332211111 111233456666654332000 00 0111110000
Q ss_pred cccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeeccee----eeCCChhhhhhhhcC
Q 008085 345 FNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFS----FILPSTALLQAHFFG 420 (578)
Q Consensus 345 ~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~----~~~p~~~ll~~~~~~ 420 (578)
.... ....+ ...+.......... ... .....+.+.... +..+....+
T Consensus 399 ------~~~~-----~~~~~--~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------ 449 (612)
T 3gyr_A 399 ------FRRM-----SHDIP--HGHRLIVLTPPGTK---------GSG-GHPEIWEMAEVEDPADVQVPAEGVI------ 449 (612)
T ss_dssp ------CCCC-----CTTSC--CEEEEEEEECTTCT---------TTT-TCCEEEEEEECC-----CCSCTTEE------
T ss_pred ------cccc-----ccccc--cccccccccccccc---------ccc-cccccccccccccccccccccccee------
Confidence 0000 00000 00000000000000 000 000011111000 000000000
Q ss_pred CCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCC
Q 008085 421 QNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDP 500 (578)
Q Consensus 421 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~ 500 (578)
.....+..+..+..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+..
T Consensus 450 -----~~~~~~~~~~~~~~n~------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~ 515 (612)
T 3gyr_A 450 -----QVTGADGRTKTYRRTA------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASG 515 (612)
T ss_dssp -----EEECTTSCEEEEEEEE------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTT
T ss_pred -----eeccCCCccccccccC------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcc
Confidence 0000000011111100 1112344577899999999999965 4899999999999999986543322
Q ss_pred CC---------------CCCCCCCCCCCcceeeeecCCcEEEEEEE-ecCceeEEEEeechhhhhccceEEEEEecCC
Q 008085 501 SK---------------DRKNFNLIDPVERNTVGVPSGGWVAIRFR-ADNPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 501 ~~---------------~~~~~~~~~p~~rDTv~v~~~~~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
.. .....+..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+++
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 516 FDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred ccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 10 11245677889999999999999999999 6999999999999999999999999998765
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.8e-80 Score=659.61 Aligned_cols=395 Identities=18% Similarity=0.282 Sum_probs=301.1
Q ss_pred eEEEEEEEEEEEeecCceeeEEEEEcCC-CCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccc
Q 008085 29 TRHYKFDIKMQNVTRLCHTKSIITVNGQ-FPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCP 107 (578)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~-~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~ 107 (578)
.++|+|++ |+|||+ +|||+|++++||+|+|+|+|+|+++|||||||+++++ ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 56777777 999999 9999999999999999999999999999999999974 4999997 99
Q ss_pred cCCCCeEEEEEEECCCCcceEEecCccc----cc-cceeeeEEEeCCCCCCCCCCCCC-CceeEEeeeecccchHHHHHH
Q 008085 108 IQTGQSYVYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPFPKPY-KEVPIIFGEWFNADTEAIINQ 181 (578)
Q Consensus 108 i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~~ 181 (578)
|+||++|+|+|++++++||||||||.++ |. +||+|+|||+++++. .+++ +| +|++|+++||+++. .++...
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~ 157 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYN 157 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccc
Confidence 9999999999998668999999999543 44 899999999998765 3333 34 89999999998876 332110
Q ss_pred h-hcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEE--cC---ceEEEEEeCCCCC
Q 008085 182 S-LQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI--AN---HSVTVVDVDAIYI 255 (578)
Q Consensus 182 ~-~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i--~g---h~~~via~DG~~~ 255 (578)
. ...+.....++.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||+++
T Consensus 158 ~~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~ 226 (448)
T 3aw5_A 158 PTPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFL 226 (448)
T ss_dssp CCHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEE
T ss_pred ccccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCcc
Confidence 0 00001123569999999975 78999999 9999999999999999999 99 9999999999999
Q ss_pred C-ceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCC----------CCCCcceEEEEEEecCCCCCCCcccc
Q 008085 256 K-SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG----------TFDNSTVAGILEYEAPAKFPRSSTVS 324 (578)
Q Consensus 256 ~-P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~p~~~~~~ 324 (578)
+ |+.++++.|+|||||||+|+++ . +.|+|++.+...+.+ ........++++|.+... .
T Consensus 227 ~~P~~~~~l~l~pgeR~dvlv~~~-~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 295 (448)
T 3aw5_A 227 ARPIEVRALFLAPAERAEVVVELG-E---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE-------A 295 (448)
T ss_dssp EEEEEESCEEECTTCEEEEEEEEC-S---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECC-------C
T ss_pred CCceEeceEEECCcceEEEEEECC-C---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCC-------C
Confidence 7 9999999999999999999998 2 789999986543221 011234567788865432 0
Q ss_pred cCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecce
Q 008085 325 IKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNF 404 (578)
Q Consensus 325 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~ 404 (578)
+. |. .|..+... ..+...++++.+..+ ...|+|||+
T Consensus 296 --------~~-p~------------~L~~lp~~----~~~~~~~~~~~l~~~-------------------~~~~~iNg~ 331 (448)
T 3aw5_A 296 --------VP-VE------------ALSDPPPE----PPKPTRTRRFALSLS-------------------GMQWTINGM 331 (448)
T ss_dssp --------CC-CC------------CCSCCCCC----CCCCSEEEEEEEEEE-------------------TTEEEETTB
T ss_pred --------CC-cc------------ccCCCCCC----CCCCCceEEEEEeCC-------------------CceeeECCC
Confidence 00 10 01111100 112334555555431 124999999
Q ss_pred eeeCCChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEE-ecCCCEEEEEEecCCCCCCCCCCeee
Q 008085 405 SFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVV-LPFNASVELVMQDTSTLGAESHPLHL 483 (578)
Q Consensus 405 ~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~i~N~~~~~~~~HP~Hl 483 (578)
+|..+. | .+. ++.|++|+|+|+|.+. .+.|||||
T Consensus 332 ~~~~~~-----------------------p--------------------~~~~~~~g~~v~~~i~N~~~--~~~HP~HL 366 (448)
T 3aw5_A 332 FWNASN-----------------------P--------------------LFEHVSVEGVELWEIVNDKA--SMPHPMHL 366 (448)
T ss_dssp CCCTTC-----------------------T--------------------TCCCEEECEEEEEEEEECSS--SCCEEEEE
T ss_pred cCCCCC-----------------------C--------------------ceeccCCCCeEEEEEEcCCC--CCCcCEEE
Confidence 884321 1 112 5679999999999651 47899999
Q ss_pred cCCceEEEEecCCCCCCCCCCCCC----CCCCCCcceeeeecCCcEEEEE--EE---ecCceeEEEEeechhhhhccceE
Q 008085 484 HGFNFFVIGQGFGNYDPSKDRKNF----NLIDPVERNTVGVPSGGWVAIR--FR---ADNPGVWFMHCHFEVHISWGLKM 554 (578)
Q Consensus 484 HG~~F~Vl~~g~g~~~~~~~~~~~----~~~~p~~rDTv~v~~~~~~~ir--f~---adnpG~w~~HCHil~H~d~GMm~ 554 (578)
|||+||||+++ |.+........+ +..++.|||||.|+++++++|+ |+ +||| |+|||||++|||.|||+
T Consensus 367 HG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~ 443 (448)
T 3aw5_A 367 HGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMI 443 (448)
T ss_dssp SSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEE
T ss_pred CCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCce
Confidence 99999999985 444311111122 3345679999999999998655 98 8999 99999999999999999
Q ss_pred EEEEe
Q 008085 555 AWIVL 559 (578)
Q Consensus 555 ~~~V~ 559 (578)
+|+|.
T Consensus 444 ~~~V~ 448 (448)
T 3aw5_A 444 NIAVK 448 (448)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99884
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1e-78 Score=646.37 Aligned_cols=430 Identities=19% Similarity=0.247 Sum_probs=308.3
Q ss_pred CceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcccc
Q 008085 27 SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (578)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~ 106 (578)
...++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cC
Confidence 35678999999999999999999999999999999999999999999999999999999999999764 99997 89
Q ss_pred ccCCCCeEEEEEEECCCCcceEEecCcccc----c-cceeeeEEEeCCCCCCCCCCC--CCCceeEEeeeecccchHHHH
Q 008085 107 PIQTGQSYVYNFTISGQRGTLFWHAHISWL----R-ATVYGPLVIFPKRGVPYPFPK--PYKEVPIIFGEWFNADTEAII 179 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 179 (578)
+|+||++++|+|++.+++||||||||.++. . +||+|+|||+++++..++++. ..+|++|+++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 999999999999986668999999998653 3 899999999988764444433 246999999999886443221
Q ss_pred HHhh-cCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEE-cCceEEEEEeCCCCC-C
Q 008085 180 NQSL-QTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI-ANHSVTVVDVDAIYI-K 256 (578)
Q Consensus 180 ~~~~-~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~ 256 (578)
.... .....+..++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||+++ +
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred ccccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 0000 0000123568999999975 55666 5689999999999999999999 699999999999987 8
Q ss_pred ceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCC-CCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCC
Q 008085 257 SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQ-GTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTL 335 (578)
Q Consensus 257 P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~-~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~ 335 (578)
|+.+++|.|+|||||||+|++++. +.|.|++....... ..........+++...... . .. ..+
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~--~~----~~~ 302 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVNDN---KPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAI-------S--AS----GAL 302 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEECTT---CCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEE-------E--CC----CCC
T ss_pred ccEeceEEECCCCEEEEEEEeCCC---ceEEEEEeccCCCCcccccccCccceeEeccccc-------C--CC----CCC
Confidence 999999999999999999999975 88999876533211 0001111223333321110 0 00 001
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccC----------------CCCCC---------CCCCccC
Q 008085 336 PALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLG----------------TNPCP---------KNQTCQG 390 (578)
Q Consensus 336 p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~----------------~~~~~---------~~~~~~~ 390 (578)
|. .|..+.. .+ ......++++.+.+... ..... .+.....
T Consensus 303 P~------------~L~~~~~--~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (488)
T 3od3_A 303 PD------------TLSSLPA--LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNH 367 (488)
T ss_dssp CS------------CCCCCCC--CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCC
T ss_pred Cc------------ccccCCC--Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccc
Confidence 11 1111100 00 01112345555543200 00000 0000000
Q ss_pred CCCCCce----eeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEE
Q 008085 391 PNNSTKF----AASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVEL 466 (578)
Q Consensus 391 ~~~~~~~----~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~ 466 (578)
...+..+ .|+|||+.|.+. ...+.++.|++|+|
T Consensus 368 ~~~g~~~~~~~~~~ING~~~~~~-------------------------------------------~~~~~~~~G~~e~w 404 (488)
T 3od3_A 368 MNHGGKFDFHHANKINGQAFDMN-------------------------------------------KPMFAAAKGQYERW 404 (488)
T ss_dssp SCCCGGGCGGGCEEETTBCCCTT-------------------------------------------CCSEECCBSSCEEE
T ss_pred ccccccccccceeeECCeeCCCC-------------------------------------------CCceEcCCCCEEEE
Confidence 0001112 368999877322 11256789999999
Q ss_pred EEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec----CceeEEEEe
Q 008085 467 VMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD----NPGVWFMHC 542 (578)
Q Consensus 467 ~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad----npG~w~~HC 542 (578)
.|.|.+. .+.|||||||++|+|++++... ....++.|||||.|+ |+++.|+|++| +||.|||||
T Consensus 405 ~l~N~~~--~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HC 472 (488)
T 3od3_A 405 VISGVGD--MMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHC 472 (488)
T ss_dssp EEECTTC--CCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEE
T ss_pred EEEeCCC--CCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeC
Confidence 9999752 4789999999999999986322 122346799999999 99999999974 578999999
Q ss_pred echhhhhccceEEEEE
Q 008085 543 HFEVHISWGLKMAWIV 558 (578)
Q Consensus 543 Hil~H~d~GMm~~~~V 558 (578)
||++|||.|||..|+|
T Consensus 473 H~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 473 HLLEHEDTGMMLGFTV 488 (488)
T ss_dssp SSHHHHHTTCEEEEEC
T ss_pred CchHHHhcCCcEEEEC
Confidence 9999999999999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.4e-77 Score=650.19 Aligned_cols=462 Identities=18% Similarity=0.232 Sum_probs=316.8
Q ss_pred CceEEEEEEEEEEEeecC--ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCC-----------------------
Q 008085 27 SITRHYKFDIKMQNVTRL--CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN----------------------- 81 (578)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~----------------------- 81 (578)
...++|+|++++...++. +..+.+|+|||++|||+|++++||+|+|+|+|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 446889999999987754 4689999999999999999999999999999999753
Q ss_pred ------------------eeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccc----cc-c
Q 008085 82 ------------------ISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-A 138 (578)
Q Consensus 82 ------------------~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~ 138 (578)
|+|||||+++.+. +||++ ||+|+||++++|+|++.+++||||||||.++ |. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 99986 8999999999999998668999999999986 43 8
Q ss_pred ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHH-HHH-Hh------hc----CCC----CCCCCceEEEcCCCC
Q 008085 139 TVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEA-IIN-QS------LQ----TGA----GPNVSDAYTINGLPG 202 (578)
Q Consensus 139 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~----~~~~~~~~liNG~~~ 202 (578)
||+|+|||+++++..++++.+|+|++|+++||+++...+ .+. .. .. .+. .+..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987666666678999999999999864321 000 00 00 111 124679999999976
Q ss_pred CCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCc-------eEEEEEeCCCCC-CceEEe------EEEECCC
Q 008085 203 PLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH-------SVTVVDVDAIYI-KSFQTD------ILLITPG 268 (578)
Q Consensus 203 ~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh-------~~~via~DG~~~-~P~~~~------~l~l~pG 268 (578)
|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 78999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCCCcceEEEeccccCCCCCC---CCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccc
Q 008085 269 QTTNILLKAKPSYPNATFLMSARPYATGQGTF---DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAF 345 (578)
Q Consensus 269 eR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~---~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~ 345 (578)
|||||+|++++.+ |.+|+|+........+.. .......++++......+. + ....+..+.+..+.... ...
T Consensus 334 eR~dvlVd~~~~~-g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~--~-~~~~P~~L~~~~~~l~~-~~~- 407 (612)
T 2g23_A 334 ERFDLLVDFRALG-GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEE--D-SFALPEVLSGSFRRMSH-DIP- 407 (612)
T ss_dssp CEEEEEEECTTCT-TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCC--C-CCCCCSSCCSSCCCCCT-TSC-
T ss_pred CeEEEEEECCCCC-CCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCC--C-CCCCChhhccccccCCc-ccc-
Confidence 9999999999874 467999876421111100 0111123555543321000 0 00000001000000000 000
Q ss_pred ccccccccccCCCCCCCCC-cCcceEEEEEeccCCC----CCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcC
Q 008085 346 NYTTRLRSLANAQFPANVP-QTVNKRFFFTVGLGTN----PCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFG 420 (578)
Q Consensus 346 ~~~~~l~~l~~~~~p~~~p-~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~ 420 (578)
. ..++..+..+ .... ....+.+.+.-..... +...-......+ |....|+|||+.|.
T Consensus 408 ~-~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~iNG~~~~------------- 469 (612)
T 2g23_A 408 H-GHRLIVLTPP---GTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGAD-GRTKTYRRTAATFN------------- 469 (612)
T ss_dssp C-EEEEEEECCT---TCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTT-SCEEEEEEEECSTT-------------
T ss_pred c-ceeEEeeccc---cccccccccceeeccccccccccccccccceeeeccC-CceeEEEECCccCC-------------
Confidence 0 0000000000 0000 0000111111000000 000000000011 22234556665441
Q ss_pred CCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCC--
Q 008085 421 QNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNY-- 498 (578)
Q Consensus 421 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~-- 498 (578)
....+.++.|++|+|+|.|.+ .+.|||||||+.|+|++++.+.+
T Consensus 470 -------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~~ 515 (612)
T 2g23_A 470 -------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASG 515 (612)
T ss_dssp -------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEECTT
T ss_pred -------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCccccc
Confidence 123467889999999999975 48999999999999999864322
Q ss_pred -CCCCC------------CCCCCCCCCCcceeeeecCCcEEEEEEEec-CceeEEEEeechhhhhccceEEEEEecCC
Q 008085 499 -DPSKD------------RKNFNLIDPVERNTVGVPSGGWVAIRFRAD-NPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 499 -~~~~~------------~~~~~~~~p~~rDTv~v~~~~~~~irf~ad-npG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
+.... ...++..++.|||||.|+|+++++|+|+|| |||.|||||||++|||.|||+.|+|.+.+
T Consensus 516 ~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 516 FDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 11100 123456677899999999999999999999 99999999999999999999999998643
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.3e-53 Score=433.19 Aligned_cols=271 Identities=25% Similarity=0.417 Sum_probs=227.3
Q ss_pred ceEEEEEEEEEEEeecC-ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcccc
Q 008085 28 ITRHYKFDIKMQNVTRL-CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (578)
Q Consensus 28 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~ 106 (578)
++|+|+|++++..+++. |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++....++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 47999999999999975 78899999999999999999999999999999999999999999999987789999999999
Q ss_pred ccCCCCeEEEEEEECCCCcceEEecCccccc----cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHHHHHh
Q 008085 107 PIQTGQSYVYNFTISGQRGTLFWHAHISWLR----ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (578)
+|+||++++|+|++ +++||||||||.+.+. +||+|+|||++++..+.+. ..|+|++|+++||++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999998 7999999999997653 7999999999876432211 35889999999998754221 1
Q ss_pred hcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC-CceEEe
Q 008085 183 LQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI-KSFQTD 261 (578)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~P~~~~ 261 (578)
...+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~-------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPE-------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTS-------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCCC-------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 1122223357899999997632 2459999999999999999965 679999999999999999988 799999
Q ss_pred EEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCC-CCCCcceEEEEEEecCC
Q 008085 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG-TFDNSTVAGILEYEAPA 315 (578)
Q Consensus 262 ~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~-~~~~~~~~ail~y~~~~ 315 (578)
++.|.||||+||+++++++ |.|+++||...-... ........++++|++..
T Consensus 227 tv~l~pger~~v~~~a~~p---G~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDNP---GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCCC---eeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999987 999999996433210 01113457889998754
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.3e-52 Score=485.36 Aligned_cols=270 Identities=17% Similarity=0.247 Sum_probs=207.1
Q ss_pred ccccCceEEEEEEEEEEEeecC----------------------------ceeeEEE-------EEcCC--------CCC
Q 008085 23 LAVASITRHYKFDIKMQNVTRL----------------------------CHTKSII-------TVNGQ--------FPG 59 (578)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~----------------------------g~~~~~~-------~~NG~--------~pg 59 (578)
..+.+++|+|.+.|++..+... |+.+..+ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 5556789999999999876532 2223333 57877 999
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccC----CcCCCCCCC--ccccccCCCCeEEEEEEECCC---------C
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLL----SGWADGPAY--ITQCPIQTGQSYVYNFTISGQ---------R 124 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~----~~~~DG~~~--~tq~~i~PG~~~~Y~~~~~~~---------~ 124 (578)
|+||+++||+|+|+|+|.|+++++|||||++++. .+|+||+++ +|||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 9999999999999999999999999999999974 467888888 899999999999999998654 4
Q ss_pred cceEEecCccccc---cceeeeEEEeCCCCCCCCCC-CCCCceeEEee------eecccchHHHHH--HhhcCCCC---C
Q 008085 125 GTLFWHAHISWLR---ATVYGPLVIFPKRGVPYPFP-KPYKEVPIIFG------EWFNADTEAIIN--QSLQTGAG---P 189 (578)
Q Consensus 125 Gt~wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~--~~~~~g~~---~ 189 (578)
||||||||.+.++ +||+|+|||++++...+|.+ ..|+|++|+++ ||+.......+. ........ .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~ 254 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQ 254 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCcccccccccccc
Confidence 9999999999875 89999999999876444332 35789999999 455443221110 00000000 0
Q ss_pred CCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCC
Q 008085 190 NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPG 268 (578)
Q Consensus 190 ~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pG 268 (578)
..++.++|||+.+. ..+.++|++|++|||||+|+|.. ..+.|||+||.|++ +|..+|++.|+||
T Consensus 255 ~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pG 319 (1065)
T 2j5w_A 255 QSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPA 319 (1065)
T ss_dssp HHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBT
T ss_pred ccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCC
Confidence 12357999999741 24789999999999999999976 68899999999992 5789999999999
Q ss_pred ceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 269 QTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 269 eR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
||+||+|+++++ |.|+|+|+...... .+..+.++|.+..
T Consensus 320 er~dVlv~~~~p---G~y~i~~h~~~h~~-----~Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 320 TLFDAYMVAQNP---GEWMLSCQNLNHLK-----AGLQAFFQVQECN 358 (1065)
T ss_dssp CEEEEEEECCSC---EEEEEEECSHHHHH-----TTCEEEEEEECSC
T ss_pred cEEEEEEEeCCC---eeEEEEecCcchhh-----CCCEEEEEEecCC
Confidence 999999999996 99999999643221 2457778887544
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=3.8e-52 Score=427.25 Aligned_cols=271 Identities=26% Similarity=0.471 Sum_probs=225.7
Q ss_pred ceEEEEEEEEEEEeecC-ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcccc
Q 008085 28 ITRHYKFDIKMQNVTRL-CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (578)
Q Consensus 28 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~ 106 (578)
.+++|+|++++..++++ |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++...+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 46899999999999986 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEECCCCcceEEecCccc--c-c-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHHHHHh
Q 008085 107 PIQTGQSYVYNFTISGQRGTLFWHAHISW--L-R-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (578)
+|+||++++|+|++ .++||||||||... + . +||+|+|||+++.....+ ...|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999998 78999999999876 3 3 799999999987653221 134789999999997632110 0
Q ss_pred hcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCC-ceEEe
Q 008085 183 LQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK-SFQTD 261 (578)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~-P~~~~ 261 (578)
...+.....++.++|||+.++ ....+++++|++|||||+|++. ..+.|||+||.|+||+.||.+++ |..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 011112224689999999763 1245899999999999999995 48899999999999999999884 88999
Q ss_pred EEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCC-CCCcceEEEEEEecCC
Q 008085 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGT-FDNSTVAGILEYEAPA 315 (578)
Q Consensus 262 ~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 315 (578)
++.|.||||+||+|+++++ |.|+++|+....+... .......++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~~p---G~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADNP---GRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCCC---eeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999987 9999999965422111 1223457899998654
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.4e-54 Score=484.55 Aligned_cols=238 Identities=14% Similarity=0.190 Sum_probs=181.9
Q ss_pred EEEEEEEEeecC-ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCC--------c
Q 008085 33 KFDIKMQNVTRL-CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY--------I 103 (578)
Q Consensus 33 ~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~--------~ 103 (578)
.++++++..+.. |..+..|+ ++|||+||+++||+|+|+|+|.|++++||||||++++.. +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 555555555544 55555543 899999999999999999999999999999999998754 666664 8
Q ss_pred cccccCCCCeEEEEEEECC---------CCcceEEecCcccc--c-cceeeeEEEeCCCCCCCCCCCCCCceeEEeee--
Q 008085 104 TQCPIQTGQSYVYNFTISG---------QRGTLFWHAHISWL--R-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGE-- 169 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 169 (578)
+||+|+||++|+|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999853 46999999999874 3 89999999999865432221224888888764
Q ss_pred ----ecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCC-eEEEEEcCce
Q 008085 170 ----WFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHS 244 (578)
Q Consensus 170 ----~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~ 244 (578)
|+.......+... .........+.++|||+.+ | ..+.+++++|++|||||+|++... .+.|||+||.
T Consensus 205 e~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDR-DAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCccccccccccccccC-CCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 4443321111111 1111122357789999964 1 346799999999999999999765 6899999999
Q ss_pred EEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecccc
Q 008085 245 VTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYA 294 (578)
Q Consensus 245 ~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~ 294 (578)
|+|++ ..+|++.|.|||+++|+++++++ |.|+++||...
T Consensus 277 f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~p---G~w~~hCH~~~ 315 (742)
T 2r7e_A 277 FLVRN--------HRQASLEISPITFLTAQTLLMDL---GQFLLFCHISS 315 (742)
T ss_dssp CEETT--------EECCSCCCCTTCCCEEEECCCSC---SEECCCCCSSS
T ss_pred EEEEe--------EecceEEeCCCcEEEEEEEeCCC---eeEEEEeCChh
Confidence 99984 34788999999999999999997 99999999643
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.7e-50 Score=432.38 Aligned_cols=402 Identities=15% Similarity=0.112 Sum_probs=261.3
Q ss_pred ccCceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcc
Q 008085 25 VASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
+.+.+++++++++...+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .+
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~ 88 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RS 88 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------EC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------cc
Confidence 344556666666655555544 456899999 999999999999999999998889999998642 25
Q ss_pred ccccCCCCeEEEEEEECCCCcceEEecCccccc-cceeeeEEEeCCCCCCCCCC-----CCCCceeEEeeeecccchHHH
Q 008085 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFP-----KPYKEVPIIFGEWFNADTEAI 178 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~-----~~~~e~~l~~~d~~~~~~~~~ 178 (578)
+|+|.||++++|+|++ .++||||||||..++. +||.|.|+|+++....+..+ ....+++..+ |+.......+
T Consensus 89 ~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 89 AIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred ceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 6999999999999998 6799999999998776 79999999998764322100 0000111000 0000000000
Q ss_pred -H--HHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCC-CCeEEEEEcCceEEEEEeCCCC
Q 008085 179 -I--NQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAAL-NDELFFSIANHSVTVVDVDAIY 254 (578)
Q Consensus 179 -~--~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~~ 254 (578)
+ ......-..+...+.+++||+. ..|++++++|++||||++|.+. ...+.+++||. ++.||.+
T Consensus 167 ~l~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~ 233 (447)
T 2dv6_A 167 DLETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA 233 (447)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG
T ss_pred EEEEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC
Confidence 0 0000000011224688999984 2389999999999999999985 34567788774 3578863
Q ss_pred CCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCC
Q 008085 255 IKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPT 334 (578)
Q Consensus 255 ~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~ 334 (578)
+++.|.||||++++++++++ |+||++|+...... . ...+..+.+.+.....
T Consensus 234 ------~~~~i~pG~~~~~~~~~~~~---G~~~yh~h~~~~~~-~-~~~Gl~g~l~v~~~~~------------------ 284 (447)
T 2dv6_A 234 ------AFTQTDPGEETVVTFKALIP---GIYVYHCATPSVPT-H-ITNGMYGLLLVEPEGG------------------ 284 (447)
T ss_dssp ------GGCCBCTTCEEEEEEECCSC---EEEEEECCSSSHHH-H-HHTTCEEEEEEECTTC------------------
T ss_pred ------ccEEeCCCCEEEEEEECCCC---eEEEEEeCCCChHH-H-HhCCCEEEEEEeCCCC------------------
Confidence 23469999999999999886 99999998521100 0 0123456777753321
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhh
Q 008085 335 LPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALL 414 (578)
Q Consensus 335 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll 414 (578)
.|...... . ..+....... . . ...... ....... .+ .....|.+||+.+...
T Consensus 285 ~P~~d~~~-~----~~~~~~~~~~---~-~-~~~g~~--~~~~~~~--------~~---~~~~~~~iNG~~~~~~----- 336 (447)
T 2dv6_A 285 LPQVDREF-Y----VMQGEIYTVK---S-F-GTSGEQ--EMDYEKL--------IN---EKPEYFLFNGSVGSLT----- 336 (447)
T ss_dssp SCCCSEEE-E----EEEEEECBSS---C-T-TCCEEC--CBBHHHH--------HT---TCCSEEEETTSTTCCC-----
T ss_pred CCCCCeeE-E----EEecccccCC---c-c-cccccc--cCChHHh--------hc---cCCCEEEECCcccCCC-----
Confidence 11111100 0 0001100000 0 0 000000 0000000 00 1112467887644110
Q ss_pred hhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEec
Q 008085 415 QAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQG 494 (578)
Q Consensus 415 ~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g 494 (578)
....+.++.|++++|+|.|.+. ...||||||||+|+||+.+
T Consensus 337 -------------------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~d 377 (447)
T 2dv6_A 337 -------------------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSL 377 (447)
T ss_dssp -------------------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGG
T ss_pred -------------------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcC
Confidence 0135688899999999999753 4689999999999999985
Q ss_pred CCCCCCCCCCCCCCCCCCC-cceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecCCC
Q 008085 495 FGNYDPSKDRKNFNLIDPV-ERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNGNL 563 (578)
Q Consensus 495 ~g~~~~~~~~~~~~~~~p~-~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 563 (578)
.+. +..|. +|||+.|++|+++.|+|++||||.|+||||+++|++.||+++|.|+....
T Consensus 378 G~~-----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 378 GSV-----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp GCS-----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred Ccc-----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 321 12344 79999999999999999999999999999999999999999999987653
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.1e-48 Score=399.47 Aligned_cols=262 Identities=19% Similarity=0.270 Sum_probs=219.7
Q ss_pred ccCceEEEEEEEEEEEeec-CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC--CCeeEEeecccccCCcCCCCCC
Q 008085 25 VASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP--NNISIHWHGIRQLLSGWADGPA 101 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DG~~ 101 (578)
..+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 4567899999999999998 799999999999999999999999999999999996 589999999862 78887
Q ss_pred CccccccCCCCeEEEEEEECCCCcceEEecCccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHH
Q 008085 102 YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW---LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEA 177 (578)
Q Consensus 102 ~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (578)
..+ .|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++. ++..|+|++++++||++.....
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 543 49999999999998 78999999999854 33 89999999998753 2356899999999998864210
Q ss_pred H-------HHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEe
Q 008085 178 I-------INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDV 250 (578)
Q Consensus 178 ~-------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~ 250 (578)
. +.... + ..++.++|||+.+++.. .+.+++++|++|||||+|+|+.+.+.|||+||+|+||+.
T Consensus 182 ~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~ 251 (327)
T 1kbv_A 182 AQGLQPFDMDKAV--A---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYV 251 (327)
T ss_dssp CCEEECBCHHHHH--H---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred cccccccChhHhc--c---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEc
Confidence 0 00000 1 24589999999875422 267999999999999999998889999999999999999
Q ss_pred CCCCCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 251 DAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 251 DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
||.+++|..++++.|+||||+||+|+++++ |.|+|+|+..... ......|+++|++..
T Consensus 252 DG~~~~p~~~d~l~l~pGer~dv~v~~~~p---G~y~l~~h~~~~~----~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 252 EGGKLINENVQSTIVPAGGSAIVEFKVDIP---GNYTLVDHSIFRA----FNKGALGQLKVEGAE 309 (327)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEEECSC---EEEEEEESSTHHH----HHSSCEEEEEEESCC
T ss_pred CCCcCCCCceeEEEECCCCEEEEEEEeCCC---eEEEEEecccccc----ccCCcEEEEEECCCC
Confidence 999999999999999999999999999986 9999999964431 023468999998755
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=4.2e-48 Score=388.15 Aligned_cols=236 Identities=27% Similarity=0.374 Sum_probs=206.4
Q ss_pred cCceEEEEEEEEEEEeecC-ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcc
Q 008085 26 ASITRHYKFDIKMQNVTRL-CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
...+++|+|++++..+++. |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+|+++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 3557899999999988875 89999999999999999999999999999999999999999999983 4599999999
Q ss_pred ccccCCCCeEEEEEEECCCCcceEEecCccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHHHH
Q 008085 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISW---LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIIN 180 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 180 (578)
|++|+||++++|+|++ +++||||||||.+. +. +||+|+|||++++..+ ..|+|++|+++||+..+
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC------
Confidence 9999999999999998 89999999999984 33 8999999999987532 34789999999998752
Q ss_pred HhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCC-eEEEEEcCceEEEEEeCCCCC-Cce
Q 008085 181 QSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHSVTVVDVDAIYI-KSF 258 (578)
Q Consensus 181 ~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~-~P~ 258 (578)
| ..++.++|||+.+++ ..+.+++++|++||||++|++... .+.|||+||.|+|++ +|..+ .|.
T Consensus 177 -----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~ 241 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSE 241 (288)
T ss_dssp -----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSE
T ss_pred -----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCc
Confidence 1 235899999997621 124689999999999999999654 789999999999998 55554 678
Q ss_pred EEeEEEECCCceEEEEEEeCCCCCCcceEEEeccc
Q 008085 259 QTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (578)
Q Consensus 259 ~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~ 293 (578)
..|++.|.||||++|+++++++ |.|.++||..
T Consensus 242 ~~Dtv~v~pg~~~~v~~~~~~p---G~~~~hCH~~ 273 (288)
T 3gdc_A 242 YTDTISQVQGQRGILELRFPYP---GKFMFHAHKT 273 (288)
T ss_dssp EESEEEEETTCEEEEEECCCSC---EEEEEECSSH
T ss_pred eeeEEEeCCCceEEEEEECCCC---EEEEEEecCh
Confidence 9999999999999999999988 9999999853
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=8.5e-47 Score=438.68 Aligned_cols=389 Identities=14% Similarity=0.155 Sum_probs=261.4
Q ss_pred eeeEEEEEcCCCCC--ceEEEecCCEEEEEEEecCCCCeeEEeecccccC-CcCCCCCCCccccccCCCCeEEEEEEECC
Q 008085 46 HTKSIITVNGQFPG--PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLL-SGWADGPAYITQCPIQTGQSYVYNFTISG 122 (578)
Q Consensus 46 ~~~~~~~~NG~~pg--P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~-~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~ 122 (578)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++.+| |+|.||.+++|+|.+ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56789999999999 889999999999999976 4459999999998 89999999999 999999999999998 7
Q ss_pred CCcceEEecCccccc-cceeeeEEEeCCCCCCCCCCCCCCceeEEe----eeecccchHHHHHHhh-cCCCCCCCCceEE
Q 008085 123 QRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIF----GEWFNADTEAIINQSL-QTGAGPNVSDAYT 196 (578)
Q Consensus 123 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~l 196 (578)
++||||||||...++ +||.|.++|++......+...++.|.++++ .||++.....+..... ..+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999877 899999999987554444446688999999 8999877665433221 11111 22222
Q ss_pred EcCCCC----------------CCCCC----------CCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEe
Q 008085 197 INGLPG----------------PLYNC----------SAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDV 250 (578)
Q Consensus 197 iNG~~~----------------~~~~~----------~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~ 250 (578)
+|+... ..|.. -+-..|+|++++|+++++|+.|... ..+.+|.+|. ++...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC
Confidence 333210 00111 1224589999999999999999964 4556777764 33322
Q ss_pred CCCCCCceEEeEEEECCCceEEEEEEeCCCC-------CCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCccc
Q 008085 251 DAIYIKSFQTDILLITPGQTTNILLKAKPSY-------PNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTV 323 (578)
Q Consensus 251 DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~-------~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~ 323 (578)
| ...+.||+++...+...+.. .-|.||++++...... . ..+..+.|.+.....
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q--~-~~GL~G~liV~~~~~------- 904 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD--L-YSGLIGPLIVCRRPY------- 904 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH--H-HTTCEEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh--h-hccccceeEecCccc-------
Confidence 2 12567999988888776521 0158999988431100 0 012344444432210
Q ss_pred ccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCC---CC-------CCccCCC-
Q 008085 324 SIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCP---KN-------QTCQGPN- 392 (578)
Q Consensus 324 ~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~---~~-------~~~~~~~- 392 (578)
+.+..+. ...|-.+.+.. +...... .| .......
T Consensus 905 -------l~~~~~~---------------------------~d~D~~l~~~~-~d~~~~~y~~~n~~~~~~~P~~v~~~~ 949 (1065)
T 2j5w_A 905 -------LKVFNPR---------------------------RKLEFALLFLV-FDENESWYLDDNIKTYSDHPEKVNKDD 949 (1065)
T ss_dssp -----------CCC---------------------------CEEEEEEEEEE-EEGGGSTTHHHHHHHHCSCGGGCCTTC
T ss_pred -------ccccCCC---------------------------cceEEEEEEEe-ecCCcceeeccCcccccCCccccCcch
Confidence 0000000 00010011100 0000000 00 0000000
Q ss_pred ---CCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEe
Q 008085 393 ---NSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQ 469 (578)
Q Consensus 393 ---~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~ 469 (578)
......|+|||+.| ..+..+.++.|++|+|+|.
T Consensus 950 ~~~~~~~~~~~iNG~~~--------------------------------------------~~~~~~~v~~G~~vr~~l~ 985 (1065)
T 2j5w_A 950 EEFIESNKMHAINGRMF--------------------------------------------GNLQGLTMHVGDEVNWYLM 985 (1065)
T ss_dssp HHHHHHTEEEEETTBCT--------------------------------------------TCCCCCEEETTCEEEEEEE
T ss_pred hhhhccCceEEECCccC--------------------------------------------CCCccEEeCCCCEEEEEEE
Confidence 00001234444322 1234567899999999999
Q ss_pred cCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhh
Q 008085 470 DTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHIS 549 (578)
Q Consensus 470 N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d 549 (578)
|.+. ..+.||||||||.|+|++++ |.|||||.|+||++++|+|++||||.|+||||+++|++
T Consensus 986 N~g~-~~~~HpfHlHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~ 1047 (1065)
T 2j5w_A 986 GMGN-EIDLHTVHFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIH 1047 (1065)
T ss_dssp ECCS-TTCCEEEEESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHH
T ss_pred eCCC-CCcceeEEEcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHh
Confidence 9752 24789999999999998652 57999999999999999999999999999999999999
Q ss_pred ccceEEEEEecCC
Q 008085 550 WGLKMAWIVLNGN 562 (578)
Q Consensus 550 ~GMm~~~~V~~~~ 562 (578)
.|||++|.|.+.+
T Consensus 1048 ~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1048 AGMETTYTVLQNE 1060 (1065)
T ss_dssp TTCEEEEEEECCC
T ss_pred cCCcEEEEEecCc
Confidence 9999999998754
No 26
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.4e-45 Score=377.91 Aligned_cols=133 Identities=25% Similarity=0.399 Sum_probs=108.3
Q ss_pred cCceEEEEEEEEEEEeecCceeeE-EEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCcc
Q 008085 26 ASITRHYKFDIKMQNVTRLCHTKS-IITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYIT 104 (578)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~t 104 (578)
.+.+++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+++.. ++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cc
Confidence 46779999999875 2443211 22358999999999999999999999999999999999999874 599999 89
Q ss_pred ccccCCCCeEEEEEEECC------------CCcceEEecCccc------cc-cceeeeEEEeCCCCCCCCCCCCCCceeE
Q 008085 105 QCPIQTGQSYVYNFTISG------------QRGTLFWHAHISW------LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPI 165 (578)
Q Consensus 105 q~~i~PG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l 165 (578)
||+|+||++++|+|++.+ ++||||||||..+ +. .||+|+|||+++.+.. .|+|++|
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEEE
Confidence 999999999999999832 3599999999742 33 8999999999886432 3677777
Q ss_pred Eeee
Q 008085 166 IFGE 169 (578)
Q Consensus 166 ~~~d 169 (578)
+++|
T Consensus 194 ~~~d 197 (343)
T 3cg8_A 194 VFND 197 (343)
T ss_dssp EEET
T ss_pred Eccc
Confidence 7765
No 27
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=3.5e-45 Score=390.29 Aligned_cols=269 Identities=20% Similarity=0.221 Sum_probs=220.4
Q ss_pred ccccCceEEEEEEEEEEEeec-CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC--CCeeEEeecccccCCcCCCC
Q 008085 23 LAVASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP--NNISIHWHGIRQLLSGWADG 99 (578)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DG 99 (578)
..+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+++ +||
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG 96 (442)
T 2zoo_A 22 NRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGG 96 (442)
T ss_dssp CCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG
T ss_pred ccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCC
Confidence 345678899999999999995 799999999999999999999999999999999986 599999999874 688
Q ss_pred CCCccccccCCCCeEEEEEEECCCCcceEEecCccc---cc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccch
Q 008085 100 PAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW---LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADT 175 (578)
Q Consensus 100 ~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~ 175 (578)
++..+ +|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++.. +.+|+|++|+++||++...
T Consensus 97 ~~~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~ 169 (442)
T 2zoo_A 97 GAESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGE 169 (442)
T ss_dssp GGGGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSC
T ss_pred CCccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCc
Confidence 77543 69999999999998 78999999998643 33 899999999987542 2458999999999987653
Q ss_pred HHHHH--HhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCC
Q 008085 176 EAIIN--QSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAI 253 (578)
Q Consensus 176 ~~~~~--~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~ 253 (578)
..... ...........++.++|||+.++.. ..+.+++++|++|||||+|+|....+.|+|+||.|+||+.||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~ 244 (442)
T 2zoo_A 170 FGEAGLQPFDMAKAIDEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG 244 (442)
T ss_dssp TTCCEEECBCHHHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS
T ss_pred ccccccccCChhHhccCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc
Confidence 10000 0000000113568999999975321 1267999999999999999998889999999999999999999
Q ss_pred CCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 254 YIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 254 ~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
+++|..++++.|.||||+||+|+++++ |.|+++|+..... ......++++|.+..
T Consensus 245 ~~~p~~~~~~~l~pg~r~~v~v~~~~~---G~y~~~~~~~~~~----~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 245 SLKNHNVQTTLIPAGGAAIVEFKVEVP---GTFILVDHSIFRA----FNKGALAMLKVEGPD 299 (442)
T ss_dssp SCEECSBSEEEECTTEEEEEEEECCSC---EEEEEEESSTHHH----HTTSCEEEEEEESCC
T ss_pred cCCCccceEEEECCCeeEEEEEEcCCC---CeEEEEecccccc----cccCceEEEEecCCC
Confidence 999999999999999999999999986 9999999865431 123568999998765
No 28
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.2e-44 Score=360.96 Aligned_cols=239 Identities=20% Similarity=0.272 Sum_probs=196.9
Q ss_pred cccCceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCc
Q 008085 24 AVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (578)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 103 (578)
++.+.+|+|+|+|++.. .+.....++++||++|||+||+++||+|+|+|+|.|+++++|||||++++.. +||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-C
Confidence 46678999999999854 2334446678999999999999999999999999999999999999999764 99999 9
Q ss_pred cccccCCCCeEEEEEEECC------------CCcceEEecCccc------cc-cceeeeEEEeCCCCCCCCCCCCCCcee
Q 008085 104 TQCPIQTGQSYVYNFTISG------------QRGTLFWHAHISW------LR-ATVYGPLVIFPKRGVPYPFPKPYKEVP 164 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 164 (578)
+||+|+||++++|+|++++ ++||||||||.++ +. +||+|+|||+++.... .|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999853 3799999999965 23 8999999999987532 289999
Q ss_pred EEeeeecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCce
Q 008085 165 IIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHS 244 (578)
Q Consensus 165 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~ 244 (578)
|++++| +|||+.+. ..+.++++.|+++||||+|.+. ..+.|||+||.
T Consensus 152 l~l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHR 198 (276)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred EEeccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEccce
Confidence 988753 79999752 4588999999999999999997 47799999999
Q ss_pred EEEEEeCCCCC----CceEEeEEEECCCceEEEEEEeCC--CCCCcceEEEeccccCCCCCCCCcceEEEEEEec
Q 008085 245 VTVVDVDAIYI----KSFQTDILLITPGQTTNILLKAKP--SYPNATFLMSARPYATGQGTFDNSTVAGILEYEA 313 (578)
Q Consensus 245 ~~via~DG~~~----~P~~~~~l~l~pGeR~dvlv~~~~--~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~ 313 (578)
|.+++ ||... .+..+|++.|.|||++++++++++ .+ |.|+++||...-. ..+..+.+.+..
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~np--G~w~~HCH~~~H~-----~~GM~g~~~V~~ 265 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA--GAWMYHCHVQSHS-----DMGMVGLFLVKK 265 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS--EEEEEEECSHHHH-----HTTCEEEEEEEC
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCC--CeEEEECCCchHh-----hCCCeEEEEEeC
Confidence 99875 77543 246789999999999999999985 33 9999999953211 123456666653
No 29
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.2e-44 Score=367.25 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=199.4
Q ss_pred ccccccCceEEEEEEEEEEEeecCc-eeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCC
Q 008085 21 AGLAVASITRHYKFDIKMQNVTRLC-HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADG 99 (578)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG 99 (578)
..+++.+.+++|+|.+++. ++| ....++..||++|||+||+++||+|+|+|+|+|++++||||||++++.. +||
T Consensus 5 ~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG 79 (313)
T 3tas_A 5 KTAPAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDG 79 (313)
T ss_dssp CBCCCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSC
T ss_pred ccCCCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCC
Confidence 3456667889999988643 455 3455667799999999999999999999999999999999999998765 999
Q ss_pred CCCccccccCCCCeEEEEEEEC------------CCCcceEEecCccccc-------cceeeeEEEeCCCCCCCCCCCCC
Q 008085 100 PAYITQCPIQTGQSYVYNFTIS------------GQRGTLFWHAHISWLR-------ATVYGPLVIFPKRGVPYPFPKPY 160 (578)
Q Consensus 100 ~~~~tq~~i~PG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~ 160 (578)
++ .+||+|+||++++|+|++. .++||||||||..++. +||+|+|||+++.+. ..|
T Consensus 80 ~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d 153 (313)
T 3tas_A 80 TK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPD 153 (313)
T ss_dssp ST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCS
T ss_pred Cc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccc
Confidence 98 5899999999999999862 3689999999987642 799999999998753 248
Q ss_pred CceeEEeeeecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEE
Q 008085 161 KEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI 240 (578)
Q Consensus 161 ~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i 240 (578)
+|++|+++|| .+||+.+. ..+.++++.|++|||||+|++. ..+.|||
T Consensus 154 ~e~~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g~-~~hpfHl 200 (313)
T 3tas_A 154 RTHTIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHGE-YYHTFHL 200 (313)
T ss_dssp EEEEEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEE
T ss_pred ccceeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEecccc-cceeeee
Confidence 9999999986 35777542 3477999999999999999995 5679999
Q ss_pred cCceEEEEEeCCCCC---CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEec
Q 008085 241 ANHSVTVVDVDAIYI---KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEA 313 (578)
Q Consensus 241 ~gh~~~via~DG~~~---~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~ 313 (578)
+||.|++++.||... .|..+|++.|.||||++++|.+.+...-|.|+++||...-.. .+-.+++.++.
T Consensus 201 HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~-----~GM~~~f~V~~ 271 (313)
T 3tas_A 201 HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD-----MGMVGLFLVKK 271 (313)
T ss_dssp TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH-----CCCeEEEEEEC
Confidence 999999999998766 478899999999999999998875311199999999532211 23456666653
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=9.2e-44 Score=364.92 Aligned_cols=272 Identities=16% Similarity=0.181 Sum_probs=210.2
Q ss_pred ccccCceEEEEEEEEEEEeec-CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCC
Q 008085 23 LAVASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA 101 (578)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~ 101 (578)
..+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 345568899999999999987 5999999999999999999999999999999999 578999999987654456656
Q ss_pred CccccccCCCCeEEEEEEECCCCcceEEecCccc-----cc-cceeeeEEEeCCCCCCCC--C-CCCCCceeEEeeeecc
Q 008085 102 YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW-----LR-ATVYGPLVIFPKRGVPYP--F-PKPYKEVPIIFGEWFN 172 (578)
Q Consensus 102 ~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~~~--~-~~~~~e~~l~~~d~~~ 172 (578)
++++ |+||++++|+|++ .++||||||||.++ +. +||+|+|||+++++.+.+ . ..+|+|++|+++||++
T Consensus 103 ~~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 103 GLTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYI 179 (333)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECC
T ss_pred ceeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeecc
Confidence 6664 9999999999998 78999999999974 44 899999999987542211 1 1458899999999987
Q ss_pred cc--hHH---------HHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEc
Q 008085 173 AD--TEA---------IINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIA 241 (578)
Q Consensus 173 ~~--~~~---------~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~ 241 (578)
.. ... .+...... .....++.++|||+.+++. ..+.++|++|++||||++|++....+ ..++
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~ 252 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIG 252 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEET
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEEC
Confidence 31 110 00000000 0113568999999975431 14679999999988877766643333 3488
Q ss_pred CceEEEEEeCCCCCC-ce-EEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 242 NHSVTVVDVDAIYIK-SF-QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 242 gh~~~via~DG~~~~-P~-~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
+|.++|++ ||.+++ |. .++++.|.||||+||+|+++++ |+|+++||...... ..+..++++|.+..
T Consensus 253 ~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~p---G~y~~~ch~~~h~~----~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 253 GHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQP---GVYAYVNHNLIEAV----HKGATAHVLVEGEW 320 (333)
T ss_dssp CCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHHH----TTCCEEEEEEESCC
T ss_pred CCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCCC---EEEEEecChhhhHh----hCCCEEEEEEcCCC
Confidence 99999999 999986 44 4899999999999999999987 99999999753320 23567899998654
No 31
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=6.3e-44 Score=359.00 Aligned_cols=242 Identities=19% Similarity=0.257 Sum_probs=193.7
Q ss_pred cccCceEEEEEEEEEEEeecCceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCc
Q 008085 24 AVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (578)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 103 (578)
.+.+.+++|+|.+++..-.. ..+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++.+. +||++ +
T Consensus 24 ~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~ 98 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-M 98 (299)
T ss_dssp ---CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred ccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-c
Confidence 35678899999998764221 3344556799999999999999999999999999999999999998764 99997 8
Q ss_pred cccccCCCCeEEEEEEEC------------CCCcceEEecCccccc-------cceeeeEEEeCCCCCCCCCCCCCCcee
Q 008085 104 TQCPIQTGQSYVYNFTIS------------GQRGTLFWHAHISWLR-------ATVYGPLVIFPKRGVPYPFPKPYKEVP 164 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~ 164 (578)
+||+|+||++|+|+|+++ .++||||||||.+++. +||+|+|||+++.+. ..|+|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999974 2689999999987642 699999999988753 2489999
Q ss_pred EEeeeecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCce
Q 008085 165 IIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHS 244 (578)
Q Consensus 165 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~ 244 (578)
|++++| .+||+..+ ..+.++++.|+++||||+|++.. .+.|||+||.
T Consensus 174 l~~~~~-------------------------~~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~ 220 (299)
T 3t9w_A 174 VVFNDM-------------------------MINNRAHH-------DAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHR 220 (299)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCEEEEETTCEEEEEEEEESSC-CCEEEETTCC
T ss_pred eeeeee-------------------------eecCcccc-------ccccceecCCCEEEEEEEecccc-ceeeeEecce
Confidence 998765 36787642 45789999999999999999964 4689999999
Q ss_pred EEEEEeCCCCCC---ceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEec
Q 008085 245 VTVVDVDAIYIK---SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEA 313 (578)
Q Consensus 245 ~~via~DG~~~~---P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~ 313 (578)
|+++..|+.... +..+|++.|.||||++++|.+.+...-|.|+++||...-.. .+..+++.+..
T Consensus 221 F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~-----~GM~~~f~V~~ 287 (299)
T 3t9w_A 221 WLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD-----MGMAGMFLVRN 287 (299)
T ss_dssp EESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred EEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh-----cCCeEEEEEEC
Confidence 999998887663 44789999999999999997665311199999999533221 23455666553
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=3.5e-43 Score=361.27 Aligned_cols=269 Identities=20% Similarity=0.242 Sum_probs=203.9
Q ss_pred ccCceEEEEEEEEEEEeec--CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCC
Q 008085 25 VASITRHYKFDIKMQNVTR--LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY 102 (578)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~ 102 (578)
+.+.+++|+|++++..+++ ||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 3567899999999988774 599999999999999999999999999999999973 45666666655555777666
Q ss_pred ccccccCCCCeEEEEEEECCCCcceEEecCccc----cc-cceeeeEEEeCCCCCCCCC---CCCCCceeEEeeeecccc
Q 008085 103 ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPF---PKPYKEVPIIFGEWFNAD 174 (578)
Q Consensus 103 ~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~ 174 (578)
+++ |.||++++|+|++ +++||||||||.++ +. +||+|+|||+++++...+. ..+|+|++|+++||++..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 665 9999999999998 78999999999975 33 8999999999876422111 145889999999998741
Q ss_pred h--HHH---------HHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEE-EcC
Q 008085 175 T--EAI---------INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFS-IAN 242 (578)
Q Consensus 175 ~--~~~---------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~-i~g 242 (578)
. ..+ +...... .....++.++|||+.+.+. ..+.++|++|++||| +|++..+.+.|+ |++
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~g 253 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGG 253 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTC
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECC
Confidence 1 000 0000000 0013568999999986331 137899999997765 566655554444 599
Q ss_pred ceEEEEEeCCCCCCce--EEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 243 HSVTVVDVDAIYIKSF--QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 243 h~~~via~DG~~~~P~--~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
|.++|++ ||.+++|. .++++.|.||||+||+|+++++ |.|+++|+..... ...+..++++|++..
T Consensus 254 h~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~p---G~y~~~~h~~~~~----~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 254 HGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQP---GVYAYLNHNLIEA----FELGAAGHIKVEGKW 320 (336)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred cCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCCC---ceEEEEechhhcc----ccCCCeEEEEECCCC
Confidence 9999997 99999764 4689999999999999999996 9999999964321 013567899998655
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2e-42 Score=356.10 Aligned_cols=270 Identities=16% Similarity=0.214 Sum_probs=205.1
Q ss_pred cccCceEEEEEEEEEEEeecC--ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCC
Q 008085 24 AVASITRHYKFDIKMQNVTRL--CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA 101 (578)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~ 101 (578)
.+.+.+++|+|++++..++++ |..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 345688999999999988854 9999999999999999999999999999999998 77999999887654344444
Q ss_pred CccccccCCCCeEEEEEEECCCCcceEEecCccc----cc-cceeeeEEEeCCCCCC----CCCCCCCCceeEEeeeecc
Q 008085 102 YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVP----YPFPKPYKEVPIIFGEWFN 172 (578)
Q Consensus 102 ~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 172 (578)
.+++ |.||++++|+|++ .++||||||||.++ +. +||+|+|||+++++.. .+. .+|+|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 5554 9999999999998 68999999999874 33 8999999999875321 121 358899999999987
Q ss_pred c--chH---------HHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEc
Q 008085 173 A--DTE---------AIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIA 241 (578)
Q Consensus 173 ~--~~~---------~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~ 241 (578)
. ... ..+...... .....++.++|||+.+... ..+.+++++|+++||+++|.+.... ..+++
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~ 258 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALT-----GDHALTAAVGERVLVVHSQANRDTR-PHLIG 258 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBC-EEEET
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCcc-----CCCceEcCCCCEEEEEECCCCCccc-eEEec
Confidence 3 111 011100000 0013468999999976321 1488999999988777666553333 23589
Q ss_pred CceEEEEEeCCCCCC-ce-EEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 242 NHSVTVVDVDAIYIK-SF-QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 242 gh~~~via~DG~~~~-P~-~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
+|.|+|++ ||.++. |. .++++.|.||||+||+|+++++ |.|+++|+..... ...+..++++|.+..
T Consensus 259 gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~p---G~y~~~~h~~~~h----~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 259 GHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQP---GVYAYVNHNLIEA----FELGAAGHFKVTGEW 326 (340)
T ss_dssp CCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred CcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCCC---eeeEEEcCchHHH----HhCCCEEEEEECCCC
Confidence 99999997 999885 43 5899999999999999999996 9999999964211 012456889998654
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.8e-40 Score=369.36 Aligned_cols=248 Identities=17% Similarity=0.228 Sum_probs=184.4
Q ss_pred cCceEEEEEEEEEEEeecC-------------c-eeeEE--EEE----------------cCCCCCceEEEecCCEEEEE
Q 008085 26 ASITRHYKFDIKMQNVTRL-------------C-HTKSI--ITV----------------NGQFPGPRIVAREGDRLIIK 73 (578)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~~--~~~----------------NG~~pgP~i~~~~Gd~v~v~ 73 (578)
.+.+|+|.+-|++..+.-. | +-+++ ..| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 3688999999998876532 1 11121 223 45799999999999999999
Q ss_pred EEecCCCCeeEEeecccccCCcCCCCCCCcc--------ccccCCCCeEEEEEEECCC-----Cc----ceEEecCccc-
Q 008085 74 VVNHVPNNISIHWHGIRQLLSGWADGPAYIT--------QCPIQTGQSYVYNFTISGQ-----RG----TLFWHAHISW- 135 (578)
Q Consensus 74 l~N~l~~~~siH~HG~~~~~~~~~DG~~~~t--------q~~i~PG~~~~Y~~~~~~~-----~G----t~wYH~H~~~- 135 (578)
|+|.|+++++|||||++++.. +||+|+++ ||+|+||++++|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999886 9999999999999999654 57 9999999975
Q ss_pred -cc-cceeeeEEEeCCCCCCC--CCCCCCCceeEEee------eecccchHHH-HHHhhcCCCCCCCCceEEEcCCCCCC
Q 008085 136 -LR-ATVYGPLVIFPKRGVPY--PFPKPYKEVPIIFG------EWFNADTEAI-INQSLQTGAGPNVSDAYTINGLPGPL 204 (578)
Q Consensus 136 -~~-~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~-~~~~~~~g~~~~~~~~~liNG~~~~~ 204 (578)
+. +||+|+|||+++..... ..+..++|++|+++ ||+++..... +... .......++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~--~~~~~~~~~~~~iNG~~~-- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA--SSEVKNSHEFHAINGMIY-- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSS--
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC--CcchhhcCceeccCCEec--
Confidence 33 89999999999864321 12234689999999 6776543321 1110 011123468999999974
Q ss_pred CCCCCCcceeEEEecCcEEEEEEEecCCCC-eEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCCCCC
Q 008085 205 YNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPN 283 (578)
Q Consensus 205 ~~~~~~~~~~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~ 283 (578)
..|.+++++|++|||||+|++... .+.||+|||.|++++.|| ..++++.|.||||+||+|+++++
T Consensus 237 ------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~p--- 302 (647)
T 1sdd_B 237 ------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASKP--- 302 (647)
T ss_dssp ------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCSS---
T ss_pred ------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEeccc---
Confidence 237899999999999999999764 889999999999999886 57899999999999999999997
Q ss_pred cceEEEeccc
Q 008085 284 ATFLMSARPY 293 (578)
Q Consensus 284 g~y~l~~~~~ 293 (578)
|.|+++||..
T Consensus 303 G~w~~hch~~ 312 (647)
T 1sdd_B 303 GWWLLDTEVG 312 (647)
T ss_dssp EEEEEECCCH
T ss_pred eEeecccCcc
Confidence 9999999963
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.8e-41 Score=342.92 Aligned_cols=213 Identities=17% Similarity=0.252 Sum_probs=158.4
Q ss_pred EEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCC------cc--ccccCCCCeEEEEEEE
Q 008085 49 SIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY------IT--QCPIQTGQSYVYNFTI 120 (578)
Q Consensus 49 ~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~------~t--q~~i~PG~~~~Y~~~~ 120 (578)
..+++| ++|||+|++++||+|+|+|+|.++++++|||||++++.. +||++. ++ ||+|+||++++|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345678 589999999999999999999999999999999996554 666654 33 7999999999999998
Q ss_pred CCCC---------cceEEecCccc--cc-cceeeeEEEeCCCCCCC-CC-CCCCCceeEEeeeecccchHHHHHHhhcCC
Q 008085 121 SGQR---------GTLFWHAHISW--LR-ATVYGPLVIFPKRGVPY-PF-PKPYKEVPIIFGEWFNADTEAIINQSLQTG 186 (578)
Q Consensus 121 ~~~~---------Gt~wYH~H~~~--~~-~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g 186 (578)
++++ ||||||||... +. +||+|+|||+++..... +. ...|+|++|+++||.... ..
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS-
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc-
Confidence 5443 79999999876 33 89999999998753211 11 135789999999974221 00
Q ss_pred CCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCCCCceEEeEEEE
Q 008085 187 AGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLI 265 (578)
Q Consensus 187 ~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l 265 (578)
....++.++|||+.+. ..|.+++++|+++||||+|++.. ..+.||++||.|.+ || ..+|++.|
T Consensus 197 -~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l 260 (306)
T 1sdd_A 197 -NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITL 260 (306)
T ss_dssp -SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCE
T ss_pred -ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEE
Confidence 1123578999999752 24789999999999999999986 56789999999875 87 46899999
Q ss_pred CCCceEEEEEEeCCCCCCcceEEEeccc
Q 008085 266 TPGQTTNILLKAKPSYPNATFLMSARPY 293 (578)
Q Consensus 266 ~pGeR~dvlv~~~~~~~~g~y~l~~~~~ 293 (578)
.||||+||+|+++++ |.|+++|+..
T Consensus 261 ~pger~~v~~~~~~p---G~~~~hch~~ 285 (306)
T 1sdd_A 261 VSATSTTANMTVSPE---GRWTIASLIP 285 (306)
T ss_dssp ETTCCBC-----------CCCCCBCCST
T ss_pred CCCcEEEEEEEcCCC---eEEEEEeCCh
Confidence 999999999999987 9999999964
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.4e-38 Score=340.02 Aligned_cols=259 Identities=20% Similarity=0.285 Sum_probs=209.1
Q ss_pred CceEEEEEEEEEEEeec-CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC--CCeeEEeecccccCCcCCCCCCCc
Q 008085 27 SITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP--NNISIHWHGIRQLLSGWADGPAYI 103 (578)
Q Consensus 27 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~--~~~siH~HG~~~~~~~~~DG~~~~ 103 (578)
+.++.|+|++++....+ +|....+|+|||++|||+|++++||+++|+|.|.+. ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45668888887777666 588899999999999999999999999999999985 579999999862 7998765
Q ss_pred cccccCCCCeEEEEEEECCCCcceEEecCcc---ccc-cceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchHHH-
Q 008085 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHIS---WLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAI- 178 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~- 178 (578)
++ |.||++++|.|++ +++||||||||.+ .+. .||+|+|+|+++.. ++..|+|++++++||++......
T Consensus 236 ~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 54 9999999999998 6889999999974 232 89999999998753 22458899999999986532100
Q ss_pred ------HHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCC
Q 008085 179 ------INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDA 252 (578)
Q Consensus 179 ------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG 252 (578)
..... + ..++.++|||+.+++. ..+.+++++|++|||||+|++....+.|||+||.|+||+.||
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 00000 1 2358899999987431 125799999999999999999888899999999999999999
Q ss_pred CCCCc-e-EEeEEEECCCceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCC
Q 008085 253 IYIKS-F-QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (578)
Q Consensus 253 ~~~~P-~-~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (578)
.+++| . .+|++.|.||||++|+|+++++ |.|+|+|+..... ..+..++++|.+..
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~~p---G~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKIDRA---GRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECCSC---EEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred cccCCCcccccEEEECCCcEEEEEEECCCC---EEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 99854 4 5899999999999999999987 9999999964332 13457899997654
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=4.6e-40 Score=367.91 Aligned_cols=247 Identities=13% Similarity=0.146 Sum_probs=194.3
Q ss_pred cCceEEEEEEEEEEEe--ecCce---------------eeEE--EEE-cC---------------CCCCceEEEecCCEE
Q 008085 26 ASITRHYKFDIKMQNV--TRLCH---------------TKSI--ITV-NG---------------QFPGPRIVAREGDRL 70 (578)
Q Consensus 26 ~~~~~~~~l~~~~~~~--~~~g~---------------~~~~--~~~-NG---------------~~pgP~i~~~~Gd~v 70 (578)
.+.+|+|.|.|++..+ ++++. .+++ +.| |+ ++|||+|++++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4789999999999874 45542 1222 222 32 589999999999999
Q ss_pred EEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECC---------CCcceEEecCcccc--c-c
Q 008085 71 IIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISG---------QRGTLFWHAHISWL--R-A 138 (578)
Q Consensus 71 ~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~-~ 138 (578)
+|+|+|.|+++++|||||++++.... ||+++ +||+|+||++|+|+|++++ ++||||||||.+.+ . +
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999998742 59998 9999999999999999854 89999999999874 3 8
Q ss_pred ceeeeEEEeCCCCCCC--CCCCCCCceeEEeee------ecccchHHHHHHhhc-CC-------CCCCCCceEEEcCCCC
Q 008085 139 TVYGPLVIFPKRGVPY--PFPKPYKEVPIIFGE------WFNADTEAIINQSLQ-TG-------AGPNVSDAYTINGLPG 202 (578)
Q Consensus 139 Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g-------~~~~~~~~~liNG~~~ 202 (578)
||+|+|||+++..... .....++|++|++++ |+++.... .+.. .. ......+.++|||+.+
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCccC
Confidence 9999999999864321 112457899888754 44432211 0000 00 0011245689999964
Q ss_pred CCCCCCCCcceeEEEecCcEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCCC
Q 008085 203 PLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSY 281 (578)
Q Consensus 203 ~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~ 281 (578)
. ..+.+++++|++|||||+|++.. ..+.|||+||.|+|++.||. .+|++.|.||||++|+|+++++
T Consensus 365 ~-------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~p- 431 (770)
T 2r7e_B 365 D-------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSKA- 431 (770)
T ss_dssp T-------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSSC-
T ss_pred C-------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCCC-
Confidence 1 34678999999999999999865 37899999999999999973 7899999999999999999987
Q ss_pred CCcceEEEecc
Q 008085 282 PNATFLMSARP 292 (578)
Q Consensus 282 ~~g~y~l~~~~ 292 (578)
|.|+++||.
T Consensus 432 --G~w~~hcH~ 440 (770)
T 2r7e_B 432 --GIWRVECLI 440 (770)
T ss_dssp --BCCCBCCCS
T ss_pred --CceEEEecc
Confidence 999999996
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=6e-37 Score=342.33 Aligned_cols=217 Identities=19% Similarity=0.262 Sum_probs=169.0
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCC-----CCCCccccccCCCCeEEEEEEECCCCc-----
Q 008085 56 QFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWAD-----GPAYITQCPIQTGQSYVYNFTISGQRG----- 125 (578)
Q Consensus 56 ~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~D-----G~~~~tq~~i~PG~~~~Y~~~~~~~~G----- 125 (578)
.+|||+||+++||+|+|+|+|.+++++||||||+++. .+|+| |+++++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999985 45565 567788999999999999999976554
Q ss_pred ----ceEEecCccccc---cceeeeEEEeCCCCCC-CC-CCCCCCceeEEeee------ecccchHHHHHHhhcCCCC--
Q 008085 126 ----TLFWHAHISWLR---ATVYGPLVIFPKRGVP-YP-FPKPYKEVPIIFGE------WFNADTEAIINQSLQTGAG-- 188 (578)
Q Consensus 126 ----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g~~-- 188 (578)
|||||||.+.+. +||+|+|||+++.... .+ ....|+|++|++++ |+.......+.. .....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~--~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLP--NPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSS--SSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhccc--Cchhccc
Confidence 999999998764 8999999999875321 11 12458899999965 444322111100 00000
Q ss_pred -----CCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCCCCceEEeE
Q 008085 189 -----PNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDI 262 (578)
Q Consensus 189 -----~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~ 262 (578)
......++|||+.+. + .+ +++++|++|||||+|+|+. ..+.|||+||.|+|+ |..+|+
T Consensus 605 ~~~~~~~~~~~~~ING~~~~----~---~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dt 668 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFD----S---LQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDT 668 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSS----C---CC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCS
T ss_pred ccccccccCceeeecCcCCC----C---Cc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeE
Confidence 001135789999652 1 13 8999999999999998754 467999999999987 567899
Q ss_pred EEECCCceEEEEEEeCCCCCCcceEEEecccc
Q 008085 263 LLITPGQTTNILLKAKPSYPNATFLMSARPYA 294 (578)
Q Consensus 263 l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~~ 294 (578)
+.|.||||++|+|+++++ |.|+++||...
T Consensus 669 v~l~Pg~~~~v~~~ad~p---G~w~~hcH~~~ 697 (742)
T 2r7e_A 669 LTLFPFSGETVFMSMENP---GLWILGCHNSD 697 (742)
T ss_dssp SCCCCCSSEECCEECCCC---CCSCCEECCCS
T ss_pred EEECCCcEEEEEEEcCCC---eEEEEEeCCch
Confidence 999999999999999987 99999999643
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=6.2e-29 Score=248.93 Aligned_cols=235 Identities=17% Similarity=0.162 Sum_probs=164.1
Q ss_pred CceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceE
Q 008085 192 SDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (578)
Q Consensus 192 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~ 271 (578)
...+++||+. ..|+|+++.|+++++|+.|.... .+.+|+||.. ..+.||.+- ++...|.|||++
T Consensus 54 ~~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRI---------PGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 3689999985 34899999999999999999854 4589999975 457899753 234578999999
Q ss_pred EEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 008085 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (578)
Q Consensus 272 dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (578)
++.++++++ |+||++||........ ..+..+.+.+..... .+.
T Consensus 118 ~y~f~~~~~---Gt~~yH~H~~~~~~~~--~~Gl~G~liV~~~~~------------------~~~-------------- 160 (288)
T 3gdc_A 118 TYEFDATPF---GTHLYHCHQSPLAPHI--AKGLYGGFIVEPKEG------------------RPP-------------- 160 (288)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHH--HTTCEEEEEEECSSC------------------CCC--------------
T ss_pred EEEEEcCCC---ccEEEEecCcchHHHH--hCcCeEEEEEeCCcc------------------CCC--------------
Confidence 999999776 9999999963210000 113344444432110 000
Q ss_pred ccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCC
Q 008085 352 RSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPS 431 (578)
Q Consensus 352 ~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~ 431 (578)
.++.+.+.+..-.. ++ + ...-.|+|||+.|...
T Consensus 161 ---------------~d~e~~l~~~d~~~----~~---g---~~~~~~~iNG~~~~~~---------------------- 193 (288)
T 3gdc_A 161 ---------------ADDEMVMVMNGYNT----DG---G---DDNEFYSVNGLPFHFM---------------------- 193 (288)
T ss_dssp ---------------CSEEEEEEEEEECC----SS---T---TCCSEEEETTSTTHHH----------------------
T ss_pred ---------------CcceEEEEEeeEec----CC---C---CCcceEEECccccccc----------------------
Confidence 01222211110000 00 0 0112478898754100
Q ss_pred CCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCC
Q 008085 432 TPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLID 511 (578)
Q Consensus 432 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 511 (578)
...+.++.|++|+|++.|.+. ....|||||||+.|+|++.+.. +..
T Consensus 194 ---------------------~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~ 239 (288)
T 3gdc_A 194 ---------------------DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTP 239 (288)
T ss_dssp ---------------------HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSC
T ss_pred ---------------------CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCC
Confidence 123577899999999999752 1246999999999999875421 234
Q ss_pred CCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 008085 512 PVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 512 p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
+.++||+.|+||+++.|+|++++||.|+||||+++|++.|||..|+|.+
T Consensus 240 ~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 240 SEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp SEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 5799999999999999999999999999999999999999999999863
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=4e-28 Score=245.99 Aligned_cols=248 Identities=19% Similarity=0.216 Sum_probs=163.8
Q ss_pred ceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEE-EEeCCCCCCceEEeEEEECCCceE
Q 008085 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTV-VDVDAIYIKSFQTDILLITPGQTT 271 (578)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~l~pGeR~ 271 (578)
..+++||+. ..|+|+++.|+++++|+.|... ....+|+||....- .+.||.+. +....|.|||++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 689999984 3599999999999999999985 44588999875542 35788753 233578999999
Q ss_pred EEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCC-CCCCcccccccccc
Q 008085 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLP-ALNDTAFAFNYTTR 350 (578)
Q Consensus 272 dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~ 350 (578)
+..++++++ |+||+++|...... . ...+..+.|.+..... ...+ ... . ++.--
T Consensus 89 ~y~f~~~~~---Gt~wYH~H~~~~~~-~-~~~Gl~G~lIV~~~~~----------------~~~~~~~d-~----e~~l~ 142 (318)
T 3g5w_A 89 TYKFKAEPA---GTMWYHCHVNVNEH-V-TMRGMWGPLIVEPKNP----------------LPIEKTVT-K----DYILM 142 (318)
T ss_dssp EEEEECCSC---EEEEEECCSSHHHH-H-HHSCCEEEEEEECSSC----------------CHHHHTCC-E----EEEEE
T ss_pred EEEEEcCCC---EEEEEEccCChhhh-h-ccCCCEEEEEEcCCCc----------------cccccccc-c----eeEEE
Confidence 999999876 99999999621110 0 0012334444432210 0000 000 0 00000
Q ss_pred cccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCC
Q 008085 351 LRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFP 430 (578)
Q Consensus 351 l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~ 430 (578)
+......... .. .... .+. ...-.|+|||+.| |
T Consensus 143 l~dw~~~~~~-~~------------~~~~----------~~~-~~~d~~~ING~~~--~--------------------- 175 (318)
T 3g5w_A 143 LSDWVSSWAN-KP------------GEGG----------IPG-DVFDYYTINAKSF--P--------------------- 175 (318)
T ss_dssp EEEECGGGTT-CT------------TCCC----------CTT-CCCCEEEETTBCB--T---------------------
T ss_pred EEeecccccc-cc------------ccCC----------CCC-CcCcEEEEcCcCC--C---------------------
Confidence 0000000000 00 0000 000 0111478888754 1
Q ss_pred CCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCC
Q 008085 431 STPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLI 510 (578)
Q Consensus 431 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~ 510 (578)
.+..+.++.|++|+|+|.|.+. ..||||||||.|+|+++..+ .+.
T Consensus 176 ---------------------~~~~l~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~dG~-----------~~~ 220 (318)
T 3g5w_A 176 ---------------------ETQPIRVKKGDVIRLRLIGAGD---HVHAIHTHGHISQIAFKDGF-----------PLD 220 (318)
T ss_dssp ---------------------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTSCEEEEEETTE-----------EEE
T ss_pred ---------------------CCccEEeCCCCEEEEEEEeCCC---ceEEEEECCcEEEEEecCCc-----------ccC
Confidence 1223678899999999999763 58999999999999998532 123
Q ss_pred CCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhh------ccceEEEEEecCC
Q 008085 511 DPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHIS------WGLKMAWIVLNGN 562 (578)
Q Consensus 511 ~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d------~GMm~~~~V~~~~ 562 (578)
+|.++||+.|+||+++.|+|++||||.|+||||+++|++ .|||..++|....
T Consensus 221 ~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 221 KPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 567899999999999999999999999999999999998 6899999986543
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=6.4e-28 Score=247.24 Aligned_cols=247 Identities=18% Similarity=0.146 Sum_probs=159.8
Q ss_pred CceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEe---CCCCCCceEEeEEEECCC
Q 008085 192 SDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDV---DAIYIKSFQTDILLITPG 268 (578)
Q Consensus 192 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~---DG~~~~P~~~~~l~l~pG 268 (578)
...+++||+. ..|+|++++|+++|+|++|.+... ..+|.|| +.+.+. ||.+. ++...|.||
T Consensus 23 ~~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSLP-HTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEEESSSC-BCCEEET--CCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCcc---------CCCeEEEECCCEEEEEEEECCCCC-ccEEeCC--CCcCCCcccCCCCc----cccCccCCC
Confidence 3689999984 349999999999999999998543 3455544 556664 99753 234579999
Q ss_pred ceEEEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccc
Q 008085 269 QTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYT 348 (578)
Q Consensus 269 eR~dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~ 348 (578)
||+++.++++++ |+||++++...... ....+..+.+....... ..+ +.. . +. ++.
T Consensus 87 ~~~~y~f~~~~~---Gt~wyH~H~~~~~q--~~~~Gl~G~liV~p~~~------------~~~-~~~--~-d~----e~~ 141 (339)
T 2zwn_A 87 DSYTYKFKADRI---GTLWYHCHVNVNEH--VGVRGMWGPLIVDPKQP------------LPI-EKR--V-TK----DVI 141 (339)
T ss_dssp CEEEEEEECCSC---EEEEEECCSSHHHH--TTTSCCEEEEEEECSSC------------CTT-GGG--C-SE----EEE
T ss_pred CeEEEEEECCCC---EEEEEEecCCchhh--hhcCCceEeEEecCCCc------------ccc-ccc--C-Cc----eEE
Confidence 999999999876 99999998532111 11012233333332110 000 000 0 00 000
Q ss_pred cccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccC
Q 008085 349 TRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTD 428 (578)
Q Consensus 349 ~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~ 428 (578)
--+....... . ..+. . . +......-.|.|||+.+.
T Consensus 142 l~l~d~~~~~-~-~~~~-~----------~-----------g~~~~~~~~~~ING~~~~--------------------- 176 (339)
T 2zwn_A 142 MMMSTWESAV-A-DKYG-E----------G-----------GTPMNVADYFSVNAKSFP--------------------- 176 (339)
T ss_dssp EEEEEECGGG-T-TCTT-C----------C-----------CSTTSCCCEEEETTBCTT---------------------
T ss_pred EEeeheeccc-c-cccC-C----------C-----------CCCccccceEEEccccCC---------------------
Confidence 0000000000 0 0000 0 0 000001113678876431
Q ss_pred CCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCC
Q 008085 429 FPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFN 508 (578)
Q Consensus 429 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~ 508 (578)
.+.++.++.|++++|+|.|.+ ...||||||||.|+|++.... .
T Consensus 177 -----------------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~ 219 (339)
T 2zwn_A 177 -----------------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------P 219 (339)
T ss_dssp -----------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------E
T ss_pred -----------------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------e
Confidence 122467889999999999976 368999999999999998532 1
Q ss_pred CCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhh------hhccceEEEEEecC
Q 008085 509 LIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVH------ISWGLKMAWIVLNG 561 (578)
Q Consensus 509 ~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H------~d~GMm~~~~V~~~ 561 (578)
..+|.++||+.|+||+++.|+|++|+||.|++|||+++| ++.|||..+.|...
T Consensus 220 ~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 220 LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 233678999999999999999999999999999999999 88999999998654
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.94 E-value=5.9e-27 Score=233.06 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=155.9
Q ss_pred cceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCC----------
Q 008085 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS---------- 280 (578)
Q Consensus 211 ~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~---------- 280 (578)
..|+|+++.|+++++++.|... ....+|.+|..+.. +.||.. +..-.|.||+++...++++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 4599999999999999999974 55589999976643 579976 233468999999999999763
Q ss_pred CCCcceEEEeccccCCCCCC-CCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 008085 281 YPNATFLMSARPYATGQGTF-DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (578)
Q Consensus 281 ~~~g~y~l~~~~~~~~~~~~-~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (578)
...|.||.+++......... ...+..+.|....+.. . .
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--------------~---~------------------------ 145 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--------------V---L------------------------ 145 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------C---C------------------------
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCCC--------------c---c------------------------
Confidence 01288999998532100000 0112333333331110 0 0
Q ss_pred CCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccC
Q 008085 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (578)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 439 (578)
.|+.+.+.+. .|+|||+.|.
T Consensus 146 -------~drE~~l~l~---------------------~~~iNG~~~~-------------------------------- 165 (276)
T 3kw8_A 146 -------PDATHTIVFN---------------------DMTINNRKPH-------------------------------- 165 (276)
T ss_dssp -------CSEEEEEEEE---------------------TTEETTCCTT--------------------------------
T ss_pred -------cccceEEEec---------------------ccccceeccc--------------------------------
Confidence 0333433321 1678887541
Q ss_pred CCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeee
Q 008085 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (578)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~ 519 (578)
..+.+.++.|++|+|+|.|.+. +.|||||||+.|+|++. |.++.. ...+.+|||+.
T Consensus 166 ------------~~p~i~v~~G~~vri~l~N~~~---~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~ 221 (276)
T 3kw8_A 166 ------------TGPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKI 221 (276)
T ss_dssp ------------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEE
T ss_pred ------------CCCCEEEecCCEEEEEEecCCC---cceeEEEccceeEEecc--CccCCC-------cccccCCccEE
Confidence 1234688999999999999753 79999999999999753 322211 12246999999
Q ss_pred ecCCcEEEEEEEec---CceeEEEEeechhhhhccceEEEEEecCC
Q 008085 520 VPSGGWVAIRFRAD---NPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 520 v~~~~~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
|.||++..++|+++ |||.|+||||+++|++.|||..|+|.+++
T Consensus 222 v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 222 TGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp ECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 99999999999997 89999999999999999999999998764
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.94 E-value=6.6e-27 Score=235.01 Aligned_cols=220 Identities=18% Similarity=0.245 Sum_probs=151.1
Q ss_pred cceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCC----------
Q 008085 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS---------- 280 (578)
Q Consensus 211 ~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~---------- 280 (578)
+.|+|+++.|+++++++.|.... ...+|.+|..+. -+.||.++. .-.|.|||++...++++.+
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 45999999999999999999854 457899987654 357997642 1247899999999887632
Q ss_pred CCCcceEEEeccccCCCCCCC-CcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 008085 281 YPNATFLMSARPYATGQGTFD-NSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (578)
Q Consensus 281 ~~~g~y~l~~~~~~~~~~~~~-~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (578)
...|+||.+++.........+ ..+..+.|....... +
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----------------~-------------------------- 166 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----------------L-------------------------- 166 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------C--------------------------
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEecccc----------------c--------------------------
Confidence 112999999985322110000 012333333321110 0
Q ss_pred CCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccC
Q 008085 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (578)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 439 (578)
..|+.+.+.++ .|.+|++.+
T Consensus 167 ------~~d~e~~l~~~---------------------~~~~Ng~~~--------------------------------- 186 (299)
T 3t9w_A 167 ------LPKRQFTVVFN---------------------DMMINNRAH--------------------------------- 186 (299)
T ss_dssp ------CCSEEEEEEEE---------------------TTEETTCCT---------------------------------
T ss_pred ------Cccccceeeee---------------------eeeecCccc---------------------------------
Confidence 01344444321 156776533
Q ss_pred CCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeee
Q 008085 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (578)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~ 519 (578)
...+.+.++.|++|+|+|.|.+ .+.||||||||.|+|+..+.. ......+.++||+.
T Consensus 187 -----------~~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~---------~~~~~~~~~~Dtv~ 243 (299)
T 3t9w_A 187 -----------HDAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMR---------TSEYDPSPLIDIKD 243 (299)
T ss_dssp -----------TCCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSC---------CSTTCCCCEESEEE
T ss_pred -----------cccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEecccc---------cCCcCCCCceeeEE
Confidence 1134578889999999999975 378999999999999876532 22234456899999
Q ss_pred ecCCcEEE---EEEEecCceeEEEEeechhhhhccceEEEEEecCC
Q 008085 520 VPSGGWVA---IRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 520 v~~~~~~~---irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
|.||.... ++|++||||.|+|||||++|++.|||.+|+|++.+
T Consensus 244 v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 244 LNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp CCTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 99997654 55567899999999999999999999999998764
No 44
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=8e-26 Score=228.92 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=151.4
Q ss_pred cceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCC----------
Q 008085 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS---------- 280 (578)
Q Consensus 211 ~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~---------- 280 (578)
+.|+|+++.|+++++++.|.... ...+|.||..+. .+.||.... .-.|.||+++...+++..+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 45999999999999999999854 457899987654 256887541 1247899999988876532
Q ss_pred CCCcceEEEeccccCCCCCCC-CcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 008085 281 YPNATFLMSARPYATGQGTFD-NSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (578)
Q Consensus 281 ~~~g~y~l~~~~~~~~~~~~~-~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (578)
...|.||.+++.........+ ..+..+.|....... .
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--------------~---------------------------- 150 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--------------V---------------------------- 150 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------B----------------------------
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc--------------c----------------------------
Confidence 112889999985321100000 012333333331110 0
Q ss_pred CCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccC
Q 008085 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (578)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 439 (578)
..|+.+.+.+. .|++|+..+.
T Consensus 151 ------~~d~e~~l~~~---------------------d~t~Ng~~~~-------------------------------- 171 (313)
T 3tas_A 151 ------LPDRTHTIVFN---------------------DMTINNRPAH-------------------------------- 171 (313)
T ss_dssp ------CCSEEEEEEEE---------------------TTEETTCCTT--------------------------------
T ss_pred ------cccccceeecc---------------------chhcccCCcc--------------------------------
Confidence 01334433321 1667765320
Q ss_pred CCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeee
Q 008085 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (578)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~ 519 (578)
..+.+.++.|++|+|+|.|.+ .+.||||||||.|+|+..+.. ......+.++||+.
T Consensus 172 ------------~~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~---------~~~~~~~~~~Dtv~ 227 (313)
T 3tas_A 172 ------------TGPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGML---------TGPDDPSQVIDNKI 227 (313)
T ss_dssp ------------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSC---------CSTTCCCCEESEEE
T ss_pred ------------cccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCc---------cCCCCCCeeeeEEE
Confidence 123467889999999999976 378999999999999876522 11234567999999
Q ss_pred ecCCcEEEEEEEe---cCceeEEEEeechhhhhccceEEEEEecCC
Q 008085 520 VPSGGWVAIRFRA---DNPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 520 v~~~~~~~irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
|.|++...+++.+ +|||.|+|||||++|++.|||..|+|++++
T Consensus 228 l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 228 CGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp ECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eCCCcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 9999988777764 699999999999999999999999998765
No 45
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.88 E-value=2.6e-24 Score=217.26 Aligned_cols=239 Identities=12% Similarity=0.066 Sum_probs=135.6
Q ss_pred EEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCC----ceEEeEEEECCCce
Q 008085 195 YTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK----SFQTDILLITPGQT 270 (578)
Q Consensus 195 ~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----P~~~~~l~l~pGeR 270 (578)
.++||.++ |+|++++|+++|+|+.|... ..+.+|.||..+. .+.||.+.. +...+...|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCe
Confidence 34787654 89999999999999999874 5567888887742 257898652 22233567999999
Q ss_pred EEEEEEeCCCC-------CCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccc
Q 008085 271 TNILLKAKPSY-------PNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAF 343 (578)
Q Consensus 271 ~dvlv~~~~~~-------~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~ 343 (578)
++..+++++.. ..|+||+++|.....+ ....+.+ ++|....... . .. +..+....
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~-------~--~~----~~~~~~d~--- 181 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTL-------T--ED----GTQKMFEK--- 181 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCB-------C--TT----SSBSSSCC---
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCC-------C--cc----CCcCcccc---
Confidence 99999998753 1269999999522100 0122222 3333321110 0 00 00000000
Q ss_pred ccccccccccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCC
Q 008085 344 AFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNG 423 (578)
Q Consensus 344 ~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g 423 (578)
++.--+..+ ..... +.. ...-.++|||+.+..
T Consensus 182 --e~~l~~~d~-------------------d~~~~---------~~~---~~~~~~~ING~~~~~--------------- 213 (306)
T 1sdd_A 182 --QHVLMFAVF-------------------DESKS---------WNQ---TSSLMYTVNGYVNGT--------------- 213 (306)
T ss_dssp --CCCCBCCEE-------------------ETTSS---------SSC---CCCEEECSSSCCSSC---------------
T ss_pred --eEEEEEEec-------------------ccccc---------ccc---CCCcceeeCCEecCC---------------
Confidence 000000000 00000 000 011136788865410
Q ss_pred ccccCCCCCCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCC
Q 008085 424 VYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKD 503 (578)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~ 503 (578)
.+.+.++.|++++|+|.|.+. ....||||+|||.|++ .|
T Consensus 214 -----------------------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG------- 252 (306)
T 1sdd_A 214 -----------------------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH------- 252 (306)
T ss_dssp -----------------------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT-------
T ss_pred -----------------------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC-------
Confidence 112356779999999999763 2257999999999986 11
Q ss_pred CCCCCCCCCCcceeeeecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEecC
Q 008085 504 RKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 504 ~~~~~~~~p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
.++||+.|.||+.+.|+|++++||.|+||||+++|++.|||..|.|.+.
T Consensus 253 ---------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 ---------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp ---------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred ---------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 3699999999999999999999999999999999999999999999754
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=8.2e-22 Score=219.21 Aligned_cols=250 Identities=10% Similarity=0.129 Sum_probs=144.7
Q ss_pred cceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCC---c-eEEeEEEECCCceEEEEEEeCCCC---CC
Q 008085 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK---S-FQTDILLITPGQTTNILLKAKPSY---PN 283 (578)
Q Consensus 211 ~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---P-~~~~~l~l~pGeR~dvlv~~~~~~---~~ 283 (578)
..|+|++++|+++++|+.|... ....+|.||.... .+.||.+.. | ..+....|.|||+++..+++++.. +.
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 4599999999999999999985 4457888887664 578997642 2 223456899999999999998842 12
Q ss_pred c----ceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 008085 284 A----TFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (578)
Q Consensus 284 g----~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (578)
| +||.|+|.....+ ... +..+.|....... . ... +..|.. +.....-+ ..+... .+.
T Consensus 145 G~~c~T~wYHsH~~~~~q-~~~--GL~G~lIV~~~~~-------~---~~~--~~~~~~-~~e~~l~l-~~~d~~--~~w 205 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD-IHS--GLIGPLLICRKGT-------L---DKE--TNMPVD-MREFVLLF-MVFDEK--KSW 205 (647)
T ss_dssp SCSEEEEEEECCSSHHHH-HTT--TCEEEEEEECTTS-------S---CTT--SCCCSS-CCEEEEEE-EEEEGG--GSS
T ss_pred CCCceEEEEccCCCCccc-ccc--cCccCEEEeeCCC-------c---ccc--cCCCCc-ceeEEEEE-EeecCc--ccc
Confidence 7 9999999632110 111 2233332222210 0 000 011111 00000000 000000 000
Q ss_pred CCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCCCCceeccC
Q 008085 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (578)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 439 (578)
. ... ..+..+.. ... .. . ...-.+.|||+.+.
T Consensus 206 ~--~~~--~~~~~~~~-~~~-------~~-~---~~~~~~~iNG~~~~-------------------------------- 237 (647)
T 1sdd_B 206 Y--YDK--KPTRSWRR-ASS-------EV-K---NSHEFHAINGMIYN-------------------------------- 237 (647)
T ss_dssp C--CC-----------------------------CCCEEEEETTBSSC--------------------------------
T ss_pred c--ccc--Cccccccc-CCc-------ch-h---hcCceeccCCEecC--------------------------------
Confidence 0 000 00000000 000 00 0 01123567775431
Q ss_pred CCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeee
Q 008085 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (578)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~ 519 (578)
.+.+.++.|++|+|+|.|.+. ..+.||||+|||.|+|++. ++.++||+.
T Consensus 238 -------------~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~ 286 (647)
T 1sdd_B 238 -------------LPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWP 286 (647)
T ss_dssp -------------CCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEE
T ss_pred -------------CCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceEE
Confidence 123567889999999999763 2358999999999999854 235899999
Q ss_pred ecCCcEEEEEEEecCceeEEEEeechhhhhccceEEEEEec
Q 008085 520 VPSGGWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 520 v~~~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
|.||+++.|+|++++||.|+||||+++|++.|||..|.|.+
T Consensus 287 l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 287 LLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp ECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred ECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 99999999999999999999999999999999999999964
No 47
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=1.4e-20 Score=193.29 Aligned_cols=94 Identities=18% Similarity=0.244 Sum_probs=78.0
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC--cceeeeecCCcEEEEEEE
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPV--ERNTVGVPSGGWVAIRFR 531 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~v~~~~~~~irf~ 531 (578)
..+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |.+ .+++ ++||+.|.+|+.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 4578889999998887754 367899999999999852 221 2223 579999999999999999
Q ss_pred ecCceeEEEEeech-hhhhccceEEEEEecCCC
Q 008085 532 ADNPGVWFMHCHFE-VHISWGLKMAWIVLNGNL 563 (578)
Q Consensus 532 adnpG~w~~HCHil-~H~d~GMm~~~~V~~~~~ 563 (578)
+++||.|+||||++ +|++.|||..|+|.....
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999987553
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.86 E-value=3.5e-21 Score=196.15 Aligned_cols=249 Identities=14% Similarity=0.134 Sum_probs=160.0
Q ss_pred ceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceE
Q 008085 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (578)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~ 271 (578)
..+++||+. ..|+|++++|+++|||++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 679999984 34899999999999999999753 46688888863 5788642 1248999999
Q ss_pred EEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 008085 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (578)
Q Consensus 272 dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (578)
++.++++++ |+||+|||.......... +..+.+.+..... .|........ -+
T Consensus 120 ~y~f~~~~~---Gt~wyH~h~~~~~~~~~~--Gl~G~~iV~~~~~------------------~p~~d~e~~l-----~~ 171 (327)
T 1kbv_A 120 TFSFKALQP---GLYIYHCAVAPVGMHIAN--GMYGLILVEPKEG------------------LPKVDKEFYI-----VQ 171 (327)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHHHT--TCEEEEEEECTTC------------------CCCCSEEEEE-----EE
T ss_pred EEEEECCCC---eEEEEEeCCCChhhhhhc--ceEEEEEEecCCC------------------CCCCceEEEE-----Ee
Confidence 999999886 999999985321110011 2233333332110 1111110000 00
Q ss_pred ccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCC
Q 008085 352 RSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPS 431 (578)
Q Consensus 352 ~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~ 431 (578)
....... .. ....... .+.... .+.. + -.+.+||+.+..
T Consensus 172 ~d~~~~~----~~-~~~g~~~--~~~~~~--------~~~~-~--~~~~iNG~~~~~----------------------- 210 (327)
T 1kbv_A 172 GDFYTKG----KK-GAQGLQP--FDMDKA--------VAEQ-P--EYVVFNGHVGAL----------------------- 210 (327)
T ss_dssp EEECBSS----CT-TCCEEEC--BCHHHH--------HHTC-C--SEEEETTSTTTT-----------------------
T ss_pred eeeeccC----cc-ccccccc--cChhHh--------ccCC-C--ceEEEcCcccCC-----------------------
Confidence 0000000 00 0000000 000000 0000 1 135677653300
Q ss_pred CCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCC
Q 008085 432 TPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLID 511 (578)
Q Consensus 432 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 511 (578)
+ ....+.++.|++++|+|.|.+. ...|+||||||.|+|++...+. ..
T Consensus 211 ------------------~-~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~ 257 (327)
T 1kbv_A 211 ------------------T-GDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LI 257 (327)
T ss_dssp ------------------S-GGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CE
T ss_pred ------------------C-CceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CC
Confidence 0 0135688899999999999753 3689999999999999986431 22
Q ss_pred CCcceeeeecCCcEEEEEEEecCceeEEEEeechhhh-hccceEEEEEecCC
Q 008085 512 PVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVHI-SWGLKMAWIVLNGN 562 (578)
Q Consensus 512 p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H~-d~GMm~~~~V~~~~ 562 (578)
|.++|++.|.+|+.+.|.|++++||.|.+|||+.+|. ..||+..+.|....
T Consensus 258 p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 258 NENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp ECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 5689999999999999999999999999999999995 88999999997654
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=2.3e-19 Score=183.50 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=74.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC--cceeeeecCCcEEEEEEEe
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPV--ERNTVGVPSGGWVAIRFRA 532 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~v~~~~~~~irf~a 532 (578)
.+.++.|++++|++.|.+. ..|++++|+|.|+|++. |.+ ..++ ++||+.|.+|+.+.|.|++
T Consensus 226 ~l~v~~Ger~Rl~n~~~~~---~~~~h~i~~h~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPNR---DSRPHLIGGHGDLVWET--GKF-----------HNAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp CEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCT-----------TSCCEEEESBCCBCTTEEEEEEEEC
T ss_pred ceEecCCCEEEEEECCCCC---ccccEEECCCCeEEEeC--Ccc-----------cCCCccCcceEEECCCceEEEEEEc
Confidence 4688899999998877542 34455578888888862 322 1222 6899999999999999999
Q ss_pred cCceeEEEEeechhhh-hccceEEEEEecCC
Q 008085 533 DNPGVWFMHCHFEVHI-SWGLKMAWIVLNGN 562 (578)
Q Consensus 533 dnpG~w~~HCHil~H~-d~GMm~~~~V~~~~ 562 (578)
++||.|+||||++.|+ +.|||..|+|....
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 9999999999999997 99999999998754
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.82 E-value=9.6e-22 Score=220.05 Aligned_cols=87 Identities=15% Similarity=0.359 Sum_probs=77.0
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|++|+|+|.|.+. ..+.||||||||.|+|++.+ +.++||+.|.||+++.|+|++|+
T Consensus 369 ~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp CCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSS
T ss_pred CeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCC
Confidence 3567889999999999763 23589999999999998753 12899999999999999999999
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||.|+||||+++|++.|||..|.|.
T Consensus 431 pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 431 AGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp CBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCceEEEeccccccccccccccccc
Confidence 9999999999999999999999884
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.79 E-value=7.1e-18 Score=172.75 Aligned_cols=107 Identities=19% Similarity=0.234 Sum_probs=81.0
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC--cceeeeecCCcEEEEEEE
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPV--ERNTVGVPSGGWVAIRFR 531 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~v~~~~~~~irf~ 531 (578)
..+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ ..|+ +.||+.|++|+.+.+.++
T Consensus 225 ~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~pGer~dvlv~ 288 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIRGGSAGAALYT 288 (336)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCCccccceEEEECCCCcEEEEEE
Confidence 4578899999998766543 24566667999999985 3321 2232 579999999999999999
Q ss_pred ecCceeEEEEeechhhh-hccceEEEEEecCCCCC-CCCCCCCCCCC
Q 008085 532 ADNPGVWFMHCHFEVHI-SWGLKMAWIVLNGNLPN-QKLPPPPADLP 576 (578)
Q Consensus 532 adnpG~w~~HCHil~H~-d~GMm~~~~V~~~~~~~-~~~~~~p~~~~ 576 (578)
+++||.|+||||.+.|. +.||+..|.|.....+. -.....|..+|
T Consensus 289 ~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 289 FKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred cCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 99999999999999986 99999999998765332 13344455444
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.76 E-value=3.6e-18 Score=181.60 Aligned_cols=249 Identities=12% Similarity=0.114 Sum_probs=159.8
Q ss_pred ceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceE
Q 008085 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (578)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~ 271 (578)
..+++||+. ..|+|+++.|++++||+.|.... ..+.+|+||+. ..||... ...|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 679999985 34899999999999999999643 46789999965 3677531 2358999999
Q ss_pred EEEEEeCCCCCCcceEEEeccccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 008085 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (578)
Q Consensus 272 dvlv~~~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (578)
++.++++++ |+||++||......... .+..+.+.+..... .|.+... +.--+
T Consensus 110 ~y~f~~~~~---Gt~~yH~H~~~~~~~~~--~Gl~G~~iv~~~~~------------------~~~~d~e-----~~l~l 161 (442)
T 2zoo_A 110 TFNFKALNP---GLYIYHCATAPVGMHIA--NGMYGLILVEPKEG------------------LAPVDRE-----YYLVQ 161 (442)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHHHHH--TTCEEEEEEECTTC------------------CCCCSEE-----EEEEE
T ss_pred EEEEEcCCC---eEEEEecCCCChHHHHh--CccEEEEEEeCCCC------------------CCCCCce-----EEEEe
Confidence 999999886 99999997421110000 12344444442210 1111100 00001
Q ss_pred ccccCCCCCCCCCcCcceEEEEEeccCCCCCCCCCCccCCCCCCceeeeecceeeeCCChhhhhhhhcCCCCccccCCCC
Q 008085 352 RSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPS 431 (578)
Q Consensus 352 ~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ing~~~~~p~~~ll~~~~~~~~g~~~~~~~~ 431 (578)
....... .. ...... ....... .+ ...-.+.|||+.+...
T Consensus 162 ~d~~~~~---~~--~~~~~~--~~~~~~~--------~~---~~~~~~liNG~~~~~~---------------------- 201 (442)
T 2zoo_A 162 GDFYTKG---EF--GEAGLQ--PFDMAKA--------ID---EDADYVVFNGSVGSTT---------------------- 201 (442)
T ss_dssp EEECBSS---CT--TCCEEE--CBCHHHH--------HT---TCCSEEEETTSTTTTS----------------------
T ss_pred eeeeccC---cc--cccccc--cCChhHh--------cc---CCCCEEEECCCcCCCC----------------------
Confidence 1100000 00 000000 0000000 00 0001245676532000
Q ss_pred CCceeccCCCCCCCCCcccCCceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCC
Q 008085 432 TPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLID 511 (578)
Q Consensus 432 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~ 511 (578)
....+.++.|++++|+|.|.+. ...|+||+||+.|+|++...+. ..
T Consensus 202 --------------------~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~~------------~~ 247 (442)
T 2zoo_A 202 --------------------DENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGGS------------LK 247 (442)
T ss_dssp --------------------GGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CE
T ss_pred --------------------CCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCcc------------CC
Confidence 0134678899999999999653 3689999999999999885331 22
Q ss_pred CCcceeeeecCCcEEEEEEEecCceeEEEEeechhh-hhccceEEEEEecCC
Q 008085 512 PVERNTVGVPSGGWVAIRFRADNPGVWFMHCHFEVH-ISWGLKMAWIVLNGN 562 (578)
Q Consensus 512 p~~rDTv~v~~~~~~~irf~adnpG~w~~HCHil~H-~d~GMm~~~~V~~~~ 562 (578)
|.+.|++.|.||+...|.|++++||.|++|||.+.| .+.||+..|.|....
T Consensus 248 p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 248 NHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp ECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred CccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 568999999999999999999999999999999999 599999999997655
No 53
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.72 E-value=2.8e-16 Score=166.80 Aligned_cols=236 Identities=11% Similarity=0.091 Sum_probs=154.1
Q ss_pred eEEEEEEEEEEEeecCc-----------eeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEe-ecccccCCc
Q 008085 29 TRHYKFDIKMQNVTRLC-----------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHW-HGIRQLLSG 95 (578)
Q Consensus 29 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~-HG~~~~~~~ 95 (578)
.+++.|.++.-....+| ...+.+++||+. .|+|+|++| ++++||.|... ...++|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 56788888765544333 345789999986 699999999 99999999985 5688999 887654332
Q ss_pred CCCCCC-----CccccccCCCCeEEEEEEECCCCcceEEecCccccccce-e-----------eeE-EEeCCCCCCCCCC
Q 008085 96 WADGPA-----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATV-Y-----------GPL-VIFPKRGVPYPFP 157 (578)
Q Consensus 96 ~~DG~~-----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~l-iV~~~~~~~~~~~ 157 (578)
.||.+ .+....|.|||++++.+++ .+.|+||++++......|+ . .++ -+........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 78864 2456779999999999998 5689999999865432221 1 111 11111100000
Q ss_pred CCCCceeEEeeeecccchH-HHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeE
Q 008085 158 KPYKEVPIIFGEWFNADTE-AIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDEL 236 (578)
Q Consensus 158 ~~~~e~~l~~~d~~~~~~~-~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~ 236 (578)
..+.+..+..+...... ......... ..++|||+.+.. ..+.+.++.|++++|+|+|. ..+
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~-------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~H 367 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG-------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQ 367 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC-------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe-------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCc
Confidence 00000000000000000 000000000 046789997632 23568999999999999998 478
Q ss_pred EEEEcCceEEEEEeCCCCC---CceEEeEEEECCCceEEEEEEeCCCCCCcc----eEEEeccc
Q 008085 237 FFSIANHSVTVVDVDAIYI---KSFQTDILLITPGQTTNILLKAKPSYPNAT----FLMSARPY 293 (578)
Q Consensus 237 ~~~i~gh~~~via~DG~~~---~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~----y~l~~~~~ 293 (578)
.||||||.|+|++.||... +|...|++.| |+++.|.++++++ |. |++|||-.
T Consensus 368 P~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnp---g~~~g~w~~HCHil 426 (451)
T 2uxt_A 368 AFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQP---SWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSC---CBTTBCEEEEESSH
T ss_pred CeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCC---CCCCCceEEeCCch
Confidence 9999999999999999876 4778999999 9999999999987 55 99999953
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.70 E-value=1.5e-15 Score=161.00 Aligned_cols=232 Identities=15% Similarity=0.185 Sum_probs=163.5
Q ss_pred ceEEEEEEEEEEEeec------------CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCC
Q 008085 28 ITRHYKFDIKMQNVTR------------LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLS 94 (578)
Q Consensus 28 ~~~~~~l~~~~~~~~~------------~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~ 94 (578)
..+++.|.++.-.... .|.....+++||+. .|.|+|++| ++++||.|... ....+|++|......
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi 222 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI 222 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE
Confidence 4577888777644332 13455689999997 699999999 99999999985 468899999875543
Q ss_pred cCCCCCCC-----ccccccCCCCeEEEEEEECCCCcceEEecCccccc----cce--------------eeeEEEeCCC-
Q 008085 95 GWADGPAY-----ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR----ATV--------------YGPLVIFPKR- 150 (578)
Q Consensus 95 ~~~DG~~~-----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~liV~~~~- 150 (578)
. .||.+- +....|.|||+++..+++ +++|.||++|+..... .|| ....+++-..
T Consensus 223 ~-~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (439)
T 2xu9_A 223 A-ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300 (439)
T ss_dssp E-ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSS
T ss_pred e-cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCC
Confidence 2 788652 344668999999999998 5699999999743211 122 1122222111
Q ss_pred CCCCCCCCC----------CCceeEEeeeecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecC
Q 008085 151 GVPYPFPKP----------YKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPG 220 (578)
Q Consensus 151 ~~~~~~~~~----------~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 220 (578)
....+++.. ..+..+.+.-- . .+..+.|||+.+.. ..+.+.++.|
T Consensus 301 ~~~~~~p~~l~~~~~l~~~~~~r~~~l~~~----------------~---~g~~~~iNg~~~~~------~~~~~~~~~g 355 (439)
T 2xu9_A 301 PKPLPLPKALSPFPTLPAPVVTRRLVLTED----------------M---MAARFFINGQVFDH------RRVDLKGQAQ 355 (439)
T ss_dssp CCCCCCCSCCCCCCCCCCCSEEEEEEEEEE----------------G---GGTEEEETTBCCCT------TCCCEEECTT
T ss_pred CccccCcccCCCcccCCCCCcceEEEEEee----------------c---cCceEeECCEECCC------CCCceecCCC
Confidence 111111100 00011111100 0 01368899997631 2245899999
Q ss_pred cEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC-CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 221 KTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI-KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 221 ~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
++++|+|.|.+. ..+.||||||.|+|++.+|... .|...|++.|.||+++.|.++++++ |.|.+|||-
T Consensus 356 ~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnp---G~w~~HCHi 424 (439)
T 2xu9_A 356 TVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLREK---GRTVFHCHI 424 (439)
T ss_dssp CEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCSC---EEEEEEESS
T ss_pred CEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCC---CCEEEECCc
Confidence 999999999974 5679999999999999999876 5888999999999999999998888 999999995
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.61 E-value=6.2e-14 Score=150.92 Aligned_cols=256 Identities=13% Similarity=0.123 Sum_probs=162.5
Q ss_pred EEEEEEEEEEeecCce-----eeEEEEEcCCCC--------CceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcC
Q 008085 31 HYKFDIKMQNVTRLCH-----TKSIITVNGQFP--------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGW 96 (578)
Q Consensus 31 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~p--------gP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~ 96 (578)
++.|.++.-....++. ..+.+++||+.. .|+|+|++|+++++||.|... ....+|++|.......
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 5667776554443332 346789999863 289999999999999999984 4678999888655432
Q ss_pred CCCCC----CccccccCCCCeEEEEEEECCCCcceEEecCccc--------cccceeeeEEEeCCCCCCCCCCCCCCcee
Q 008085 97 ADGPA----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW--------LRATVYGPLVIFPKRGVPYPFPKPYKEVP 164 (578)
Q Consensus 97 ~DG~~----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~--------~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 164 (578)
.||.+ .+....|.|||+++..+++++.+|+||.+++... ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 78864 1334568999999999998555899999987531 1123433444432211110100000000
Q ss_pred EEeeeecccch--HHHHH-----H---hhcCCCCCCCCceEEEcCCCCCCCCC-------C--------CCcceeEEEec
Q 008085 165 IIFGEWFNADT--EAIIN-----Q---SLQTGAGPNVSDAYTINGLPGPLYNC-------S--------AKDTFKLKVKP 219 (578)
Q Consensus 165 l~~~d~~~~~~--~~~~~-----~---~~~~g~~~~~~~~~liNG~~~~~~~~-------~--------~~~~~~~~v~~ 219 (578)
..+.+...... ..... . ...-... .....|.|||+.+..-.. + ......++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 00000 0 0000000 001268899998632100 0 01235789999
Q ss_pred CcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC----CceEEeEEEE-CCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 220 GKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI----KSFQTDILLI-TPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 220 G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----~P~~~~~l~l-~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
|++++++++|......+.||||||.|+|++.+|... .|...|++.| .||+++.|.++++++ |.|.+|||.
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP---G~W~~HCHi 454 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP---GPWFFHCHI 454 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC---EEEEEEESS
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC---eeeeEecCc
Confidence 999999999544345679999999999999998752 6889999999 799999999999998 999999995
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.61 E-value=5.6e-14 Score=151.80 Aligned_cols=236 Identities=14% Similarity=0.146 Sum_probs=153.5
Q ss_pred eEEEEEcCCCC---------CceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCCC----ccccccCCCCe
Q 008085 48 KSIITVNGQFP---------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQS 113 (578)
Q Consensus 48 ~~~~~~NG~~p---------gP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~----~tq~~i~PG~~ 113 (578)
.+.+++||+.. -|+|+|++|+++++||.|... ....+|++|....... .||.+- +....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999853 189999999999999999985 4678999988655432 788642 34456899999
Q ss_pred EEEEEEECCCCcceEEecCcccc----ccceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccch--HHH--------H
Q 008085 114 YVYNFTISGQRGTLFWHAHISWL----RATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADT--EAI--------I 179 (578)
Q Consensus 114 ~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~--~~~--------~ 179 (578)
++..+++++.+|+||.+++.... ..|+..+++.........+..... +. ..+.+...... ... .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999986421 134444454433221111100000 00 00000000000 000 0
Q ss_pred H-HhhcCCCCCCCCceEEEcCCCCCCCCC-------------C--CCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCc
Q 008085 180 N-QSLQTGAGPNVSDAYTINGLPGPLYNC-------------S--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH 243 (578)
Q Consensus 180 ~-~~~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh 243 (578)
. ..............|.|||+.+..-.. . ......+.++.|++++++++| ...+.||||||
T Consensus 348 ~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 348 DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp SEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred eEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 000000000011267899998632100 0 012357899999999999999 34679999999
Q ss_pred eEEEEEeCCCCC----CceEEeEEEE-CCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 244 SVTVVDVDAIYI----KSFQTDILLI-TPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 244 ~~~via~DG~~~----~P~~~~~l~l-~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
.|+|++.+|... .|...|++.| .||+++.|.++++++ |.|.+|||-
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP---G~W~~HCHi 475 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP---GPWFLHCHI 475 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC---EEEEEEESC
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC---eeEEEeeCh
Confidence 999999998752 6889999999 799999999999998 999999995
No 57
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.59 E-value=5.5e-16 Score=130.57 Aligned_cols=90 Identities=20% Similarity=0.171 Sum_probs=71.2
Q ss_pred CCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCC--cCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecC
Q 008085 55 GQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLS--GWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAH 132 (578)
Q Consensus 55 G~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~--~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H 132 (578)
-+|++|+|++++||+|+ ++|.++.++++||||...+.. ..+||.+ .++..|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 46788999999999974 679998999999999876531 0123332 345789999999999986568999999999
Q ss_pred ccccccceeeeEEEeC
Q 008085 133 ISWLRATVYGPLVIFP 148 (578)
Q Consensus 133 ~~~~~~Gl~G~liV~~ 148 (578)
.|. .+||.|.|+|++
T Consensus 91 ~H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHR-GAGMVGKITVEG 105 (105)
T ss_dssp TTG-GGTCEEEEEECC
T ss_pred Cch-hcCCEEEEEEcC
Confidence 432 479999999974
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.55 E-value=2.2e-13 Score=144.69 Aligned_cols=242 Identities=14% Similarity=0.163 Sum_probs=160.0
Q ss_pred EEEEEEEEEEEeecCc-------------eeeEEEEEcCCCCCceEEEecCCEEEEEEEecC-CCCeeEEeecccccCCc
Q 008085 30 RHYKFDIKMQNVTRLC-------------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLLSG 95 (578)
Q Consensus 30 ~~~~l~~~~~~~~~~g-------------~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l-~~~~siH~HG~~~~~~~ 95 (578)
.+| |.++......+| ...+.+++||+. .|+|.|++|+ ++||.|.. .....+|++|......
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI- 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV- 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE-
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE-
Confidence 455 777766554444 234679999996 5999999999 99999997 5678899999875443
Q ss_pred CCCCCC-----CccccccCCCCeEEEEEEECCCCcceEEecCccccc---------cceeeeEEEeCCCCCCCC------
Q 008085 96 WADGPA-----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR---------ATVYGPLVIFPKRGVPYP------ 155 (578)
Q Consensus 96 ~~DG~~-----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~---------~Gl~G~liV~~~~~~~~~------ 155 (578)
..||.. .+....|.|||+++..+++ .+.|+|-.-++..... .....-+-+.... ...|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~ 333 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIF 333 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCC
Confidence 278632 2345679999999999998 5678877766542211 0011112222111 1111
Q ss_pred --CCCCCCceeEEeeeecccchHHHHHHhhcCCCCC---CCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEec
Q 008085 156 --FPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGP---NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINA 230 (578)
Q Consensus 156 --~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~---~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa 230 (578)
.+..+....+.++.....- ..+...+... .....++|||+.+.. ..+.++++.|++++|+|+|.
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~iNG~~~~~------~~~~~~~~~G~~v~w~l~N~ 402 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQM-----HGMMGKSEGELKIALASMFLINRKSYDL------KRIDLSSKLGVVEDWIVINK 402 (481)
T ss_dssp CCCCCCCEEEEEEEEECCSTT-----TTGGGCCHHHHHHHHHTTEEETTBCCCT------TCCCEEEETTCCEEEEEEEC
T ss_pred CCCCCCCcEEEEEEeccchhc-----ccccccccccccccccceeEECCEeCCC------CCceEEeCCCCEEEEEEEcC
Confidence 1112233344443211000 0000000000 001259999997621 34679999999999999997
Q ss_pred CCCCeEEEEEcCceEEEEEe--CCCCC---CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccc
Q 008085 231 ALNDELFFSIANHSVTVVDV--DAIYI---KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (578)
Q Consensus 231 ~~~~~~~~~i~gh~~~via~--DG~~~---~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~ 293 (578)
+ ...+.||||||.|+|++. ||... ++...|++.|.|||++.|.++++++ |.|+++||..
T Consensus 403 ~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~p---G~w~~HCHil 466 (481)
T 3zx1_A 403 S-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFK---GLRMYHCHIL 466 (481)
T ss_dssp S-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCSC---EEEEEEESSH
T ss_pred C-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCCC---eeEEEEcCCh
Confidence 6 456799999999999999 88765 4678999999999999999999888 9999999953
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.53 E-value=6.7e-13 Score=141.92 Aligned_cols=241 Identities=14% Similarity=0.136 Sum_probs=152.3
Q ss_pred eeEEEEEcCCC---------CCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCCC----ccccccCCCC
Q 008085 47 TKSIITVNGQF---------PGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQ 112 (578)
Q Consensus 47 ~~~~~~~NG~~---------pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~~----~tq~~i~PG~ 112 (578)
..+.+++||+- +-|.|+|++|+++++||.|... ....+|++|....... .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 45689999963 3479999999999999999874 5678888887654432 788641 3345689999
Q ss_pred eEEEEEEECCCCcceEEecCcccc----ccceeeeEEEeCCCCCCCCCCCCCC-ceeEEeeeecccchHHH-HHHhhcCC
Q 008085 113 SYVYNFTISGQRGTLFWHAHISWL----RATVYGPLVIFPKRGVPYPFPKPYK-EVPIIFGEWFNADTEAI-INQSLQTG 186 (578)
Q Consensus 113 ~~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~g 186 (578)
+++..+++.+..|.||.++..... ..|...+++.........|...... ... .+.+......... .......+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 999999986567999999864311 1233334444432211111100000 000 0000000000000 00000000
Q ss_pred C--------CCCCCceEEEcCCCCCCCCC-------C--------CCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCc
Q 008085 187 A--------GPNVSDAYTINGLPGPLYNC-------S--------AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH 243 (578)
Q Consensus 187 ~--------~~~~~~~~liNG~~~~~~~~-------~--------~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh 243 (578)
. .......|.|||+.+..-.. + ......+.++.|++++|.|.|......+.||+|||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0 00011368899987632100 0 01235689999999999998433345679999999
Q ss_pred eEEEEEeCCCCC----CceEEeEEEECC-CceEEEEEEeCCCCCCcceEEEecc
Q 008085 244 SVTVVDVDAIYI----KSFQTDILLITP-GQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 244 ~~~via~DG~~~----~P~~~~~l~l~p-GeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
.|.|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.+|||.
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP---G~W~~HCHi 455 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP---GPWFLHCHI 455 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC---EEEEEEESC
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC---eeEEEEecc
Confidence 999999988654 688999999997 9999999999999 999999995
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.2e-12 Score=139.60 Aligned_cols=223 Identities=11% Similarity=0.097 Sum_probs=149.2
Q ss_pred eEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCC----CccccccCCCCeEEEEEEECC
Q 008085 48 KSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQSYVYNFTISG 122 (578)
Q Consensus 48 ~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~----~~tq~~i~PG~~~~Y~~~~~~ 122 (578)
...+++||+. .|+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4688999986 699999999999999999984 4677888887654432 78864 233456899999999999853
Q ss_pred C-CcceEEecCccccc-------cceeeeEEEeCCCCCCCCCC-------------------------CCCCceeEEeee
Q 008085 123 Q-RGTLFWHAHISWLR-------ATVYGPLVIFPKRGVPYPFP-------------------------KPYKEVPIIFGE 169 (578)
Q Consensus 123 ~-~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~-------------------------~~~~e~~l~~~d 169 (578)
+ .|.||......... ....+..|++-......+.+ ..++.+.+-+.-
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57899987654221 01122223321111110000 001111111100
Q ss_pred ecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCC--------------C----CCcceeEEEecCcEEEEEEEecC
Q 008085 170 WFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNC--------------S----AKDTFKLKVKPGKTYLLRLINAA 231 (578)
Q Consensus 170 ~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~--------------~----~~~~~~~~v~~G~~~rlRliNa~ 231 (578)
.. .......+.|||+.+..-.. + ......+.++.|++++|.|.|.+
T Consensus 325 --------------~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 325 --------------DN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp --------------EE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred --------------ec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 00 00112468899997632100 0 00134689999999999999987
Q ss_pred CCCeEEEEEcCceEEEEEeCCC-----------C---------CCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEec
Q 008085 232 LNDELFFSIANHSVTVVDVDAI-----------Y---------IKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (578)
Q Consensus 232 ~~~~~~~~i~gh~~~via~DG~-----------~---------~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~ 291 (578)
. ..+.||||||.|+|++.++. + ..|...|++.|.||+.+.|.++++++ |.|.+|||
T Consensus 389 ~-~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNP---G~W~~HCH 464 (534)
T 1zpu_A 389 T-GTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNP---GVWFFHCH 464 (534)
T ss_dssp S-SCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCSC---EEEEEEEC
T ss_pred C-CCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCCC---eeEEEEeC
Confidence 4 46799999999999999853 1 24778999999999999999999998 99999999
Q ss_pred c
Q 008085 292 P 292 (578)
Q Consensus 292 ~ 292 (578)
-
T Consensus 465 i 465 (534)
T 1zpu_A 465 I 465 (534)
T ss_dssp C
T ss_pred c
Confidence 5
No 61
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.49 E-value=1.4e-12 Score=141.92 Aligned_cols=211 Identities=16% Similarity=0.158 Sum_probs=139.6
Q ss_pred eEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCC----CccccccCCCCeEEEEEEE-CCCCcceEEecCcc
Q 008085 61 RIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQSYVYNFTI-SGQRGTLFWHAHIS 134 (578)
Q Consensus 61 ~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~----~~tq~~i~PG~~~~Y~~~~-~~~~Gt~wYH~H~~ 134 (578)
+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.|||+++..+++ .+.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 4677999888655432 78854 2344668999999999998 34589999999865
Q ss_pred ccc-cc--eeeeEEEeCCCCCCCC------CCC--------------------------CCCceeEEeeeecccchHHHH
Q 008085 135 WLR-AT--VYGPLVIFPKRGVPYP------FPK--------------------------PYKEVPIIFGEWFNADTEAII 179 (578)
Q Consensus 135 ~~~-~G--l~G~liV~~~~~~~~~------~~~--------------------------~~~e~~l~~~d~~~~~~~~~~ 179 (578)
... .. ..+.|-.........+ .+. .++.+.+.++.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~---------- 353 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQ---------- 353 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEE----------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEee----------
Confidence 321 11 1222323222210000 000 00011111000
Q ss_pred HHhhcCCCCCCCCceEEEcCCCCCC----------------CC-------------CCC--------CcceeEEEecCcE
Q 008085 180 NQSLQTGAGPNVSDAYTINGLPGPL----------------YN-------------CSA--------KDTFKLKVKPGKT 222 (578)
Q Consensus 180 ~~~~~~g~~~~~~~~~liNG~~~~~----------------~~-------------~~~--------~~~~~~~v~~G~~ 222 (578)
+ .......+.|||+.+.. |. ... .....+.++.|++
T Consensus 354 ------~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 354 ------N-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ------E-EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ------c-cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 0 00001247788875421 00 000 0113588999999
Q ss_pred EEEEEEecCC-----CCeEEEEEcCceEEEEEe-CCCC----------CCceEEeEEEECCCceEEEEEEeCCCCCCcce
Q 008085 223 YLLRLINAAL-----NDELFFSIANHSVTVVDV-DAIY----------IKSFQTDILLITPGQTTNILLKAKPSYPNATF 286 (578)
Q Consensus 223 ~rlRliNa~~-----~~~~~~~i~gh~~~via~-DG~~----------~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y 286 (578)
++|.|.|.+. ...+.||||||.|+|++. +|.+ ..|...|++.|.+|+.+.|.++++++ |.|
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNP---G~W 503 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP---GVW 503 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC---EEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCC---eEE
Confidence 9999999875 346899999999999998 4653 25788999999999999999999998 999
Q ss_pred EEEecc
Q 008085 287 LMSARP 292 (578)
Q Consensus 287 ~l~~~~ 292 (578)
.+|||-
T Consensus 504 ~~HCHi 509 (552)
T 1aoz_A 504 AFHCHI 509 (552)
T ss_dssp EEEESS
T ss_pred EEEeee
Confidence 999995
No 62
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.48 E-value=2.7e-12 Score=137.27 Aligned_cols=241 Identities=12% Similarity=0.086 Sum_probs=150.8
Q ss_pred eeEEEEEcCCC--------CCceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCC----CccccccCCCCe
Q 008085 47 TKSIITVNGQF--------PGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQS 113 (578)
Q Consensus 47 ~~~~~~~NG~~--------pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~----~~tq~~i~PG~~ 113 (578)
..+.+++||+- +-|.|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 45688999973 3479999999999999999874 5678999998754432 78864 133456899999
Q ss_pred EEEEEEECCCCcceEEecCcccc----ccceeeeEEEeCCCCCCCCCCCCCCceeEEeeeecccchH-------HHHHHh
Q 008085 114 YVYNFTISGQRGTLFWHAHISWL----RATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTE-------AIINQS 182 (578)
Q Consensus 114 ~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~-------~~~~~~ 182 (578)
++..+++++..|.||-.+..... ..+..-+++.........|......... .+.+....... ......
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 99999986667999998764311 1222223333322211111000000000 00000000000 000000
Q ss_pred hc--CCCCCCCCceEEEcCCCCCCCCC-------C--------CCcceeEEEecCcEEEEEEEecC--CCCeEEEEEcCc
Q 008085 183 LQ--TGAGPNVSDAYTINGLPGPLYNC-------S--------AKDTFKLKVKPGKTYLLRLINAA--LNDELFFSIANH 243 (578)
Q Consensus 183 ~~--~g~~~~~~~~~liNG~~~~~~~~-------~--------~~~~~~~~v~~G~~~rlRliNa~--~~~~~~~~i~gh 243 (578)
.. .-........|.|||+.+..-.. + ......+.++.|++++|.|.|.+ ....+.||+|||
T Consensus 323 d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 323 DKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp SEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 00 00000012368899987631100 0 01235789999999999999532 234579999999
Q ss_pred eEEEEEeCCCCC----CceEEeEEEECC---CceEEEEEEeCCCCCCcceEEEecc
Q 008085 244 SVTVVDVDAIYI----KSFQTDILLITP---GQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 244 ~~~via~DG~~~----~P~~~~~l~l~p---GeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.+|||.
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP---G~W~~HCHi 455 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP---GPWFLHCHI 455 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC---EEEEEEESS
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC---ceEEEEeCC
Confidence 999999888643 688999999986 9999999999998 999999995
No 63
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.48 E-value=2.2e-13 Score=115.88 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=81.4
Q ss_pred EEEEEEEEEEEe-----ecCceeeEE-EEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCc
Q 008085 30 RHYKFDIKMQNV-----TRLCHTKSI-ITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (578)
Q Consensus 30 ~~~~l~~~~~~~-----~~~g~~~~~-~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 103 (578)
++|.+.+..... ...|..... .+||++|++|.|++++||+|+++++|.... +||+..+.. |+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc---
Confidence 456666665433 234555555 489999999999999999999999999865 566654421 22
Q ss_pred cccccCCCCeEEEEEEECCCCcceEEecCccccccceeeeEEEeC
Q 008085 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFP 148 (578)
Q Consensus 104 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 148 (578)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3679999999999996 899999999998876666999999964
No 64
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.48 E-value=1.7e-12 Score=137.81 Aligned_cols=252 Identities=10% Similarity=0.118 Sum_probs=158.4
Q ss_pred EEEEEEEEEEEeecCc--------------eeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEe-ecccccC
Q 008085 30 RHYKFDIKMQNVTRLC--------------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHW-HGIRQLL 93 (578)
Q Consensus 30 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~-HG~~~~~ 93 (578)
.++.|.++.-....+| ...+.+++||+. .|.+.+ +|+++++||.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4677888765544333 234679999986 588876 67899999999874 5677887 6765332
Q ss_pred CcCCCCCC-----CccccccCCCCeEEEEEEECCCCcceEEecCccccccce-----ee---eEEEeC-----CCCCC--
Q 008085 94 SGWADGPA-----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATV-----YG---PLVIFP-----KRGVP-- 153 (578)
Q Consensus 94 ~~~~DG~~-----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl-----~G---~liV~~-----~~~~~-- 153 (578)
.. .||.+ .++...|.|||+++..+++ .+.++|+.-+..... .|+ .. .+-|.+ ....+
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 305 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDT 305 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcc
Confidence 22 78843 2345679999999999998 567788776543211 111 00 111221 11111
Q ss_pred -CCC---CC----CCCceeEEeeeec-ccchHHHHHHhh---cCCC----------CC-----------CCCceEEEcCC
Q 008085 154 -YPF---PK----PYKEVPIIFGEWF-NADTEAIINQSL---QTGA----------GP-----------NVSDAYTINGL 200 (578)
Q Consensus 154 -~~~---~~----~~~e~~l~~~d~~-~~~~~~~~~~~~---~~g~----------~~-----------~~~~~~liNG~ 200 (578)
.++ +. ..+++.+.+.... ......++..+. ..+. .. .....++|||+
T Consensus 306 L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 306 LSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred cccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 001 11 1133344332100 000001111000 0000 00 01124799999
Q ss_pred CCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCc---eEEeEEEECCCceEEEEEEe
Q 008085 201 PGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKS---FQTDILLITPGQTTNILLKA 277 (578)
Q Consensus 201 ~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P---~~~~~l~l~pGeR~dvlv~~ 277 (578)
.+.. ..+.++++.|+++||+|+|.+....+.||||||.|+|++.||....| ...|++.|. |+++.|+|+|
T Consensus 386 ~~~~------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f 458 (488)
T 3od3_A 386 AFDM------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKF 458 (488)
T ss_dssp CCCT------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECB
T ss_pred eCCC------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEe
Confidence 8631 34678999999999999999966678999999999999999987743 478999999 9999999999
Q ss_pred CCCC-CCcceEEEeccc
Q 008085 278 KPSY-PNATFLMSARPY 293 (578)
Q Consensus 278 ~~~~-~~g~y~l~~~~~ 293 (578)
+.+. ..|.|++|||..
T Consensus 459 ~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 459 NHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CSCCCGGGCEEEEESSH
T ss_pred ccCCCCCCCEEEeCCch
Confidence 7642 127999999953
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.46 E-value=8.7e-12 Score=135.69 Aligned_cols=241 Identities=10% Similarity=0.054 Sum_probs=147.5
Q ss_pred eeEEEEEcCCCC--------CceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCC----CccccccCCCCe
Q 008085 47 TKSIITVNGQFP--------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQS 113 (578)
Q Consensus 47 ~~~~~~~NG~~p--------gP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~----~~tq~~i~PG~~ 113 (578)
....+++||+.. -|+|.|++|+++++||.|... ....+|++|....... .||.+ .+....|.|||+
T Consensus 194 ~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR 272 (559)
T 2q9o_A 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQR 272 (559)
T ss_dssp CBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCE
T ss_pred ccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEE
Confidence 356789999873 379999999999999999985 4678999988654432 78865 234456899999
Q ss_pred EEEEEEECCCCcceEEecCc--cc---cc-cce-eeeEEEeCCCCCCCCCCC----CC----CceeEE-eeeecccchH-
Q 008085 114 YVYNFTISGQRGTLFWHAHI--SW---LR-ATV-YGPLVIFPKRGVPYPFPK----PY----KEVPII-FGEWFNADTE- 176 (578)
Q Consensus 114 ~~Y~~~~~~~~Gt~wYH~H~--~~---~~-~Gl-~G~liV~~~~~~~~~~~~----~~----~e~~l~-~~d~~~~~~~- 176 (578)
++..+++++..|.||..... .. .. ... .+.|-...... ..|... .+ .+..+. +.........
T Consensus 273 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 273 YDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTC
T ss_pred EEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCccc
Confidence 99999985568999998775 21 11 111 22222222111 111000 00 000000 0000000000
Q ss_pred --HHHHHhhc-CCCCCCCCceEEEcCCCCCCCCCC-------------CCcceeEEEecCcEEEEEEEecCC----CCeE
Q 008085 177 --AIINQSLQ-TGAGPNVSDAYTINGLPGPLYNCS-------------AKDTFKLKVKPGKTYLLRLINAAL----NDEL 236 (578)
Q Consensus 177 --~~~~~~~~-~g~~~~~~~~~liNG~~~~~~~~~-------------~~~~~~~~v~~G~~~rlRliNa~~----~~~~ 236 (578)
........ ..........+.|||+.+..-... ......+.++.++.+++.++|... ...+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~H 431 (559)
T 2q9o_A 352 VKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 431 (559)
T ss_dssp CCCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCE
T ss_pred ccceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCC
Confidence 00000000 000011224789999976321000 001234778777666666666643 5678
Q ss_pred EEEEcCceEEEEEeCC---------CCC------------CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 237 FFSIANHSVTVVDVDA---------IYI------------KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 237 ~~~i~gh~~~via~DG---------~~~------------~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
.||||||.|+|++.++ ... .|...|++.|.+|+++.|.++++++ |.|++|||-
T Consensus 432 P~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNP---G~W~~HCHi 505 (559)
T 2q9o_A 432 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNP---GAWLFHCHI 505 (559)
T ss_dssp EEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSC---EEEEEEECC
T ss_pred cEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCC---eeEEEEecc
Confidence 9999999999999987 321 4678999999999999999999998 999999995
No 66
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.45 E-value=1.1e-11 Score=135.21 Aligned_cols=229 Identities=14% Similarity=0.123 Sum_probs=145.1
Q ss_pred eEEEEEcCCCCCceEEEecCCEEEEEEEecC-CCCeeEEeecc---------cccCCcCCCCCCC-----cc------cc
Q 008085 48 KSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGI---------RQLLSGWADGPAY-----IT------QC 106 (578)
Q Consensus 48 ~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l-~~~~siH~HG~---------~~~~~~~~DG~~~-----~t------q~ 106 (578)
.+.+++||+. .|.|.|++| ++++||.|.. .....+++.|. .+.. .||.+- +. ..
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~l 328 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPVL 328 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSSE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccEE
Confidence 4678999996 699999999 9999999997 46678888775 2222 688541 22 46
Q ss_pred ccCCCCeEEEEEEECCCCcc-eEEecCccccccc-----------eeeeEEEeCCC-CCCCCCCCC----------C--C
Q 008085 107 PIQTGQSYVYNFTISGQRGT-LFWHAHISWLRAT-----------VYGPLVIFPKR-GVPYPFPKP----------Y--K 161 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt-~wYH~H~~~~~~G-----------l~G~liV~~~~-~~~~~~~~~----------~--~ 161 (578)
.|.|||+++.-+++.+.+|+ ++..........| ..--+.|..+. ......+.. + .
T Consensus 329 ~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~ 408 (612)
T 2g23_A 329 SAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPH 408 (612)
T ss_dssp EECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCC
T ss_pred EECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccc
Confidence 78999999999998655675 6666543211111 11124454332 111111100 0 0
Q ss_pred -ceeEEee------------eecccc--hHHHHHHhhcCC-----CCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCc
Q 008085 162 -EVPIIFG------------EWFNAD--TEAIINQSLQTG-----AGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGK 221 (578)
Q Consensus 162 -e~~l~~~------------d~~~~~--~~~~~~~~~~~g-----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~ 221 (578)
...+++. -|.... ..... .....+ ........+.|||+.+. ..+.++++.|+
T Consensus 409 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G~ 480 (612)
T 2g23_A 409 GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV-QVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEGT 480 (612)
T ss_dssp EEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred ceeEEeeccccccccccccceeecccccccccc-ccccccceeeeccCCceeEEEECCccCC-------CCCceEecCCC
Confidence 1122221 010000 00000 000000 00011246889999763 34789999999
Q ss_pred EEEEEEEecCCCCeEEEEEcCceEEEEEeCCC------------------------CC---CceEEeEEEECCCceEEEE
Q 008085 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAI------------------------YI---KSFQTDILLITPGQTTNIL 274 (578)
Q Consensus 222 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~------------------------~~---~P~~~~~l~l~pGeR~dvl 274 (578)
+++|+|+|.+ ...+.||||+|.|+|++.+|. .. ++...|++.|.|||++.|.
T Consensus 481 ~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~ 559 (612)
T 2g23_A 481 HEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEE
Confidence 9999999998 456799999999999987531 11 2347899999999999999
Q ss_pred EEeC-CCCCCcceEEEeccc
Q 008085 275 LKAK-PSYPNATFLMSARPY 293 (578)
Q Consensus 275 v~~~-~~~~~g~y~l~~~~~ 293 (578)
++++ .+ |.|++|||..
T Consensus 560 ~~~~~~p---G~w~~HCHil 576 (612)
T 2g23_A 560 GKFDGAY---GRFMYHCHLL 576 (612)
T ss_dssp EECCSCC---EEEEEEESSH
T ss_pred EEeCCCC---ccEEEEeCch
Confidence 9999 55 9999999963
No 67
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.44 E-value=2.3e-12 Score=136.47 Aligned_cols=228 Identities=14% Similarity=0.098 Sum_probs=152.7
Q ss_pred EEEEEEEEEEEeec-------------CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEe--ec---cc
Q 008085 30 RHYKFDIKMQNVTR-------------LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHW--HG---IR 90 (578)
Q Consensus 30 ~~~~l~~~~~~~~~-------------~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~--HG---~~ 90 (578)
+++.|.++.-.... .|...+.+++||+. .|+|.|++| ++++||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 67777777654332 12345688999986 599999999 99999999984 5688999 76 43
Q ss_pred ccCCcCCCCCCC-----ccccccCCCCeEEEEEEECCCCcceEEecCccccc-c---ce----------eeeE--EEeCC
Q 008085 91 QLLSGWADGPAY-----ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-A---TV----------YGPL--VIFPK 149 (578)
Q Consensus 91 ~~~~~~~DG~~~-----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~---Gl----------~G~l--iV~~~ 149 (578)
.... ..||.+- +....|.|||+++..+++ . .|.||..++..... . ++ ...+ .+...
T Consensus 216 ~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLI-AVDQGFLARPIEVRALFLAPAERAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEE-EETTEEEEEEEEESCEEECTTCEEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEE-EeCCCccCCceEeceEEECCcceEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 3222 2788641 334568999999999998 4 57899987753211 0 01 1112 22111
Q ss_pred CCC--CCCC---C----CCCCceeEEeeeecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEE-Eec
Q 008085 150 RGV--PYPF---P----KPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLK-VKP 219 (578)
Q Consensus 150 ~~~--~~~~---~----~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~-v~~ 219 (578)
... +..+ + ....+..+.+.. + ...|.|||+.+.. ..+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWNA------SNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCCT------TCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCCC------CCCceeccCC
Confidence 110 0000 0 001112222210 0 1258999998632 235567 899
Q ss_pred CcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC------------Cc---eEEeEEEECCCceEEEEEEeC---CCC
Q 008085 220 GKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI------------KS---FQTDILLITPGQTTNILLKAK---PSY 281 (578)
Q Consensus 220 G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~------------~P---~~~~~l~l~pGeR~dvlv~~~---~~~ 281 (578)
|++++|+|.|.+....+.||||||.|+|++.+|... .| ...|++.|.||+++.|.++|. ..
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ad- 424 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRG- 424 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTT-
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCC-
Confidence 999999999998445679999999999999999763 23 578999999999999998887 44
Q ss_pred CCcceEEEecc
Q 008085 282 PNATFLMSARP 292 (578)
Q Consensus 282 ~~g~y~l~~~~ 292 (578)
..|.+|||-
T Consensus 425 --npw~~HCHi 433 (448)
T 3aw5_A 425 --QLFPFHCHN 433 (448)
T ss_dssp --CEEEEEESS
T ss_pred --CcEEEEcCC
Confidence 239999995
No 68
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.39 E-value=1.1e-12 Score=117.62 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=70.8
Q ss_pred ceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCC------CCcc-ccccCCCC--eEE
Q 008085 45 CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGP------AYIT-QCPIQTGQ--SYV 115 (578)
Q Consensus 45 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~------~~~t-q~~i~PG~--~~~ 115 (578)
+.....+.++|. ++|+|+|++||+|+++|+|... ...|.+.+...+..+.+.. ++.. ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444555666776 6799999999999999999733 3456666665444332210 0000 02689999 999
Q ss_pred EEEEECCCCcceEEecCccccc-cceeeeEEEe
Q 008085 116 YNFTISGQRGTLFWHAHISWLR-ATVYGPLVIF 147 (578)
Q Consensus 116 Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 147 (578)
|.|++ ++|+||||||..+.. +||.|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99995 899999999986665 8999999984
No 69
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.34 E-value=1.4e-11 Score=132.92 Aligned_cols=244 Identities=14% Similarity=0.100 Sum_probs=147.9
Q ss_pred EEEEEEEEEEEeecCc-----------eeeEEEEEcCCCCCceEEEecCCEEEEEEEecCC-CCeeEEeec-------cc
Q 008085 30 RHYKFDIKMQNVTRLC-----------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHG-------IR 90 (578)
Q Consensus 30 ~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG-------~~ 90 (578)
.++.|.++.-....+| ...+.+++||+. .|.|.|+.| ++++||.|... ....++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 4456666655444333 235679999985 799999985 99999999984 456889876 22
Q ss_pred ccCCcCCCCCC-----CccccccCCCCeEEEEEEECCCCc-ceEEecCccccc--------cceeeeEEEeCCCCC----
Q 008085 91 QLLSGWADGPA-----YITQCPIQTGQSYVYNFTISGQRG-TLFWHAHISWLR--------ATVYGPLVIFPKRGV---- 152 (578)
Q Consensus 91 ~~~~~~~DG~~-----~~tq~~i~PG~~~~Y~~~~~~~~G-t~wYH~H~~~~~--------~Gl~G~liV~~~~~~---- 152 (578)
.... ..||.. .+....|.|||+++..+++++.+| +||......... ....+.+-+......
T Consensus 250 ~~vI-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FKVI-ASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EEEE-EETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EEEE-EeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 2211 278752 234567899999999999855578 588765321100 001122222211110
Q ss_pred CCCCCCCCCceeEEeeeecccchHHHHHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCC
Q 008085 153 PYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAAL 232 (578)
Q Consensus 153 ~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~ 232 (578)
....+....... ..+- ... ....... + .....++|||+.+... .....++++.|++++|.|.|.+.
T Consensus 329 ~~~~P~~L~~~~--~p~~-~~~---~~~~~~~-~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~ 394 (534)
T 3abg_A 329 TSVVPANLRDVP--FPSP-TTN---TPRQFRF-G---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGN 394 (534)
T ss_dssp CCCCCCCCCCCS--CCCC-CCC---CCEEEEC-S---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSS
T ss_pred CCCCccccccCC--CCCC-ccc---cceEEEE-e---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCC
Confidence 000000000000 0000 000 0000000 0 0113578999976211 11234689999999999999986
Q ss_pred CCeEEEEEcCceEEEEEe-CCC---CCCc---eEEeEEEECCCceEEEEEE-eCCCCCCcceEEEeccc
Q 008085 233 NDELFFSIANHSVTVVDV-DAI---YIKS---FQTDILLITPGQTTNILLK-AKPSYPNATFLMSARPY 293 (578)
Q Consensus 233 ~~~~~~~i~gh~~~via~-DG~---~~~P---~~~~~l~l~pGeR~dvlv~-~~~~~~~g~y~l~~~~~ 293 (578)
...+.||||||.|+|++. +|. ...+ ...|++.|.||+++.|.+. ++++ |.|.+|||-.
T Consensus 395 ~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnp---G~w~~HCHil 460 (534)
T 3abg_A 395 GWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFP---GVYMFHCHNL 460 (534)
T ss_dssp SCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCC---EEEEEEESCH
T ss_pred CCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCC---ccEEEecChH
Confidence 557799999999999999 674 1112 4689999999999999999 5666 9999999953
No 70
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.32 E-value=2.1e-11 Score=131.50 Aligned_cols=218 Identities=12% Similarity=0.080 Sum_probs=138.8
Q ss_pred eeEEEEEcCCCCCceEEEecCCEEEEEEEecCCC-CeeEEeecc-cccCCcCCCCCC-----CccccccCCCCeEEEEEE
Q 008085 47 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-NISIHWHGI-RQLLSGWADGPA-----YITQCPIQTGQSYVYNFT 119 (578)
Q Consensus 47 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-~~siH~HG~-~~~~~~~~DG~~-----~~tq~~i~PG~~~~Y~~~ 119 (578)
..+.+++||+. .|.|.++.| ++++||.|.... ...+|+.|. ..... ..||.+ .+....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQI-GSDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEE-ccCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34678999996 699999885 999999999854 578999887 43322 278843 134466899999999999
Q ss_pred ECCCCcceEE-ecCcc--ccc-cce-eeeEEEeCCC--C----CCCC--CCC--------CCCceeEEeeeecccchHHH
Q 008085 120 ISGQRGTLFW-HAHIS--WLR-ATV-YGPLVIFPKR--G----VPYP--FPK--------PYKEVPIIFGEWFNADTEAI 178 (578)
Q Consensus 120 ~~~~~Gt~wY-H~H~~--~~~-~Gl-~G~liV~~~~--~----~~~~--~~~--------~~~e~~l~~~d~~~~~~~~~ 178 (578)
+++.+|.++. ..-.. ... ... ...+-..... . ...| +.. ...+..+.+...
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~-------- 377 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT-------- 377 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE--------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee--------
Confidence 8554677332 21111 000 011 1122222111 0 0111 000 001111222110
Q ss_pred HHHhhcCCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCC-----
Q 008085 179 INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAI----- 253 (578)
Q Consensus 179 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~----- 253 (578)
.. ......++|||+.+. ....+.++.|++++|+|.|.+. ..+.||||||.|+|++.+|.
T Consensus 378 ------~~--~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 378 ------QD--EYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp ------EC--TTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred ------cC--CCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccc
Confidence 00 001135789999762 2245688999999999999884 46799999999999998761
Q ss_pred ----------CC------CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEeccc
Q 008085 254 ----------YI------KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (578)
Q Consensus 254 ----------~~------~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~~ 293 (578)
.. ++...|++.|.||+++.|.++++..+ |.|.+|||-.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnp--G~w~~HCHil 495 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYS--GRYVWHCHAL 495 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCC--EEEEEEESCH
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCC--CCEEEEcCCh
Confidence 10 23478999999999999999995433 9999999953
No 71
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.32 E-value=5.8e-12 Score=128.56 Aligned_cols=101 Identities=22% Similarity=0.319 Sum_probs=81.5
Q ss_pred EEEcCCC--CCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCC--------CccccccCCCCeEEEEEEE
Q 008085 51 ITVNGQF--PGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA--------YITQCPIQTGQSYVYNFTI 120 (578)
Q Consensus 51 ~~~NG~~--pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~--------~~tq~~i~PG~~~~Y~~~~ 120 (578)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||...... .+|.. ......|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 5899986 4689999999999999999999999999999874332 23321 1123568999999999996
Q ss_pred --CCCCcceEEecCccccc-cceeeeEEEeCCCCCC
Q 008085 121 --SGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVP 153 (578)
Q Consensus 121 --~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~ 153 (578)
++.+|+|+||||..... .||.|.++|.+++...
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~ 311 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 311 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCC
Confidence 26799999999987655 8999999999876543
No 72
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=3.5e-12 Score=136.91 Aligned_cols=96 Identities=19% Similarity=0.189 Sum_probs=76.2
Q ss_pred CceeeEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCC
Q 008085 44 LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQ 123 (578)
Q Consensus 44 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~ 123 (578)
++....++++|++||+|+|++++||+|+++|+|.+...-. +||+.++. .|+. ..+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv~----~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGVA----MEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTEE----EEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCcc----eeeCCCCeEEEEEEC-CC
Confidence 3577889999999999999999999999999998653211 46666543 2332 679999999999997 89
Q ss_pred CcceEEecCcc-c-cccceeeeEEEeCCC
Q 008085 124 RGTLFWHAHIS-W-LRATVYGPLVIFPKR 150 (578)
Q Consensus 124 ~Gt~wYH~H~~-~-~~~Gl~G~liV~~~~ 150 (578)
+|+||||||.. + ...||.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 2 226999999999764
No 73
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.24 E-value=1.9e-11 Score=102.43 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=63.3
Q ss_pred cCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc
Q 008085 54 NGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (578)
Q Consensus 54 NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (578)
+..|..+.|++++||+|+ ++|..+.++++|+++. +||.....+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445667999999999965 5699888999999862 3555444455689999998887 479999999998
Q ss_pred cccccceeeeEEEe
Q 008085 134 SWLRATVYGPLVIF 147 (578)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (578)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 75 999999984
No 74
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.21 E-value=1.8e-09 Score=116.94 Aligned_cols=237 Identities=10% Similarity=0.026 Sum_probs=145.6
Q ss_pred eEEEEEcCCCC----------------CceEEEecCCEEEEEEEecCC-CCeeEEeecccccCCcCCCCCC----Ccccc
Q 008085 48 KSIITVNGQFP----------------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQC 106 (578)
Q Consensus 48 ~~~~~~NG~~p----------------gP~i~~~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DG~~----~~tq~ 106 (578)
.+.+++||+-. .++|.|++|+++++||.|... ....+|++|....... .||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 45688999742 379999999999999999985 4568999988755432 78865 23345
Q ss_pred ccCCCCeEEEEEEECCCCcceEEecCccc-----cccceeeeEEEeCCCCCCCCCCCC--CCceeEEeee--ecccch--
Q 008085 107 PIQTGQSYVYNFTISGQRGTLFWHAHISW-----LRATVYGPLVIFPKRGVPYPFPKP--YKEVPIIFGE--WFNADT-- 175 (578)
Q Consensus 107 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~~Gl~G~liV~~~~~~~~~~~~~--~~e~~l~~~d--~~~~~~-- 175 (578)
.|.|||+++..+++++..|.||-...... ...+..-+|+.........|-... +.+. .+.+ ......
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 68999999999998667899999987642 111222233333221111111000 0000 0000 000000
Q ss_pred HHHHHHh-----hcCCCCCCCCceEEEcCCCCCCC-CC-------CC-----CcceeEEE----ecCcEEEEEEEecCC-
Q 008085 176 EAIINQS-----LQTGAGPNVSDAYTINGLPGPLY-NC-------SA-----KDTFKLKV----KPGKTYLLRLINAAL- 232 (578)
Q Consensus 176 ~~~~~~~-----~~~g~~~~~~~~~liNG~~~~~~-~~-------~~-----~~~~~~~v----~~G~~~rlRliNa~~- 232 (578)
..+.... ..-+ ....-.+.|||..+..- .. ++ ...-.+.+ +.|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 0000000 0000 01123577899875310 00 00 01112344 359999999999872
Q ss_pred CCeEEEEEcCceEEEEEeCCC------------CCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 233 NDELFFSIANHSVTVVDVDAI------------YIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 233 ~~~~~~~i~gh~~~via~DG~------------~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
...+.||+|||.|.|++.+.+ +..|...|++.+.||+.+.|.++++++ |.|.+|||-
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP---G~W~~HCHi 528 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP---GSWLLHCHI 528 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC---EEEEEEECS
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC---eeeEEEECc
Confidence 247899999999999998432 125788999999999999999999999 999999995
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.16 E-value=4.4e-11 Score=105.69 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=71.5
Q ss_pred eEEEecCCCEEEEEEecCCCCCCC-CCCeeecCCceEEEE------ecCC---CCCCCCCCCCCCCCCCCcceeeeecCC
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAE-SHPLHLHGFNFFVIG------QGFG---NYDPSKDRKNFNLIDPVERNTVGVPSG 523 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~~p~~rDTv~v~~~ 523 (578)
..+.++.|++|+|++.|.+. . .|.||+|+....+.. ...+ .+.+. -....++||..|.||
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSA---VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCCS---SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCCC---CCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCC
Confidence 35788999999999999653 5 799999986531100 0000 11110 012357899999999
Q ss_pred cEEEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 008085 524 GWVAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 524 ~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
+...+.|++++||.|.||||+..|.+ ||+..+.|+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999884
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.09 E-value=2.3e-10 Score=95.81 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=65.7
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEe-
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRA- 532 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~a- 532 (578)
+.+.++.|++|+|+ |.. ...|++|+||..+... . |. + .+...+++..+.||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~-----~------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE-----L------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH-----H------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc-----c------cccccccccccCCCCeEEEEEecC
Confidence 35788999999874 643 3689999999866331 0 00 0 00112578899999999999998
Q ss_pred cCceeEEEEeechhhhhccceEEEEEec
Q 008085 533 DNPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 533 dnpG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
+.||.|.|||| .|...||+..+.|++
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 79999999999 799999999999863
No 77
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.07 E-value=6.9e-09 Score=114.74 Aligned_cols=232 Identities=12% Similarity=0.066 Sum_probs=134.2
Q ss_pred eeEEEEEcCCCCCceEEEecCCEEEEEEEecC-CCCeeEEeecc---------cccCCcCCCCCC-----------Cccc
Q 008085 47 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGI---------RQLLSGWADGPA-----------YITQ 105 (578)
Q Consensus 47 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l-~~~~siH~HG~---------~~~~~~~~DG~~-----------~~tq 105 (578)
....+++||+. .|.+.++. .++|+||.|.. .....+.+-|. .+.. .||.. .++.
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCcccccE
Confidence 34678899986 69998865 58999999987 44556666443 2332 68732 1234
Q ss_pred cccCCCCeEEEEEEECCCCcceEEecCccccc--------cce--ee--eEEEeCCCC-CCCCCC--------C----CC
Q 008085 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR--------ATV--YG--PLVIFPKRG-VPYPFP--------K----PY 160 (578)
Q Consensus 106 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~--------~Gl--~G--~liV~~~~~-~~~~~~--------~----~~ 160 (578)
..|.|||+++.-+++++..|.+|+-....... .+. .. .+.+..... .....+ . ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 56899999999999865566665533221100 111 11 112222111 000000 0 00
Q ss_pred Ccee-EEeeeecccc-------------hHHHHHHhhc-----CCCCCCCCceEEEcCCCCCCCCCCCCcceeEEEecCc
Q 008085 161 KEVP-IIFGEWFNAD-------------TEAIINQSLQ-----TGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGK 221 (578)
Q Consensus 161 ~e~~-l~~~d~~~~~-------------~~~~~~~~~~-----~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~ 221 (578)
.... ..+..-.... .......... ..........+.+||+.+. ....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-------DGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-------CCcceEeCCCC
Confidence 0011 1111000000 0000000000 0001112345677877542 34668899999
Q ss_pred EEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC---------------------------CceEEeEEEECCCceEEEE
Q 008085 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAIYI---------------------------KSFQTDILLITPGQTTNIL 274 (578)
Q Consensus 222 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---------------------------~P~~~~~l~l~pGeR~dvl 274 (578)
+++|.|.|.+.. .+.||||||.|+|++.+|... ++...|++.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 999999999854 569999999999999876421 2234799999999999999
Q ss_pred EEeCCCCCCcceEEEeccc
Q 008085 275 LKAKPSYPNATFLMSARPY 293 (578)
Q Consensus 275 v~~~~~~~~g~y~l~~~~~ 293 (578)
+++...+ |.|.+|||-.
T Consensus 560 ~rfadnp--G~w~~HCHil 576 (612)
T 3gyr_A 560 GKFDGAY--GRFMYHCHLL 576 (612)
T ss_dssp EECCSCC--EEEEEEESSH
T ss_pred EEeCCCC--cceEEcCCCh
Confidence 9965444 9999999963
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.03 E-value=5.3e-10 Score=93.80 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=61.7
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCC----CccccccCCCCeEEEEEEECCCCcceEEecCcc
Q 008085 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHIS 134 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~ 134 (578)
.+.|++++||+|+ ++|....++++|+|+...+. .+|.. ..+...+.||++++|.|+++.++|+||||||.
T Consensus 19 P~~i~v~~Gd~V~--~~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~- 92 (106)
T 2gim_A 19 PAKLTIKPGDTVE--FLNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP- 92 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTT-
T ss_pred CCEEEECCCCEEE--EEECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCC-
Confidence 3899999999865 45887778999988765432 12210 01124589999999999854789999999993
Q ss_pred ccccceeeeEEEeC
Q 008085 135 WLRATVYGPLVIFP 148 (578)
Q Consensus 135 ~~~~Gl~G~liV~~ 148 (578)
...+||.|.|+|.+
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 23469999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.92 E-value=4.4e-09 Score=92.75 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=66.0
Q ss_pred CCCCceEEEecCCEEEEEEEecCCC-CeeEEeeccccc--------C--CcC-CCCCC----C--ccccccCCCCeEEEE
Q 008085 56 QFPGPRIVAREGDRLIIKVVNHVPN-NISIHWHGIRQL--------L--SGW-ADGPA----Y--ITQCPIQTGQSYVYN 117 (578)
Q Consensus 56 ~~pgP~i~~~~Gd~v~v~l~N~l~~-~~siH~HG~~~~--------~--~~~-~DG~~----~--~tq~~i~PG~~~~Y~ 117 (578)
.|--+.|++++||+|+++|+|.... +++++.|+.... . ..+ .|-+| . .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4444799999999999999999877 899999874310 0 000 01111 0 011348999999999
Q ss_pred EEECCCCcceEEecCccccccceeeeEEEe
Q 008085 118 FTISGQRGTLFWHAHISWLRATVYGPLVIF 147 (578)
Q Consensus 118 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 147 (578)
|++ .++|+|+||||..+...||.|.|+|.
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 78999999999765444999999984
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.82 E-value=2.4e-08 Score=88.15 Aligned_cols=91 Identities=15% Similarity=0.139 Sum_probs=64.8
Q ss_pred CCCceEEEecCCEEEEEEEe--cCCCCeeEEeeccc------------cc-CCcC---CCCCCC-ccccccCCCCeEEEE
Q 008085 57 FPGPRIVAREGDRLIIKVVN--HVPNNISIHWHGIR------------QL-LSGW---ADGPAY-ITQCPIQTGQSYVYN 117 (578)
Q Consensus 57 ~pgP~i~~~~Gd~v~v~l~N--~l~~~~siH~HG~~------------~~-~~~~---~DG~~~-~tq~~i~PG~~~~Y~ 117 (578)
|-.+.|++++||+|+++++| .....++++.+... .. ...+ .|.... ..-..|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 43479999999999999999 66788888887421 00 0000 011000 001357999999999
Q ss_pred EEECCCCcceEEecCccccc-cceeeeEEEeC
Q 008085 118 FTISGQRGTLFWHAHISWLR-ATVYGPLVIFP 148 (578)
Q Consensus 118 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 148 (578)
|++ +.+|+|||||+..+.. .||.|.|+|.|
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 997 7899999999986544 79999999974
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.80 E-value=1.2e-08 Score=85.48 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=62.9
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEe-
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRA- 532 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~a- 532 (578)
..+.++.|++|+|+ |.+ ...|+||+|+..+.. . .|. +. ....+|++.+.||+...+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~-----~~------~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD-----LA------KSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH-----HH------HHHCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc-----cc------hhccccceeeCCCCEEEEEEecC
Confidence 35688999999986 543 368999999864311 0 000 00 0011477889999999998888
Q ss_pred cCceeEEEEeechhhhhccceEEEEEe
Q 008085 533 DNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 533 dnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
+.||.|.|||| .|.+.||+..+.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999985
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.80 E-value=1.5e-08 Score=83.77 Aligned_cols=79 Identities=9% Similarity=0.051 Sum_probs=63.1
Q ss_pred cCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc
Q 008085 54 NGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (578)
Q Consensus 54 NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (578)
|..|-...|++++||+|+++++|....++++...+.... ..+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 444544699999999999999999877777766654322 347899999999996 899999999975
Q ss_pred cccccceeeeEEEe
Q 008085 134 SWLRATVYGPLVIF 147 (578)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (578)
|. ..||.|.|||+
T Consensus 88 H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 88 HL-LKGMEGKVIVK 100 (100)
T ss_dssp TG-GGTCEEEEEEC
T ss_pred cc-CCCCEEEEEEC
Confidence 42 26899999995
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.74 E-value=2.7e-08 Score=87.83 Aligned_cols=99 Identities=20% Similarity=0.206 Sum_probs=71.1
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCC--ceEEEE-ec--CC---CCCCCCCCCCCCCCCCCcceeeeecCCcE
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGF--NFFVIG-QG--FG---NYDPSKDRKNFNLIDPVERNTVGVPSGGW 525 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~--~F~Vl~-~g--~g---~~~~~~~~~~~~~~~p~~rDTv~v~~~~~ 525 (578)
..+.++.|++|+|++.|.+. +.+.|.||++.. .+.-+. .+ .+ .|-+.. -....+++|..|.+|..
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~ 105 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGES 105 (140)
T ss_dssp SEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEE
T ss_pred CeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCce
Confidence 35788999999999999321 247899999853 111000 00 00 010000 01134789999999999
Q ss_pred EEEEEEecCceeEEEEeechhhhhccceEEEEEe
Q 008085 526 VAIRFRADNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 526 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
..+.|+++.||.|.|||++..|...||...+.|.
T Consensus 106 ~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 106 GSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999999986
No 84
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.68 E-value=3.9e-08 Score=80.99 Aligned_cols=80 Identities=13% Similarity=0.147 Sum_probs=58.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCC-CCCccccccCCCCeEEEEEEECCCCcceEEecCcccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADG-PAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRA 138 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG-~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 138 (578)
+.|++++||+|+ ++|....++++|+|+...+.. .|. ....+...+.||+++++.|. ++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 789999999865 589887899999998643211 110 00011235799999998774 799999999943 336
Q ss_pred ceeeeEEEe
Q 008085 139 TVYGPLVIF 147 (578)
Q Consensus 139 Gl~G~liV~ 147 (578)
||.|.|+|.
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 85
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.65 E-value=6.5e-08 Score=84.19 Aligned_cols=77 Identities=13% Similarity=0.199 Sum_probs=56.5
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccc
Q 008085 56 QFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW 135 (578)
Q Consensus 56 ~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 135 (578)
.|-.+.|++++||+|+ ++|....++++++.... +|........+.||++++|.| +++|+|+|||-.|.
T Consensus 56 ~F~P~~i~V~~GdtV~--~~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~ 123 (132)
T 3c75_A 56 KYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 123 (132)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEE--EEECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc
Confidence 4444899999999975 45887777777775422 122122223588999999888 47999999998765
Q ss_pred cccceeeeEEEe
Q 008085 136 LRATVYGPLVIF 147 (578)
Q Consensus 136 ~~~Gl~G~liV~ 147 (578)
||.|.|+|+
T Consensus 124 ---gM~G~I~V~ 132 (132)
T 3c75_A 124 ---FMRGKVIVE 132 (132)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 86
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.63 E-value=7.4e-08 Score=79.27 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=57.0
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCcccccc
Q 008085 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRA 138 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 138 (578)
.+.|++++||+|+ ++|....++++|.++...++.. .++.. .....+.||+++++.| .++|+|+|||+.| ..+
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTT
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-ccc
Confidence 3789999999865 5587777899998875432100 00100 1124589999999877 4799999999943 337
Q ss_pred ceeeeEEEe
Q 008085 139 TVYGPLVIF 147 (578)
Q Consensus 139 Gl~G~liV~ 147 (578)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.60 E-value=9.7e-08 Score=77.32 Aligned_cols=74 Identities=18% Similarity=0.232 Sum_probs=55.3
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCcccccc
Q 008085 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRA 138 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 138 (578)
.+.|++++||+|+ +.|....+++++.++.. ++. .....+.||+++++.| +++|+|||||+.|. .+
T Consensus 18 P~~i~v~~Gd~V~--~~n~~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPHR-GA 82 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-GG
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-cC
Confidence 4799999999975 55877778899888731 000 1124589999988877 57999999999442 35
Q ss_pred ceeeeEEEe
Q 008085 139 TVYGPLVIF 147 (578)
Q Consensus 139 Gl~G~liV~ 147 (578)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.57 E-value=1.8e-07 Score=76.74 Aligned_cols=79 Identities=18% Similarity=0.200 Sum_probs=55.8
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
+.|++++||+| ++.|....+++++.++...+.. .++.. .....+.||+++++.| .++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~~~--~~~~~-~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~~g 89 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAGES--APALS-NTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RGAG 89 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTTSC--HHHHC-BCCCCCSCSCCEEEEC---CSCSEEEEECSST-TTTT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCccc--ccccc-ccceecCCCCEEEEEe---CCCeEEEEEccCh-hhcC
Confidence 78999999985 5668776788888887543110 00000 0113579999998877 5799999999943 2369
Q ss_pred eeeeEEEe
Q 008085 140 VYGPLVIF 147 (578)
Q Consensus 140 l~G~liV~ 147 (578)
|.|.|+|+
T Consensus 90 M~G~i~V~ 97 (97)
T 1b3i_A 90 MVGTITVE 97 (97)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 89
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.54 E-value=2.4e-07 Score=76.11 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=59.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc-ceeeeecCCcEEEEEEEec
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVE-RNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~v~~~~~~~irf~ad 533 (578)
.+.++.|++|+|+ |.+ ...|.+|+|+..+- +. ..+.| +|+..+.+|+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 5789999999997 432 36899999874321 00 00112 5788899999887766 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.||.|.|||| .|.+.||...+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999884
No 90
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.51 E-value=2.1e-07 Score=77.11 Aligned_cols=83 Identities=12% Similarity=0.021 Sum_probs=54.8
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeecccccCCc--CCCCCCCc--cccccCCCCeEEEEEEECCCCcceEEecCcc
Q 008085 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSG--WADGPAYI--TQCPIQTGQSYVYNFTISGQRGTLFWHAHIS 134 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~--~~DG~~~~--tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~ 134 (578)
.+.|++++||+|+ ++|....+++++++.-...... .++..+++ ....+.||+++++.| .++|+|+|||+.|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H 90 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCTPH 90 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECSTT
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeCCC
Confidence 3799999999976 5688767888887731100000 00000111 123589999988877 5799999999933
Q ss_pred ccccceeeeEEEe
Q 008085 135 WLRATVYGPLVIF 147 (578)
Q Consensus 135 ~~~~Gl~G~liV~ 147 (578)
..+||.|.|+|+
T Consensus 91 -~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 -KSANMKGTLTVK 102 (102)
T ss_dssp -GGGTCEEEEEEC
T ss_pred -cccCCeEEEEEC
Confidence 346999999984
No 91
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.50 E-value=2.1e-07 Score=80.01 Aligned_cols=76 Identities=11% Similarity=0.145 Sum_probs=52.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
+.|++++||+|++.+.|. ++++..+.... -+|.. ...+.||++++|.| +.+|+|||||..| ...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~~-----P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGGA-----PEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTCS-----CTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCcC-----CCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999976665553 44444332111 12211 13457999988888 4799999999865 3479
Q ss_pred eeeeEEEeCCC
Q 008085 140 VYGPLVIFPKR 150 (578)
Q Consensus 140 l~G~liV~~~~ 150 (578)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 92
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.49 E-value=3.5e-07 Score=75.16 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=59.3
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|++|+| .|.+ ...|.+|+|+..+ ..+ ++. ...++|+..+.+|+...++| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~-----p~~-~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAI-----PSG-VNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGS-----CTT-CCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC-----CCc-ccc----------ccccccceecCCCCEEEEEe--CC
Confidence 578899999998 4543 3689999997522 000 000 01247889999999887765 68
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||.|.|||| .|.+.||...+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999884
No 93
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.48 E-value=3.9e-07 Score=73.69 Aligned_cols=72 Identities=17% Similarity=0.326 Sum_probs=56.9
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|+.|+|+ |.+ ...|.+|+|+.. +...++..+.+|+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 5688999999987 432 368999988720 0125678899998877765 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||.|.|||| .|...||...+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999874
No 94
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.46 E-value=4.8e-07 Score=77.29 Aligned_cols=75 Identities=11% Similarity=0.068 Sum_probs=52.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
..|++++||+|++.+.| .++++..+.. .+-+|. ....+.||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H~-~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPHF-GMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 79999999997777766 2444443321 112332 113457999888888 47999999999543 379
Q ss_pred eeeeEEEeCC
Q 008085 140 VYGPLVIFPK 149 (578)
Q Consensus 140 l~G~liV~~~ 149 (578)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 95
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.44 E-value=5.5e-07 Score=74.11 Aligned_cols=77 Identities=10% Similarity=0.126 Sum_probs=55.4
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCC------CccccccCCCCeEEEEEEECCCCcceEEecCc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA------YITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~------~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (578)
+.|++++||+| +++|....+++++.++...+ +|.. ......+.||+++++.|+ ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKI--VFKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcCC
Confidence 79999999976 55888777888888764321 1110 001135799999888773 79999999994
Q ss_pred cccccceeeeEEEe
Q 008085 134 SWLRATVYGPLVIF 147 (578)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (578)
| ..+||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 3 336999999984
No 96
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.44 E-value=6.8e-07 Score=73.55 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=56.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCC------CccccccCCCCeEEEEEEECCCCcceEEecCc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA------YITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~------~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 133 (578)
+.|++++||+| +++|....++++|.++...+ +|.. ......+.||+++++.|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 56898877888888875321 2211 011135789999888774 79999999993
Q ss_pred cccccceeeeEEEe
Q 008085 134 SWLRATVYGPLVIF 147 (578)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (578)
| ..+||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 3 336999999984
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.41 E-value=1.4e-07 Score=77.50 Aligned_cols=78 Identities=15% Similarity=0.304 Sum_probs=58.5
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+ . ....+++..+.+|+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------A------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------H------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------c------ccccccceecCCCCEEEEEe--CC
Confidence 5788999999987 432 3689999987544 000 0 00115677889998877766 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||.|.|||+ .|.+.||...+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999884
No 98
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.40 E-value=5.7e-07 Score=76.72 Aligned_cols=75 Identities=9% Similarity=-0.011 Sum_probs=52.9
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
..|++++||+|+ ++|.. .++++..+.... -+|. ....+.||++++|.| +.+|+|||||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 799999999965 55554 566666653211 1222 123467999988888 4789999999744 2369
Q ss_pred eeeeEEEeCC
Q 008085 140 VYGPLVIFPK 149 (578)
Q Consensus 140 l~G~liV~~~ 149 (578)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.37 E-value=1.3e-06 Score=73.59 Aligned_cols=75 Identities=20% Similarity=0.315 Sum_probs=58.0
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|+.|+|.+.|.+. ..|-|++... .-+..+.||+...+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSP---ISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS---SCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECCC---CeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 35788999999999999642 3444443321 1156789999999999999
Q ss_pred CceeEEEEeechhhhhccceEEEEEec
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
.||.|.||||+..|... |...+.|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887554 999998863
No 100
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.34 E-value=1.7e-06 Score=71.36 Aligned_cols=72 Identities=24% Similarity=0.437 Sum_probs=58.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|+.|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|+++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 578999999999999964 2557666544322 234778899999999999
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||.|.|+|. .|...||...+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999997 59999999999885
No 101
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.34 E-value=1.3e-06 Score=75.22 Aligned_cols=93 Identities=9% Similarity=0.010 Sum_probs=60.7
Q ss_pred CCCCceEEEecC-CEEEEEEEecCCCC-----eeE--Eeeccccc----------CCcC---CCCCCCccccccCCCCeE
Q 008085 56 QFPGPRIVAREG-DRLIIKVVNHVPNN-----ISI--HWHGIRQL----------LSGW---ADGPAYITQCPIQTGQSY 114 (578)
Q Consensus 56 ~~pgP~i~~~~G-d~v~v~l~N~l~~~-----~si--H~HG~~~~----------~~~~---~DG~~~~tq~~i~PG~~~ 114 (578)
+|=-..|.|++| |+|+|+|+|....+ +++ --+|.... ...+ .|.--......|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343358999999 99999999986543 433 22331100 0000 111000011347999999
Q ss_pred EEEEEEC--CCCcceEEecCccccccceeeeEEEeC
Q 008085 115 VYNFTIS--GQRGTLFWHAHISWLRATVYGPLVIFP 148 (578)
Q Consensus 115 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 148 (578)
++.|+++ .++|+|||.|-..+...||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9999973 389999999987666669999999963
No 102
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.33 E-value=2.7e-06 Score=70.84 Aligned_cols=77 Identities=13% Similarity=0.205 Sum_probs=54.0
Q ss_pred CCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccc
Q 008085 56 QFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW 135 (578)
Q Consensus 56 ~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 135 (578)
.|-...|++++||+|+ +.|....++++....... |........+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~--~~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEE--EEECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 3434799999999975 458876666666554321 11011112478999988887 47899999998865
Q ss_pred cccceeeeEEEe
Q 008085 136 LRATVYGPLVIF 147 (578)
Q Consensus 136 ~~~Gl~G~liV~ 147 (578)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 103
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.32 E-value=1.7e-06 Score=71.13 Aligned_cols=82 Identities=11% Similarity=0.135 Sum_probs=58.6
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|++|+| .|.+ ...|.+|+++..|- .+ ++.. .. ...+|++.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p-----~g-~~~~--~~------~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP-----AG-VDVT--KI------SMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC-----TT-CCHH--HH------SCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc-----cc-cccc--cc------cccccceeeCCCCEEEEEe--CC
Confidence 568899999988 4543 36899999985430 00 0000 00 0125677889999877766 69
Q ss_pred ceeEEEEeechhhhhccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||.|.|||+ .|.+.||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999874
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.25 E-value=1.8e-06 Score=70.92 Aligned_cols=78 Identities=13% Similarity=0.064 Sum_probs=54.6
Q ss_pred CceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCC----ccccccCCCCeEEEEEEECCCCcceEEecCcc
Q 008085 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQSYVYNFTISGQRGTLFWHAHIS 134 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~ 134 (578)
.+.|++++||+|+ +.|....++++....-.. -+|.-. .+...+.||+++++.| .++|+|+|+|..|
T Consensus 17 P~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H 86 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEE--EEECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh
Confidence 3799999999855 568876777777664221 122210 0112579999988877 5799999999874
Q ss_pred ccccceeeeEEEe
Q 008085 135 WLRATVYGPLVIF 147 (578)
Q Consensus 135 ~~~~Gl~G~liV~ 147 (578)
. .+||.|.|+|+
T Consensus 87 ~-~~gM~G~I~V~ 98 (98)
T 1iuz_A 87 A-GAGMKMTITVQ 98 (98)
T ss_dssp G-GGTCEEEEEEC
T ss_pred c-cCCCEEEEEEC
Confidence 3 25999999984
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.24 E-value=4.7e-06 Score=74.73 Aligned_cols=93 Identities=11% Similarity=0.039 Sum_probs=60.7
Q ss_pred CCCCceEEE-ecCCEEEEEEEecCCCC-----eeEEe--ecccc------cCCcCCCCCC----C-c-cccccCCCCeEE
Q 008085 56 QFPGPRIVA-REGDRLIIKVVNHVPNN-----ISIHW--HGIRQ------LLSGWADGPA----Y-I-TQCPIQTGQSYV 115 (578)
Q Consensus 56 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~------~~~~~~DG~~----~-~-tq~~i~PG~~~~ 115 (578)
+|=-..|.| ++||+|+|+|+|....+ +++-+ +|... .....++=++ . + ....|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454358999 99999999999987653 33322 22100 0000001011 0 0 112479999999
Q ss_pred EEEEEC-CCCcceEEecCccccccceeeeEEEeC
Q 008085 116 YNFTIS-GQRGTLFWHAHISWLRATVYGPLVIFP 148 (578)
Q Consensus 116 Y~~~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 148 (578)
+.|+++ -++|+|||+|-..+...||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999973 179999999987666669999999963
No 106
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.23 E-value=2.1e-06 Score=70.95 Aligned_cols=85 Identities=14% Similarity=0.099 Sum_probs=57.9
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc-ceeeeecCCcEEEEEEEe
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVE-RNTVGVPSGGWVAIRFRA 532 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~v~~~~~~~irf~a 532 (578)
..+.++.|++|+|+ |.+ ...|.++++.-... .+.+... . ..+.+ .+++.+.+|+...+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--
Confidence 35789999999986 543 36899998731100 0000000 0 00122 4677889998877766
Q ss_pred cCceeEEEEeechhhhhccceEEEEEe
Q 008085 533 DNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 533 dnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
+.||.|.|||+ .|.+.||...+.|+
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999884
No 107
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.22 E-value=3.9e-06 Score=71.74 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=49.4
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
+.|++++||+|+ +.|... ++++..+- ...-||... ....||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~--f~~~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVT--FIPVDK-GHNVESIK-----DMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEE--EEESSS-SCCCEECT-----TCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEE--EEECCC-CeEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 799999999965 455533 44444331 111122211 2346999887777 47999999997532 369
Q ss_pred eeeeEEEeCC
Q 008085 140 VYGPLVIFPK 149 (578)
Q Consensus 140 l~G~liV~~~ 149 (578)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 108
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.16 E-value=4.2e-06 Score=71.54 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=50.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
+.|++++||+|+ ++|... ++++..+. ..+-||.. ...+.||++++|.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 799999999955 556533 44444331 11122221 12357999888777 46999999998532 269
Q ss_pred eeeeEEEeCC
Q 008085 140 VYGPLVIFPK 149 (578)
Q Consensus 140 l~G~liV~~~ 149 (578)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 109
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.14 E-value=9e-06 Score=85.57 Aligned_cols=91 Identities=15% Similarity=0.238 Sum_probs=64.4
Q ss_pred eEEEEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcce
Q 008085 48 KSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTL 127 (578)
Q Consensus 48 ~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~ 127 (578)
..+...+-.|-.+.|+|++||+|++.|+|.....-.+ ||..++.. |+ ..-+.||++.++.|++ +++|+|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPsl----GI----K~DaiPGrtnsvtFta-dkPGvY 614 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVNH----GV----SMEISPQQTSSITFVA-DKPGLH 614 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETTT----TE----EEEECTTCEEEEEEEC-CSCEEE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecCC----Cc----eeeeCCCCeEEEEEEc-CCCEEE
Confidence 3344556667668999999999999999974211112 33333211 11 1357899999999997 899999
Q ss_pred EEecCcc-c-cccceeeeEEEeCC
Q 008085 128 FWHAHIS-W-LRATVYGPLVIFPK 149 (578)
Q Consensus 128 wYH~H~~-~-~~~Gl~G~liV~~~ 149 (578)
||||+.. + ...+|.|.|+|+++
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 9999852 2 23789999999874
No 110
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.08 E-value=2e-05 Score=67.60 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=60.6
Q ss_pred CCCCceEEE-ecCCEEEEEEEecCCCC-----eeEEeecc-----------cccC-Cc---CCCCCCCccccccCCCCeE
Q 008085 56 QFPGPRIVA-REGDRLIIKVVNHVPNN-----ISIHWHGI-----------RQLL-SG---WADGPAYITQCPIQTGQSY 114 (578)
Q Consensus 56 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~siH~HG~-----------~~~~-~~---~~DG~~~~tq~~i~PG~~~ 114 (578)
+|--..|.| +.|++|+|+|+|....+ +++-+-.. ..-. .. ..|.--......|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 444368999 99999999999987654 55433211 0000 00 0111000011247999999
Q ss_pred EEEEEECC--CCcc-eEEecCccccccceeeeEEEeC
Q 008085 115 VYNFTISG--QRGT-LFWHAHISWLRATVYGPLVIFP 148 (578)
Q Consensus 115 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 148 (578)
++.|++ . ++|+ |+|.|...+..+||.|.|+|.+
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 999997 4 6885 9999987776679999999963
No 111
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.06 E-value=7e-06 Score=70.66 Aligned_cols=93 Identities=17% Similarity=0.122 Sum_probs=59.4
Q ss_pred CCCCceEEE-ecCCEEEEEEEecCCCC-----eeEEe--ecccc-------cCCcCCC----CCCC-c-cccccCCCCeE
Q 008085 56 QFPGPRIVA-REGDRLIIKVVNHVPNN-----ISIHW--HGIRQ-------LLSGWAD----GPAY-I-TQCPIQTGQSY 114 (578)
Q Consensus 56 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~-------~~~~~~D----G~~~-~-tq~~i~PG~~~ 114 (578)
+|=-..|.| ++||+|+|+|+|....+ +++-+ +|... .....+| +-+. + ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343358999 99999999999987553 44332 22100 0000011 0010 1 11247999999
Q ss_pred EEEEEEC-CCCcc-eEEecCccccccceeeeEEEeC
Q 008085 115 VYNFTIS-GQRGT-LFWHAHISWLRATVYGPLVIFP 148 (578)
Q Consensus 115 ~Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 148 (578)
++.|+++ -.+|+ |||.|...+...||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 9999973 05655 9999987766669999999963
No 112
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.05 E-value=7.3e-06 Score=67.27 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=57.7
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|++|+| .|.+ ...|.++++...+- .+ .+. .. ....++.+.+.+|+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p-----~~-~~~------~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP-----SG-VDA------SK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC-----TT-CCH------HH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc-----cc-ccc------cc--cccccCccccCCCCEEEEEE--C
Confidence 3578999999988 4543 36899998875320 00 000 00 00124557788998877755 6
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.||.|.|||+ .|...||...+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999873
No 113
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.03 E-value=1.3e-05 Score=68.45 Aligned_cols=73 Identities=11% Similarity=0.075 Sum_probs=50.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCccccccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 139 (578)
+.|++++||+|+ +.|... .++++...- .+-+|.. ...+.||++++|.| +++|+|||+|..|..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 799999999865 556543 444444431 1112211 13457999988888 478999999988654
Q ss_pred eeeeEEEeCC
Q 008085 140 VYGPLVIFPK 149 (578)
Q Consensus 140 l~G~liV~~~ 149 (578)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.03 E-value=2.4e-05 Score=67.12 Aligned_cols=91 Identities=10% Similarity=0.035 Sum_probs=59.5
Q ss_pred CCCCceEEE-ecCCEEEEEEEecCCCC-----eeEEe--ecccc-------cCCcCCCCCC-----Cc-cccccCCCCeE
Q 008085 56 QFPGPRIVA-REGDRLIIKVVNHVPNN-----ISIHW--HGIRQ-------LLSGWADGPA-----YI-TQCPIQTGQSY 114 (578)
Q Consensus 56 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~siH~--HG~~~-------~~~~~~DG~~-----~~-tq~~i~PG~~~ 114 (578)
+|=-..|.| ++||+|+|+|+|....+ +++-+ .|... .....++=++ .+ ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 443368999 99999999999987553 55443 22110 0000011011 01 01248999999
Q ss_pred EEEEEECC--CCcc-eEEecCccccccceeeeEEEe
Q 008085 115 VYNFTISG--QRGT-LFWHAHISWLRATVYGPLVIF 147 (578)
Q Consensus 115 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 147 (578)
++.|++ . .+|+ |||.|-..+...||.|.|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 5776 999998766666999999984
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.95 E-value=2.7e-05 Score=83.68 Aligned_cols=79 Identities=14% Similarity=0.339 Sum_probs=63.4
Q ss_pred ceEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEe
Q 008085 453 TKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRA 532 (578)
Q Consensus 453 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~a 532 (578)
.+.+.++.|+.|+|.+.|.....+..|.|+++++.+. ..+.||....+.|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 3467899999999999995432235799988876432 358899999999999
Q ss_pred cCceeEEEEeec---hhhhhccceEEEEEecC
Q 008085 533 DNPGVWFMHCHF---EVHISWGLKMAWIVLNG 561 (578)
Q Consensus 533 dnpG~w~~HCHi---l~H~d~GMm~~~~V~~~ 561 (578)
+.||.|.||||. ..|. ||...+.|++.
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 999999999993 5675 99999999753
No 116
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.94 E-value=2.2e-05 Score=69.90 Aligned_cols=89 Identities=17% Similarity=0.321 Sum_probs=60.7
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc---ceeeeecCCc--EEEE
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVE---RNTVGVPSGG--WVAI 528 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~---rDTv~v~~~~--~~~i 528 (578)
+.+.++.|+.|++++.|.+. ...|-|-++.. + ..+... ....+.. .-+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~-------~-~~~~~~------~~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNK--GFGHSFDITKK-------G-PPYAVM------PVIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECCT--TCCCCCEEESC-------C-SCCCSS------CCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCC--CeeeEEEEeec-------C-cchhcc------ccccccccccccccccCCCCceEEEE
Confidence 46899999999999999531 34566655522 1 011000 0000000 0112678999 8999
Q ss_pred EEEecCceeEEEEeechhhhhccceEEEEEe
Q 008085 529 RFRADNPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 529 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.|++ .||.|.||||+.-|...||-..+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999873
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.72 E-value=0.00012 Score=60.59 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=50.8
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|+.|+|+ |.+ ...|.+|+|... .|. ..+ ++-.+.+|+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--C
Confidence 36788999999996 543 368999988521 010 001 222477888766555 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.||.|.|||++ |. ||...+.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999998874
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.34 E-value=0.0013 Score=55.50 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=55.0
Q ss_pred CCCCceEEEec-CCEEEEEEEecCCCC-----eeEEee-----------ccccc-CCcC---CCCCCCccccccCCCCeE
Q 008085 56 QFPGPRIVARE-GDRLIIKVVNHVPNN-----ISIHWH-----------GIRQL-LSGW---ADGPAYITQCPIQTGQSY 114 (578)
Q Consensus 56 ~~pgP~i~~~~-Gd~v~v~l~N~l~~~-----~siH~H-----------G~~~~-~~~~---~DG~~~~tq~~i~PG~~~ 114 (578)
+|--..|.|++ |++|+|+|+|....+ +++=+= |+..- ...+ .|.---....-|.||++.
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34447999986 999999999998543 332221 11110 0011 111000011247999999
Q ss_pred EEEEEEC--CCCcceEEecCccccccceeeeEEEe
Q 008085 115 VYNFTIS--GQRGTLFWHAHISWLRATVYGPLVIF 147 (578)
Q Consensus 115 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 147 (578)
+..|+.+ .++|+|.|.|..| . ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~gH--~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCAAH--A-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECSSS--T-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcCCC--C-CcEEEEEEC
Confidence 9999984 2799999999933 3 999999984
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.26 E-value=0.00069 Score=57.91 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=51.2
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|++|+|++.| ..|-+..+... + +. -...+.+.||+... ++++
T Consensus 23 ~~i~V~~GDtVtf~n~~------~~H~v~~~~~~----------~-P~------------g~~~f~s~pGet~s--~TF~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD------KGHNSALMKGG----------A-PE------------GAETWKGKINEEIT--VTLS 71 (127)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTTC----------S-CT------------TCCCCBCCTTCCCE--EECC
T ss_pred CEEEECCCCEEEEEECC------CCceEEEccCc----------C-CC------------CccceecCCCCEEE--EEeC
Confidence 35789999999998765 24555544210 0 00 00112235676544 4458
Q ss_pred CceeEEEEeechhhhhccceEEEEEecCC
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
.||.|.|||- .|...||...+.|.++.
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999998754
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.20 E-value=0.0014 Score=55.60 Aligned_cols=73 Identities=16% Similarity=0.196 Sum_probs=51.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|++|+|++.| ..|-+..+.. .+ +. . -+.+.+.||+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~-P~----g--------~~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------IL-PE----G--------VESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SS-CT----T--------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cC-CC----C--------ccceecCCCCEEEEEe--CC
Confidence 5789999999999876 2466655421 00 00 0 0112245777655555 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEec
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVLN 560 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~~ 560 (578)
||.|.|+|- .|...||...+.|.+
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECC
Confidence 999999999 899999999999986
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.19 E-value=0.0011 Score=56.26 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=52.1
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|++|+|+..+ ..|-+..+.. .+.. -.+.+.+.+|....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~-------------g~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPE-------------GVAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCT-------------TSCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCC-------------CccccccCCCCEEEEEe--CC
Confidence 5789999999998543 4677766521 1110 01123345777655554 89
Q ss_pred ceeEEEEeechhhhhccceEEEEEecCC
Q 008085 535 PGVWFMHCHFEVHISWGLKMAWIVLNGN 562 (578)
Q Consensus 535 pG~w~~HCHil~H~d~GMm~~~~V~~~~ 562 (578)
||.|.|||- .|...||...+.|.++.
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 999999995 89999999999998753
No 122
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.91 E-value=0.0043 Score=53.55 Aligned_cols=74 Identities=14% Similarity=0.216 Sum_probs=54.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc--cccc
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI--SWLR 137 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~--~~~~ 137 (578)
..|.+..|++|++.++|.. . .|+..++.. |. ..-+.||+.-++.|+. +++|+|+|+|.. +...
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V-----~Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-S-----CEEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-c-----cceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 3 344443321 21 1346899999999996 899999999954 2223
Q ss_pred cceeeeEEEeC
Q 008085 138 ATVYGPLVIFP 148 (578)
Q Consensus 138 ~Gl~G~liV~~ 148 (578)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 69999998863
No 123
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.89 E-value=0.0038 Score=50.67 Aligned_cols=81 Identities=19% Similarity=0.290 Sum_probs=53.7
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|++|+|+ |.+ ...|-+.++... +. ...+. .....+...+.+|....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~p-----~g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------VP-----AGVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTTS----------SC-----TTCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------Cc-----ccccc-ccccccccccCCCCEEEEEc--C
Confidence 35788999999996 432 256766655311 00 00000 00113446788998777765 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.||.|.|+|-+ |...||...+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999874
No 124
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.80 E-value=0.0052 Score=50.68 Aligned_cols=73 Identities=18% Similarity=0.125 Sum_probs=49.7
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|+.|+|+ |.+ ...|-+++....- + . ...++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~----~-----------~~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------G----E-----------DAFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------S----S-----------SCEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------C----c-----------ccccccccCCCCEEEEEe--C
Confidence 35788999999997 533 2567766553210 0 0 012333567888776666 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.||.|.|+|-+ |. ||...+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999999874
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.63 E-value=0.0076 Score=51.11 Aligned_cols=75 Identities=13% Similarity=0.213 Sum_probs=49.1
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|++|+|+..+ ..|-+.++- +.. +.. . ..+.+.+|.... ++++
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~----------~~~-p~~-~-----------~~~~~~pG~t~~--~tF~ 69 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVD------KGHNVESIK----------DMI-PEG-A-----------EKFKSKINENYV--LTVT 69 (123)
T ss_dssp SEEEECTTCEEEEEESS------SSCCCEECT----------TCS-CTT-C-----------CCCBCCTTCCEE--EECC
T ss_pred CEEEECCCCEEEEEECC------CCeEEEEec----------ccC-CCC-c-----------cceecCCCCEEE--EEeC
Confidence 35788999999997654 246555431 000 000 0 012234676544 4558
Q ss_pred CceeEEEEeechhhhhccceEEEEEecC
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
.||.|.|+|- .|...||...+.|.++
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 70 QPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 9999999997 5999999999999763
No 126
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.63 E-value=0.0078 Score=51.79 Aligned_cols=73 Identities=18% Similarity=0.125 Sum_probs=50.5
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|+.|+|+ |.+ ...|-+++.... .| . ...++-.+.+|+...+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g----~-----------~~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VG----E-----------DAFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SS----S-----------SCEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CC----c-----------ccccccccCCCCEEEEEc--C
Confidence 46789999999997 543 356877764321 00 0 012334577888777666 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEe
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
.||.|.|||-+ |. ||...+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999987 76 999999874
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.61 E-value=0.01 Score=53.05 Aligned_cols=74 Identities=15% Similarity=0.243 Sum_probs=55.5
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc-ccc-c
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWL-R 137 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~-~ 137 (578)
..|.+..|++|++.++|. +.. |+..++.. |+ +.-+.||...++.|.+ +++|+|++.|.. .+. .
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSC-----EEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 689999999999999996 333 44433321 11 1235799999999996 899999999984 443 4
Q ss_pred cceeeeEEEeC
Q 008085 138 ATVYGPLVIFP 148 (578)
Q Consensus 138 ~Gl~G~liV~~ 148 (578)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 89999999963
No 128
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.59 E-value=0.009 Score=63.13 Aligned_cols=79 Identities=15% Similarity=0.243 Sum_probs=61.8
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|+.|+|++.|.....+..|.|.+.+.... +.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 457899999999999995322246777777654321 2477899999999999
Q ss_pred CceeEEEEeechhhh-hccceEEEEEec
Q 008085 534 NPGVWFMHCHFEVHI-SWGLKMAWIVLN 560 (578)
Q Consensus 534 npG~w~~HCHil~H~-d~GMm~~~~V~~ 560 (578)
.||.|.+||...-|. +.+|...+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986664 468999998874
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.52 E-value=0.0078 Score=51.07 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=49.0
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|++|+|+..+ ..|-+.++- +.. +. . ...+.+.+|.... ++++
T Consensus 21 ~~i~V~~GdtV~f~n~~------~~H~v~~~~----------~~~-p~--~----------~~~~~~~pG~t~~--~tF~ 69 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTD------KGHNVETIK----------GMA-PD--G----------ADYVKTTVGQEAV--VKFD 69 (123)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECT----------TSS-CT--T----------CCCCBCCTTSCEE--EECC
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEec----------ccC-CC--C----------ccceecCCCCEEE--EEeC
Confidence 35788999999997543 245555431 100 00 0 0112345777644 4458
Q ss_pred CceeEEEEeechhhhhccceEEEEEecC
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
.||.|.|+|- .|...||...+.|.++
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 70 KEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp SCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred CCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 9999999998 5999999999999763
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.16 E-value=0.01 Score=53.03 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=61.4
Q ss_pred EEEe-cCCCEEEEEEecCCCC--CCCCCCeeecCCceEEEEecCCCCCCC------CCCCCC-CCCC-CCcceeeeecCC
Q 008085 455 VVVL-PFNASVELVMQDTSTL--GAESHPLHLHGFNFFVIGQGFGNYDPS------KDRKNF-NLID-PVERNTVGVPSG 523 (578)
Q Consensus 455 ~~~~-~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~g~g~~~~~------~~~~~~-~~~~-p~~rDTv~v~~~ 523 (578)
.+.+ +.|+.|.|+|.|.+.. .++.| .|-+...+. ++.. .....+ ...+ .....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~H-------n~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGH-------NLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCB-------CCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccc-------eEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4788 8999999999997531 01124 343333220 0000 000000 0001 124557778999
Q ss_pred cEEEEEEEec--CceeEEEEeechhhhhccceEEEEEe
Q 008085 524 GWVAIRFRAD--NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 524 ~~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
+...|.|.++ .||.|-|+|-+--|.. ||-..+.|+
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999987 8999999999999998 899999885
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.00 E-value=0.032 Score=48.04 Aligned_cols=70 Identities=21% Similarity=0.323 Sum_probs=51.8
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCc
Q 008085 456 VVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNP 535 (578)
Q Consensus 456 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnp 535 (578)
+.++.|+.|+|++.|.+ ..|. |++-+.+ --+.+.||....+.|+++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~~---------------------~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGTN---------------------INVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTSS---------------------CEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCCC---------------------ceeEeCCCCcEEEEEEcCCC
Confidence 67899999999998842 3333 4442111 01346788888899999999
Q ss_pred eeEEEEeec---hhhhhccceEEEEEe
Q 008085 536 GVWFMHCHF---EVHISWGLKMAWIVL 559 (578)
Q Consensus 536 G~w~~HCHi---l~H~d~GMm~~~~V~ 559 (578)
|.|.++|.. ..| .+|-..++|+
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5899988885
No 132
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.96 E-value=0.056 Score=46.07 Aligned_cols=96 Identities=14% Similarity=0.217 Sum_probs=62.1
Q ss_pred eEEEecCC-CEEEEEEecCCCCC--CCCCCeeecCCceEEEEecCCCCCC-------CCCCCCCCC--CCCCcceeeeec
Q 008085 454 KVVVLPFN-ASVELVMQDTSTLG--AESHPLHLHGFNFFVIGQGFGNYDP-------SKDRKNFNL--IDPVERNTVGVP 521 (578)
Q Consensus 454 ~~~~~~~g-~~ve~~i~N~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~-------~~~~~~~~~--~~p~~rDTv~v~ 521 (578)
..+.++.| +.|.+++.|.+... ++.| .|-+...+. +.. ......+-. ..-....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H-------~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGH-------NWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCB-------CCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCccccccc-------ceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 45789999 99999999965310 1234 344433220 000 000000000 001234567789
Q ss_pred CCcEEEEEEEec---CceeEEEEeechhhhhccceEEEEEe
Q 008085 522 SGGWVAIRFRAD---NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 522 ~~~~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||+...+.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 9999999999999988 899999885
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.84 E-value=0.029 Score=47.43 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=47.5
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
..+.++.|++|+|+..+ ..|-++++.. .+... . ..+.+.+|....+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~~--~-----------~~~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPDG--A-----------EAFKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECTT----------CSCTT--C-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEccc----------ccCCC--c-----------ceeecCCCCEEEEEe--C
Confidence 35788999999997543 2466666531 11000 0 012235677655555 8
Q ss_pred CceeEEEEeechhhhhccceEEEEEecC
Q 008085 534 NPGVWFMHCHFEVHISWGLKMAWIVLNG 561 (578)
Q Consensus 534 npG~w~~HCHil~H~d~GMm~~~~V~~~ 561 (578)
.||.|.|+|-+ |.. |...+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999987 666 9999999763
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.02 E-value=0.18 Score=42.82 Aligned_cols=96 Identities=15% Similarity=0.150 Sum_probs=60.5
Q ss_pred eEEEe-cCCCEEEEEEecCCCC--CCCCCCeeecCCceEEEEecCCCCCCC-------CCCCCCCC-CC-CCcceeeeec
Q 008085 454 KVVVL-PFNASVELVMQDTSTL--GAESHPLHLHGFNFFVIGQGFGNYDPS-------KDRKNFNL-ID-PVERNTVGVP 521 (578)
Q Consensus 454 ~~~~~-~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~g~g~~~~~-------~~~~~~~~-~~-p~~rDTv~v~ 521 (578)
.-+.+ +.|+.|.+++.|.+.. .++.|- |-+...+. +... .....+-. .+ .....+..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHN-------LVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBC-------CEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcce-------EEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 35788 8899999999997531 012243 44433210 0000 00000000 01 1133566789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeechhhhhccceEEEEEe
Q 008085 522 SGGWVAIRFRAD--NPGV-WFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 522 ~~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 559 (578)
||+...|.|.++ .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 7866 999999999998 899999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.35 E-value=0.16 Score=43.07 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=39.3
Q ss_pred cceeeeecCCcEEEEEEEec--Ccee-EEEEeechhhhhccceEEEEEe
Q 008085 514 ERNTVGVPSGGWVAIRFRAD--NPGV-WFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 514 ~rDTv~v~~~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 559 (578)
...|..|.||+...+.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 80 ~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 80 IAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred hccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 34566789999999999988 8994 999999999999 999999885
No 136
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.13 E-value=0.32 Score=40.87 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=59.8
Q ss_pred ceEEEecC-CCEEEEEEecCCCCCCCCCCeeecCCceEEEEecC--CCCCC-C-CC-CCCC-CC-CCCCcceeeeecCCc
Q 008085 453 TKVVVLPF-NASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGF--GNYDP-S-KD-RKNF-NL-IDPVERNTVGVPSGG 524 (578)
Q Consensus 453 ~~~~~~~~-g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~--g~~~~-~-~~-~~~~-~~-~~p~~rDTv~v~~~~ 524 (578)
..-+.++. |+.|+++|.|.+.+ |--.=||.|-+...+. +.... . .. ..+| .. .....-.|..|.||+
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred cCEEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCc
Confidence 34577865 99999999997642 2111245565543210 00000 0 00 0011 00 122455788899999
Q ss_pred EEEEEEEec---CceeEEEEeechhhhhccceEEEEEe
Q 008085 525 WVAIRFRAD---NPGVWFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 525 ~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 559 (578)
...|.|.+. .+|.|-|-|- -|. ||-..+.|.
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999999987 8999999999 888 999998873
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.89 E-value=0.32 Score=41.28 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=60.2
Q ss_pred eEEEe-cCCCEEEEEEecCCCCC--CCCCCeeecCCceEEEEecCC------CCCCCCCCCCC-CCCC-CCcceeeeecC
Q 008085 454 KVVVL-PFNASVELVMQDTSTLG--AESHPLHLHGFNFFVIGQGFG------NYDPSKDRKNF-NLID-PVERNTVGVPS 522 (578)
Q Consensus 454 ~~~~~-~~g~~ve~~i~N~~~~~--~~~HP~HlHG~~F~Vl~~g~g------~~~~~~~~~~~-~~~~-p~~rDTv~v~~ 522 (578)
.-+.+ +.|+.|.+++.|.+... .+.|- |-+...+.- ..... ....+ .-.+ .....|-.|.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~~~~~~~~~~m~~~-~~~~~~~~~~~~~~~~t~~l~p 89 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHN-------LVISKEADMQPIATDGLSAG-IDKQYLKDGDARVIAHTKVIGA 89 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBC-------CEEEEGGGHHHHHHHHTTTC-GGGTTSCTTCTTEEEECCCBCT
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCce-------EEEccccchhhHHHHHhhcc-ccccccccccchhheeeeeeCC
Confidence 35788 89999999999975310 11244 433322100 00000 00000 0001 12345667999
Q ss_pred CcEEEEEEEec--Ccee-EEEEeechhhhhccceEEEEEe
Q 008085 523 GGWVAIRFRAD--NPGV-WFMHCHFEVHISWGLKMAWIVL 559 (578)
Q Consensus 523 ~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 559 (578)
|+...+.|.+. .||. |-|.|-+--|.. ||-..+.|+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 90 GEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999999987 7876 999999999999 899988873
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.86 E-value=0.28 Score=43.63 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=54.5
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecCc
Q 008085 456 VVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNP 535 (578)
Q Consensus 456 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adnp 535 (578)
+.++.|+.|+|.+.|. +..|.|.+=.... -+.+.||....+.|+++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 5789999999999985 3456554432211 1335688888899999999
Q ss_pred eeEEEEeec-hhhhhccceEEEEEe
Q 008085 536 GVWFMHCHF-EVHISWGLKMAWIVL 559 (578)
Q Consensus 536 G~w~~HCHi-l~H~d~GMm~~~~V~ 559 (578)
|.|.+.|.. --+-+.+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999985 446678999999886
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=85.27 E-value=6.2 Score=32.71 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=48.3
Q ss_pred EEEEEEEecCCCCeEEEEEc-CceEEEEEe--CCCCC--------CceEEeEEEECCCceEEEEEEeCCCCCCcceEEEe
Q 008085 222 TYLLRLINAALNDELFFSIA-NHSVTVVDV--DAIYI--------KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSA 290 (578)
Q Consensus 222 ~~rlRliNa~~~~~~~~~i~-gh~~~via~--DG~~~--------~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~ 290 (578)
...|.+.|.+. ..+.|.+. |+.+.++-. +|..+ -++......|.|||...+-...++....|.|.+++
T Consensus 21 ~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 21 KFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred EEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 34567788885 34467765 555555544 46544 13456789999999999999999633339999987
Q ss_pred cc
Q 008085 291 RP 292 (578)
Q Consensus 291 ~~ 292 (578)
..
T Consensus 100 ~l 101 (120)
T 3isy_A 100 TF 101 (120)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=81.38 E-value=14 Score=30.52 Aligned_cols=71 Identities=10% Similarity=0.178 Sum_probs=45.8
Q ss_pred EEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCC---ccccccCCCCeEEEEEEECC--CCcc
Q 008085 52 TVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY---ITQCPIQTGQSYVYNFTISG--QRGT 126 (578)
Q Consensus 52 ~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~---~tq~~i~PG~~~~Y~~~~~~--~~Gt 126 (578)
..|-+-=.=+|+...|++..+.|.+...+ ..| .|+||-.+ +....|+||++.+|+...++ .+|+
T Consensus 26 v~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 26 LKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp EEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred EEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 33433323477777777777777765322 111 45777543 33456999999999999963 5899
Q ss_pred eEEecCc
Q 008085 127 LFWHAHI 133 (578)
Q Consensus 127 ~wYH~H~ 133 (578)
|..+.-.
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9877543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=65.23 E-value=15 Score=33.45 Aligned_cols=63 Identities=11% Similarity=0.074 Sum_probs=46.2
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 213 FKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 213 ~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
-.+.++.|+.+||+|-+.. -.+.|.|..... .+..-||..-.+-+.++++ |.|..+|..
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgv----------------K~daiPGr~n~l~~~~~~p---G~y~g~CsE 99 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGS----------------QIYAMAGMQTRLHLIANEP---GTYDGICAE 99 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTE----------------EEEECTTCCEEEEECCSSS---EEEEEEECS
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCc----------------EEEecCCceEEEEEEeCCC---eEEEEEccc
Confidence 3588999999999998865 354566654433 3345677777778888887 999999987
Q ss_pred ccCC
Q 008085 293 YATG 296 (578)
Q Consensus 293 ~~~~ 296 (578)
++..
T Consensus 100 ~CG~ 103 (205)
T 1cyx_A 100 ICGP 103 (205)
T ss_dssp CCST
T ss_pred cccc
Confidence 6543
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=60.85 E-value=24 Score=32.03 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=52.6
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|+.|++.|.+.. ..|- |+|-+.+ =-+.+-||....+.|.++.
T Consensus 42 ~l~lP~g~~V~~~lTS~D----ViHS-------F~IP~lg---------------------vK~daiPGr~n~l~~~~~~ 89 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS----VMHS-------FFIPRLG---------------------SQIYAMAGMQTRLHLIANE 89 (205)
T ss_dssp EEEEETTSCEEEEEEESS----SCEE-------EEEGGGT---------------------EEEEECTTCCEEEEECCSS
T ss_pred eEEEeCCCEEEEEEecCC----ceee-------EEecccC---------------------cEEEecCCceEEEEEEeCC
Confidence 578899999999999853 4444 5553221 1123457888889999999
Q ss_pred ceeEEEEeechhhh-hccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHI-SWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~-d~GMm~~~~V~ 559 (578)
||.|...|-.+-.. +..|-..++|.
T Consensus 90 pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 90 PGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CeEEEEEcccccccchhhceEEEEEE
Confidence 99999999876544 45677778776
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=53.06 E-value=42 Score=32.49 Aligned_cols=76 Identities=18% Similarity=0.255 Sum_probs=54.9
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
+.+.++.|+.|++.+.+.+ ..|.|.+=.... -+.+-||....+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~----------------------------k~daiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV----------------------------KQDAVPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SCEEEEEGGGTE----------------------------EEEECTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeCC----ccceeeEcccCc----------------------------eEEecCCceEEEEEEeC
Confidence 3578899999999999853 455554432211 12345777888999999
Q ss_pred CceeEEEEeechh-hhhccceEEEEEecC
Q 008085 534 NPGVWFMHCHFEV-HISWGLKMAWIVLNG 561 (578)
Q Consensus 534 npG~w~~HCHil~-H~d~GMm~~~~V~~~ 561 (578)
.||.|...|.-.- .-+..|-..++|.++
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 9999999998654 446678888888754
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=51.87 E-value=46 Score=31.54 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=52.7
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc-cccc-
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 137 (578)
..|.+..|+.|++.+++. +.- ||..++.- | +. .-.-||..-+..|.+ +++|+|+..|.. .|..
T Consensus 171 n~l~lP~g~~v~~~~tS~-DVi-----Hsf~ip~l----~---~k-~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVI-----HSWTVPAF----G---VK-QDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSC-----EEEEEGGG----T---EE-EEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC-ccc-----ceeeeccc----C---ce-EEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 469999999999999986 222 44443321 1 11 224578888889986 899999999984 3333
Q ss_pred cceeeeEEEeCC
Q 008085 138 ATVYGPLVIFPK 149 (578)
Q Consensus 138 ~Gl~G~liV~~~ 149 (578)
+.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 678888877654
No 145
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=48.00 E-value=42 Score=27.32 Aligned_cols=49 Identities=20% Similarity=0.340 Sum_probs=32.7
Q ss_pred cEEEEEEEecCCCC-eEEEEEcCc-eEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCC
Q 008085 221 KTYLLRLINAALND-ELFFSIANH-SVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKP 279 (578)
Q Consensus 221 ~~~rlRliNa~~~~-~~~~~i~gh-~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~ 279 (578)
-.|+|+|+|.+... .+.|++.|. .+.++ | +. .+.|.|||..++-|...-
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v~~ 83 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSLGA 83 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEEEE
Confidence 36899999999655 567777763 23322 2 11 499999998777665433
No 146
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=47.96 E-value=58 Score=31.45 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=53.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc-ccc-c
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWL-R 137 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~-~ 137 (578)
..|.+..|+.|++.+++.. . | |+..++.- | + +.-.-||..-+..|.+ +++|+|+..|.. .|. .
T Consensus 189 N~lvlP~g~~V~~~ltS~D-V---i--Hsf~iP~l----g---~-k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-V---I--HAWTIPAF----A---V-KQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-S---C--EEEEEGGG----T---E-EEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC-c---c--ceeeEccc----C---c-eEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999852 2 2 33333221 1 1 1224578888889996 899999999984 333 3
Q ss_pred cceeeeEEEeCCC
Q 008085 138 ATVYGPLVIFPKR 150 (578)
Q Consensus 138 ~Gl~G~liV~~~~ 150 (578)
+.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 7788888877654
No 147
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=46.18 E-value=57 Score=30.88 Aligned_cols=76 Identities=20% Similarity=0.370 Sum_probs=53.3
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
+.+.++.|+.|++.+.+.. ..|.|-+=.... ..| +-||....+.|+++
T Consensus 171 n~l~lP~g~~v~~~~tS~D----ViHsf~ip~l~~-------------------------k~d---a~PG~~n~~~~~~~ 218 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD----VIHSWTVPAFGV-------------------------KQD---AVPGRLAQLWFRAE 218 (262)
T ss_dssp SCEEEETTSEEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECBTCCEEEEEECC
T ss_pred ceEEEecCCEEEEEEEECc----ccceeeecccCc-------------------------eEE---ecCCceeEEEEecC
Confidence 3478899999999999853 445544432211 123 44677778899999
Q ss_pred CceeEEEEeechhhh-hccceEEEEEecC
Q 008085 534 NPGVWFMHCHFEVHI-SWGLKMAWIVLNG 561 (578)
Q Consensus 534 npG~w~~HCHil~H~-d~GMm~~~~V~~~ 561 (578)
.||.|...|--.--. +..|-..++|.+.
T Consensus 219 ~~G~y~g~Cse~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 219 REGIFFGQCSELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred CcEEEEEEChHhcccCcccCeEEEEEEcH
Confidence 999999999875533 5567777877653
No 148
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=44.45 E-value=37 Score=28.30 Aligned_cols=70 Identities=19% Similarity=0.369 Sum_probs=39.6
Q ss_pred EEEcCCCCCceEEEecCCEEEEEEE---ecCCC--CeeEEe--ecccccCC-cCCCCCCCccccccCCCCeEEEEEEEC
Q 008085 51 ITVNGQFPGPRIVAREGDRLIIKVV---NHVPN--NISIHW--HGIRQLLS-GWADGPAYITQCPIQTGQSYVYNFTIS 121 (578)
Q Consensus 51 ~~~NG~~pgP~i~~~~Gd~v~v~l~---N~l~~--~~siH~--HG~~~~~~-~~~DG~~~~tq~~i~PG~~~~Y~~~~~ 121 (578)
..++|--+.+.=.+.+|..+.|.+. |.... .+.+|+ .|+.++-. ...|+=-+ ..|||.+|+.++|.+..+
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEeE
Confidence 3444431345667888988888776 22212 223332 35554321 11333212 459999999999997763
No 149
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=43.81 E-value=24 Score=29.51 Aligned_cols=48 Identities=17% Similarity=0.184 Sum_probs=26.9
Q ss_pred EEEEEecCCCC---eeEEeecccccCCc---CCCCCCCccccccCCCCeEEEEEE
Q 008085 71 IIKVVNHVPNN---ISIHWHGIRQLLSG---WADGPAYITQCPIQTGQSYVYNFT 119 (578)
Q Consensus 71 ~v~l~N~l~~~---~siH~HG~~~~~~~---~~DG~~~~tq~~i~PG~~~~Y~~~ 119 (578)
+|++.|....+ .+-||.=-...+.- ..+||-| .|.-|.||++|+|.=-
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg 87 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSG 87 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCC
Confidence 47777877654 44577633321110 1355543 3566899998777543
No 150
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=41.48 E-value=23 Score=29.56 Aligned_cols=48 Identities=21% Similarity=0.206 Sum_probs=26.4
Q ss_pred EEEEEecCCCC---eeEEeecccccCC---cCCCCCCCccccccCCCCeEEEEEE
Q 008085 71 IIKVVNHVPNN---ISIHWHGIRQLLS---GWADGPAYITQCPIQTGQSYVYNFT 119 (578)
Q Consensus 71 ~v~l~N~l~~~---~siH~HG~~~~~~---~~~DG~~~~tq~~i~PG~~~~Y~~~ 119 (578)
+|++.|....+ .+-||.=-...+. -..+||-| .|.-|.||++|+|.=-
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg 86 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYSSG 86 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEeCC
Confidence 47777776554 4456763322111 01345543 3466899998777643
No 151
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=41.22 E-value=35 Score=28.42 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=39.1
Q ss_pred EEcCCCCCceEEEecCCEEEEEEE---ecCCCCeeEEe----ecccccC-CcCCCCCCCccccccCCCCeEEEEEEEC
Q 008085 52 TVNGQFPGPRIVAREGDRLIIKVV---NHVPNNISIHW----HGIRQLL-SGWADGPAYITQCPIQTGQSYVYNFTIS 121 (578)
Q Consensus 52 ~~NG~~pgP~i~~~~Gd~v~v~l~---N~l~~~~siH~----HG~~~~~-~~~~DG~~~~tq~~i~PG~~~~Y~~~~~ 121 (578)
.++|- +.+.=.+.+|..+.|.+. |.......... .|+.++- ....|+=..-+.|||.+|+.++|.+.++
T Consensus 19 ~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 19 NVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 34442 346667888888887776 22222222222 3444431 1113432112469999999999998874
No 152
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=41.15 E-value=63 Score=29.87 Aligned_cols=75 Identities=12% Similarity=0.030 Sum_probs=50.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcceEEecCc-ccc-c
Q 008085 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWL-R 137 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~-~ 137 (578)
..+.+..|..|++.++.. +.- |+..++.- | +. .-.-||..-+..|.+ +++|+|+..|.. .|. .
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DVi-----Hsf~vP~l----g---~K-~DaiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVL-----HSWAVPSL----G---LK-TDAIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSC-----EEEEEGGG----T---EE-EEECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeC-ccc-----ceeeeccc----C---cE-EEecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 689999999999999985 222 33333221 1 11 123568888888886 899999999974 333 2
Q ss_pred cceeeeEEEeCC
Q 008085 138 ATVYGPLVIFPK 149 (578)
Q Consensus 138 ~Gl~G~liV~~~ 149 (578)
+-|.+.+.+.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 667777766654
No 153
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=35.80 E-value=33 Score=29.06 Aligned_cols=48 Identities=19% Similarity=0.201 Sum_probs=26.5
Q ss_pred EEEEEecCCCC---eeEEeecccccCCc---CCCCCCCccccccCCCCeEEEEEE
Q 008085 71 IIKVVNHVPNN---ISIHWHGIRQLLSG---WADGPAYITQCPIQTGQSYVYNFT 119 (578)
Q Consensus 71 ~v~l~N~l~~~---~siH~HG~~~~~~~---~~DG~~~~tq~~i~PG~~~~Y~~~ 119 (578)
.|++.|....+ .+-||.=-...+.- ..+||-| .|.-|.||++|+|.=-
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~YtSg 91 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYTSG 91 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEcCC
Confidence 46777776554 34566533221110 1345543 3466899998777643
No 154
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=35.51 E-value=52 Score=26.17 Aligned_cols=52 Identities=12% Similarity=0.112 Sum_probs=33.2
Q ss_pred EEEEEEEecCCCC---eeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEEC-CCCcc
Q 008085 69 RLIIKVVNHVPNN---ISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTIS-GQRGT 126 (578)
Q Consensus 69 ~v~v~l~N~l~~~---~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~-~~~Gt 126 (578)
.+.|+|+|-|+.+ ..++..|.-... + --+....|.||++..+++... ..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~-----~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQR-----P-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTEE-----E-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCCc-----c-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 5778899999865 446666643211 1 011124599999999998873 55665
No 155
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=34.09 E-value=93 Score=28.70 Aligned_cols=76 Identities=12% Similarity=0.256 Sum_probs=52.5
Q ss_pred eEEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEec
Q 008085 454 KVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533 (578)
Q Consensus 454 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~ad 533 (578)
+.+.++.|+.|++.+.+.+ ..|.|-+=.... ..| .-||..-.+.|+++
T Consensus 140 n~lvlP~~~~Vr~~vtS~D----ViHsf~vP~lg~-------------------------K~D---aiPGr~n~~~~~~~ 187 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED----VLHSWAVPSLGL-------------------------KTD---AIPGRLNQTTLMSS 187 (227)
T ss_dssp SCEEEETTSCEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECTTCCEEEEECCS
T ss_pred ceEEEecCCEEEEEEEeCc----ccceeeecccCc-------------------------EEE---ecCCceEEEEEecC
Confidence 4578899999999999853 455544432211 123 44677777889999
Q ss_pred CceeEEEEeechhhh-hccceEEEEEecC
Q 008085 534 NPGVWFMHCHFEVHI-SWGLKMAWIVLNG 561 (578)
Q Consensus 534 npG~w~~HCHil~H~-d~GMm~~~~V~~~ 561 (578)
.||.|...|.-.--. +.-|-..++|.++
T Consensus 188 ~~G~y~g~Cse~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 188 RPGLYYGQCSEICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred CcEEEEEEehhhcccccccCeEEEEEEcH
Confidence 999999999875543 4567777777653
No 156
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=33.15 E-value=30 Score=29.12 Aligned_cols=44 Identities=20% Similarity=0.337 Sum_probs=0.0
Q ss_pred EEEEEecCCCC---eeEEee-----cccccCCcCCCCCCCccccccCCCCeEEEE
Q 008085 71 IIKVVNHVPNN---ISIHWH-----GIRQLLSGWADGPAYITQCPIQTGQSYVYN 117 (578)
Q Consensus 71 ~v~l~N~l~~~---~siH~H-----G~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~ 117 (578)
+|++.|....+ .+-||. |-..... .+||-| .|.-|.||++|+|.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVG-eqP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQ--GAGVVG-ETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEE--EESBTT-BCCEECTTEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--cCceEc-CCCcCCCCCceEEc
No 157
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=29.37 E-value=1.4e+02 Score=24.27 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=17.3
Q ss_pred CceEEEecCCEEEEEEEecCC
Q 008085 59 GPRIVAREGDRLIIKVVNHVP 79 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l~ 79 (578)
|-+|.++.||++.|.|.-+-.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPt 34 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPT 34 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTT
T ss_pred CcEEEEcCCCEEEEEeCCCCC
Confidence 458999999999999985543
No 158
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=29.31 E-value=68 Score=31.27 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=45.0
Q ss_pred eeEEEecCcEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 213 FKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 213 ~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
..+.++.|+.+||++-... -.+.|.|.+... .+..-||..-.+-+.++++ |.|..+|..
T Consensus 151 n~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~----------------k~DaiPGr~n~~~~~~~~~---G~y~g~CsE 209 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSNS--VMNSFFIPRLGS----------------QIYAMAGMQTRLHLIANEP---GTYDGISAS 209 (315)
T ss_dssp SBCCCCSSSEEEEEECBSS--SCEEEEEGGGTE----------------EEEECBTSCEEEEEECCSC---BCCEEBCCS
T ss_pred ceEEEeCCCEEEEEEEeCC--ccceeeecccCc----------------EEeecCCcceeeEEecCCC---eEEEEeccc
Confidence 3578899999999887554 454555554332 3456678888888888888 999999986
Q ss_pred ccC
Q 008085 293 YAT 295 (578)
Q Consensus 293 ~~~ 295 (578)
++.
T Consensus 210 ~CG 212 (315)
T 1fft_B 210 YSG 212 (315)
T ss_dssp CCS
T ss_pred cch
Confidence 654
No 159
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=25.62 E-value=1.3e+02 Score=29.57 Aligned_cols=16 Identities=25% Similarity=0.297 Sum_probs=13.9
Q ss_pred cccCCCCeEEEEEEEC
Q 008085 106 CPIQTGQSYVYNFTIS 121 (578)
Q Consensus 106 ~~i~PG~~~~Y~~~~~ 121 (578)
..|+||++.+.+|++.
T Consensus 95 ~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVS 110 (343)
T ss_dssp EEECTTCEEEEEEECT
T ss_pred EEeCCCCeEEEEEehh
Confidence 4589999999999984
No 160
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=24.90 E-value=71 Score=26.04 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=28.4
Q ss_pred EEEecCceeEEEEeechhhhhccceEEE-EEecC
Q 008085 529 RFRADNPGVWFMHCHFEVHISWGLKMAW-IVLNG 561 (578)
Q Consensus 529 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~ 561 (578)
.|..+.+|.+-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4566889999999999999999999999 88654
No 161
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=23.80 E-value=83 Score=29.13 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=37.4
Q ss_pred ceEEEecCCEEEEEEEecCC------CCeeEEeecccccCCcCCCCCCCccccccCCCCeEEEEEEECCCCcce
Q 008085 60 PRIVAREGDRLIIKVVNHVP------NNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTL 127 (578)
Q Consensus 60 P~i~~~~Gd~v~v~l~N~l~------~~~siH~HG~~~~~~~~~DG~~~~tq~~i~PG~~~~Y~~~~~~~~Gt~ 127 (578)
-+|+.+-|-++.|.|.|..+ .+.++..-|....-. .-++..+.||+++| + .+|+|
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-------aG~~i~L~PGESiT----l--~Pg~~ 189 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-------AGSQLRLSPGESIC----L--PPGLY 189 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-------TTCEEEECTTCEEE----E--CTTEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-------CCCEEEECCCCeEe----c--CCCCE
Confidence 47888888899999999863 356666666654432 11346789999766 4 46664
No 162
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=23.65 E-value=1.3e+02 Score=29.56 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=0.0
Q ss_pred EEEEEEEEEeecCceeeEE---EEEcCCCCCceEEEecCCEEEEEEEecCCCCeeEEee-------cccccCCcCCCCCC
Q 008085 32 YKFDIKMQNVTRLCHTKSI---ITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWH-------GIRQLLSGWADGPA 101 (578)
Q Consensus 32 ~~l~~~~~~~~~~g~~~~~---~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~siH~H-------G~~~~~~~~~DG~~ 101 (578)
.+..++.+++..-|+...+ ++=||.-| +++.+=.+-.||+.|..-....--.- |+.+...
T Consensus 250 V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~p---vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~------- 319 (382)
T 1yew_A 250 VSVKVEDATYRVPGRAMRMKLTITNHGNSP---IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDN------- 319 (382)
T ss_dssp EEEEEEEEEEESSCSEEEEEEEEEECSSSC---EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCC-------
T ss_pred eEEEeeccEEecCCcEEEEEEEEEcCCCCc---eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCC-------
Q ss_pred CccccccCCCCeEEEEEEECCCC
Q 008085 102 YITQCPIQTGQSYVYNFTISGQR 124 (578)
Q Consensus 102 ~~tq~~i~PG~~~~Y~~~~~~~~ 124 (578)
.||+|||+.+.+.++ +.+
T Consensus 320 ----~pI~PGETr~~~v~a-~da 337 (382)
T 1yew_A 320 ----SPLAPGETRTVDVTA-SDA 337 (382)
T ss_dssp ----SCBCTTCEEEEEEEE-ECH
T ss_pred ----CCcCCCceeEEEEEe-ehH
No 163
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=23.03 E-value=36 Score=28.41 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=15.1
Q ss_pred EEEecCcEEEEEEEecC
Q 008085 215 LKVKPGKTYLLRLINAA 231 (578)
Q Consensus 215 ~~v~~G~~~rlRliNa~ 231 (578)
|+|++||++||.+.|-+
T Consensus 73 InV~~GETVrF~v~nkt 89 (131)
T 2wtp_A 73 VNVDSGETVAFRAGEKI 89 (131)
T ss_dssp EEEETTCEEEEEETTEE
T ss_pred EEecCCCEEEEEeCCcE
Confidence 89999999999888876
No 164
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=22.80 E-value=1.8e+02 Score=22.44 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=38.5
Q ss_pred EecCcEEEEEEEecCCCCeEEEEEcCc--eEEEEEeCCCCCCceEEeE--EEECCCceEEEEEEeCCCCCCcceEEEecc
Q 008085 217 VKPGKTYLLRLINAALNDELFFSIANH--SVTVVDVDAIYIKSFQTDI--LLITPGQTTNILLKAKPSYPNATFLMSARP 292 (578)
Q Consensus 217 v~~G~~~rlRliNa~~~~~~~~~i~gh--~~~via~DG~~~~P~~~~~--l~l~pGeR~dvlv~~~~~~~~g~y~l~~~~ 292 (578)
-++||++++|++-...... . ..+- .+++..-+|. .+.. ........++.-+..+.....|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~-p--~~~~~~~v~l~dp~g~-----~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH-P--LNELIPLVYIQDPKGN-----RIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC-B--CCCEEEEEEEECTTSC-----EEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc-C--CCCCceEEEEECCCCC-----EEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 4789999999875532111 0 1111 2344434443 2222 233345567777777765555999999863
No 165
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.54 E-value=1.6e+02 Score=27.19 Aligned_cols=51 Identities=18% Similarity=0.265 Sum_probs=29.7
Q ss_pred eeEEEecCcEEEEEEEecCCC-----CeEEEEEcCceEEEEEeCCCCCCceEEeEEEECCCceEEE
Q 008085 213 FKLKVKPGKTYLLRLINAALN-----DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNI 273 (578)
Q Consensus 213 ~~~~v~~G~~~rlRliNa~~~-----~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGeR~dv 273 (578)
..|..+-|-.+.++|-|.+.. ....+.++|...++- .-..|.|.|||.+.+
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~----------aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT----------AGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC----------TTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC----------CCCEEEECCCCeEec
Confidence 455556665566677666533 233444444443331 136889999999876
No 166
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=21.31 E-value=71 Score=31.14 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=50.5
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcceeeeecCCcEEEEEEEecC
Q 008085 455 VVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN 534 (578)
Q Consensus 455 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v~~~~~~~irf~adn 534 (578)
.+.++.|+.|++.+.+.+ ..|.|.+=.... ..| +-||-...+.|+++.
T Consensus 152 ~l~lP~g~~V~~~lTS~D----ViHsf~IP~lg~-------------------------k~D---aiPGr~n~~~~~~~~ 199 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS----VMNSFFIPRLGS-------------------------QIY---AMAGMQTRLHLIANE 199 (315)
T ss_dssp BCCCCSSSEEEEEECBSS----SCEEEEEGGGTE-------------------------EEE---ECBTSCEEEEEECCS
T ss_pred eEEEeCCCEEEEEEEeCC----ccceeeecccCc-------------------------EEe---ecCCcceeeEEecCC
Confidence 356789999999998743 445544432211 123 446777888999999
Q ss_pred ceeEEEEeechhhh-hccceEEEEEe
Q 008085 535 PGVWFMHCHFEVHI-SWGLKMAWIVL 559 (578)
Q Consensus 535 pG~w~~HCHil~H~-d~GMm~~~~V~ 559 (578)
||.|...|-..--. +..|-..++|.
T Consensus 200 ~G~y~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 200 PGTYDGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp CBCCEEBCCSCCSTTTTTCCEECCBC
T ss_pred CeEEEEeccccchhhHHhccceEEEe
Confidence 99999999875544 45676777766
No 167
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=21.21 E-value=1.1e+02 Score=25.78 Aligned_cols=70 Identities=9% Similarity=-0.020 Sum_probs=0.0
Q ss_pred EEecCCEEEEEEEecCCCCeeEEeecccccCCcCCCCCCCc----------cccccCCCCeEEEEEEECCCCcceEEecC
Q 008085 63 VAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI----------TQCPIQTGQSYVYNFTISGQRGTLFWHAH 132 (578)
Q Consensus 63 ~~~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DG~~~~----------tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H 132 (578)
+++.||+|+.+..+. .+.|-.+ ...+|.-..+-...|++...+|++||-|-
T Consensus 31 ~F~vGD~LvF~y~~~-------------------~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~~~G~~YFicg 91 (138)
T 1jer_A 31 TFRVGDSLQFNFPAN-------------------AHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCT 91 (138)
T ss_dssp CEETTCEEEECCCTT-------------------TCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECCSSEEEEEECC
T ss_pred cCcCCCEEEEeecCC-------------------CceEEEeCchhhcCccCCCCccccccCCCeEEEeccCCcCEEEEcC
Q ss_pred ccccc-cceeeeEEEeCCCC
Q 008085 133 ISWLR-ATVYGPLVIFPKRG 151 (578)
Q Consensus 133 ~~~~~-~Gl~G~liV~~~~~ 151 (578)
..+.= .||...|.|.....
T Consensus 92 ~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 92 VGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp STTTGGGTCEEEEEEECCC-
T ss_pred CCCccccCCEEEEEEcCCCC
No 168
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=20.59 E-value=89 Score=25.43 Aligned_cols=34 Identities=9% Similarity=0.102 Sum_probs=26.2
Q ss_pred EEEEECCCCcceEEecCcccc-ccceeeeE-EEeCCC
Q 008085 116 YNFTISGQRGTLFWHAHISWL-RATVYGPL-VIFPKR 150 (578)
Q Consensus 116 Y~~~~~~~~Gt~wYH~H~~~~-~~Gl~G~l-iV~~~~ 150 (578)
..+++ ..+|++||-|-..+. ..||..+| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 46777 789999999987554 38999999 887654
No 169
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=20.41 E-value=2.5e+02 Score=22.83 Aligned_cols=20 Identities=15% Similarity=0.204 Sum_probs=15.6
Q ss_pred CceEEEecCCEEEEEEEecC
Q 008085 59 GPRIVAREGDRLIIKVVNHV 78 (578)
Q Consensus 59 gP~i~~~~Gd~v~v~l~N~l 78 (578)
|-+|.++.||++.|.|.-+-
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NP 31 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNP 31 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCC
Confidence 34699999999999996443
No 170
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=20.37 E-value=80 Score=26.20 Aligned_cols=50 Identities=12% Similarity=0.138 Sum_probs=29.3
Q ss_pred EEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCCC----ceEEeEEEECCCceEEEE
Q 008085 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK----SFQTDILLITPGQTTNIL 274 (578)
Q Consensus 222 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----P~~~~~l~l~pGeR~dvl 274 (578)
.|++||-|.+... +.|-...+.+...||..-+ .+....=.|.|||.+..-
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 4789999998543 3555556666666654210 111123478888866543
No 171
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=20.28 E-value=33 Score=27.07 Aligned_cols=24 Identities=29% Similarity=0.257 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCceEEEecCCEEEE
Q 008085 49 SIITVNGQFPGPRIVAREGDRLII 72 (578)
Q Consensus 49 ~~~~~NG~~pgP~i~~~~Gd~v~v 72 (578)
..+.+||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 568999998888889999999987
No 172
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=20.04 E-value=93 Score=25.83 Aligned_cols=49 Identities=14% Similarity=0.204 Sum_probs=28.1
Q ss_pred EEEEEEEecCCCCeEEEEEcCceEEEEEeCCCCC----CceEEeEEEECCCceEEE
Q 008085 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAIYI----KSFQTDILLITPGQTTNI 273 (578)
Q Consensus 222 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----~P~~~~~l~l~pGeR~dv 273 (578)
.|++||-|.+... +.|-...+.+...||..- +.+....=.|.|||.+..
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 4789999998543 344445566655555421 111123347888886654
Done!