BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008090
(578 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/548 (29%), Positives = 253/548 (46%), Gaps = 63/548 (11%)
Query: 34 RHYTFNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHV-SNNVTIHWHG 92
RHY + ++Y C+ ++ +NGQFPGP++ A GD V++++TN + + V IHWHG
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 93 VRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHISWLRST-LYGPIIIL 151
+ Q + WADG A ++QC I G+++ YNFT+ GT +H H+ RS LYG +I+
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTVD-NPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 152 PKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGP------------------ 193
P + + PF EI +L +W++ ++I Q + + P
Sbjct: 123 PPQGKKEPFHY-DGEINLLLSDWWH---QSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 194 --NVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTV 251
+++ Y N P L S Y V P KTY +R+ + L F+I NH L V
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 252 VEADAVYVKPFDTDKLLITPGQTANVLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAG 311
VEAD YV+PF T + I G++ +VL+ T P+ +++ G +T G
Sbjct: 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQN-PSENYWVSV-----GTRARHPNTPPG 292
Query: 312 ILEYKHPSNHSISSKKLQLYKPTLPSINDTSFAVNFTRKFRSLASVKYPANVPQIVDRKF 371
+ + N SK P P+ +D + NFT +R A++ P P +R+
Sbjct: 293 LTLLNYLPNSV--SKLPTSPPPQTPAWDDFDRSKNFT--YRITAAMGSP-KPPVKFNRRI 347
Query: 372 FFTVGLGSNPCPKNTTCQGPNGTKFSASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPV 431
F Q ++N+VS LP T L + + + F
Sbjct: 348 FLL------------NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHA-----FDQ 390
Query: 432 KPP---MPFNY-TGTPPNNTNVSNGTRTVLLPFNTSVELVMQDTSILG---AESHPLHLH 484
PP P +Y TPP N G V++++Q+ +++ +E+HP HLH
Sbjct: 391 NPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLH 450
Query: 485 XXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAGGWVAIRFFADNPGVWFMHCHL 544
+ +++ + NL +P RNT+ + GW AIRF ADNPGVW HCH+
Sbjct: 451 GHDFWVLGYGDGKFSAEEE-SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHI 509
Query: 545 DVHTSWGL 552
+ H G+
Sbjct: 510 EPHLHMGM 517
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 530 FFADNPGVWFMHCHLDVHTSWGLRMAWIVQ 559
F DNPG +F H HL + S GL + IV
Sbjct: 93 FTVDNPGTFFYHGHLGMQRSAGLYGSLIVD 122
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 210/512 (41%), Gaps = 78/512 (15%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPA 105
+R I VN FP P + +GDR + V ++++N + +IHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
+V QCPI TG ++ Y+F + Q GT +H+H+S L GPI++ P + +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKP 223
I +W+++ A + GA +DA INGL G + D + V
Sbjct: 141 DDSTVITLADWYHL--------AAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 224 GKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKP 283
GK Y RL++ + + FSI H+LTV+EAD+V +KP D L I Q + +L
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 284 YFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSF 343
N ++++A P SG T + IL Y + ++ PS N
Sbjct: 252 DVDN--YWIRALPN-SGTQNFAGGTNSAILRYD-------GAAPVEPTTSQTPSTNPLVE 301
Query: 344 AVNFTRKFRSLASVKYPANVPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSASVNNV 403
+ T K + P V ++ F F G + ++N
Sbjct: 302 SALTTLKGTAAPGSPTPGGVDLALNMAFGFAGG--------------------NFTINGA 341
Query: 404 SFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLPFNTS 463
SF P+ +L G + ++ LP N
Sbjct: 342 SFTPPTVPVLLQILSGAQSAA-----------------------DLLPAGSVYSLPANAD 378
Query: 464 VELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPA- 522
+E+ + T+ HP HLH +N +P+ R+ + A
Sbjct: 379 IEISLPATAAAPGFPHPFHLHGHVFAVVRSAGSS--------TYNYANPVYRDVVSTGAP 430
Query: 523 GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
G V IRF DNPG WF+HCH+D H G +
Sbjct: 431 GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 210/512 (41%), Gaps = 78/512 (15%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPA 105
+R I VN FP P + +GDR + V ++++N + +IHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
+V QCPI TG ++ Y+F + Q GT +H+H+S L GPI++ P + +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKP 223
I +W+++ A + GA +DA INGL G + D + V
Sbjct: 141 DDSTVITLADWYHL--------AAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 224 GKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKP 283
GK Y RL++ + + FSI H+LTV+EAD+V +KP D L I Q + +L
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 284 YFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSF 343
N ++++A P SG T + IL Y + ++ PS N
Sbjct: 252 DVDN--YWIRALPN-SGTQNFAGGTNSAILRYD-------GAAPVEPTTSQTPSTNPLVE 301
Query: 344 AVNFTRKFRSLASVKYPANVPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSASVNNV 403
+ T K + P V ++ F F G + ++N
Sbjct: 302 SALTTLKGTAAPGSPTPGGVDLALNMAFGFAGG--------------------NFTINGA 341
Query: 404 SFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLPFNTS 463
SF P+ +L G + ++ LP N
Sbjct: 342 SFTPPTVPVLLQILSGAQSAA-----------------------DLLPAGSVYSLPANAD 378
Query: 464 VELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPA- 522
+E+ + T+ HP HLH +N +P+ R+ + A
Sbjct: 379 IEISLPATAAAPGFPHPFHLHGHVFAVVRSAGSS--------TYNYANPVYRDVVSTGAP 430
Query: 523 GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
G V IRF DNPG WF+HCH+D H G +
Sbjct: 431 GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 215/519 (41%), Gaps = 92/519 (17%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPA 105
+R I VN FP P + +GDR + V ++++N + +IHWHG Q + WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIILPKRNESYPFQKPH 164
+V QCPI TG ++ Y+F + Q GT +H+H+S L GPI++ Y Q PH
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV-------YDPQDPH 133
Query: 165 KEI--------PILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDT 216
K + I +W+++ A + G+ +DA INGL G + + D
Sbjct: 134 KSLYDVDDDSTVITLADWYHL--------AAKVGSPVPTADATLINGL-GRSIDTLNADL 184
Query: 217 YKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTAN 276
+ V GK Y RL++ + + FSI H+LTV+EAD+V +KP D + I Q +
Sbjct: 185 AVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYS 244
Query: 277 VLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLP 336
+L N ++++A P SG D + IL Y + ++ P
Sbjct: 245 FVLNADQDVGN--YWIRALPN-SGTRNFDGGVNSAILRYD-------GAAPVEPTTSQTP 294
Query: 337 SINDTSFAVNFTRKFRSLASVKYPANVPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKF 396
S N + T + + P V ++ F F G KF
Sbjct: 295 STNPLVESALTTLEGTAAPGSPAPGGVDLALNMAFGFA------------------GGKF 336
Query: 397 SASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTV 456
++N SF P+ +L G + ++
Sbjct: 337 --TINGASFTPPTVPVLLQILSGAQSA-----------------------QDLLPSGSVY 371
Query: 457 LLPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERN 516
LP N +E+ + T+ HP HLH +N +P+ R+
Sbjct: 372 SLPANADIEISLPATAAAPGFPHPFHLHGHTFAVVRSAGSS--------TYNYENPVYRD 423
Query: 517 TIGVPA-GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
+ + G V IRF DNPG WF+HCH+D H G +
Sbjct: 424 VVSTGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 210/518 (40%), Gaps = 90/518 (17%)
Query: 52 RNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV-----TIHWHGVRQVTSGWADGPAY 106
R I VN FP P + GD + + N ++N+ +IHWHG Q + WADGPA+
Sbjct: 22 RAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAF 81
Query: 107 VTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKPH 164
+ QCPI +G S+ Y+F + GQ GT +H+H+S L GP ++ P + +
Sbjct: 82 INQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVDD 141
Query: 165 KEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPG 224
+ I +W++V A + GA D+ INGL G + + D + V G
Sbjct: 142 ESTVITLADWYHV--AAKLGPRFPKGA-----DSTLINGL-GRSTSTPTADLAVISVTKG 193
Query: 225 KTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKPY 284
K Y RL++ + + FSI +H LTV+EAD V +P D + I Q + +L
Sbjct: 194 KRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQD 253
Query: 285 FPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSFA 344
N ++++A P F G D +A IL Y P P N T
Sbjct: 254 VDN--YWIRANPNFGTTGFADGVNSA-ILRYDDA-------------DPVEPVTNQTGTT 297
Query: 345 VNFTRKFRSLASVKYPANVPQ-----IVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSAS 399
+ L S+ P N Q ++ F F +GT F
Sbjct: 298 LLLETDLHPLTSMPVPGNPTQGGADLNLNMAFNF------------------DGTNF--F 337
Query: 400 VNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLP 459
+N SF P+ +L G N ++ LP
Sbjct: 338 INGESFTPPTVPVLLQIISGANTA-----------------------QDLLPSGSVYSLP 374
Query: 460 FNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTI- 518
N+S+E+ T+ HP HLH ++N DP+ R+ +
Sbjct: 375 SNSSIEITFPATTAAPGAPHPFHLHGHVFAVVRSAGS--------TSYNYDDPVWRDVVS 426
Query: 519 -GVP-AGGWVAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
G P AG V IRF DNPG WF+HCH+D H G +
Sbjct: 427 TGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAV 464
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 216/516 (41%), Gaps = 81/516 (15%)
Query: 52 RNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPAY 106
R+ I VNG FP P + ++GDR + V + ++N + +IHWHG Q + WADGPA+
Sbjct: 22 RDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAF 81
Query: 107 VTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKPH 164
V QCPI +G S+ Y+F + Q GT +H+H+S L GP ++ PK + + +
Sbjct: 82 VNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDN 141
Query: 165 KEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPG 224
+ I +W++ A + GA DA INGL G + + + V+ G
Sbjct: 142 ESTVITLTDWYHT--AARLGPRFPLGA-----DATLINGL-GRSASTPTAALAVINVQHG 193
Query: 225 KTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKPY 284
K Y RL++ + + FSI H LTV+E D + +P D + I Q + +L
Sbjct: 194 KRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQT 253
Query: 285 FPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSFA 344
N ++++A P F +G + IL Y + + +PT + TS
Sbjct: 254 VGN--YWIRANPNFGTVG-FAGGINSAILRY----------QGAPVAEPT--TTQTTSVI 298
Query: 345 VNFTRKFRSLASVKYPAN-VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSASVNNV 403
LA + P + P VD+ NGT F +NN
Sbjct: 299 PLIETNLHPLARMPVPGSPTPGGVDKALNLAFNF--------------NGTNF--FINNA 342
Query: 404 SFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLPFNTS 463
SF P+ +L G P P LP +++
Sbjct: 343 SFTPPTVPVLLQILSGAQTA--QDLLPAGSVYP---------------------LPAHST 379
Query: 464 VELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTI--GVP 521
+E+ + T++ HP HLH +N DP+ R+ + G P
Sbjct: 380 IEITLPATALAPGAPHPFHLHGHAFAVVRSAGS--------TTYNYNDPIFRDVVSTGTP 431
Query: 522 AGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
A G V IRF DNPG WF+HCH+D H G + +
Sbjct: 432 AAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVF 467
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 218/515 (42%), Gaps = 83/515 (16%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV-----TIHWHGVRQVTSGWADGPA 105
R + VNG P P + +GDR + V + ++N+ +IHWHG Q + WADGPA
Sbjct: 21 AREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
+V QCPI +G S+ Y+F + Q GT +H+H+S L GP ++ P + +
Sbjct: 81 FVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDID 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAG-PNVSDAYTINGLPGPLYNCSSKDTYKLKVK 222
+ + I +W++V A + G P SD+ INGL G + D +KV
Sbjct: 141 NDDTVITLADWYHV--------AAKLGPRFPFGSDSTLINGL-GRTTGIAPSDLAVIKVT 191
Query: 223 PGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTK 282
GK Y RL++ + + FSI NHT+T++EAD++ +P + D + I Q + +L
Sbjct: 192 QGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDAS 251
Query: 283 PYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTS 342
P ++++A P F G + IL Y +S + KP +N+
Sbjct: 252 Q--PVDNYWIRANPAFGNTG-FAGGINSAILRYDGAPEIEPTSVQTTPTKP----LNEV- 303
Query: 343 FAVNFTRKFRSLASVKYPAN-VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSASVN 401
L+ + P + P VD+ NGT F +N
Sbjct: 304 -------DLHPLSPMPVPGSPEPGGVDKPLNLVFNF--------------NGTNF--FIN 340
Query: 402 NVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLPFN 461
+ +FV PS +L +G V G+ +LP N
Sbjct: 341 DHTFVPPSVPVLLQIL----------------------SGAQAAQDLVPEGS-VFVLPSN 377
Query: 462 TSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTI--G 519
+S+E+ T+ HP HLH +N +P+ R+ + G
Sbjct: 378 SSIEISFPATANAPGFPHPFHLHGHAFAVVRSAGSSV--------YNYDNPIFRDVVSTG 429
Query: 520 VPAGGWVAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
P G V IRF +NPG WF+HCH+D H G +
Sbjct: 430 QP-GDNVTIRFETNNPGPWFLHCHIDFHLDAGFAV 463
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 225/542 (41%), Gaps = 102/542 (18%)
Query: 38 FNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHG 92
I +VT TR + NG FPGP + +GD I V ++++N TIHWHG
Sbjct: 8 LTISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHG 67
Query: 93 VRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL 151
+ Q + WADGPA+V QCPI +G S+ Y+FT+ Q GT +H+H+S L GP+++
Sbjct: 68 LFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVY 127
Query: 152 -PKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYN 210
P + + I +W++ + A A P +D+ INGL G
Sbjct: 128 DPSDPYASMYDVDDDTTVITLSDWYH-------TAAKLGPAFPPNADSVLINGL-GRFAG 179
Query: 211 CSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLIT 270
++ D + V+ K Y RL++ + + FSI H +T++E D V +P + D + I
Sbjct: 180 GNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIF 239
Query: 271 PGQTANVLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAG----ILEYKHPSNHSISSK 326
Q + +L N ++++A P GTID TT G IL Y S I
Sbjct: 240 ASQRYSFVLNATQSVDN--YWIRAIP---NTGTID--TTGGLNSAILRY---SGADIVDP 289
Query: 327 KLQLYKPTLPSINDTSFAVNFTRKFRSLASVKYPAN-----VPQIVDRKFFFTVGLGSNP 381
+P + L S P + V ++ F F
Sbjct: 290 TANATTSVIPLVE---------TDLVPLDSPAAPGDPVVGGVDLAMNLDFSF-------- 332
Query: 382 CPKNTTCQGPNGTKFSASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTG 441
NGT F +NN + + P+ +L G + +D +P
Sbjct: 333 ----------NGTNF--FINNETLIPPTVPVLLQILSGAQSA---SDL-----LPTGSVY 372
Query: 442 TPPNNTNVSNGTRTVLLPFNTSVELVMQDTSILGAES-----HPLHLHXXXXXXXXXXXX 496
T P N+++EL T++ G + HP HLH
Sbjct: 373 TLP---------------LNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVVRSAGS 417
Query: 497 XYDPDKDLMNFNLVDPMERNTI--GVPAGGWVAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
++N V+P+ R+T+ G P G V IRF DN G WF+HCH+D H G +
Sbjct: 418 S--------DYNYVNPVRRDTVSTGNP-GDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAI 468
Query: 555 AW 556
+
Sbjct: 469 VF 470
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 215/520 (41%), Gaps = 91/520 (17%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPA 105
+R + VNG PGP + GDR + V ++++N + +IHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
++ QCPI G S+ Y+F + Q GT +H+H+S L GP ++ P + +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAG-PNVSDAYTINGLPGPLYNCSSKDTYKLKVK 222
+ + I +W++ A + G P +DA ING G + S + +KV
Sbjct: 141 NDDTVITLADWYHT--------AAKLGPRFPGGADATLING-KGRAPSDSVAELSVIKVT 191
Query: 223 PGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTK 282
GK Y RL++ + N FSI H LT++E D+V +P + D + I Q + +L
Sbjct: 192 KGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDAN 251
Query: 283 PYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTS 342
N ++++A P F +G D + IL Y ++ + KP +N+
Sbjct: 252 QAVDN--YWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPTTNQTTSVKP----LNEV- 303
Query: 343 FAVNFTRKFRSLASVKYPAN-----VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFS 397
L S P + V + ++ F F NG+ F
Sbjct: 304 -------DLHPLVSTPVPGSPSSGGVDKAINMAFNF------------------NGSNF- 337
Query: 398 ASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVL 457
+N SFV P+ +L G ++ +
Sbjct: 338 -FINGASFVPPTVPVLLQILSGAQTA-----------------------QDLLPSGSVYV 373
Query: 458 LPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNT 517
LP N S+E+ T+ HP HLH +N +P+ R+
Sbjct: 374 LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDV 425
Query: 518 I--GVPAGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
+ G PA G V IRF +NPG WF+HCH+D H G +
Sbjct: 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 214/520 (41%), Gaps = 91/520 (17%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPA 105
+R + VNG PGP + GDR + V ++++N + +IHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
++ QCPI G S+ Y+F + Q GT +H+H+S L GP ++ P + +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAG-PNVSDAYTINGLPGPLYNCSSKDTYKLKVK 222
+ + I +W++ A + G P +DA ING G + S + +KV
Sbjct: 141 NDDTVITLADWYHT--------AAKLGPRFPGGADATLING-KGRAPSDSVAELSVIKVT 191
Query: 223 PGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTK 282
GK Y RL++ + N FSI H LT++E D+V +P + D + I Q + +L
Sbjct: 192 KGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDAN 251
Query: 283 PYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTS 342
N ++++A P F +G D + IL Y ++ + KP +N+
Sbjct: 252 QAVDN--YWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPTTNQTTSVKP----LNEV- 303
Query: 343 FAVNFTRKFRSLASVKYP-----ANVPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFS 397
L S P V + ++ F F NG+ F
Sbjct: 304 -------DLHPLVSTPVPGAPSSGGVDKAINMAFNF------------------NGSNF- 337
Query: 398 ASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVL 457
+N SFV P+ +L G ++ +
Sbjct: 338 -FINGASFVPPTVPVLLQILSGAQTA-----------------------QDLLPSGSVYV 373
Query: 458 LPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNT 517
LP N S+E+ T+ HP HLH +N +P+ R+
Sbjct: 374 LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYDNPIFRDV 425
Query: 518 I--GVPAGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
+ G PA G V IRF +NPG WF+HCH+D H G +
Sbjct: 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 207/514 (40%), Gaps = 78/514 (15%)
Query: 52 RNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPAY 106
R ++ G FPGP + GD I N + + +IHWHG Q + WADGPA+
Sbjct: 23 RPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF 82
Query: 107 VTQCPIQTGQSYTYNFTITGQRGTLLWHAHI-SWLRSTLYGPIIIL-PKRNESYPFQKPH 164
+TQCPI G S++YNF + G GT +H+H+ + L GP ++ P ++ +
Sbjct: 83 ITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDD 142
Query: 165 KEIPILFGEWFNVDPEAIISQALQTGAGPNV-SDAYTINGLPGPLYNCSSKDTYKLKVKP 223
I +W++V A + GAG + +D+ I+GL N ++ + V+
Sbjct: 143 DTTIITLADWYHV-------LAKEMGAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEV 195
Query: 224 GKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKP 283
GK Y +RL++ + + FSI H +T++E D V + D++ I Q + +L
Sbjct: 196 GKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQ 255
Query: 284 YFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSF 343
P ++++A P G G D + IL Y + + ++ L
Sbjct: 256 --PVGNYWIRANPNSGGEG-FDGGINSAILRYDGATTADPVTVASTVHTKCL-------- 304
Query: 344 AVNFTRKFRSLASVKYPANVPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSASVNNV 403
L+ P N Q G C N + G +N V
Sbjct: 305 ---IETDLHPLSRNGVPGNPHQ------------GGADCNLNLSLGFACGNFV---INGV 346
Query: 404 SFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLPFNTS 463
SF P+ +L G N P+ + +S LP N++
Sbjct: 347 SFTPPTVPVLLQICSGANTAADLL----------------PSGSVIS-------LPSNST 383
Query: 464 VELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPA- 522
+E+ + + G HP HLH N DP+ R+ + +
Sbjct: 384 IEIALPAGAAGG--PHPFHLHGHDFAVSESASNSTS--------NYDDPIWRDVVSIGGV 433
Query: 523 GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
G V IRF DNPG WF+HCH+D H G + +
Sbjct: 434 GDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF 467
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 213/521 (40%), Gaps = 89/521 (17%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGPA 105
+R + VNG PGP + GDR + V ++++N + +IHWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
++ QCPI +G S+ Y+F + Q GT +H+H+S L GP ++ P + +
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKP 223
+ + I +W++V A + A GA DA ING G + ++ D + V P
Sbjct: 141 NDDTVITLVDWYHV--AAKLGPAFPLGA-----DATLING-KGRSPSTTTADLSVISVTP 192
Query: 224 GKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKP 283
GK Y RL++ + + FSI H +T++E D++ P D + I Q + +L
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQ 252
Query: 284 YFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSF 343
N ++++A P F +G + IL Y + ++ + P L +N
Sbjct: 253 AVDN--YWIRANPNFGNVG-FTGGINSAILRYDGAAAVEPTTTQTTSTAP-LNEVN---- 304
Query: 344 AVNFTRKFRSLASVKYPAN-----VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSA 398
L + P + V ++ F F NGT F
Sbjct: 305 -------LHPLVATAVPGSPVAGGVDLAINMAFNF------------------NGTNF-- 337
Query: 399 SVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLL 458
+N SF P+ +L G N ++ L
Sbjct: 338 FINGASFTPPTVPVLLQIISGAQNA-----------------------QDLLPSGSVYSL 374
Query: 459 PFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTI 518
P N +E+ T+ HP HLH +N +P+ R+ +
Sbjct: 375 PSNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTV--------YNYDNPIFRDVV 426
Query: 519 --GVPAGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
G PA G V IRF DNPG WF+HCH+D H G + +
Sbjct: 427 STGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 212/519 (40%), Gaps = 89/519 (17%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV-----TIHWHGVRQVTSGWADGPA 105
+R + VNG PGP + GDR + V ++++N+ ++HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
++ QCPI G S+ Y+F + Q GT +H+H+S L GP ++ P + +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKP 223
+ + I +W++ A + GA DA ING G + +S + +KV
Sbjct: 141 NDDTVITLADWYHT--AAKLGPRFPAGA-----DATLING-KGRAPSDTSAELSVIKVTK 192
Query: 224 GKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKP 283
GK RL++ + + FSI H LT++E D+ +P D + I Q + +L
Sbjct: 193 GKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQ 252
Query: 284 YFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSF 343
N ++++A P F +G + + IL Y ++ + KP L +N
Sbjct: 253 AVDN--YWIRANPNFGNVG-FNGGINSAILRYDGAPAVEPTTNQTTSVKP-LNEVN---- 304
Query: 344 AVNFTRKFRSLASVKYPAN-----VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSA 398
L S P + V + ++ F F NG+ F
Sbjct: 305 -------LHPLVSTPVPGSPSSGGVDKAINMAFNF------------------NGSNF-- 337
Query: 399 SVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLL 458
+N SFV PS +L G ++ +L
Sbjct: 338 FINGASFVPPSVPVLLQILSGAQTA-----------------------QDLLPSGSVXVL 374
Query: 459 PFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTI 518
P N S+E+ T+ HP HLH +N +P+ R+ +
Sbjct: 375 PSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV--------YNYSNPIFRDVV 426
Query: 519 --GVPAGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
G PA G V IRF +NPG WF+HCH+D H G +
Sbjct: 427 STGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 215/520 (41%), Gaps = 91/520 (17%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV-----TIHWHGVRQVTSGWADGPA 105
+R + VNG PGP + GDR + V ++++N+ ++HWHG Q + WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
++ QCPI G S+ Y+F + Q GT +H+H+S L GP ++ P + +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTG-AGPNVSDAYTINGLPGPLYNCSSKDTYKLKVK 222
+ + I +W++ A + G A PN +D+ ING G + SS + V
Sbjct: 141 NDDTTITLADWYHT--------AAKLGPAFPNGADSTLING-KGRAPSDSSAQLSVVSVT 191
Query: 223 PGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTK 282
GK RL++ + + FSI H T++E D+V +P +TD + I Q + L
Sbjct: 192 KGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNAN 251
Query: 283 PYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTS 342
N ++++A P F +G + + IL Y ++ + +P +N+T
Sbjct: 252 QAVDN--YWIRANPNFGNVG-FNGGINSAILRYDGAPAVEPTTNQSTSTQP----LNET- 303
Query: 343 FAVNFTRKFRSLASVKYPAN-----VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFS 397
L S P + V + ++ F F NG+ F
Sbjct: 304 -------NLHPLVSTPVPGSPAAGGVDKAINMAFNF------------------NGSNF- 337
Query: 398 ASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVL 457
+N SF PS +L G + +P T
Sbjct: 338 -FINGASFTPPSVPVLLQILSGAQT--------AQDLLPSGSVXT--------------- 373
Query: 458 LPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNT 517
LP N S+E+ T+ HP HLH +N +P+ R+
Sbjct: 374 LPSNASIEISFPATAAAPGAPHPFHLHGHVFAVVRSAGSTV--------YNYSNPIFRDV 425
Query: 518 I--GVPAGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRM 554
+ G PA G V IRF +NPG WF+HCH+D H G +
Sbjct: 426 VSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 229/537 (42%), Gaps = 94/537 (17%)
Query: 33 TRHYTFNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-NVTIHWH 91
T ++T Y NV L +R +I+ NGQFP P + +GDRV I +TN ++N N ++H+H
Sbjct: 4 TFNWTTGWDYRNVDGL-KSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFH 62
Query: 92 GVRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIII 150
G+ Q + DG ++TQCPI G + YNFT+ GT +H+H + G II
Sbjct: 63 GLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFII 122
Query: 151 LPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYN 210
+++S+P+ +E+ + EW++ D ++++ + P ++ N + N
Sbjct: 123 ---KDDSFPYDYD-EELSLSLSEWYH-DLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN 177
Query: 211 CSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLIT 270
+ +V+P TYLLR++N +F I +H +TVVE D + + TD L IT
Sbjct: 178 LT------WEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYIT 231
Query: 271 PGQTANVLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQL 330
Q VL+ TK F+ M D++ I PS+ +++ +
Sbjct: 232 VAQRYTVLVHTKN---------DTDKNFAIMQKFDDTMLDVI-----PSDLQLNATSYMV 277
Query: 331 YKPT--LPSINDTSFAVNFTRKF-----RSLASVKYPANVPQIVDRKFFFTVGLGSNPCP 383
Y T LP+ N NF F A P +V TV + +
Sbjct: 278 YNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHV---------ITVDVVMDNL- 327
Query: 384 KNTTCQGPNGTKFSASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTP 443
NG + A NN+++ P L M +G
Sbjct: 328 -------KNGVNY-AFFNNITYTAPKVPTL---------------------MTVLSSGDQ 358
Query: 444 PNNTNV-SNGTRTVLLPFNTSVELVM--QDTSILGAESHPLHLHXXXXXXXXXXXX---- 496
NN+ + + T T +L + VE+V+ QDT +HP HLH
Sbjct: 359 ANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-----THPFHLHGHAFQTIQRDRTYDDA 413
Query: 497 ------XYDPDKDLMNFNLVDPMERNTIGVPAGGWVAIRFFADNPGVWFMHCHLDVH 547
+DPD PM R+T+ V IRF ADNPGVWF HCH++ H
Sbjct: 414 LGEVPHSFDPDNHPAFPEY--PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 216/531 (40%), Gaps = 83/531 (15%)
Query: 37 TFNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV-----TIHWH 91
T + NV+ TR I VNG GP + + D + V N + N +IHWH
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 92 GVRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHI-SWLRSTLYGPIII 150
G+ Q + WADG V QCPI G ++ Y FT G GT +H+H + L GP++I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 151 LPKRN-ESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLY 209
+ + + + + I +W++ I + ++Q A P DA ING G
Sbjct: 127 YDDNDPHAALYDEDDENTIITLADWYH-----IPAPSIQGAAQP---DATLING-KGRYV 177
Query: 210 NCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLI 269
+ + + V+ GK Y +RLI+ + + FSI H LT++E D +P D+L I
Sbjct: 178 GGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQI 237
Query: 270 TPGQTANVLLRTKPYFPNATFFMQARPY--FSGM-GTIDNSTTAGILEYKHPSNHSISSK 326
GQ + +L P ++++A+P +G+ GT N + IL Y +N ++
Sbjct: 238 FTGQRYSFVLDANQ--PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS 295
Query: 327 KLQLYKPTLPSINDTSFAVNFTRKFRSLASVKYPANVPQIVDRKFFFTVGLGSNPCPKNT 386
P +N+ A+ P P D F +G
Sbjct: 296 A----NPNPAQLNEADL-----HALIDPAAPGIP--TPGAADVNLRFQLGF--------- 335
Query: 387 TCQGPNGTKFSASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNN 446
+G +F ++N ++ PS L G +
Sbjct: 336 -----SGGRF--TINGTAYESPSVPTLLQIMSGAQSA----------------------- 365
Query: 447 TNVSNGTRTVLLPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMN 506
++ LP N VELV+ +LG HP HLH
Sbjct: 366 NDLLPAGSVYELPRNQVVELVVP-AGVLGG-PHPFHLHGHAFSVVRSAGSS--------T 415
Query: 507 FNLVDPMERNTIGVPA-GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
+N V+P++R+ + + G V IRF DNPG WF HCH++ H GL + +
Sbjct: 416 YNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 216/531 (40%), Gaps = 83/531 (15%)
Query: 37 TFNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV-----TIHWH 91
T + NV+ TR I VNG GP + + D + V N + N +IHWH
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 92 GVRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHI-SWLRSTLYGPIII 150
G+ Q + WADG V QCPI G ++ Y FT G GT +H+H + L GP++I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 151 LPKRN-ESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLY 209
+ + + + + I +W++ I + ++Q A P DA ING G
Sbjct: 127 YDDNDPHAALYDEDDENTIITLADWYH-----IPAPSIQGAAQP---DATLING-KGRYV 177
Query: 210 NCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLI 269
+ + + V+ GK Y +RLI+ + + FSI H LT++E D +P D+L I
Sbjct: 178 GGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQI 237
Query: 270 TPGQTANVLLRTKPYFPNATFFMQARPY--FSGM-GTIDNSTTAGILEYKHPSNHSISSK 326
GQ + +L P ++++A+P +G+ GT N + IL Y +N ++
Sbjct: 238 FTGQRYSFVLDANQ--PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS 295
Query: 327 KLQLYKPTLPSINDTSFAVNFTRKFRSLASVKYPANVPQIVDRKFFFTVGLGSNPCPKNT 386
P +N+ A+ P P D F +G
Sbjct: 296 A----NPNPAQLNEADL-----HALIDPAAPGIP--TPGAADVNLRFQLGF--------- 335
Query: 387 TCQGPNGTKFSASVNNVSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNN 446
+G +F ++N ++ PS L G +
Sbjct: 336 -----SGGRF--TINGTAYESPSVPTLLQIMSGAQSA----------------------- 365
Query: 447 TNVSNGTRTVLLPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMN 506
++ LP N VELV+ +LG HP HLH
Sbjct: 366 NDLLPAGSVYELPRNQVVELVVP-AGVLGG-PHPFHLHGHAFSVVRSAGSS--------T 415
Query: 507 FNLVDPMERNTIGVPA-GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
+N V+P++R+ + + G V IRF DNPG WF HCH++ H GL + +
Sbjct: 416 YNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 22/300 (7%)
Query: 31 GITRHYTFNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVT-IH 89
G+TR Y +++ +T +TR+ ++ NG PGP+++A GD ++I VTN++ +N T IH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 90 WHGVRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHISW-LRSTLYGPI 148
WHG+RQ+ S DG VTQCPI G + TY F +T Q GT +H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 149 IILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPL 208
II Y +++ ++F + + + I + GA P + + +NG
Sbjct: 184 IINGPATADY-----DEDVGVIFLQDWAHESVFEIWDTARLGAPPALENTL-MNGTN--T 235
Query: 209 YNCSSK---------DTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYV 259
++CS+ ++L G Y LRLIN ++ F+I NHTLTV+ D V +
Sbjct: 236 FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPI 295
Query: 260 KPFDTDKLLITPGQTANVLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPS 319
P+ TD LLI GQ +V++ N ++++ + + + GIL Y S
Sbjct: 296 VPYTTDTLLIGIGQRYDVIVEANAAADN--YWIRGNWGTTCSTNNEAANATGILRYDSSS 353
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 464 VELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAG 523
V V++D + G HP+HLH ++ D+ FNLV+P R+ +P
Sbjct: 449 VVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 524 GWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWI 557
G++AI F DNPG W +HCH+ H S G+ M ++
Sbjct: 508 GYLAIAFKLDNPGSWLLHCHIAWHASEGMAMQFV 541
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 22/300 (7%)
Query: 31 GITRHYTFNIKYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVT-IH 89
G+TR Y +++ +T +TR+ ++ NG PGP+++A GD ++I VTN++ +N T IH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 90 WHGVRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHISW-LRSTLYGPI 148
WHG+RQ+ S DG VTQCPI G + TY F +T Q GT +H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 149 IILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPL 208
II Y +++ ++F + + + I + GA P + + +NG
Sbjct: 184 IINGPATADY-----DEDVGVIFLQDWAHESVFEIWDTARLGAPPALENTL-MNGTN--T 235
Query: 209 YNCSSK---------DTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYV 259
++CS+ ++L G Y LRLIN ++ F+I NHTLTV+ D V +
Sbjct: 236 FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPI 295
Query: 260 KPFDTDKLLITPGQTANVLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPS 319
P+ TD LLI GQ +V++ N ++++ + + + GIL Y S
Sbjct: 296 VPYTTDTLLIGIGQRYDVIVEANAAADN--YWIRGNWGTTCSTNNEAANATGILRYDSSS 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 464 VELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAG 523
V V++D + G HP+HLH ++ D+ FNLV+P R+ +P
Sbjct: 449 VVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 524 GWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWI 557
G++AI F DNPG W +HCH+ H S GL M ++
Sbjct: 508 GYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFV 541
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 205/515 (39%), Gaps = 78/515 (15%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNN-----VTIHWHGVRQVTSGWADGPA 105
R+ ++ G P + DR I V + +++ +IHWHG Q + DGPA
Sbjct: 42 ARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 101
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHIS-WLRSTLYGPIIIL-PKRNESYPFQKP 163
+V QCPI +S+ Y+F + GQ GT +H+H+S L G ++ P +
Sbjct: 102 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVD 161
Query: 164 HKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKP 223
I +W++ + + D INGL N S+ + V+
Sbjct: 162 DASTVITIADWYHSLSTVLFPNPNKAPP---APDTTLINGLGRNSANPSAGQLAVVSVQS 218
Query: 224 GKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKP 283
GK Y R+++ + FSI H +TV+E D V +P D L I GQ +V++
Sbjct: 219 GKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ 278
Query: 284 YFPNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKLQLYKPTLPSINDTSF 343
N ++++A P +G + I Y+ + + +PT + ++
Sbjct: 279 AVGN--YWIRANPS-NGRNGFTGGINSAIFRYQGAA----------VAEPT--TSQNSGT 323
Query: 344 AVNFTRKFRSLASVKYPAN-VPQIVDRKFFFTVGLGSNPCPKNTTCQGPNGTKFSASVNN 402
A+N L + P N VP D +G N T ++N
Sbjct: 324 ALN-EANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTING 368
Query: 403 VSFVLPSTAILQSYFFGQNNGVYTTDFPVKPPMPFNYTGTPPNNTNVSNGTRTVLLPFNT 462
F+ P+ +L G N PN ++ G + LP N
Sbjct: 369 APFIPPTVPVLLQILSGVTN---------------------PN--DLLPGGAVISLPANQ 405
Query: 463 SVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPA 522
+E+ SI G +HP HLH P + N+ V+P+ R+ + +
Sbjct: 406 VIEI-----SIPGGGNHPFHLHGHNFDVVRT------PGSSVYNY--VNPVRRDVVSIGG 452
Query: 523 GGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
GG V RF DNPG WF+HCH+D H GL + +
Sbjct: 453 GGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVF 487
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 30/280 (10%)
Query: 50 HTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN-----NVTIHWHGVRQVTSGWADGP 104
H+R+ + VNG PGP + +GD+ + V N+++N + ++HWHG Q + WADGP
Sbjct: 20 HSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGP 79
Query: 105 AYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHISWLRSTLY-----GPIIIL-PKRNESY 158
A+V QCPI G S+ Y+F+ Q GT +H+H+ ST Y GP ++ P +
Sbjct: 80 AFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHL----STQYCDGDRGPFVVYDPNDPSAN 135
Query: 159 PFQKPHKEIPILFGEWFNVDPEAIISQALQTG-AGPNVSDAYTINGLP-GPLYNCSSKDT 216
+ + I +W++ A Q G A P +DA ING GP + S D
Sbjct: 136 LYDVDNLNTVITLTDWYHT--------AAQNGPAKPGGADATLINGQGRGP--SSPSADL 185
Query: 217 YKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTAN 276
+ V GK Y RL++ + + FSI H +T+++ D++ V+P K+ I Q +
Sbjct: 186 AVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYS 245
Query: 277 VLLRTKPYFPNATFFMQARPYFSGMGTIDNSTTAGILEYK 316
+L N ++++A P +G N + IL Y
Sbjct: 246 FILNANQAVNN--YWIRANPNQGNVG-FTNGINSAILRYS 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 458 LPFNTSVELVMQDTSILGAESHPLHLHXXXXXXXXXXXXXYDPDKDLMNFNLVDPMERNT 517
LP + ++E+ TS HP HLH +N DP+ R+T
Sbjct: 374 LPSDANIEISFPATSAAAGGPHPFHLHGHAFAVVRSAGS--------TTYNYNDPIFRDT 425
Query: 518 I--GVPAGGW-VAIRFFADNPGVWFMHCHLDVHTSWGLRMAW 556
+ G PA V IRF +NPG WF+HCH+D H G + +
Sbjct: 426 VSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 31 GITRHYTFNI----KYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNH-VSNN 85
G+T+ Y FN+ + + + ++ +NG GP++VA GD V + V N+ V+N
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEK-VMLINGNIMGPNIVANWGDTVEVTVINNLVTNG 89
Query: 86 VTIHWHGVRQVTSGWADGPAYVTQCPIQ-TGQSYTYNFTITGQRGTLLWHAHIS-WLRST 143
+IHWHG+ Q + DG VT+CPI G TY + Q GT +H+H S +
Sbjct: 90 TSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNG 148
Query: 144 LYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTING 203
+ G I I S P+ PI + D +Q P SD ING
Sbjct: 149 VVGTIQI--NGPASLPYDIDLGVFPITDYYYRAADDLVHFTQ----NNAPPFSDNVLING 202
Query: 204 LP-GPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPF 262
P N + + PGK + LR++N + + S+ NHT+TV+ AD V V
Sbjct: 203 TAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAM 260
Query: 263 DTDKLLITPGQTANVLLRTKP----YFPNATFFMQA 294
D L + GQ +V++ Y+ N TF QA
Sbjct: 261 TVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQA 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 479 HPLHLHXXXXX---------XXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAGGWVAIR 529
HP+HLH +DP DL N +P R+T +PAGGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 530 FFADNPGVWFMHCHLDVHTSWGLRMAWI 557
F DNPG W HCH+ H S GL + ++
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 31 GITRHYTFNI----KYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNH-VSNN 85
G+T+ Y FN+ + + + ++ +NG GP++VA GD V + V N+ V+N
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEK-VMLINGNIMGPNIVANWGDTVEVTVINNLVTNG 89
Query: 86 VTIHWHGVRQVTSGWADGPAYVTQCPIQ-TGQSYTYNFTITGQRGTLLWHAHIS-WLRST 143
+IHWHG+ Q + DG VT+CPI G TY + Q GT +H+H S +
Sbjct: 90 TSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNG 148
Query: 144 LYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTING 203
+ G I I S P+ PI + D +Q P SD ING
Sbjct: 149 VVGTIQI--NGPASLPYDIDLGVFPITDYYYRAADDLVHFTQ----NNAPPFSDNVLING 202
Query: 204 LP-GPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPF 262
P N + + PGK + LR++N + + S+ NHT+TV+ AD V V
Sbjct: 203 TAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAM 260
Query: 263 DTDKLLITPGQTANVLLRTKP----YFPNATFFMQA 294
D L + GQ +V++ Y+ N TF QA
Sbjct: 261 TVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQA 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 479 HPLHLHXXXXX---------XXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAGGWVAIR 529
HP+HLH +DP DL N +P R+T +PAGGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 530 FFADNPGVWFMHCHLDVHTSWGLRMAWI 557
F DNPG W HCH+ H S GL + ++
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 31 GITRHYTFNI----KYHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNH-VSNN 85
G+T+ Y FN+ + + + ++ +NG GP++VA GD V + V N+ V+N
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEK-VMLINGNIMGPNIVANWGDTVEVTVINNLVTNG 89
Query: 86 VTIHWHGVRQVTSGWADGPAYVTQCPIQ-TGQSYTYNFTITGQRGTLLWHAHIS-WLRST 143
+IHWHG+ Q + DG VT+CPI G TY + Q GT +H+H S +
Sbjct: 90 TSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNG 148
Query: 144 LYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTING 203
+ G I I S P+ PI + D +Q P SD ING
Sbjct: 149 VVGTIQI--NGPASLPYDIDLGVFPITDYYYRAADDLVHFTQ----NNAPPFSDNVLING 202
Query: 204 LP-GPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYVKPF 262
P N + + PGK + LR++N + + S+ NHT+TV+ AD V V
Sbjct: 203 TAVNP--NTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAM 260
Query: 263 DTDKLLITPGQTANVLLRTKP----YFPNATFFMQA 294
D L + GQ +V++ Y+ N TF QA
Sbjct: 261 TVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQA 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 479 HPLHLHXXXXX---------XXXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAGGWVAIR 529
HP+HLH +DP DL N +P R+T +PAGGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 530 FFADNPGVWFMHCHLDVHTSWGLRMAWI 557
F DNPG W HCH+ H S GL + ++
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 19/269 (7%)
Query: 54 IISVNGQFPGPSLVAREGDRVLIKVTNHV-SNNVTIHWHGVRQVTSGWADGPAYVTQCPI 112
++ VN + GP++ A GD + + V N++ +N ++HWHG+RQ+ + + DG VT+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
Query: 113 Q-TGQSYTYNFTITGQRGTLLWHAHISWLRSTLYGPIIILPKRNE---SYPFQKPHKEIP 168
G TY F T Q GT +H+H S YG ++ + + S P+ P
Sbjct: 158 PPKGGRKTYKFRAT-QYGTSWYHSHFS----AQYGNGVVGTIQIDGPASLPYDIDLGVFP 212
Query: 169 ILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
++ +++ + ++ GA P SD NG + Y + + PGK +
Sbjct: 213 LM--DYYYRSADELVHFTQSNGAPP--SDNVLFNGT-ARHPETGAGQWYNVTLTPGKRHR 267
Query: 229 LRLINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKPYFPNA 288
LR+IN + ++ S+ H +TV+ D V V F L + GQ +V + N
Sbjct: 268 LRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNY 327
Query: 289 TFFMQARPYFSGM-GTIDNSTTAGILEYK 316
F + + G+ G+ +N A I Y+
Sbjct: 328 WFNVT---FGDGLCGSSNNKFPAAIFRYQ 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 479 HPLHLHXXXXXX---------XXXXXXXYDPDKDLMNFNLVDPMERNTIGVPAGGWVAIR 529
HP+HLH +DP KDL +P+ R+ +PAGGW+ +
Sbjct: 472 HPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLA 531
Query: 530 FFADNPGVWFMHCHLDVHTSWGLRMAWI 557
F DNPG W HCH+ H S GL + ++
Sbjct: 532 FKTDNPGAWLFHCHIAWHVSGGLSVDFL 559
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 56 SVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTG 115
+ NGQ P P + EGD V + VTN + TIHWHG+ Q + +DG + TQ I+ G
Sbjct: 26 AFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPG 85
Query: 116 QSYTYNFTITGQRGTLLWHAHISWLRST----LYGPIIILPKRNESYPFQKP-HKEIPIL 170
++TY F GT+ +H H++ ++GP+I+ PK P +K K+ ++
Sbjct: 86 DTFTYKFKAE-PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKN--PLPIEKTVTKDYILM 142
Query: 171 FGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLR 230
+W + + ++ + G +V D YTIN P +T ++VK G LR
Sbjct: 143 LSDWVS----SWANKPGEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLR 191
Query: 231 LINAALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLL 279
LI A + + + + + KP D +LI PG+ +V+L
Sbjct: 192 LIGAGDHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVIL 240
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 507 FNLVDPMERNTIGVPAGGWVAIRFFADNPGVWFMHCHLDVHTSWG 551
F L P++ +T+ + G + DNPG+W +H H+D HT+ G
Sbjct: 217 FPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNG 261
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 53 NIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPI 112
+++ G FPGP+L R D V + + N + +HWHG+ S D P I
Sbjct: 36 TLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL--PISPKVDDPF----LEI 89
Query: 113 QTGQSYTYNFTITGQ-RGTLLWHAHIS-----WLRSTLYGPIIILPKRNESYPFQKPHKE 166
G+S+TY FT+ + GT +H H+ L + L G +++ + ++ +
Sbjct: 90 PPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEH 149
Query: 167 IPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGP--LYNCSSKDTYKLKVKPG 224
+ +L ALQ G + +NG G L N + + T V
Sbjct: 150 LLVL------------KDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALRPTL---VAQK 194
Query: 225 KTYLLRLINAALNDELFFSIANHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRTKP 283
T LRL+NA+ ++ +H L ++ AD ++ +P + +LL+ PG+ A VL+R +
Sbjct: 195 ATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLR- 253
Query: 284 YFPNATFFMQARPY 297
F +QA PY
Sbjct: 254 --KEGRFLLQALPY 265
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 56 SVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTG 115
S NG+ PGP+L AREGD + I TN ++ TIH+HGV + T DG + I G
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRAT---MDGTPGIGAGSIAPG 114
Query: 116 QSYTYNFTITGQRGTLLWHAHIS----WLRSTLYGPIIILPKRNESYPFQKPHKEIPILF 171
QS+TY F T GT L+H H S + LYG I+ PK + P + ++
Sbjct: 115 QSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----RPPADDEMVMV 168
Query: 172 GEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRL 231
+N D G + ++ Y++NGLP + + +KVK + + L
Sbjct: 169 MNGYNTD-------------GGDDNEFYSVNGLPFHFMD------FPVKVKQHELVRIHL 209
Query: 232 INAALNDEL-FFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKPYFPNATF 290
IN D + F I + + TD + GQ + LR PY P
Sbjct: 210 INVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRF-PY-PGKFM 267
Query: 291 FMQARPYFSGMG 302
F + F+ +G
Sbjct: 268 FHAHKTEFAELG 279
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 38/233 (16%)
Query: 64 PSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADG--PAYVTQCPIQTGQSYTYN 121
P+++ R G RV + + N ++ +HWHG W + P++ I G+SY Y+
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWHNDAHPSFA----ITPGESYNYS 90
Query: 122 FTITGQRGTLLWHAHISWLRSTLYG----PIIILPKRNESYPFQKPHKEIPILFGEWFNV 177
F + + GT L+H H L + + ++I+ F+ ++P+
Sbjct: 91 FDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPL-------- 142
Query: 178 DPEAIISQALQTGAGP--NVSDAYTINGLPG--PLYNCSSKDTYKLKVKPGKTYLLRLIN 233
+IS G P N + I G G L N +KL G +Y LRL+N
Sbjct: 143 ----VISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKDAVFKLS---GGSYRLRLVN 195
Query: 234 AALNDELFFSIANHTLTVVEADAVYV------KPFDTDKLLITPGQTANVLLR 280
+ SI VV + V +P + L + P + A V++
Sbjct: 196 GSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVE 248
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 100/253 (39%), Gaps = 29/253 (11%)
Query: 35 HYTFNIKYHNVTRLCHTRNII-SVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGV 93
H T IK +++ + + + + NG P P + EGD++ I V N + TIHWHGV
Sbjct: 52 HATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGV 111
Query: 94 RQVTSGWADGPAYVTQCPIQTGQSYTYNFTI-TGQRGTLLWHAHISWLRST-----LYGP 147
DG + PI G+ Y F I GT +H H + S L G
Sbjct: 112 --PVPPDQDGSPH---DPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGA 166
Query: 148 IIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLPGP 207
+I K++ KE ++ + +D A I PN + +NG G
Sbjct: 167 FVIKAKKDALSHL----KEKDLMISD-LRLDENAQI---------PNNNLNDWLNGREGE 212
Query: 208 LYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLTVVEADAVYV-KPFDTDK 266
+ + +K K+K +R+ NA L I +V D + K ++
Sbjct: 213 FVLINGQ--FKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEE 270
Query: 267 LLITPGQTANVLL 279
L ++P VL+
Sbjct: 271 LFLSPASRVEVLI 283
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWHA----HISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++HA + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHAAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + ++ +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S L G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S L G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + ++ +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 51 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 105
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S L G +++LP+ P KP
Sbjct: 106 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPQGKP 162
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 163 LHYDRAYTIGEF 174
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + ++ +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans
Nitrite Reductase
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + +++HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2UXT|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXT|B Chain B, Sufi Protein From Escherichia Coli
pdb|2UXV|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXV|B Chain B, Sufi Protein From Escherichia Coli
Length = 451
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 53/272 (19%)
Query: 53 NIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPI 112
++ +NG++ GP++ +GD V + +N ++ NV++ G+ QV GPA + +
Sbjct: 39 SVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGL-QVPGPLMGGPARM----M 93
Query: 113 QTGQSYTYNFTITGQRGTLLWHAHI-----SWLRSTLYGPIIILPKRNESYPFQKPHKEI 167
+ I TL +HA+ + + L G ++ + ++S P I
Sbjct: 94 SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLP-------I 146
Query: 168 PILFGEWFNVDPEAIISQAL-----------QTGAGPNVSDAYTINGLPGP--------- 207
P +G VD +I Q + G+G V D +NG+ P
Sbjct: 147 PNHYG----VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWV 202
Query: 208 ---LYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFF----SIANHTLTVVEADAVYVK 260
L N S+ Y+L++ G R ++ D+ F S+ +L E + V
Sbjct: 203 RLRLLNASNSRRYQLQMNDG-----RPLHVISGDQGFLPAPVSVKQLSLAPGERREILVD 257
Query: 261 PFDTDKLLITPGQTANVLLRTKPYFPNATFFM 292
+ D++ IT G+ A+++ R + +F ++ +
Sbjct: 258 MSNGDEVSITCGEAASIVDRIRGFFEPSSILV 289
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 53 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 107
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 108 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 164
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 165 LHYDRAYTIGEF 176
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3 -
1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase In
Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 58 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 112
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P KP
Sbjct: 113 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 169
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 170 LHYDRAYTIGEF 181
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S + G +++LP+ P P
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPSGMVPWHVVSGMSGTLMVLPRDGLKDPAGAP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGASGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWH----AHISW-LRSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + W + S G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 106
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWHAHISWL-----RSTLYGPIIILPKRNESYPFQKP 163
+ G+ T F + GT ++H + S + G +++LP+ P KP
Sbjct: 107 N--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPHHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 164 -HKEIPILFGEW 174
H + GE+
Sbjct: 164 LHYDRAYTIGEF 175
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWA---DGPA 105
T ++ NG PGP+LV EGD V + + N +N + + +HG G P
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGGAKLTNVNPG 111
Query: 106 YVTQCPIQTGQSYTYNFTITGQRGTLLWHAHISWLRSTLYGPIIILPKRNESYPFQKP-H 164
+ +S T+ + + G + WH + S + G +++LP+ P KP H
Sbjct: 112 EQATLRFKADRSGTFVY-VCAPEGMVPWH-----VVSGMSGTLMVLPRDGLKDPQGKPLH 165
Query: 165 KEIPILFGEW 174
+ GE+
Sbjct: 166 YDRAYTIGEF 175
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 103/274 (37%), Gaps = 32/274 (11%)
Query: 62 PGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVTQCPIQTGQSYT 119
PG + REGD + ++NH S+ + I H V +G G P G + T
Sbjct: 58 PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAV----TGPGGGAESSFTAP---GHTST 110
Query: 120 YNFTITGQRGTLLWHAHIS----WLRSTLYGPIIILPKRNESYPFQKPHKEIPILFGEWF 175
+NF G ++H + + + +YG I++ PK +E ++ G+++
Sbjct: 111 FNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKEG----LAPVDREYYLVQGDFY 165
Query: 176 NVDP--EAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLIN 233
EA + A +D NG G S+ D L K G+T L + N
Sbjct: 166 TKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVG-----STTDENSLTAKVGETVRLYIGN 220
Query: 234 AALNDELFFSIANHTLTVVEADAVYVKPFDTDKLLITPGQTANVLLRTKPYFPNATFFMQ 293
N F + V + +K + LI G A ++ K P TF +
Sbjct: 221 GGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAA--IVEFKVEVP-GTFILV 277
Query: 294 ARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKK 327
F N +L+ + P +HSI + K
Sbjct: 278 DHSIFRAF----NKGALAMLKVEGPDDHSIFTGK 307
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNV--TIHWHGVRQVTSGWADGPAYVT 108
T ++ NG PGP+LV EGD V + + N +N + + +HG G A +T
Sbjct: 53 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGG-----AKLT 107
Query: 109 QCPIQTGQSYTYNFTITGQRGTLLWHAHISWLRSTLYGPIIILPKRNESYPFQKP-HKEI 167
+ G+ T F + GT ++H S G +++LP+ P KP H +
Sbjct: 108 N--VNPGEQATLRFK-ADRSGTFVYHCTPHPFMS---GTLMVLPRDGLKDPQGKPLHYDR 161
Query: 168 PILFGEW 174
GE+
Sbjct: 162 AYTIGEF 168
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 62 PGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTG--QSYT 119
PGP + EGD + I+ TN + ++H HG+ S +DG A + + ++ G ++YT
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDAEIS--SDGTA-MNKSDVEPGGTRTYT 93
Query: 120 YNFTITGQRGTLLW----------HAHI-------SWLRSTLYGPIIILPK 153
+ G+R W H H+ +R+ LYGP+I+ K
Sbjct: 94 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 144
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 53 NIISVNGQFP--GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQC 110
N +++N + P GP A GDRV I + H T H HG R WAD +
Sbjct: 158 NDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTG 212
Query: 111 PIQ---------TGQSYTYNFTITGQR----GTLLWHAHISWLRSTLYGPIIILPKRNES 157
P TG + ++ F I G ++H H+ + ++ K + +
Sbjct: 213 PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 272
Query: 158 YPFQKP 163
P +P
Sbjct: 273 IPGYEP 278
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 536 GVWFMHCHLDVHTSWGLRMAWIVQNGAQPNQTLP 569
G W HCH+ H+ G+ ++V+ +P+ T+P
Sbjct: 244 GAWMYHCHVQSHSDMGMVGLFLVK---KPDGTIP 274
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 62 PGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQSYTYN 121
PGP + EGD + I+ TN + ++H HG+ S +DG A + + ++ G + TY
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYT 131
Query: 122 FTIT--GQRGTLLW----------HAHI-------SWLRSTLYGPIIILPK 153
+ G+R W H H+ +R+ LYGP+I+ K
Sbjct: 132 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 182
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 53 NIISVNGQFP--GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQC 110
N +++N + P GP A GDRV I + H T H HG R WAD +
Sbjct: 196 NDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTG 250
Query: 111 PIQ---------TGQSYTYNFTITGQR----GTLLWHAHISWLRSTLYGPIIILPKRNES 157
P TG + ++ F I G ++H H+ + ++ K + +
Sbjct: 251 PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310
Query: 158 YPFQKPHK 165
P +PH+
Sbjct: 311 IPGYEPHE 318
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 536 GVWFMHCHLDVHTSWGLRMAWIVQNGAQPNQTLP 569
G W HCH+ H+ G+ ++V+ +P+ T+P
Sbjct: 282 GAWMYHCHVQSHSDMGMVGLFLVK---KPDGTIP 312
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 62 PGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTG--QSYT 119
PGP + EGD + I+ TN + ++H HG+ S +DG A + + ++ G ++YT
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYT 90
Query: 120 YNFTITGQRGTLLW----------HAHI-------SWLRSTLYGPIIILPKRN 155
+ G+R W H H+ +R+ LYGP+I+ K +
Sbjct: 91 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD 143
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 20/127 (15%)
Query: 53 NIISVNGQFP--GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQC 110
N +++N + P GP A GDRV I + H T H HG R WAD +
Sbjct: 155 NDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTG 209
Query: 111 PIQ---------TGQSYTYNFTITGQR----GTLLWHAHISWLRSTLYGPIIILPKRNES 157
P TG + ++ F I G ++H H+ + ++ K + +
Sbjct: 210 PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269
Query: 158 YPFQKPH 164
P +PH
Sbjct: 270 IPGYEPH 276
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 536 GVWFMHCHLDVHTSWGLRMAWIVQNGAQPNQTLP 569
G W HCH+ H+ G+ ++V+ +P+ T+P
Sbjct: 241 GAWMYHCHVQSHSDMGMVGLFLVK---KPDGTIP 271
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 62 PGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTG--QSYT 119
PGP + EGD + I+ TN + ++H HG+ S +DG A + + ++ G ++YT
Sbjct: 38 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDFEIS--SDGTA-MNKSDVEPGGTRTYT 94
Query: 120 YNFTITGQRGTLLW----------HAHI-------SWLRSTLYGPIIILPK 153
+ G+R W H H+ +R+ LYGP+I+ K
Sbjct: 95 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 145
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 53 NIISVNGQFP--GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQC 110
N +++N + P GP A GDRV I + H T H HG R WAD +
Sbjct: 159 NDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTG 213
Query: 111 PIQ---------TGQSYTYNFTITGQR----GTLLWHAHISWLRSTLYGPIIILPKRNES 157
P TG + ++ F I G ++H H+ + ++ K + +
Sbjct: 214 PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 273
Query: 158 YPFQKP 163
P +P
Sbjct: 274 IPGYEP 279
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 536 GVWFMHCHLDVHTSWGLRMAWIVQNGAQPNQTLP 569
G W HCH+ H+ G+ ++V+ +P+ T+P
Sbjct: 245 GAWMYHCHVQSHSDMGMVGLFLVK---KPDGTIP 275
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 39/183 (21%)
Query: 61 FPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAY--------VTQCPI 112
F GP + A GD+V + + N S T H HG+ +G Y +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKE--HEGAIYPDNTTDFQRADDKV 130
Query: 113 QTGQSYTYNFTITGQRG---------TLLWHAHISW---LRSTLYGPIIILPKRNESYPF 160
G+ YTY T ++ T ++H+HI + S L GP+II K +
Sbjct: 131 YPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEK 190
Query: 161 QKP-HKEIPILFG------EWFNVD--------PEAI--ISQALQTGAGPNVSDAYTING 203
+K +E ++F W+ D PE + ++ Q + YT
Sbjct: 191 EKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQESNRMYSVNGYTFGS 250
Query: 204 LPG 206
LPG
Sbjct: 251 LPG 253
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 523 GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWIV 558
G + + F PG+W +HCH+ H G+ + V
Sbjct: 1002 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 1037
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 63 GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQSYTYNF 122
GP L A GD+V I N + +IH HGV+ +S T P G++ TY +
Sbjct: 790 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS---------TVTPTLPGETLTYVW 840
Query: 123 TITGQRGTLLWH-AHISW-----------LRSTLYGPIIILPK 153
I + G A I W L S L GP+I+ +
Sbjct: 841 KIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRR 883
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles
Of Various Metal Cation Binding Sites
Length = 1065
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 23/132 (17%)
Query: 61 FPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAY--------VTQCPI 112
F GP + A GD+V + + N S T H HG+ +G Y +
Sbjct: 92 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKE--HEGAIYPDNTTDFQRADDKV 149
Query: 113 QTGQSYTYNFTITGQRG---------TLLWHAHISW---LRSTLYGPIIILPKRNESYPF 160
G+ YTY T ++ T ++H+HI + S L GP+II K +
Sbjct: 150 YPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEK 209
Query: 161 QKP-HKEIPILF 171
+K +E ++F
Sbjct: 210 EKHIDREFVVMF 221
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 523 GGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWIV 558
G + + F PG+W +HCH+ H G+ + V
Sbjct: 1021 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 1056
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 63 GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQSYTYNF 122
GP L A GD+V I N + +IH HGV+ +S T P G++ TY +
Sbjct: 809 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS---------TVTPTLPGETLTYVW 859
Query: 123 TITGQRGTLLWH-AHISW-----------LRSTLYGPIIILPK 153
I + G A I W L S L GP+I+ +
Sbjct: 860 KIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRR 902
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTGQS 117
NG GP++ + G V + + N ++ T+HWHG+ +V GP + P +S
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI--IPPGGKRS 98
Query: 118 YTYNFTITGQRGTLLW---HAHISWLRSTLYGPI-IILPKRNESYPFQKPHK----EIPI 169
T N Q W H H R G +++ + +E P + ++P+
Sbjct: 99 VTLNVD---QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPV 155
Query: 170 LFGE-WFNVDPEAIISQALQTGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYL 228
+ + F+ D + + T A D NG Y P
Sbjct: 156 IVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQHAAPRGWLR 204
Query: 229 LRLINAALNDELFFSIA-NHTLTVVEADAVYV-KPFDTDKLLITPGQTANVLLRT---KP 283
LRL+N L F+ + N L V+ +D + +P +L + G+ VL+ KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 Y----FPNATFFMQARPY 297
+ P + M P+
Sbjct: 265 FDLVTLPVSQMGMAIAPF 282
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWA----DGPAY 106
TR I GP L GD +LI N S I+ HG+ V ++ G +
Sbjct: 439 TREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKH 498
Query: 107 VTQCPIQTGQSYTYNFTITGQRG---------TLLWHAHISWLR---STLYGPIIILPKR 154
+ PI G+ + Y +T+T + G T + + ++ R S L GP++I K
Sbjct: 499 LKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKE 558
Query: 155 N 155
+
Sbjct: 559 S 559
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 51 TRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWA----DGPAY 106
TR I GP L GD +LI N S I+ HG+ V ++ G +
Sbjct: 438 TREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKH 497
Query: 107 VTQCPIQTGQSYTYNFTITGQRG---------TLLWHAHISWLR---STLYGPIIILPKR 154
+ PI G+ + Y +T+T + G T + + ++ R S L GP++I K
Sbjct: 498 LKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKE 557
Query: 155 N 155
+
Sbjct: 558 S 558
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 28/125 (22%)
Query: 61 FPGPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQCPIQTG--QSY 118
PGP + EGD + I+ N + V++H HG+ S +DG ++ ++ G ++Y
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTKQ-SRSDVEPGGTRTY 95
Query: 119 TYNFTITGQRGTLLW----------HAHI-------SWLRSTLYGPII------ILPKRN 155
T+ + G+R W H H+ +R+ LYGP+I +LP R
Sbjct: 96 TWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRT 155
Query: 156 ESYPF 160
+ F
Sbjct: 156 HTIVF 160
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 536 GVWFMHCHLDVHTSWGLRMAWIVQNGAQPNQTLP 569
G W HCH+ H+ G+ ++V+ +P+ T+P
Sbjct: 247 GAWMYHCHVQSHSDMGMVGLFLVK---KPDGTIP 277
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 63 GPSLVAREGDRVLIKVTNHVSNNVTIHWHGVRQVTSGWADGPAYVTQ-CPIQT------- 114
GP+L A GD + + N ++IH G++ S +++G +Y P++
Sbjct: 59 GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKY--SKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 115 GQSYTYNFTITGQRG---------TLLWHAHISWLR---STLYGPIIILPK 153
GQ YTY + I+ G T +++++++ + S L GP++I K
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UYY|B Chain B, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UZB|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UZB|B Chain B, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UZB|C Chain C, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UZB|D Chain D, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UZO|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
pdb|3UZO|B Chain B, Crystal Structures Of Branched-Chain Aminotransferase From
Deinococcus Radiodurans Complexes With
Alpha-Ketoisocaproate And L-Glutamate Suggest Its
Radio-Resistance For Catalysis
Length = 358
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 230 RLINAALNDELFFSIANHTLTVVEADAVYVKPFDTD-KLLITP---GQTANVLLRTKPYF 285
RL+ L+DE F + L VV A+ ++ P+ T L + P G N+ +RT P F
Sbjct: 107 RLLMPELSDEQFI---DACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEF 163
Query: 286 PNATFFMQARPYFSGMGTIDNSTTAGILEYKHPSNHSISSKKL 328
+ F + PYF G T N T+ +Y + H + K+
Sbjct: 164 IFSVFCVPVGPYFKGGLTPTNFITS---DYDRAAPHGTGAAKV 203
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498l Mutant
Length = 507
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 33/233 (14%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSEEPEV 96
Query: 85 NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-HAHIS 138
+H HG VT +DG A+ ++ QTG + Y++ QRG +LW H H
Sbjct: 97 KTVVHLHG--GVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYHDHAM 153
Query: 139 WLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGAGP 193
L + L G II + + ++P+L + + ++ + P
Sbjct: 154 ALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSP 213
Query: 194 NVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 SLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 265
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 98/252 (38%), Gaps = 41/252 (16%)
Query: 26 PEFAAGITRHY--TFNIKYHNVTRLCHTRNII-----SVNGQFPGPSLVAREGDRVLIKV 78
PE I R Y +K V + + + + +G PG + REGD V ++
Sbjct: 25 PEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEF 84
Query: 79 TNHVSNNV--TIHWHGVRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAH 136
+N+ S+ V + +H G++ T++F Q G ++H
Sbjct: 85 SNNPSSTVPHNVDFHAATGQGG-------GAAATFTAPGRTSTFSFKAL-QPGLYIYHCA 136
Query: 137 IS----WLRSTLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQ---- 188
++ + + +YG I++ PK E P K KE I+ G+++ + +Q LQ
Sbjct: 137 VAPVGMHIANGMYGLILVEPK--EGLP--KVDKEFYIVQGDFYTKGKKG--AQGLQPFDM 190
Query: 189 TGAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHT 248
A + NG G L ++ LK K G+T + + N N F +
Sbjct: 191 DKAVAEQPEYVVFNGHVGALTGDNA-----LKAKAGETVRMYVGNGGPNLVSSFHVIGEI 245
Query: 249 LTVVEADAVYVK 260
D VYV+
Sbjct: 246 F-----DKVYVE 252
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 115/299 (38%), Gaps = 36/299 (12%)
Query: 35 HYTFNIK--YHNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSNNVTIHWHG 92
+Y IK H V + +++ +G PGP+ G +++ N+ ++H HG
Sbjct: 38 YYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHG 97
Query: 93 --VRQVTSGWADGPAYVTQCPIQTGQSYTYNFTITGQRGTLLWHAHISWLRSTLYGPIII 150
R GWA+ + G Y + TL +H H + +
Sbjct: 98 SFSRAAFDGWAEDIT-------EPGSFKDYYYPNRQSARTLWYHDHAMHITAE------- 143
Query: 151 LPKRNES--YPFQKPHKE---IPILFGEWFNVDPEAIISQALQTGAGPNVSDAYTINGLP 205
R ++ Y P ++ +P +GE+ D I++ T G V+ +N
Sbjct: 144 NAYRGQAGLYMLTDPAEDALNLPSGYGEF---DIPMILTSKQYTANGNLVTTNGELNSFW 200
Query: 206 GPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDE--LFFSIANHTLT-----VVEADAVY 258
G + + + + V+P K Y R ++AA++ L+F+ + T V+ +D+
Sbjct: 201 GDVIHVNGQPWPFKNVEPRK-YRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGL 259
Query: 259 VK-PFDTDKLLITPGQTANVLLRTKPYFPNATFFMQARPYFSGMGT-IDNSTTAGILEY 315
++ P DT L I+ + V+ Y G+GT D T ++ +
Sbjct: 260 LEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRF 318
>pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498d Mutant
Length = 513
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT +DG A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site:e498t Mutant
Length = 513
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT +DG A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota
Length = 513
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT +DG A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of Cota-Laccase:
I494a Mutant
Length = 513
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT +DG A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein From
Bacillus Subtilis
pdb|1OF0|A Chain A, Crystal Structure Of Bacillus Subtilis Cota After 1h
Soaking With Ebs
pdb|1W6L|A Chain A, 3d Structure Of Cota Incubated With Cucl2
pdb|1W6W|A Chain A, 3d Structure Of Cota Incubated With Sodium Azide
pdb|1W8E|A Chain A, 3d Structure Of Cota Incubated With Hydrogen Peroxide
pdb|2BHF|A Chain A, 3d Structure Of The Reduced Form Of Cota
pdb|2X88|A Chain A, Crystal Structure Of Holocota
pdb|3ZDW|A Chain A, Substrate And Dioxygen Binding To The Endospore Coat
Laccase Cota From Bacillus Subtilis
Length = 513
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT +DG A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|B Chain B, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|C Chain C, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|A Chain A, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|B Chain B, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|C Chain C, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 330
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 27 EFAAGITRHYTFNIKYHNVTRLCH----TRNIISVNGQFPGPSLVAREGDRVLIKVTNHV 82
+ AAG + F + + T ++ NG PGP+LV EGD + + + N
Sbjct: 20 QVAAGAPKVVQFRMSIEEKKMVADDDGTTAQAMTFNGSVPGPTLVVHEGDYIELTLVNPA 79
Query: 83 SNNV 86
+N++
Sbjct: 80 TNSM 83
>pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116e Mutant
Length = 513
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT ++G A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSEGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116n Mutant
Length = 513
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADG--PAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-H 134
+H HG VT ++G A+ ++ QTG + Y++ QRG +LW H
Sbjct: 97 EPEVKTVVHLHG--GVTPDDSNGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYH 153
Query: 135 AHISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQT 189
H L + L G II + + ++P+L + + ++ +
Sbjct: 154 DHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPE 213
Query: 190 GAGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 214 NPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|3IBR|A Chain A, Crystal Structure Of P. Aeruginosa Bacteriophytochrome
Photosensory Core Module Mutant Q188l In The Mixed PrPFR
STATE
pdb|3IBR|B Chain B, Crystal Structure Of P. Aeruginosa Bacteriophytochrome
Photosensory Core Module Mutant Q188l In The Mixed PrPFR
STATE
Length = 505
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 499 DPDKDLMNF-NLVDPMERNTIGVPAGGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWI 557
DP++D+ + N P E + G G +AIRF G F H +VH R+ W
Sbjct: 384 DPERDIYHTDNWPQPSEDSPDGGDCCGVLAIRFHRQESGWIFWFRHEEVH-----RIRW- 437
Query: 558 VQNGAQPNQTLPPPPS 573
G +P + L PS
Sbjct: 438 ---GGKPEKLLTIGPS 450
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 534 NPGVWFMHCHLDVHTSWGLRMAWIVQN 560
PG+W HCH+ H+ G+ ++V+N
Sbjct: 261 GPGMWMYHCHVQNHSDMGMAGMFLVRN 287
>pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116a Mutant
Length = 513
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 86/235 (36%), Gaps = 33/235 (14%)
Query: 43 HNVTRLCHTRNIISVNGQFPGPSLVAREGDRVLIKVTNHVSN------------------ 84
H + R + NG FPGP++ + + V +K N++ +
Sbjct: 37 HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHE 96
Query: 85 ----NVTIHWHGVRQVTSGWADGPAYVTQCPIQTG---QSYTYNFTITGQRGTLLW-HAH 136
+H HG A+ ++ QTG + Y++ QRG +LW H H
Sbjct: 97 EPEVKTVVHLHGGVTPDDSAGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYHDH 155
Query: 137 ISWLR-----STLYGPIIILPKRNESYPFQKPHKEIPILFGEWFNVDPEAIISQALQTGA 191
L + L G II + + ++P+L + + ++ +
Sbjct: 156 AMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENP 215
Query: 192 GPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDELFFSIAN 246
P++ + + G + K L+V+P K Y R+INA+ S+ N
Sbjct: 216 SPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDN 269
>pdb|3C2W|A Chain A, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|B Chain B, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|C Chain C, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|D Chain D, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|E Chain E, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|F Chain F, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|G Chain G, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3C2W|H Chain H, Crystal Structure Of The Photosensory Core Domain Of P.
Aeruginosa Bacteriophytochrome Pabphp In The Pfr State
pdb|3NHQ|A Chain A, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|B Chain B, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|C Chain C, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|D Chain D, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|E Chain E, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|F Chain F, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|G Chain G, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NHQ|H Chain H, The Dark Pfr Structure Of The Photosensory Core Module Of
P. Aeruginosa Bacteriophytochrome
pdb|3NOP|C Chain C, Light-Induced Intermediate Structure L1 Of Pseudomonas
Aeruginosa Bacteriophytochrome
pdb|3NOT|C Chain C, Light-Induced Intermediate Structure L2 Of P. Aeruginosa
Bacteriophytochrome
pdb|3NOU|C Chain C, Light-Induced Intermediate Structure L3 Of P. Aeruginosa
Bacteriophytochrome
Length = 505
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 499 DPDKDLMNF-NLVDPMERNTIGVPAGGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWI 557
DP++D+ + N P E + G G +AIRF G F H +VH R+ W
Sbjct: 384 DPERDIYHTDNWPQPSEDSPDGGDCCGVLAIRFHRQESGWIFWFRHEEVH-----RIRW- 437
Query: 558 VQNGAQPNQTLPPPPS 573
G +P + L PS
Sbjct: 438 ---GGKPEKLLTIGPS 450
>pdb|3G6O|A Chain A, Crystal Structure Of P. Aeruginosa Bacteriophytochrome
Pabphp Photosensory Core Domain Mutant Q188l
pdb|3G6O|B Chain B, Crystal Structure Of P. Aeruginosa Bacteriophytochrome
Pabphp Photosensory Core Domain Mutant Q188l
Length = 505
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 499 DPDKDLMNF-NLVDPMERNTIGVPAGGWVAIRFFADNPGVWFMHCHLDVHTSWGLRMAWI 557
DP++D+ + N P E + G G +AIRF G F H +VH R+ W
Sbjct: 384 DPERDIYHTDNWPQPSEDSPDGGDCCGVLAIRFHRQESGWIFWFRHEEVH-----RIRW- 437
Query: 558 VQNGAQPNQTLPPPPS 573
G +P + L PS
Sbjct: 438 ---GGKPEKLLTIGPS 450
>pdb|3GYR|A Chain A, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|B Chain B, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|C Chain C, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|D Chain D, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|E Chain E, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|F Chain F, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|G Chain G, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|H Chain H, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|I Chain I, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|J Chain J, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|K Chain K, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|L Chain L, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center
Length = 612
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 58 NGQFPGPSLVAREGDRVLIKVTNHV 82
+GQ PGP++ R G RV I TN +
Sbjct: 59 DGQVPGPTIEVRRGQRVRIAWTNRI 83
>pdb|1HDS|A Chain A, Macromolecular Structure Refinement By Restrained Least-
Squares And Interactive Graphics As Applied To Sickling
Deer Type Iii Hemoglobin
pdb|1HDS|C Chain C, Macromolecular Structure Refinement By Restrained Least-
Squares And Interactive Graphics As Applied To Sickling
Deer Type Iii Hemoglobin
Length = 141
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 186 ALQTGAGPNVSDAYT-----INGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDEL 240
A Q G V++A T +N LPG L N S+ +KL+V P L L+ L
Sbjct: 53 AQQKAHGQKVANALTKAQGHLNDLPGTLSNLSNLHAHKLRVNPVNFKL-------LSHSL 105
Query: 241 FFSIANH 247
++A+H
Sbjct: 106 LVTLASH 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,562,992
Number of Sequences: 62578
Number of extensions: 810776
Number of successful extensions: 1794
Number of sequences better than 100.0: 107
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1527
Number of HSP's gapped (non-prelim): 213
length of query: 578
length of database: 14,973,337
effective HSP length: 104
effective length of query: 474
effective length of database: 8,465,225
effective search space: 4012516650
effective search space used: 4012516650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)