Query 008093
Match_columns 578
No_of_seqs 462 out of 3723
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 19:22:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008093.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008093hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 3.5E-68 7.6E-73 547.4 33.8 393 22-431 4-398 (409)
2 COG0429 Predicted hydrolase of 100.0 9.2E-54 2E-58 425.8 28.1 318 92-423 18-342 (345)
3 PLN02511 hydrolase 100.0 1.4E-50 3.1E-55 431.5 37.1 345 68-424 19-368 (388)
4 PRK10985 putative hydrolase; P 100.0 5.8E-45 1.2E-49 379.9 35.0 317 91-422 2-321 (324)
5 PLN02298 hydrolase, alpha/beta 99.9 3.2E-24 7E-29 224.1 22.7 278 117-423 29-319 (330)
6 PHA02857 monoglyceride lipase; 99.9 1.4E-23 3.1E-28 213.2 22.9 263 124-421 4-273 (276)
7 PLN02385 hydrolase; alpha/beta 99.9 1.1E-23 2.4E-28 222.0 21.5 252 158-422 85-346 (349)
8 COG2267 PldB Lysophospholipase 99.9 4.2E-22 9.1E-27 204.7 23.3 270 120-421 9-294 (298)
9 PRK10749 lysophospholipase L2; 99.9 4.9E-22 1.1E-26 207.8 20.9 287 103-420 18-328 (330)
10 TIGR02240 PHA_depoly_arom poly 99.9 6.1E-22 1.3E-26 201.5 19.5 247 159-430 24-275 (276)
11 PLN02652 hydrolase; alpha/beta 99.9 2.9E-21 6.4E-26 205.9 25.1 271 120-423 110-389 (395)
12 PRK00870 haloalkane dehalogena 99.9 6.7E-22 1.4E-26 203.9 19.3 270 115-420 14-300 (302)
13 PLN02824 hydrolase, alpha/beta 99.9 2.3E-21 5E-26 199.0 20.8 241 160-420 29-293 (294)
14 PRK03592 haloalkane dehalogena 99.9 2.1E-21 4.6E-26 199.3 20.5 246 160-422 27-290 (295)
15 KOG1455 Lysophospholipase [Lip 99.9 1.8E-21 3.8E-26 192.6 18.1 280 117-420 24-311 (313)
16 TIGR03343 biphenyl_bphD 2-hydr 99.9 6.8E-21 1.5E-25 193.5 17.8 239 160-419 30-281 (282)
17 TIGR01607 PST-A Plasmodium sub 99.9 6.6E-21 1.4E-25 199.4 17.6 272 125-419 2-331 (332)
18 TIGR01738 bioH putative pimelo 99.9 3.4E-21 7.3E-26 188.9 14.4 232 160-418 4-245 (245)
19 COG1647 Esterase/lipase [Gener 99.9 3.5E-21 7.5E-26 181.9 13.2 225 161-420 16-243 (243)
20 TIGR03611 RutD pyrimidine util 99.9 1.5E-20 3.2E-25 186.4 18.4 239 158-419 11-256 (257)
21 TIGR02427 protocat_pcaD 3-oxoa 99.9 7E-21 1.5E-25 187.1 15.8 238 159-419 12-251 (251)
22 PLN02679 hydrolase, alpha/beta 99.9 6.2E-20 1.4E-24 194.2 24.0 242 159-421 87-357 (360)
23 PRK13604 luxD acyl transferase 99.8 5.9E-20 1.3E-24 186.5 20.9 249 121-424 10-262 (307)
24 TIGR03056 bchO_mg_che_rel puta 99.8 5.7E-20 1.2E-24 185.5 20.8 246 159-419 27-278 (278)
25 TIGR03695 menH_SHCHC 2-succiny 99.8 1.6E-20 3.5E-25 183.9 14.8 239 161-419 2-251 (251)
26 PRK10349 carboxylesterase BioH 99.8 2.7E-20 6E-25 186.9 16.6 232 161-419 14-254 (256)
27 PLN02872 triacylglycerol lipas 99.8 2E-20 4.3E-25 199.0 16.4 307 101-422 26-390 (395)
28 TIGR01250 pro_imino_pep_2 prol 99.8 2E-19 4.3E-24 181.0 22.1 246 160-419 25-288 (288)
29 PRK10673 acyl-CoA esterase; Pr 99.8 4.6E-20 1E-24 184.4 17.3 234 158-420 14-254 (255)
30 PLN02965 Probable pheophorbida 99.8 2.5E-20 5.5E-25 187.4 15.4 240 162-421 5-253 (255)
31 PRK11126 2-succinyl-6-hydroxy- 99.8 3.6E-20 7.8E-25 183.9 16.0 231 160-420 2-241 (242)
32 PLN03087 BODYGUARD 1 domain co 99.8 1.2E-19 2.5E-24 196.6 20.9 252 158-420 199-478 (481)
33 PF12697 Abhydrolase_6: Alpha/ 99.8 4.8E-20 1E-24 177.9 15.8 218 163-401 1-220 (228)
34 PLN02578 hydrolase 99.8 7.3E-20 1.6E-24 193.3 18.5 243 160-419 86-353 (354)
35 KOG4178 Soluble epoxide hydrol 99.8 7.3E-20 1.6E-24 183.9 17.3 250 158-421 42-320 (322)
36 PRK06489 hypothetical protein; 99.8 2.5E-19 5.4E-24 189.6 22.1 252 160-422 69-358 (360)
37 PRK03204 haloalkane dehalogena 99.8 5.7E-19 1.2E-23 181.0 22.3 239 160-418 34-285 (286)
38 PRK07581 hypothetical protein; 99.8 2.4E-19 5.3E-24 188.0 19.8 254 159-422 40-337 (339)
39 TIGR01249 pro_imino_pep_1 prol 99.8 1.5E-18 3.2E-23 179.6 21.5 126 121-270 5-130 (306)
40 PLN02894 hydrolase, alpha/beta 99.8 7.5E-18 1.6E-22 180.8 27.6 260 158-428 103-392 (402)
41 PRK05077 frsA fermentation/res 99.8 5.8E-18 1.3E-22 182.0 26.1 244 118-421 166-412 (414)
42 KOG4409 Predicted hydrolase/ac 99.8 3.9E-18 8.4E-23 172.0 22.1 302 93-421 37-364 (365)
43 KOG4391 Predicted alpha/beta h 99.8 2.2E-18 4.7E-23 161.7 16.8 231 117-423 51-284 (300)
44 KOG1454 Predicted hydrolase/ac 99.8 1.5E-18 3.2E-23 180.4 17.0 276 121-421 26-324 (326)
45 PRK08775 homoserine O-acetyltr 99.8 1.3E-18 2.8E-23 183.0 16.0 232 179-423 86-341 (343)
46 TIGR03100 hydr1_PEP hydrolase, 99.8 9E-18 1.9E-22 171.1 20.8 254 128-419 9-273 (274)
47 PLN03084 alpha/beta hydrolase 99.8 1.8E-17 4E-22 175.9 22.7 242 159-419 126-382 (383)
48 TIGR01392 homoserO_Ac_trn homo 99.8 3E-18 6.4E-23 180.8 16.2 112 159-272 30-164 (351)
49 PRK14875 acetoin dehydrogenase 99.8 1.9E-17 4.1E-22 175.2 21.3 238 159-420 130-370 (371)
50 PRK05855 short chain dehydroge 99.8 2.8E-17 6E-22 184.2 21.3 271 123-424 5-295 (582)
51 PRK00175 metX homoserine O-ace 99.8 2.5E-17 5.5E-22 175.5 19.5 107 159-271 47-183 (379)
52 PLN02211 methyl indole-3-aceta 99.8 3.1E-17 6.7E-22 167.1 18.5 106 158-269 16-121 (273)
53 TIGR01836 PHA_synth_III_C poly 99.7 6E-17 1.3E-21 170.8 15.8 108 161-274 63-175 (350)
54 PRK10566 esterase; Provisional 99.7 3.4E-16 7.3E-21 156.5 19.1 209 158-421 25-248 (249)
55 PF00561 Abhydrolase_1: alpha/ 99.7 1.1E-16 2.4E-21 156.3 13.7 209 190-402 1-220 (230)
56 KOG1552 Predicted alpha/beta h 99.7 4.7E-16 1E-20 151.5 17.4 195 159-424 59-255 (258)
57 PLN02980 2-oxoglutarate decarb 99.7 3.8E-15 8.2E-20 183.4 26.6 247 159-424 1370-1642(1655)
58 PF12695 Abhydrolase_5: Alpha/ 99.7 9.7E-16 2.1E-20 139.5 15.1 144 162-397 1-145 (145)
59 KOG2382 Predicted alpha/beta h 99.7 3.2E-16 7E-21 157.8 12.5 243 158-421 50-313 (315)
60 KOG2984 Predicted hydrolase [G 99.6 2.4E-16 5.2E-21 146.6 7.4 228 162-420 44-275 (277)
61 TIGR00976 /NonD putative hydro 99.6 7.6E-15 1.6E-19 163.9 19.6 133 125-274 1-136 (550)
62 PRK06765 homoserine O-acetyltr 99.6 1.4E-14 3.1E-19 154.2 20.1 256 158-420 54-387 (389)
63 PRK11071 esterase YqiA; Provis 99.6 5.8E-15 1.3E-19 142.2 15.0 184 161-419 2-189 (190)
64 TIGR03101 hydr2_PEP hydrolase, 99.6 1.4E-14 3E-19 146.2 16.4 111 159-272 24-136 (266)
65 COG1506 DAP2 Dipeptidyl aminop 99.6 3.4E-14 7.3E-19 160.6 20.7 246 118-422 363-617 (620)
66 PF00326 Peptidase_S9: Prolyl 99.6 4.8E-15 1E-19 145.0 12.0 196 180-423 5-211 (213)
67 TIGR01838 PHA_synth_I poly(R)- 99.6 4.8E-14 1E-18 154.5 18.3 234 159-402 187-460 (532)
68 PF06500 DUF1100: Alpha/beta h 99.6 1.5E-13 3.4E-18 143.9 18.9 240 118-421 163-409 (411)
69 PRK07868 acyl-CoA synthetase; 99.6 1.9E-13 4.1E-18 162.7 21.5 256 159-424 66-364 (994)
70 PLN00021 chlorophyllase 99.5 5.2E-13 1.1E-17 138.2 20.2 115 132-269 38-165 (313)
71 COG2945 Predicted hydrolase of 99.5 2.4E-13 5.2E-18 126.4 14.1 176 158-419 26-205 (210)
72 PLN02442 S-formylglutathione h 99.5 1.5E-12 3.3E-17 133.3 21.1 215 121-397 19-262 (283)
73 KOG2624 Triglyceride lipase-ch 99.5 3E-13 6.5E-18 142.7 16.2 286 117-422 45-399 (403)
74 KOG2564 Predicted acetyltransf 99.5 7E-13 1.5E-17 129.6 16.8 106 158-267 72-179 (343)
75 KOG4667 Predicted esterase [Li 99.5 3.7E-13 8.1E-18 126.8 14.0 220 158-419 31-256 (269)
76 PRK11460 putative hydrolase; P 99.5 1.9E-12 4E-17 128.7 18.1 178 158-423 14-210 (232)
77 TIGR02821 fghA_ester_D S-formy 99.5 9.7E-12 2.1E-16 126.8 22.4 207 129-398 23-257 (275)
78 PRK10115 protease 2; Provision 99.4 1.9E-12 4.2E-17 147.4 17.7 223 119-397 415-653 (686)
79 TIGR01840 esterase_phb esteras 99.4 6.8E-12 1.5E-16 122.8 17.8 110 158-270 11-130 (212)
80 COG0596 MhpC Predicted hydrola 99.4 5.9E-12 1.3E-16 122.5 16.6 101 160-270 21-123 (282)
81 COG4757 Predicted alpha/beta h 99.4 9.9E-13 2.2E-17 125.3 9.6 248 123-402 8-267 (281)
82 PF02129 Peptidase_S15: X-Pro 99.4 9.2E-13 2E-17 134.1 10.1 130 129-274 1-140 (272)
83 PRK10162 acetyl esterase; Prov 99.4 3.1E-11 6.7E-16 125.7 20.7 247 118-422 55-316 (318)
84 PF05448 AXE1: Acetyl xylan es 99.4 5.4E-12 1.2E-16 130.9 14.6 245 116-420 52-319 (320)
85 PF01738 DLH: Dienelactone hyd 99.3 9.5E-12 2.1E-16 122.2 11.0 186 158-421 12-217 (218)
86 PF08538 DUF1749: Protein of u 99.3 8.7E-11 1.9E-15 118.7 15.3 245 159-419 32-303 (303)
87 TIGR01839 PHA_synth_II poly(R) 99.3 4.9E-11 1.1E-15 129.8 14.4 108 160-274 215-332 (560)
88 PF02230 Abhydrolase_2: Phosph 99.3 1.5E-10 3.2E-15 113.7 16.6 182 157-421 11-215 (216)
89 COG0412 Dienelactone hydrolase 99.3 4.6E-10 9.9E-15 111.7 20.1 207 122-422 4-234 (236)
90 TIGR01849 PHB_depoly_PhaZ poly 99.3 6.4E-11 1.4E-15 125.4 14.2 249 161-420 103-405 (406)
91 TIGR03230 lipo_lipase lipoprot 99.2 8.5E-11 1.8E-15 125.7 13.5 111 158-270 39-154 (442)
92 COG3458 Acetyl esterase (deace 99.2 2.4E-10 5.2E-15 111.6 14.8 241 118-421 54-317 (321)
93 cd00707 Pancreat_lipase_like P 99.2 4.1E-11 8.9E-16 122.1 9.8 111 158-270 34-147 (275)
94 PF06342 DUF1057: Alpha/beta h 99.2 2E-09 4.3E-14 106.8 19.3 126 125-270 11-137 (297)
95 PRK05371 x-prolyl-dipeptidyl a 99.1 5.4E-10 1.2E-14 128.5 16.1 227 180-423 270-521 (767)
96 PF06821 Ser_hydrolase: Serine 99.1 5.2E-10 1.1E-14 105.7 12.7 157 163-404 1-160 (171)
97 COG2021 MET2 Homoserine acetyl 99.1 2.5E-09 5.4E-14 109.8 18.5 114 158-273 49-185 (368)
98 COG2936 Predicted acyl esteras 99.1 1.2E-09 2.5E-14 118.7 16.0 139 118-275 17-164 (563)
99 PF02273 Acyl_transf_2: Acyl t 99.1 1.5E-09 3.2E-14 104.8 13.2 249 121-422 3-253 (294)
100 COG3571 Predicted hydrolase of 99.0 9.7E-09 2.1E-13 92.9 15.1 165 160-396 14-180 (213)
101 PF07859 Abhydrolase_3: alpha/ 99.0 1.8E-09 3.8E-14 105.2 9.5 102 163-272 1-112 (211)
102 PF12740 Chlorophyllase2: Chlo 99.0 2.4E-08 5.1E-13 99.4 16.8 103 158-269 15-130 (259)
103 COG0657 Aes Esterase/lipase [L 99.0 1.8E-08 3.9E-13 104.6 16.8 130 126-274 57-195 (312)
104 TIGR03502 lipase_Pla1_cef extr 99.0 4.1E-09 8.9E-14 119.5 12.3 94 159-254 448-576 (792)
105 PF12146 Hydrolase_4: Putative 98.9 2.5E-09 5.3E-14 87.7 7.7 46 159-206 15-60 (79)
106 KOG2931 Differentiation-relate 98.9 4.1E-07 9E-12 90.3 24.5 271 120-421 22-306 (326)
107 COG0400 Predicted esterase [Ge 98.9 4.2E-08 9.1E-13 95.2 15.4 176 156-421 14-205 (207)
108 PF00975 Thioesterase: Thioest 98.9 6.2E-08 1.4E-12 95.4 15.4 102 162-270 2-104 (229)
109 PF09752 DUF2048: Uncharacteri 98.8 1.4E-07 3.1E-12 96.9 17.7 107 158-268 90-208 (348)
110 KOG3043 Predicted hydrolase re 98.8 2.3E-08 5E-13 95.6 11.0 159 161-400 40-211 (242)
111 PF10230 DUF2305: Uncharacteri 98.8 9.1E-08 2E-12 97.1 16.0 107 160-270 2-122 (266)
112 COG3208 GrsT Predicted thioest 98.8 3.9E-08 8.4E-13 95.9 12.0 209 158-401 5-220 (244)
113 COG4188 Predicted dienelactone 98.8 3.9E-08 8.4E-13 101.4 12.0 97 158-256 69-182 (365)
114 PF05728 UPF0227: Uncharacteri 98.8 2E-07 4.4E-12 89.2 15.5 90 163-272 2-93 (187)
115 KOG2100 Dipeptidyl aminopeptid 98.8 3.5E-07 7.6E-12 105.2 19.3 240 117-424 497-750 (755)
116 PF12715 Abhydrolase_7: Abhydr 98.7 1.3E-08 2.9E-13 105.4 6.8 133 120-269 86-259 (390)
117 KOG1515 Arylacetamide deacetyl 98.7 8.9E-07 1.9E-11 92.0 20.1 252 125-421 66-335 (336)
118 PF03583 LIP: Secretory lipase 98.7 4.6E-07 1E-11 93.1 17.7 231 179-424 16-284 (290)
119 COG3243 PhaC Poly(3-hydroxyalk 98.7 6.9E-08 1.5E-12 100.5 10.6 109 160-275 107-222 (445)
120 PF06028 DUF915: Alpha/beta hy 98.7 1E-07 2.3E-12 95.5 11.3 113 159-274 11-147 (255)
121 PF10503 Esterase_phd: Esteras 98.7 5.9E-07 1.3E-11 88.1 16.2 108 159-269 15-131 (220)
122 PF03096 Ndr: Ndr family; Int 98.7 4.2E-07 9.1E-12 91.3 15.3 249 158-421 21-279 (283)
123 PF07819 PGAP1: PGAP1-like pro 98.7 3.2E-07 6.9E-12 90.7 14.1 109 160-273 4-126 (225)
124 COG3545 Predicted esterase of 98.6 1.4E-06 3E-11 80.8 14.8 176 161-420 3-178 (181)
125 KOG2281 Dipeptidyl aminopeptid 98.6 1E-06 2.2E-11 95.1 15.8 239 114-420 604-866 (867)
126 KOG4627 Kynurenine formamidase 98.6 2.4E-07 5.2E-12 87.3 9.0 185 158-404 65-254 (270)
127 PF03403 PAF-AH_p_II: Platelet 98.5 2.1E-07 4.6E-12 99.0 9.0 106 158-268 98-260 (379)
128 PF05677 DUF818: Chlamydia CHL 98.5 5E-06 1.1E-10 84.8 17.9 118 119-255 111-237 (365)
129 PF06057 VirJ: Bacterial virul 98.5 1.5E-06 3.3E-11 82.2 11.3 101 162-269 4-106 (192)
130 PF01674 Lipase_2: Lipase (cla 98.4 1.4E-07 3E-12 92.4 4.0 90 163-254 4-96 (219)
131 COG4099 Predicted peptidase [G 98.4 1.3E-05 2.8E-10 79.8 16.6 123 129-271 170-305 (387)
132 PLN02733 phosphatidylcholine-s 98.4 1.1E-06 2.3E-11 95.0 8.7 96 176-274 108-205 (440)
133 PF07224 Chlorophyllase: Chlor 98.3 1.3E-06 2.8E-11 85.6 8.0 103 158-269 44-156 (307)
134 PF00151 Lipase: Lipase; Inte 98.3 4.7E-07 1E-11 94.5 4.2 108 157-270 68-187 (331)
135 PF08840 BAAT_C: BAAT / Acyl-C 98.3 1.1E-06 2.4E-11 86.1 6.0 155 217-401 4-166 (213)
136 PF05705 DUF829: Eukaryotic pr 98.2 3.8E-05 8.3E-10 76.6 16.1 218 163-418 2-240 (240)
137 KOG1553 Predicted alpha/beta h 98.2 1.3E-05 2.9E-10 81.0 11.5 135 117-272 211-347 (517)
138 PF05990 DUF900: Alpha/beta hy 98.2 1.3E-05 2.9E-10 79.6 11.5 114 158-272 16-139 (233)
139 PF03959 FSH1: Serine hydrolas 98.2 1.9E-06 4.2E-11 84.4 4.9 109 159-270 3-145 (212)
140 KOG2237 Predicted serine prote 98.1 9.9E-06 2.1E-10 88.1 10.2 142 119-273 440-587 (712)
141 COG3509 LpqC Poly(3-hydroxybut 98.1 2.4E-05 5.1E-10 78.4 12.1 125 129-270 43-179 (312)
142 PF11339 DUF3141: Protein of u 98.1 5.2E-05 1.1E-09 81.1 14.9 102 158-274 67-179 (581)
143 COG1770 PtrB Protease II [Amin 98.1 2.6E-05 5.6E-10 85.5 12.9 228 121-401 420-660 (682)
144 KOG3847 Phospholipase A2 (plat 98.1 3.7E-05 7.9E-10 77.2 12.6 106 157-267 115-272 (399)
145 KOG3253 Predicted alpha/beta h 98.1 8.6E-06 1.9E-10 87.7 8.1 168 158-401 174-349 (784)
146 PRK10252 entF enterobactin syn 98.0 0.00017 3.8E-09 88.9 19.3 98 160-268 1068-1169(1296)
147 KOG2551 Phospholipase/carboxyh 98.0 0.00021 4.6E-09 68.8 14.8 65 352-424 159-223 (230)
148 COG4814 Uncharacterized protei 98.0 3.9E-05 8.5E-10 75.0 9.4 109 160-271 46-177 (288)
149 PF00756 Esterase: Putative es 97.9 3.9E-05 8.5E-10 76.6 9.0 115 157-273 21-153 (251)
150 PRK04940 hypothetical protein; 97.9 0.00039 8.4E-09 65.7 14.6 35 233-272 60-94 (180)
151 COG3319 Thioesterase domains o 97.9 7.2E-05 1.6E-09 75.0 10.1 102 161-271 1-104 (257)
152 KOG4840 Predicted hydrolases o 97.9 0.00019 4.2E-09 68.8 12.3 108 159-273 35-147 (299)
153 PF12048 DUF3530: Protein of u 97.8 0.00069 1.5E-08 70.3 16.9 111 158-270 85-229 (310)
154 PF05057 DUF676: Putative seri 97.8 4.5E-05 9.8E-10 75.0 7.4 40 233-272 78-127 (217)
155 KOG2565 Predicted hydrolases o 97.8 9.1E-05 2E-09 76.0 9.6 117 129-263 132-257 (469)
156 cd00312 Esterase_lipase Estera 97.8 0.00013 2.8E-09 80.7 10.8 127 130-271 76-214 (493)
157 smart00824 PKS_TE Thioesterase 97.7 0.0019 4.1E-08 61.6 17.0 89 173-268 11-100 (212)
158 KOG1551 Uncharacterized conser 97.7 0.00054 1.2E-08 67.3 12.5 248 129-422 98-367 (371)
159 KOG2112 Lysophospholipase [Lip 97.6 0.0011 2.4E-08 63.4 13.0 57 356-420 144-203 (206)
160 KOG3101 Esterase D [General fu 97.6 0.00024 5.3E-09 67.6 8.0 129 131-272 26-181 (283)
161 COG1505 Serine proteases of th 97.5 0.00029 6.3E-09 76.6 9.1 157 99-274 372-539 (648)
162 PTZ00472 serine carboxypeptida 97.5 0.0017 3.8E-08 71.1 15.0 112 157-270 74-216 (462)
163 COG4782 Uncharacterized protei 97.5 0.00057 1.2E-08 70.5 10.0 114 158-272 114-236 (377)
164 PRK10439 enterobactin/ferric e 97.5 0.0027 5.9E-08 68.5 15.2 107 158-270 207-323 (411)
165 KOG3975 Uncharacterized conser 97.4 0.0024 5.1E-08 62.6 12.8 110 158-269 27-146 (301)
166 PLN02606 palmitoyl-protein thi 97.4 0.0087 1.9E-07 61.0 17.4 106 159-271 26-133 (306)
167 PF05577 Peptidase_S28: Serine 97.4 0.0013 2.8E-08 71.6 11.9 112 158-272 27-150 (434)
168 COG1075 LipA Predicted acetylt 97.4 0.00057 1.2E-08 71.8 8.5 104 162-273 61-167 (336)
169 COG1073 Hydrolases of the alph 97.2 0.00081 1.8E-08 67.8 7.6 73 348-421 223-297 (299)
170 PF00135 COesterase: Carboxyle 97.1 0.0011 2.4E-08 73.6 8.2 125 131-268 107-243 (535)
171 COG2272 PnbA Carboxylesterase 97.1 0.0023 5E-08 68.7 9.4 113 158-271 92-218 (491)
172 PF02450 LCAT: Lecithin:choles 97.0 0.002 4.3E-08 69.1 8.0 88 177-273 66-163 (389)
173 KOG3967 Uncharacterized conser 97.0 0.0063 1.4E-07 58.2 10.3 115 158-272 99-229 (297)
174 PF04301 DUF452: Protein of un 96.9 0.016 3.5E-07 56.5 13.0 77 160-268 11-88 (213)
175 PF10340 DUF2424: Protein of u 96.9 0.0073 1.6E-07 63.6 10.8 109 159-272 121-237 (374)
176 KOG3724 Negative regulator of 96.8 0.0037 8E-08 70.0 8.1 102 159-270 88-220 (973)
177 PF11144 DUF2920: Protein of u 96.6 0.02 4.2E-07 60.6 11.4 105 158-264 33-213 (403)
178 PLN02633 palmitoyl protein thi 96.6 0.025 5.5E-07 57.8 11.8 106 158-271 24-132 (314)
179 cd00741 Lipase Lipase. Lipase 96.5 0.0075 1.6E-07 55.6 6.9 54 217-270 12-67 (153)
180 PF10142 PhoPQ_related: PhoPQ- 96.2 0.075 1.6E-06 56.1 13.4 153 231-424 170-323 (367)
181 PF04083 Abhydro_lipase: Parti 96.2 0.015 3.2E-07 45.4 5.8 50 117-175 9-58 (63)
182 PLN02517 phosphatidylcholine-s 96.1 0.0077 1.7E-07 66.3 5.2 92 179-272 159-265 (642)
183 PF01764 Lipase_3: Lipase (cla 96.0 0.016 3.4E-07 52.3 6.4 37 217-253 48-84 (140)
184 KOG2541 Palmitoyl protein thio 96.0 0.059 1.3E-06 53.6 10.3 103 160-270 24-128 (296)
185 PF07082 DUF1350: Protein of u 95.9 0.043 9.4E-07 54.3 9.2 97 159-267 16-122 (250)
186 COG2382 Fes Enterochelin ester 95.7 0.09 2E-06 53.4 10.8 108 157-270 95-212 (299)
187 cd00519 Lipase_3 Lipase (class 95.7 0.021 4.6E-07 56.4 6.1 38 217-254 112-149 (229)
188 COG0627 Predicted esterase [Ge 95.6 0.021 4.6E-07 59.2 6.0 115 157-273 51-190 (316)
189 PF08386 Abhydrolase_4: TAP-li 95.6 0.017 3.8E-07 49.7 4.5 61 355-420 33-93 (103)
190 COG3150 Predicted esterase [Ge 95.6 0.079 1.7E-06 49.2 8.8 90 163-270 2-91 (191)
191 PF00450 Peptidase_S10: Serine 95.5 0.19 4.1E-06 54.0 13.3 135 123-272 14-183 (415)
192 PF06259 Abhydrolase_8: Alpha/ 95.5 0.17 3.7E-06 48.0 11.2 52 217-270 92-144 (177)
193 KOG2183 Prolylcarboxypeptidase 95.5 0.083 1.8E-06 55.6 9.7 105 160-270 81-202 (492)
194 COG2819 Predicted hydrolase of 95.3 0.56 1.2E-05 47.1 14.8 43 225-269 127-171 (264)
195 KOG2369 Lecithin:cholesterol a 95.3 0.011 2.3E-07 63.2 2.7 90 176-271 124-226 (473)
196 PF01083 Cutinase: Cutinase; 95.1 0.037 8.1E-07 52.7 5.5 55 217-271 65-123 (179)
197 PF11187 DUF2974: Protein of u 94.8 0.066 1.4E-06 52.9 6.6 53 217-270 69-123 (224)
198 PF02089 Palm_thioest: Palmito 94.6 0.065 1.4E-06 54.3 6.1 108 158-270 4-116 (279)
199 PLN02454 triacylglycerol lipas 94.1 0.081 1.8E-06 56.5 5.6 38 216-253 209-248 (414)
200 KOG2182 Hydrolytic enzymes of 93.9 0.26 5.6E-06 53.3 9.0 111 158-271 84-208 (514)
201 PLN02162 triacylglycerol lipas 93.9 0.14 3E-06 55.3 6.9 53 218-270 263-321 (475)
202 PLN00413 triacylglycerol lipas 93.8 0.14 3E-06 55.4 6.9 52 218-269 269-326 (479)
203 COG3946 VirJ Type IV secretory 93.8 0.15 3.3E-06 53.6 6.8 86 162-254 262-347 (456)
204 COG4553 DepA Poly-beta-hydroxy 93.6 0.6 1.3E-05 47.1 10.2 256 159-423 102-409 (415)
205 COG5153 CVT17 Putative lipase 93.2 0.16 3.4E-06 50.9 5.5 52 217-273 260-311 (425)
206 KOG4540 Putative lipase essent 93.2 0.16 3.4E-06 50.9 5.5 52 217-273 260-311 (425)
207 PLN02934 triacylglycerol lipas 93.0 0.22 4.7E-06 54.4 6.7 35 218-252 306-340 (515)
208 PF11288 DUF3089: Protein of u 92.9 0.19 4.2E-06 48.7 5.6 81 189-269 45-135 (207)
209 PLN03016 sinapoylglucose-malat 92.6 1.5 3.3E-05 47.7 12.7 112 157-268 63-208 (433)
210 PLN02571 triacylglycerol lipas 91.7 0.25 5.4E-06 52.9 5.1 37 217-253 208-246 (413)
211 PF05576 Peptidase_S37: PS-10 91.6 0.52 1.1E-05 50.0 7.3 108 157-272 60-171 (448)
212 PLN02408 phospholipase A1 91.6 0.26 5.7E-06 51.9 5.2 38 217-254 182-221 (365)
213 PLN02209 serine carboxypeptida 91.6 2.5 5.3E-05 46.1 12.8 112 158-271 66-213 (437)
214 KOG2521 Uncharacterized conser 91.4 2.6 5.6E-05 44.3 12.2 241 159-424 38-293 (350)
215 KOG4372 Predicted alpha/beta h 91.3 0.35 7.5E-06 51.1 5.6 84 158-248 78-165 (405)
216 KOG4569 Predicted lipase [Lipi 90.4 0.39 8.4E-06 50.5 5.1 59 211-269 149-211 (336)
217 PLN02847 triacylglycerol lipas 90.1 0.52 1.1E-05 52.3 5.9 36 218-253 236-271 (633)
218 KOG1516 Carboxylesterase and r 90.0 0.37 8E-06 54.0 4.9 109 160-269 112-231 (545)
219 PLN02324 triacylglycerol lipas 90.0 0.45 9.8E-06 50.8 5.1 37 217-253 197-235 (415)
220 PLN02719 triacylglycerol lipas 89.0 0.54 1.2E-05 51.4 5.0 37 217-253 277-318 (518)
221 PLN02802 triacylglycerol lipas 88.7 0.6 1.3E-05 51.0 5.0 38 217-254 312-351 (509)
222 PLN02761 lipase class 3 family 87.8 0.7 1.5E-05 50.6 4.8 36 217-252 272-313 (527)
223 COG2939 Carboxypeptidase C (ca 87.7 3 6.5E-05 45.5 9.5 95 158-254 99-219 (498)
224 PLN02753 triacylglycerol lipas 87.7 0.71 1.5E-05 50.6 4.9 36 217-252 291-331 (531)
225 PLN02310 triacylglycerol lipas 87.6 0.59 1.3E-05 49.9 4.0 37 217-253 189-229 (405)
226 PLN03037 lipase class 3 family 86.2 0.72 1.6E-05 50.5 3.9 36 218-253 299-338 (525)
227 COG4947 Uncharacterized protei 85.6 1.9 4.1E-05 40.3 5.7 50 221-272 89-138 (227)
228 KOG1282 Serine carboxypeptidas 83.9 11 0.00023 41.3 11.5 127 123-268 47-211 (454)
229 PF05277 DUF726: Protein of un 83.8 3 6.4E-05 43.9 7.0 43 231-273 218-263 (345)
230 PF08237 PE-PPE: PE-PPE domain 83.7 4.3 9.2E-05 40.1 7.8 83 189-271 2-90 (225)
231 COG3673 Uncharacterized conser 79.2 11 0.00025 38.7 8.9 98 157-254 28-143 (423)
232 KOG4388 Hormone-sensitive lipa 79.2 4.8 0.0001 44.4 6.7 102 158-270 394-508 (880)
233 COG0529 CysC Adenylylsulfate k 76.8 14 0.00031 35.0 8.2 40 158-197 20-59 (197)
234 PF09994 DUF2235: Uncharacteri 73.8 21 0.00045 36.4 9.5 94 161-254 2-113 (277)
235 PLN02213 sinapoylglucose-malat 72.1 11 0.00025 39.1 7.2 79 191-270 3-95 (319)
236 PF06309 Torsin: Torsin; Inte 71.4 6.2 0.00013 35.2 4.3 34 157-190 49-82 (127)
237 COG4822 CbiK Cobalamin biosynt 67.2 27 0.00058 34.0 7.8 56 157-229 135-191 (265)
238 PF07519 Tannase: Tannase and 67.0 17 0.00036 40.2 7.5 87 184-273 54-153 (474)
239 TIGR03712 acc_sec_asp2 accesso 65.2 11 0.00024 41.0 5.5 103 155-270 284-389 (511)
240 PF06850 PHB_depo_C: PHB de-po 64.0 6.8 0.00015 37.6 3.2 67 353-420 130-201 (202)
241 KOG1202 Animal-type fatty acid 61.3 28 0.00061 42.0 7.9 94 158-268 2121-2217(2376)
242 PF01583 APS_kinase: Adenylyls 58.7 17 0.00036 33.8 4.7 38 160-197 1-38 (156)
243 KOG2029 Uncharacterized conser 58.6 21 0.00046 39.8 6.1 54 219-272 510-574 (697)
244 PF06441 EHN: Epoxide hydrolas 56.7 20 0.00042 31.4 4.6 35 126-175 73-107 (112)
245 PF03283 PAE: Pectinacetyleste 51.5 31 0.00067 36.6 6.0 35 217-251 138-174 (361)
246 PF03205 MobB: Molybdopterin g 50.0 30 0.00066 31.3 5.0 45 163-207 2-46 (140)
247 PF09949 DUF2183: Uncharacteri 48.6 1.4E+02 0.0029 25.6 8.3 81 179-264 14-96 (100)
248 KOG2385 Uncharacterized conser 48.0 34 0.00074 37.6 5.6 44 230-273 444-490 (633)
249 PF13396 PLDc_N: Phospholipase 47.7 7.9 0.00017 27.7 0.6 26 537-566 21-46 (46)
250 PF07519 Tannase: Tannase and 46.4 36 0.00078 37.6 5.7 64 356-421 353-427 (474)
251 TIGR03709 PPK2_rel_1 polyphosp 40.6 34 0.00073 34.7 4.0 40 158-197 53-92 (264)
252 PRK05282 (alpha)-aspartyl dipe 40.4 1.4E+02 0.0031 29.6 8.4 92 159-251 30-130 (233)
253 COG1073 Hydrolases of the alph 40.2 2.2 4.8E-05 42.5 -4.6 95 158-255 47-154 (299)
254 KOG1283 Serine carboxypeptidas 39.5 2.2E+02 0.0047 29.8 9.4 94 158-254 29-143 (414)
255 COG2240 PdxK Pyridoxal/pyridox 39.0 82 0.0018 32.1 6.5 64 165-240 10-81 (281)
256 TIGR03707 PPK2_P_aer polyphosp 37.4 40 0.00087 33.4 3.9 39 159-197 29-67 (230)
257 cd04951 GT1_WbdM_like This fam 35.9 1.9E+02 0.0042 29.3 9.1 38 162-199 2-39 (360)
258 KOG1532 GTPase XAB1, interacts 35.8 50 0.0011 33.7 4.2 41 157-197 15-55 (366)
259 cd03146 GAT1_Peptidase_E Type 35.8 2.2E+02 0.0048 27.5 8.9 85 159-249 30-129 (212)
260 PF01580 FtsK_SpoIIIE: FtsK/Sp 35.4 1.3E+02 0.0028 28.7 7.2 65 164-228 41-113 (205)
261 COG4287 PqaA PhoPQ-activated p 35.4 1E+02 0.0022 32.7 6.5 66 351-423 324-389 (507)
262 PRK00889 adenylylsulfate kinas 34.7 73 0.0016 29.5 5.2 37 161-197 4-40 (175)
263 COG1087 GalE UDP-glucose 4-epi 33.1 63 0.0014 33.4 4.6 64 179-242 14-84 (329)
264 cd01841 NnaC_like NnaC (CMP-Ne 30.9 2.2E+02 0.0048 25.9 7.7 75 161-239 23-97 (174)
265 TIGR00176 mobB molybdopterin-g 30.3 80 0.0017 29.1 4.5 38 164-201 2-39 (155)
266 PF03976 PPK2: Polyphosphate k 30.1 26 0.00055 34.7 1.2 40 159-198 29-68 (228)
267 KOG2170 ATPase of the AAA+ sup 30.1 71 0.0015 33.0 4.3 32 157-189 106-138 (344)
268 PRK07933 thymidylate kinase; V 29.3 1.1E+02 0.0023 29.8 5.5 42 163-204 2-43 (213)
269 CHL00175 minD septum-site dete 29.3 1E+02 0.0023 31.0 5.6 40 159-198 14-53 (281)
270 PRK10751 molybdopterin-guanine 29.1 1.1E+02 0.0024 28.9 5.3 43 160-202 5-47 (173)
271 PF05577 Peptidase_S28: Serine 28.7 82 0.0018 34.1 5.0 42 357-402 377-418 (434)
272 PLN02213 sinapoylglucose-malat 28.7 85 0.0018 32.6 4.9 60 356-420 233-316 (319)
273 cd05312 NAD_bind_1_malic_enz N 28.4 47 0.001 33.9 2.8 83 163-252 27-125 (279)
274 PRK03846 adenylylsulfate kinas 28.3 2.7E+02 0.0059 26.4 8.1 39 158-196 21-59 (198)
275 PF10081 Abhydrolase_9: Alpha/ 27.5 3.1E+02 0.0067 28.1 8.3 37 234-272 110-149 (289)
276 cd01983 Fer4_NifH The Fer4_Nif 27.3 93 0.002 24.7 4.0 32 165-196 3-34 (99)
277 COG1763 MobB Molybdopterin-gua 26.7 1.1E+02 0.0024 28.6 4.7 40 162-201 3-42 (161)
278 COG5192 BMS1 GTP-binding prote 26.0 7.1E+02 0.015 28.2 11.1 106 157-274 65-177 (1077)
279 PF01656 CbiA: CobQ/CobB/MinD/ 25.8 90 0.0019 29.1 4.2 33 165-197 3-35 (195)
280 cd04502 SGNH_hydrolase_like_7 25.7 2.2E+02 0.0048 25.9 6.7 75 162-240 23-97 (171)
281 PF09419 PGP_phosphatase: Mito 25.7 1.8E+02 0.0039 27.3 6.0 54 184-243 35-88 (168)
282 TIGR02069 cyanophycinase cyano 25.5 2.7E+02 0.0059 27.9 7.7 90 159-250 27-132 (250)
283 PF05576 Peptidase_S37: PS-10 25.2 80 0.0017 34.0 3.8 62 354-418 349-411 (448)
284 PF13721 SecD-TM1: SecD export 24.8 53 0.0012 28.0 2.1 24 29-52 3-26 (101)
285 PRK13230 nitrogenase reductase 23.8 1.2E+02 0.0026 30.6 4.9 40 162-202 3-42 (279)
286 TIGR00455 apsK adenylylsulfate 23.5 5.9E+02 0.013 23.5 9.9 39 159-197 16-54 (184)
287 PRK10824 glutaredoxin-4; Provi 23.3 4.4E+02 0.0095 23.1 7.6 83 158-256 13-95 (115)
288 cd01523 RHOD_Lact_B Member of 23.1 1.4E+02 0.003 24.7 4.3 34 158-199 60-93 (100)
289 TIGR01425 SRP54_euk signal rec 23.0 1.3E+02 0.0029 32.7 5.2 39 159-197 98-136 (429)
290 COG4088 Predicted nucleotide k 22.7 87 0.0019 30.7 3.3 35 163-197 3-37 (261)
291 PF00450 Peptidase_S10: Serine 22.2 63 0.0014 34.4 2.6 60 356-419 330-414 (415)
292 cd02036 MinD Bacterial cell di 21.7 1.5E+02 0.0031 27.2 4.7 35 163-197 2-36 (179)
293 KOG3491 Predicted membrane pro 21.6 83 0.0018 23.9 2.2 22 540-565 39-60 (65)
294 cd03028 GRX_PICOT_like Glutare 21.5 4.5E+02 0.0098 21.4 7.3 82 158-255 6-87 (90)
295 PF08484 Methyltransf_14: C-me 21.4 1.9E+02 0.0041 26.9 5.2 44 217-264 55-98 (160)
296 PLN03016 sinapoylglucose-malat 21.4 1.5E+02 0.0032 32.4 5.2 60 356-420 347-430 (433)
297 PF12242 Eno-Rase_NADH_b: NAD( 21.4 1.3E+02 0.0028 24.4 3.5 44 213-256 17-63 (78)
298 TIGR03063 srtB_target sortase 21.2 45 0.00098 21.7 0.7 11 554-564 17-27 (29)
299 PLN02209 serine carboxypeptida 21.2 1.5E+02 0.0032 32.5 5.1 59 356-419 351-433 (437)
300 PTZ00472 serine carboxypeptida 21.0 1.2E+02 0.0026 33.4 4.4 60 356-419 364-457 (462)
301 PF11713 Peptidase_C80: Peptid 20.6 46 0.001 30.9 1.0 49 196-245 60-116 (157)
302 TIGR03371 cellulose_yhjQ cellu 20.6 1.6E+02 0.0035 28.7 4.9 40 162-201 3-42 (246)
303 COG1089 Gmd GDP-D-mannose dehy 20.5 2.9E+02 0.0064 28.5 6.6 74 163-240 4-88 (345)
304 cd03811 GT1_WabH_like This fam 20.5 8.1E+02 0.017 23.9 10.7 39 162-200 2-40 (353)
305 PF01935 DUF87: Domain of unkn 20.4 1.4E+02 0.0029 29.0 4.3 35 165-199 27-62 (229)
306 PF06624 RAMP4: Ribosome assoc 20.3 60 0.0013 25.3 1.4 25 536-564 35-59 (63)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=3.5e-68 Score=547.44 Aligned_cols=393 Identities=42% Similarity=0.744 Sum_probs=354.2
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhheeeeeeeeccccccccCCCCcEEEeCCCchhhHHHhhccccccCCcccCCCCCc
Q 008093 22 LLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSS 101 (578)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~cp~l~~~y~P~~wl~~ 101 (578)
++++.....++..+++.+++.+..++|.+.++++. .+++.+++. +++|.++++++||.|+++|.|++|+++
T Consensus 4 l~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~l~~~-~~~f~~~l~~~~~~l~~~y~p~~w~~~ 74 (409)
T KOG1838|consen 4 LLFQSLLGPVLSPVLLGLLIGVAVVLYAFLYLKSP--------PRKPSLFCG-DSGFARFLVPKCPLLEEKYLPTLWLFS 74 (409)
T ss_pred ccccccccccccHHHHHHhhhhheeeeecceeecc--------CCCCeeecC-chHHHHHHHhhccccccccccceeecC
Confidence 45555556667777777777778888999998862 455656555 689999999999999999999999999
Q ss_pred hhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH
Q 008093 102 PHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL 181 (578)
Q Consensus 102 ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l 181 (578)
||+||++..+++++|.+.|+|++++++|||++++||+.+++... ...+.+.|+||++||++|+|.+.|++++
T Consensus 75 ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~--------~~~~~~~P~vvilpGltg~S~~~YVr~l 146 (409)
T KOG1838|consen 75 GHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSRC--------RTDDGTDPIVVILPGLTGGSHESYVRHL 146 (409)
T ss_pred CeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCccccc--------CCCCCCCcEEEEecCCCCCChhHHHHHH
Confidence 99999999999999999999999999999999999998765310 0223577999999999999999999999
Q ss_pred HHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCcc
Q 008093 182 VFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVA 261 (578)
Q Consensus 182 ~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~ 261 (578)
+..++++||+|+++|.||||+++.+++++|+++|++|+.++++|++++||.+|++++|+||||+++++|++|.++++++.
T Consensus 147 v~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~ 226 (409)
T KOG1838|consen 147 VHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLI 226 (409)
T ss_pred HHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH
Q 008093 262 GAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD 340 (578)
Q Consensus 262 ~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~ 340 (578)
+++++|.|||.......+.+...+++|++.++.++++++..+.+ .+....+++.+.+.++++|||+.++++.+||++++
T Consensus 227 ~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~d 306 (409)
T KOG1838|consen 227 AAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVD 306 (409)
T ss_pred eEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHH
Confidence 99999999999888888888889999999999999999998888 56667889999999999999999999999999999
Q ss_pred HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcc-cHHHHHHHHHH
Q 008093 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGM-WWVRAVNEYLG 419 (578)
Q Consensus 341 ~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~-w~~~~v~eFL~ 419 (578)
+||+.+|+.+++++|++|+|+|++.|||++|.+.++...+..+|++.++++.+|||+||+||+.|... |+.+.+.+|+.
T Consensus 307 eYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 307 EYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred HHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999777654 55565999999
Q ss_pred hhcCCCcccccc
Q 008093 420 VLHSSPYMHVRK 431 (578)
Q Consensus 420 ~~~~~~~~~~~~ 431 (578)
.+......++.+
T Consensus 387 ~~~~~~~~~~~~ 398 (409)
T KOG1838|consen 387 NAIFQDEVGRHR 398 (409)
T ss_pred HHHhhhcccccC
Confidence 987665554443
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=9.2e-54 Score=425.79 Aligned_cols=318 Identities=33% Similarity=0.557 Sum_probs=289.3
Q ss_pred Cccc-CCCCCchhHHHhhh--hhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECC
Q 008093 92 RYLV-TPWLSSPHIQTAFL--HFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG 168 (578)
Q Consensus 92 ~y~P-~~wl~~ghlQT~~~--~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHG 168 (578)
+|.| ++|++|||+||++. ..+++.+.+.|+||.+.++||+.+.+||..++. +..+|.||++||
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~--------------~~~~P~vVl~HG 83 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR--------------AAKKPLVVLFHG 83 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc--------------ccCCceEEEEec
Confidence 5777 78899999999998 567888999999999999999999999998644 466799999999
Q ss_pred CCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHH
Q 008093 169 LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 248 (578)
Q Consensus 169 l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial 248 (578)
++|++.+.|++.+++.+.++||.+|++|.|||+++..+.+++|+.++++|+..++++++++++..|+.+||+||||++++
T Consensus 84 L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa 163 (345)
T COG0429 84 LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLA 163 (345)
T ss_pred cCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc-c-CC-HHHHhccCCHHHH
Q 008093 249 KYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR-L-AN-WEGIKKSRSIRDF 325 (578)
Q Consensus 249 ~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~-~-~d-~~~i~~~~s~~ef 325 (578)
+|+++.++++++.+++.+|.|+|+..+...+...+..++|.+.+...|++++..+...+.. . .+ .+.+++.+++++|
T Consensus 164 ~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eF 243 (345)
T COG0429 164 NYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREF 243 (345)
T ss_pred HHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhc
Confidence 9999999999999999999999999888888877655899999999999888877666622 1 22 4678889999999
Q ss_pred HhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccccccc
Q 008093 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTA 405 (578)
Q Consensus 326 d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~ 405 (578)
|+.+|.+.+||.++++||+.+|+.+.+++|++|+|+||+.|||+++++.+|......++++.+.++++|||+||+.+...
T Consensus 244 D~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~ 323 (345)
T COG0429 244 DDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLL 323 (345)
T ss_pred cceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccc
Confidence 99999999999999999999999999999999999999999999999999987666999999999999999999997332
Q ss_pred Cc-ccHHHHHHHHHHhhcC
Q 008093 406 AG-MWWVRAVNEYLGVLHS 423 (578)
Q Consensus 406 ~~-~w~~~~v~eFL~~~~~ 423 (578)
+. .|..+++.+|++.+.+
T Consensus 324 ~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 324 HPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred cchhhHHHHHHHHHHHHHh
Confidence 33 3999999999998754
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=1.4e-50 Score=431.51 Aligned_cols=345 Identities=37% Similarity=0.661 Sum_probs=286.7
Q ss_pred cEEEeCCCchhhHHHhhccccccCCcccCCCCCchhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCc
Q 008093 68 VRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDV 147 (578)
Q Consensus 68 ~~l~~~~~~~~~~~~~~~cp~l~~~y~P~~wl~~ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~ 147 (578)
+..++++....+++++++||+|.++|.|++|++|||+||++..++++.+.+.|+|+.+.++||+++.+||+.+...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~---- 94 (388)
T PLN02511 19 EHSSLEVIGGGRDSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDR---- 94 (388)
T ss_pred CccceeeccchHHHHHHhhhhhcCCccCCccCCCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccc----
Confidence 3344444455689999999999999999999999999999999998888899999999999999999999864210
Q ss_pred cccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 008093 148 FHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLH 227 (578)
Q Consensus 148 ~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~ 227 (578)
....++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+.+.++.+..++++|+.+++++++
T Consensus 95 -------~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~ 167 (388)
T PLN02511 95 -------ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVA 167 (388)
T ss_pred -------cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHH
Confidence 1124678999999999888877888888888899999999999999999887778888899999999999999
Q ss_pred HHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccc
Q 008093 228 HEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 228 ~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
.+++..+++++||||||+++++|++++++..+|.+++++++|+++......+... ....|+..+...+++....+...+
T Consensus 168 ~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~~~~l~~~~~~~~~~~ 246 (388)
T PLN02511 168 GRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKALAKALRKIFAKHALLF 246 (388)
T ss_pred HHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999999999999855699999999999875444333333 235666666666655544332222
Q ss_pred c---ccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 308 S---RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 308 ~---~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
. ...+...+.+.+++++|++.++....+|.+.++||...++...+++|++|+|+|+|+||+++|.+..+......++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p 326 (388)
T PLN02511 247 EGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP 326 (388)
T ss_pred hhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC
Confidence 1 1234556677889999999999999999999999999999999999999999999999999998877655667789
Q ss_pred CEEEEEeCCCCcccccccccc--CcccHHHHHHHHHHhhcCC
Q 008093 385 NVVLATTWHGGHLAFFEGLTA--AGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 385 ~~~l~~~~~GGH~~~~eg~~~--~~~w~~~~v~eFL~~~~~~ 424 (578)
+++++++++|||++|+|+... ...|+++.+.+||+.+.+.
T Consensus 327 ~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 327 NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999999999999997321 2359999999999988643
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=5.8e-45 Score=379.89 Aligned_cols=317 Identities=29% Similarity=0.459 Sum_probs=265.7
Q ss_pred CCcccCCCCCchhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC
Q 008093 91 GRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT 170 (578)
Q Consensus 91 ~~y~P~~wl~~ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~ 170 (578)
.+|.||+|+.|||+||++..++++.+.++++|+.++++||+.+.++|...+. ....+|+||++||++
T Consensus 2 ~~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~-------------~~~~~p~vll~HG~~ 68 (324)
T PRK10985 2 AEFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA-------------QARHKPRLVLFHGLE 68 (324)
T ss_pred CCCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc-------------cCCCCCEEEEeCCCC
Confidence 4699999999999999999999888889999999999999999999975432 124578999999998
Q ss_pred CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 171 G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
|++.+.|++.++..|.++||+|+++|+||||+++...++.+..++.+|+.+++++++++++..+++++||||||++++.|
T Consensus 69 g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 69 GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHH
Confidence 88777788889999999999999999999999876666677777889999999999998888899999999999999999
Q ss_pred HhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc--cCCHHHHhccCCHHHHHhh
Q 008093 251 LGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR--LANWEGIKKSRSIRDFDSH 328 (578)
Q Consensus 251 a~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~--~~d~~~i~~~~s~~efd~~ 328 (578)
+++++++.++.++|++++|+++..+...+.... .++|.+.+...++.........+.. ..+.+.+...+++++||+.
T Consensus 149 ~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 149 LAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGF-SRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred HHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 999876546999999999999876655554432 4566666666665544332222222 2355677888999999999
Q ss_pred hhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccc-cCc
Q 008093 329 ATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLT-AAG 407 (578)
Q Consensus 329 ~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~-~~~ 407 (578)
++.+..+|.+..+||...+....+++|++|+|+|+|++|++++.+..+. ..+..+++.+.++++|||++|+||.. ...
T Consensus 228 ~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 228 ITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred heeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceeeCCCCCCCCC
Confidence 9999999999999999999888999999999999999999999876664 34567889999999999999999853 345
Q ss_pred ccHHHHHHHHHHhhc
Q 008093 408 MWWVRAVNEYLGVLH 422 (578)
Q Consensus 408 ~w~~~~v~eFL~~~~ 422 (578)
.|+.+.+.+|++.+.
T Consensus 307 ~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 307 MWLEQRIPDWLTTYL 321 (324)
T ss_pred ccHHHHHHHHHHHhh
Confidence 799999999998764
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=3.2e-24 Score=224.05 Aligned_cols=278 Identities=14% Similarity=0.103 Sum_probs=167.9
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+++++..++..||..+.+..+.++.. .+.+++||++||++++. .++...++..|.++||+|+++|
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~-------------~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D 94 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS-------------SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALD 94 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC-------------CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEec
Confidence 366788889999999998865444220 13568899999995443 3333677888989999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 197 HRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+||||.|+........ ....+|+.+++++++.. ++..+++++||||||.+++.++.++|+ +|+++|++++..+..
T Consensus 95 ~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 95 LEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKIS 172 (330)
T ss_pred CCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCC
Confidence 9999998643221111 23468999999999764 345689999999999999999999888 899999998865432
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCC---C---HHHHHHhC-
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFE---T---VDTYYRNC- 346 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~---~---~~~yy~~~- 346 (578)
.... .......+ ...+..+. +.+........+...................|. . .....+..
T Consensus 173 ~~~~--~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (330)
T PLN02298 173 DKIR--PPWPIPQI-----LTFVARFL----PTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD 241 (330)
T ss_pred cccC--CchHHHHH-----HHHHHHHC----CCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH
Confidence 2100 00000000 00001110 000000000000000000000000000000111 0 11111111
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHhhcC
Q 008093 347 SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVLHS 423 (578)
Q Consensus 347 s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~~~eg~~~~~--~w~~~~v~eFL~~~~~ 423 (578)
.....+.+|++|+|+|+|++|+++|.+....... ...++.++.+++++||..+++. ++. ..+.+.+.+||++...
T Consensus 242 ~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~--pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 242 YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGE--PDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCC--CHHHHHHHHHHHHHHHHHhcc
Confidence 0124578899999999999999999886544222 2345789999999999998873 322 3567888999988653
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=1.4e-23 Score=213.17 Aligned_cols=263 Identities=13% Similarity=0.104 Sum_probs=162.0
Q ss_pred EEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 124 ~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
++..+||..+.+.++.|.+ ..+++|+++||++ ++...| ..++..|.++||+|+++|+||||.|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~---------------~~~~~v~llHG~~-~~~~~~-~~~~~~l~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT---------------YPKALVFISHGAG-EHSGRY-EELAENISSLGILVFSHDHIGHGRS 66 (276)
T ss_pred eeecCCCCEEEEEeccCCC---------------CCCEEEEEeCCCc-cccchH-HHHHHHHHhCCCEEEEccCCCCCCC
Confidence 4567899999887766532 3568888889995 455556 7899999999999999999999998
Q ss_pred CCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhH
Q 008093 204 SITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRR 282 (578)
Q Consensus 204 ~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~ 282 (578)
+........ ..+.+|+.+.++++++.++..+++++||||||.+++.++..+|+ .++++|+++++.+.... .
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~------~ 138 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAV------P 138 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccc------c
Confidence 753211111 23456777778777777777899999999999999999999888 79999999986542110 0
Q ss_pred HHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC---CCCC--HHHHHHh-CCcccccCCCc
Q 008093 283 LIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG---KFET--VDTYYRN-CSSSTYVGNVS 356 (578)
Q Consensus 283 ~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~---g~~~--~~~yy~~-~s~~~~l~~I~ 356 (578)
. ...+...+. ..... .... .......+ .+...+.......+.. .... ....... ......+.+++
T Consensus 139 ~-~~~~~~~~~----~~~~~-~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 209 (276)
T PHA02857 139 R-LNLLAAKLM----GIFYP-NKIV-GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIK 209 (276)
T ss_pred H-HHHHHHHHH----HHhCC-CCcc-CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCC
Confidence 0 000011000 00000 0000 00000000 0011111001000000 0000 0111110 11234678899
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+|+|+++|++|.++|.+..........+++++.+++++||..+.|.. +....+.+.+.+||+..
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 99999999999999988665543334457899999999999998831 11234677888898863
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=1.1e-23 Score=221.96 Aligned_cols=252 Identities=13% Similarity=0.107 Sum_probs=148.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHH--CCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~--~~~~~ 234 (578)
+.+|+|||+||+++ +...|++.++..|+++||+|+++|+||||.|+........ ..+.+|+.++++.+... ++..+
T Consensus 85 ~~~~~iv~lHG~~~-~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~ 163 (349)
T PLN02385 85 RPKAAVCFCHGYGD-TCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLP 163 (349)
T ss_pred CCCeEEEEECCCCC-ccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 45789999999955 4344557888999989999999999999999754222112 24567888888877653 34568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE 314 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~ 314 (578)
++++||||||.+++.++.++|+ .++++|++++........ ........+... +....... ..+.......
T Consensus 164 ~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~--~~~~~~~~~~~~-----~~~~~p~~-~~~~~~~~~~ 233 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDV--VPPPLVLQILIL-----LANLLPKA-KLVPQKDLAE 233 (349)
T ss_pred EEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccc--cCchHHHHHHHH-----HHHHCCCc-eecCCCcccc
Confidence 9999999999999999999998 899999998765432110 000000111110 00100000 0000000000
Q ss_pred HHhccCCHHHHHhhhhhcc---CCCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEE
Q 008093 315 GIKKSRSIRDFDSHATCLV---GKFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLA 389 (578)
Q Consensus 315 ~i~~~~s~~efd~~~~~~~---~g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~ 389 (578)
.........+......... ..+....+.+... .....+.+|++|+|+|+|++|+++|.+........ .++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~ 313 (349)
T PLN02385 234 LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLK 313 (349)
T ss_pred ccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEE
Confidence 0000000000000000000 0111112222211 12345788999999999999999998755443222 24678999
Q ss_pred EeCCCCccccccccccCc--ccHHHHHHHHHHhhc
Q 008093 390 TTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVLH 422 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~--~w~~~~v~eFL~~~~ 422 (578)
+++++||+.+.|. ++. ..+.+.+.+||++..
T Consensus 314 ~i~~~gH~l~~e~--p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 314 LYEDAYHSILEGE--PDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EeCCCeeecccCC--ChhhHHHHHHHHHHHHHHhc
Confidence 9999999988773 332 126778899998754
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=4.2e-22 Score=204.74 Aligned_cols=270 Identities=18% Similarity=0.178 Sum_probs=173.7
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.....+...||..+.+.-+.+.. +.+.+||++||+ +.+...| ..++..|..+||.|+++|+||
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~---------------~~~g~Vvl~HG~-~Eh~~ry-~~la~~l~~~G~~V~~~D~RG 71 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE---------------PPKGVVVLVHGL-GEHSGRY-EELADDLAARGFDVYALDLRG 71 (298)
T ss_pred cccceeecCCCceEEEEeecCCC---------------CCCcEEEEecCc-hHHHHHH-HHHHHHHHhCCCEEEEecCCC
Confidence 35567888899999776655432 333789999999 5677778 789999999999999999999
Q ss_pred CCCCCC-CCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH
Q 008093 200 LGGVSI-TSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 200 ~G~S~~-~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||.|.. .....-. ..+.+|+.++++.+...++..+++++||||||.|++.|+.+++. +|+++|+.+|.+....
T Consensus 72 hG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~--- 146 (298)
T COG2267 72 HGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGG--- 146 (298)
T ss_pred CCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCCh---
Confidence 999973 2222111 24557999999999887888999999999999999999999986 8999999888776653
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHh---hhcccccccCCHHHHhccCCHHHHHhhhhhcc--CCCC---CHHHHHHhCC--
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQ---LHEPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFE---TVDTYYRNCS-- 347 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~---~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~--~g~~---~~~~yy~~~s-- 347 (578)
..... .........+.+... ... ..........+ .+.....+.....+. .+.. .+..+.....
T Consensus 147 ~~~~~----~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~ 219 (298)
T COG2267 147 AILRL----ILARLALKLLGRIRPKLPVDS-NLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVP 219 (298)
T ss_pred hHHHH----HHHHHhcccccccccccccCc-ccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhccc
Confidence 00000 001111111111100 000 00000001111 122222222222221 1222 1222333322
Q ss_pred cccccCCCccceEEEEeCCCCCCC-CCCc-chHHHhcCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHhh
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCT-VEAI-PWDECRANKNVVLATTWHGGHLAFFEGLTAAG--MWWVRAVNEYLGVL 421 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp-~~~~-~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~--~w~~~~v~eFL~~~ 421 (578)
......++++|+|+++|++|++++ .+.. ........+++.+.+++++.|-.+.| ++. ..+.+.+.+|+.+.
T Consensus 220 ~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E---~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 220 ALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNE---PDRAREEVLKDILAWLAEA 294 (298)
T ss_pred chhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcC---cchHHHHHHHHHHHHHHhh
Confidence 334467789999999999999999 4543 33455677889999999999999999 443 45667777777764
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=99.89 E-value=4.9e-22 Score=207.81 Aligned_cols=287 Identities=15% Similarity=0.125 Sum_probs=164.8
Q ss_pred hHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHH
Q 008093 103 HIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV 182 (578)
Q Consensus 103 hlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~ 182 (578)
..|+....++. ..+...+...||..+.+..+.++ ..+++||++||++ ++...| ..++
T Consensus 18 ~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~----------------~~~~~vll~HG~~-~~~~~y-~~~~ 74 (330)
T PRK10749 18 FTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAP----------------HHDRVVVICPGRI-ESYVKY-AELA 74 (330)
T ss_pred HHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCC----------------CCCcEEEEECCcc-chHHHH-HHHH
Confidence 35565555542 22445666778988876544331 2456899999995 455556 6788
Q ss_pred HHHHhCCceEEEEeCCCCCCCCCCCCC-----CCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 183 FNTAKRGWNVVVSNHRGLGGVSITSDC-----FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 183 ~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-----~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
..+.++||+|+++|+||||.|+..... .+. ..+.+|+.++++.+...++..+++++||||||.+++.++..+|+
T Consensus 75 ~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~ 154 (330)
T PRK10749 75 YDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG 154 (330)
T ss_pred HHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC
Confidence 888899999999999999999753221 111 24557888888887766677899999999999999999999988
Q ss_pred CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhc---ccccccC-CHHHHhccC-CHHHHHhhhh-
Q 008093 257 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE---PRYSRLA-NWEGIKKSR-SIRDFDSHAT- 330 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~---~~l~~~~-d~~~i~~~~-s~~efd~~~~- 330 (578)
.++++|++++......... ......+... +.. ......... ....... ....+.... ...++.+.+.
T Consensus 155 --~v~~lvl~~p~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 227 (330)
T PRK10749 155 --VFDAIALCAPMFGIVLPLP---SWMARRILNW-AEG-HPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYAD 227 (330)
T ss_pred --CcceEEEECchhccCCCCC---cHHHHHHHHH-HHH-hcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHh
Confidence 8999999987643211100 0001111111 000 000000000 0000000 000000000 0001111111
Q ss_pred hcc--CCCCCH---HHHHHh-CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh------cCCCEEEEEeCCCCccc
Q 008093 331 CLV--GKFETV---DTYYRN-CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR------ANKNVVLATTWHGGHLA 398 (578)
Q Consensus 331 ~~~--~g~~~~---~~yy~~-~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~------~~~~~~l~~~~~GGH~~ 398 (578)
.+. .+.... .+.+.. ......+.++++|+|+|+|++|++++.+........ ..+++++++++++||..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~ 307 (330)
T PRK10749 228 DPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEI 307 (330)
T ss_pred CCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchh
Confidence 110 000111 111111 112345788999999999999999998754432111 12567899999999999
Q ss_pred cccccccCcccHHHHHHHHHHh
Q 008093 399 FFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 399 ~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.|... .+..+.+.|.+||++
T Consensus 308 ~~E~~~-~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 308 LFEKDA-MRSVALNAIVDFFNR 328 (330)
T ss_pred hhCCcH-HHHHHHHHHHHHHhh
Confidence 988310 123466788888875
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=6.1e-22 Score=201.46 Aligned_cols=247 Identities=15% Similarity=0.146 Sum_probs=146.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..++|||+||++++ ...| ..+++.|.+ +|+|+++|+||||.|+..........+.+|+.++++++. ..+++++
T Consensus 24 ~~~plvllHG~~~~-~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~Lv 96 (276)
T TIGR02240 24 GLTPLLIFNGIGAN-LELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAI 96 (276)
T ss_pred CCCcEEEEeCCCcc-hHHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEE
Confidence 34568999999554 4455 677887765 799999999999999754222222345567777777663 3589999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHH-HHHHHHHHHHHhH--HHHHhhhcccccccCCHHH
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRL-IQKIYDRALTIGL--QDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~-~~~~~~~~l~~~l--~~~~~~~~~~l~~~~d~~~ 315 (578)
||||||.+++.+|.++|+ +|+++|+++++.............. .... ...+.... ..........+. .+.+
T Consensus 97 G~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~- 170 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASP-RRYIQPSHGIHIAPDIYGGAFR--RDPE- 170 (276)
T ss_pred EECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCc-hhhhccccccchhhhhccceee--ccch-
Confidence 999999999999999998 8999999998754211000000000 0000 00000000 000000000000 0000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHH--hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYR--NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH 393 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~--~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 393 (578)
....+.... ...........+.. .......+.+|++|+|+|+|++|+++|.+.... .....++.++.+++
T Consensus 171 -----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~-l~~~~~~~~~~~i~- 242 (276)
T TIGR02240 171 -----LAMAHASKV-RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL-LAWRIPNAELHIID- 242 (276)
T ss_pred -----hhhhhhhhc-ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH-HHHhCCCCEEEEEc-
Confidence 000000000 00000000111111 111224578999999999999999999876544 44566788888887
Q ss_pred CCccccccccccCcccHHHHHHHHHHhhcCCCccccc
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMHVR 430 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~~~~~~ 430 (578)
+||+.+.|. | ..+.+.+.+|+++.....++|.+
T Consensus 243 ~gH~~~~e~--p--~~~~~~i~~fl~~~~~~~~~~~~ 275 (276)
T TIGR02240 243 DGHLFLITR--A--EAVAPIIMKFLAEERQRAVMHPR 275 (276)
T ss_pred CCCchhhcc--H--HHHHHHHHHHHHHhhhhccCCCC
Confidence 599999883 3 36999999999998888877754
No 11
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=2.9e-21 Score=205.93 Aligned_cols=271 Identities=16% Similarity=0.150 Sum_probs=164.2
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
+....+..+||..+.+..+.+.. .+.+++||++||+++ +...| ..++..|.++||+|+++|+||
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~--------------~~~~~~Vl~lHG~~~-~~~~~-~~~a~~L~~~Gy~V~~~D~rG 173 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA--------------GEMRGILIIIHGLNE-HSGRY-LHFAKQLTSCGFGVYAMDWIG 173 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC--------------CCCceEEEEECCchH-HHHHH-HHHHHHHHHCCCEEEEeCCCC
Confidence 34445666777777655554422 245678999999954 44446 788999999999999999999
Q ss_pred CCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcchhhhhH
Q 008093 200 LGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLLIGDR 277 (578)
Q Consensus 200 ~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d~~~~~~ 277 (578)
||.|+........ ..+.+|+.++++++..+++..+++++||||||.+++.++. +++ ...++++|+.++..+......
T Consensus 174 hG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 174 HGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 9999765322222 2345899999999998887779999999999999997765 442 126999999887654432111
Q ss_pred HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhcc--CCCCCHH---HHHHhC-Ccccc
Q 008093 278 FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFETVD---TYYRNC-SSSTY 351 (578)
Q Consensus 278 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~--~g~~~~~---~yy~~~-s~~~~ 351 (578)
... ....++... ...+ .+.... .....-..........+..+. .+..... +.++.. .....
T Consensus 253 -~~~-~~~~l~~~~----~p~~------~~~~~~-~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~ 319 (395)
T PLN02652 253 -IVG-AVAPIFSLV----APRF------QFKGAN-KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRN 319 (395)
T ss_pred -HHH-HHHHHHHHh----CCCC------cccCcc-cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhh
Confidence 000 011111110 0000 000000 000000000011111110010 1111111 111111 11346
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECR-ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+.+|++|+|+++|++|.++|.+........ .++++.+.++++++|..++| +++..+.+.+.+||+...+
T Consensus 320 L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 320 FKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred cccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 788999999999999999998755443222 44567889999999999887 4455688999999997653
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=6.7e-22 Score=203.92 Aligned_cols=270 Identities=14% Similarity=0.090 Sum_probs=149.4
Q ss_pred CCCCCeeEEEEEecC--CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceE
Q 008093 115 PPCFSYRRQLFRLSD--GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNV 192 (578)
Q Consensus 115 ~~~~~y~r~~l~~~D--G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~V 192 (578)
.+.+++....+.+.+ |+.+.+.+.... ++++|+|||+||+++ +...| ..+++.|.+.||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~G---------------~~~~~~lvliHG~~~-~~~~w-~~~~~~L~~~gy~v 76 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDEG---------------PADGPPVLLLHGEPS-WSYLY-RKMIPILAAAGHRV 76 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEecC---------------CCCCCEEEEECCCCC-chhhH-HHHHHHHHhCCCEE
Confidence 344555555666654 665555544321 124578999999954 45456 78888998889999
Q ss_pred EEEeCCCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 193 VVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++|+||||.|..... ..++ ..+.+|+.++++++ +..+++++||||||.+++.++.++|+ +|.++|++++..
T Consensus 77 i~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 150 (302)
T PRK00870 77 IAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTGL 150 (302)
T ss_pred EEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCCC
Confidence 9999999999965422 1122 22334555554443 45689999999999999999999988 899999998643
Q ss_pred chhhh--hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhcc---CCHHHHHhhh--hhc--cCCCCC-HH
Q 008093 271 DLLIG--DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS---RSIRDFDSHA--TCL--VGKFET-VD 340 (578)
Q Consensus 271 d~~~~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~---~s~~efd~~~--~~~--~~g~~~-~~ 340 (578)
..... ...... + ..+........+....... .......+..... .....+.... ... ..+... ..
T Consensus 151 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T PRK00870 151 PTGDGPMPDAFWA-W-RAFSQYSPVLPVGRLVNGG---TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAV 225 (302)
T ss_pred CCccccchHHHhh-h-hcccccCchhhHHHHhhcc---ccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcch
Confidence 21110 000000 0 0000000000000000000 0000000000000 0000000000 000 000000 00
Q ss_pred HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE---EEEeCCCCccccccccccCcccHHHHHHHH
Q 008093 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV---LATTWHGGHLAFFEGLTAAGMWWVRAVNEY 417 (578)
Q Consensus 341 ~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~---l~~~~~GGH~~~~eg~~~~~~w~~~~v~eF 417 (578)
.... .....+.++++|+|+|+|++|+++|... . ......++.. +.+++++||+.++|. + ..+.+.+.+|
T Consensus 226 ~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~-~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~l~~f 297 (302)
T PRK00870 226 AANR--AAWAVLERWDKPFLTAFSDSDPITGGGD-A-ILQKRIPGAAGQPHPTIKGAGHFLQEDS--G--EELAEAVLEF 297 (302)
T ss_pred HHHH--HHHHhhhcCCCceEEEecCCCCcccCch-H-HHHhhcccccccceeeecCCCccchhhC--h--HHHHHHHHHH
Confidence 0000 0123568899999999999999999765 3 3455556554 789999999999883 3 3688999999
Q ss_pred HHh
Q 008093 418 LGV 420 (578)
Q Consensus 418 L~~ 420 (578)
++.
T Consensus 298 l~~ 300 (302)
T PRK00870 298 IRA 300 (302)
T ss_pred Hhc
Confidence 865
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=2.3e-21 Score=198.99 Aligned_cols=241 Identities=16% Similarity=0.145 Sum_probs=139.2
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC------CCC-CCchHHHHHHHHHHHHHCCC
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC------FYN-AGWTEDAREVIGYLHHEYPK 232 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~------~~~-~~~~~Dl~~~i~~l~~~~~~ 232 (578)
.|+|||+||+++++ ..| +.++..|.++ |+|+++|+||||.|+...+. .|+ ..+.+|+.++++.+ ..
T Consensus 29 ~~~vlllHG~~~~~-~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l----~~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNA-DHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV----VG 101 (294)
T ss_pred CCeEEEECCCCCCh-hHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh----cC
Confidence 46799999996544 455 6788888765 69999999999999765321 122 23445666666554 34
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHH-hH-HHHHhhh-----
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI-GL-QDYAQLH----- 303 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~-~l-~~~~~~~----- 303 (578)
.+++++||||||.+++.++.++|+ +|+++|+++++...... .....+.....+ ...+.. .. +.+....
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 178 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRPFIKAF-QNLLRETAVGKAFFKSVATPET 178 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhHHHHHH-HHHHhchhHHHHHHHhhcCHHH
Confidence 689999999999999999999998 89999999975421100 000001000000 000000 00 0000000
Q ss_pred -cccccc-cCCHHHHhccCCHHHHHhhhhhccCCCCCHHH---HHHhC---CcccccCCCccceEEEEeCCCCCCCCCCc
Q 008093 304 -EPRYSR-LANWEGIKKSRSIRDFDSHATCLVGKFETVDT---YYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAI 375 (578)
Q Consensus 304 -~~~l~~-~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~---yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~ 375 (578)
...+.. ..+.. ... .+....+............ +.... .....+++|++|+|+|+|++|+++|.+..
T Consensus 179 ~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 253 (294)
T PLN02824 179 VKNILCQCYHDDS----AVT-DELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELG 253 (294)
T ss_pred HHHHHHHhccChh----hcc-HHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHH
Confidence 000000 00000 000 0000111000000000111 11000 11245788999999999999999998755
Q ss_pred chHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 376 PWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 376 ~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.. .....++.++.+++++||+.++|. | ..+.+.|.+|++.
T Consensus 254 ~~-~~~~~~~~~~~~i~~~gH~~~~e~--p--~~~~~~i~~fl~~ 293 (294)
T PLN02824 254 RA-YANFDAVEDFIVLPGVGHCPQDEA--P--ELVNPLIESFVAR 293 (294)
T ss_pred HH-HHhcCCccceEEeCCCCCChhhhC--H--HHHHHHHHHHHhc
Confidence 44 455667788999999999999983 3 3599999999875
No 14
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=2.1e-21 Score=199.34 Aligned_cols=246 Identities=14% Similarity=0.089 Sum_probs=140.9
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++||+++ +...| +.++..|.+.+ +|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 27 g~~vvllHG~~~-~~~~w-~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~lvG 99 (295)
T PRK03592 27 GDPIVFLHGNPT-SSYLW-RNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG----LDDVVLVG 99 (295)
T ss_pred CCEEEEECCCCC-CHHHH-HHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCeEEEE
Confidence 467999999954 44455 78888988875 9999999999999765432222344567777766653 46899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH--------HHHHhhhccc-cccc
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL--------QDYAQLHEPR-YSRL 310 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l--------~~~~~~~~~~-l~~~ 310 (578)
|||||.+++.++..+|+ +|+++|+++++........ ..... ...+.......+ ..+....... +...
T Consensus 100 hS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (295)
T PRK03592 100 HDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMTWDD-FPPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRP 175 (295)
T ss_pred ECHHHHHHHHHHHhChh--heeEEEEECCCCCCcchhh-cchhH-HHHHHHHhCcccccccccchhhHHhhcccCccccc
Confidence 99999999999999998 8999999997432110000 00000 000110000000 0000000000 0000
Q ss_pred CCHHHHhc----cCCH---HHHHhhhhh-ccCCCC-CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh
Q 008093 311 ANWEGIKK----SRSI---RDFDSHATC-LVGKFE-TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR 381 (578)
Q Consensus 311 ~d~~~i~~----~~s~---~efd~~~~~-~~~g~~-~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~ 381 (578)
...+.+.. .... ..+...... ...++. ....... .....+.+|++|+|+|+|++|+++++.........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 253 (295)
T PRK03592 176 LSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVE--EYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRS 253 (295)
T ss_pred CCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhh--HhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHH
Confidence 00000000 0000 000000000 000000 0000000 01234678999999999999999965544333445
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
..++.++.+++++||+.++|. | ..+.+.+.+|+++..
T Consensus 254 ~~~~~~~~~i~~~gH~~~~e~--p--~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 254 WPNQLEITVFGAGLHFAQEDS--P--EEIGAAIAAWLRRLR 290 (295)
T ss_pred hhhhcceeeccCcchhhhhcC--H--HHHHHHHHHHHHHhc
Confidence 567889999999999999983 3 369999999998753
No 15
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=1.8e-21 Score=192.64 Aligned_cols=280 Identities=13% Similarity=0.078 Sum_probs=176.0
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.+.+....++.++|..+-..|+.|.. ..+.+..|+++||+++.+...| +.++..|+..||.|+++|
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~-------------~~~pr~lv~~~HG~g~~~s~~~-~~~a~~l~~~g~~v~a~D 89 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLS-------------GTEPRGLVFLCHGYGEHSSWRY-QSTAKRLAKSGFAVYAID 89 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCC-------------CCCCceEEEEEcCCcccchhhH-HHHHHHHHhCCCeEEEee
Confidence 45667778899999888555554422 1256678999999966554455 889999999999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHH--HCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 197 HRGLGGVSITSDCFYN-AGWTEDAREVIGYLHH--EYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~--~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
++|||+|++....... ....+|+...++.++. .++..+.+++||||||.++++++.++|. ..+|+|++++-....
T Consensus 90 ~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 90 YEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKIS 167 (313)
T ss_pred ccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccC
Confidence 9999999876544333 2335788888887554 4577899999999999999999999887 789999998765443
Q ss_pred hhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC---CCHHHHHHhCCc-c
Q 008093 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTYYRNCSS-S 349 (578)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~---~~~~~yy~~~s~-~ 349 (578)
..... .+....+ ...+...+..++ ..+.....+...+....+.....--....+. ++..+..+.+.- .
T Consensus 168 ~~~kp--~p~v~~~-----l~~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le 239 (313)
T KOG1455|consen 168 EDTKP--HPPVISI-----LTLLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLE 239 (313)
T ss_pred CccCC--CcHHHHH-----HHHHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHH
Confidence 22110 0111111 111112221111 1111000000111111111100000001222 233344443322 2
Q ss_pred cccCCCccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 350 TYVGNVSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 350 ~~l~~I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
..+.++++|.|++||++|.++.++.... .+...+.+.++.++|+.-|..+.....++...+...|.+||++
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 5788999999999999999999886543 4566788899999999999887622223334566788888875
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.86 E-value=6.8e-21 Score=193.54 Aligned_cols=239 Identities=11% Similarity=0.056 Sum_probs=136.0
Q ss_pred CcEEEEECCCCCCCccHHH--HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC-CCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 160 TPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF-YNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi--~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.|+||++||++++.. .|- ...+..+.+.||+|+++|+||||.|+...... ......+|+.++++.+ +..+++
T Consensus 30 ~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 467999999954433 231 12345666789999999999999997542211 1112356666666654 445899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHH---HHHhHHHHHhhhcccccc-cCC
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSR-LAN 312 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~---l~~~l~~~~~~~~~~l~~-~~d 312 (578)
++||||||.+++.++.++|+ +++++|+++++..................+... ....+........ +.. ..+
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 180 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL--FDQSLIT 180 (282)
T ss_pred EEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc--cCcccCc
Confidence 99999999999999999988 899999998753211000000000000010000 0000111110000 000 000
Q ss_pred HHHHh-----ccCCHHHHHhhhhhc-cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 313 WEGIK-----KSRSIRDFDSHATCL-VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 313 ~~~i~-----~~~s~~efd~~~~~~-~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
..... .......+....... ...+. .......+++|++|+|+++|++|++++.+.... .....++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~-~~~~~~~~ 252 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLS-------TWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLK-LLWNMPDA 252 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccc-------cchHHHHHhhCCCCEEEEEccCCCcCCchhHHH-HHHhCCCC
Confidence 00000 000000000000000 00000 001123577899999999999999999875544 45667899
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++++++++||+.+.|. +..+.+.|.+||+
T Consensus 253 ~~~~i~~agH~~~~e~----p~~~~~~i~~fl~ 281 (282)
T TIGR03343 253 QLHVFSRCGHWAQWEH----ADAFNRLVIDFLR 281 (282)
T ss_pred EEEEeCCCCcCCcccC----HHHHHHHHHHHhh
Confidence 9999999999999983 3358899999986
No 17
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.86 E-value=6.6e-21 Score=199.42 Aligned_cols=272 Identities=17% Similarity=0.148 Sum_probs=155.8
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH------------------------HH
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI------------------------RH 180 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi------------------------~~ 180 (578)
+...||..|....+.+. +.+.+|+++||+++.+...|+ ..
T Consensus 2 ~~~~~g~~l~~~~~~~~----------------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK----------------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred ccCCCCCeEEEeeeecc----------------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 45678888865544431 356799999999776654554 35
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCC-CCCCCC---chHHHHHHHHHHHH-------------------HCC-CCcEE
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYNAG---WTEDAREVIGYLHH-------------------EYP-KAPLF 236 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~~~---~~~Dl~~~i~~l~~-------------------~~~-~~~i~ 236 (578)
+++.|.++||+|+++|+||||.|..... ..+..+ ..+|+.++++.+++ .++ +.|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 7899999999999999999999875422 222122 34688888887765 355 67999
Q ss_pred EEEEchHHHHHHHHHhhcCCC------CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccccc
Q 008093 237 AIGTSIGANILVKYLGEEGEK------TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~------~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~ 310 (578)
++||||||++++.++.+.+.. ..++|+|++++++.+.......... ....... +...+..........-...
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~-~~~~~~~-l~~~~~~~~p~~~~~~~~~ 223 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFK-FKYFYLP-VMNFMSRVFPTFRISKKIR 223 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcch-hhhhHHH-HHHHHHHHCCcccccCccc
Confidence 999999999999998765431 2589999999887542210000000 0000000 1111111111000000000
Q ss_pred CCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC-cccccCCC--ccceEEEEeCCCCCCCCCCcchHH-HhcCCCE
Q 008093 311 ANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS-SSTYVGNV--SIPLLCISSLDDPVCTVEAIPWDE-CRANKNV 386 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s-~~~~l~~I--~vPvLiI~g~dDpivp~~~~~~~~-~~~~~~~ 386 (578)
..++.. .....+.|..............+++.... ....+.++ ++|+|+++|++|++++.+...... ....+++
T Consensus 224 ~~~~~~--~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~ 301 (332)
T TIGR01607 224 YEKSPY--VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNK 301 (332)
T ss_pred cccChh--hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCc
Confidence 000000 00001111111000000111122222111 11234555 799999999999999987554322 2334678
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+.++++++|..+.| ++...+.+.+.+||+
T Consensus 302 ~l~~~~g~~H~i~~E---~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 302 ELHTLEDMDHVITIE---PGNEEVLKKIIEWIS 331 (332)
T ss_pred EEEEECCCCCCCccC---CCHHHHHHHHHHHhh
Confidence 999999999999998 334457788888875
No 18
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=3.4e-21 Score=188.91 Aligned_cols=232 Identities=11% Similarity=0.149 Sum_probs=133.5
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++||+++ +...| +.++..|.+ +|+|+++|+||||.|+.... .++.++++.+.... ..+++++|
T Consensus 4 ~~~iv~~HG~~~-~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGWGM-NAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCCCC-chhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 467999999954 55555 778888764 79999999999999864321 12334444444333 35899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHH---HhhHHHHHHHHHH---HHHhHHHHHhhhcccccccCCH
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF---IGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~---l~~~~~~~~~~~~---l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
|||||.+++.++.++|+ .+.++|++++.........+ ........+.... ....+..+.... .+......
T Consensus 72 ~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 147 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ--TLGTPTAR 147 (245)
T ss_pred EcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH--HhcCCccc
Confidence 99999999999999988 89999998764322110000 0000001110000 000001110000 00000000
Q ss_pred HHHhccCCHHHHHhhhhhc-cCCCCCHHH---HHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 314 EGIKKSRSIRDFDSHATCL-VGKFETVDT---YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~-~~g~~~~~~---yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
. ....+...+... ......... .+...+....+.+|++|+|+++|++|+++|.+.... ..+..+++++.
T Consensus 148 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~ 220 (245)
T TIGR01738 148 Q------DARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY-LDKLAPHSELY 220 (245)
T ss_pred h------HHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH-HHHhCCCCeEE
Confidence 0 000111110000 000011111 111222234678999999999999999999875443 45567899999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHH
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
+++++||+.++|. + ..+.+.|.+|+
T Consensus 221 ~~~~~gH~~~~e~--p--~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLSH--A--EAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCccccC--H--HHHHHHHHhhC
Confidence 9999999999983 3 35888888885
No 19
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=3.5e-21 Score=181.92 Aligned_cols=225 Identities=14% Similarity=0.162 Sum_probs=154.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
-.|+++||++|++.+ ++.+++.|.++||.|.++++||||..+-.--......|.+|+.+..+++... +...|.++|.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 569999999998887 7999999999999999999999998642212222346888999999999844 3457999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
||||.++++++...| ++++|.+|+|.........+.. +... ..+.+.+.. +
T Consensus 93 SmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~-----~l~y--~~~~kk~e~------------------k 143 (243)
T COG1647 93 SMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEG-----LLEY--FRNAKKYEG------------------K 143 (243)
T ss_pred cchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHH-----HHHH--HHHhhhccC------------------C
Confidence 999999999998874 6799999999876543222211 1110 011111111 1
Q ss_pred CHHHHHhhhhhccC-CCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCcc
Q 008093 321 SIRDFDSHATCLVG-KFETVDTYYRNC-SSSTYVGNVSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 321 s~~efd~~~~~~~~-g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~ 397 (578)
+..++++....-.. -..+..+++... ...+.+..|..|+++++|.+|+++|.+.... .........++..+++.||+
T Consensus 144 ~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 144 DQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred CHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 11111111110000 011122222211 2346788999999999999999999986543 34556778899999999999
Q ss_pred ccccccccCcccHHHHHHHHHHh
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.-.+ .++..+.+.|.+||+.
T Consensus 224 It~D---~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 224 ITLD---KERDQVEEDVITFLEK 243 (243)
T ss_pred eecc---hhHHHHHHHHHHHhhC
Confidence 9877 4566789999999863
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.86 E-value=1.5e-20 Score=186.42 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=137.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
+++|+||++||++++ ...| ..++..+. +||+|+++|+||||.|....+..+. ..+.+|+.++++++ ...+++
T Consensus 11 ~~~~~iv~lhG~~~~-~~~~-~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGS-GSYW-APQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcc-hhHH-HHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEE
Confidence 457889999999654 4444 56666665 5899999999999999754333232 23335555555544 345899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
++||||||.+++.+++.+++ .++++|++++............... ..+.... ....+... ...+. .....+
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-~~~~~--~~~~~~ 154 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVR-IALLQHA---GPEAYVHA-QALFL--YPADWI 154 (257)
T ss_pred EEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHH-HHHHhcc---Ccchhhhh-hhhhh--ccccHh
Confidence 99999999999999999887 7999999886443321111000000 0000000 00000000 00000 000000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHH------HHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDT------YYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~------yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
.... ....+........+..... .....+....++++++|+|+++|++|+++|.+.... .....++..+..
T Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~ 231 (257)
T TIGR03611 155 SENA--ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLR-LAAALPNAQLKL 231 (257)
T ss_pred hccc--hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHH-HHHhcCCceEEE
Confidence 0000 0000000000011111111 112223335678899999999999999999875443 445567889999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHH
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++++||..+++. +..+.+.+.+||+
T Consensus 232 ~~~~gH~~~~~~----~~~~~~~i~~fl~ 256 (257)
T TIGR03611 232 LPYGGHASNVTD----PETFNRALLDFLK 256 (257)
T ss_pred ECCCCCCccccC----HHHHHHHHHHHhc
Confidence 999999988873 3358889999986
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.86 E-value=7e-21 Score=187.07 Aligned_cols=238 Identities=13% Similarity=0.163 Sum_probs=137.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.+|+||++||++ ++...| +.++..+. .||+|+++|+||||.|+..........+.+|+.++++. .+..+++++
T Consensus 12 ~~~~li~~hg~~-~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~----~~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLG-TDLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH----LGIERAVFC 84 (251)
T ss_pred CCCeEEEEcCcc-cchhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCceEEE
Confidence 568999999994 455555 66777765 68999999999999986543221112333455444443 345689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhh-hcccccccCCHHHHh
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQL-HEPRYSRLANWEGIK 317 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~-~~~~l~~~~d~~~i~ 317 (578)
||||||.+++.+|.++|+ .++++|+++++........+... ........+.......... ....+.. ...
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 155 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNAR--IAAVRAEGLAALADAVLERWFTPGFRE-AHP---- 155 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHH--HhhhhhccHHHHHHHHHHHHccccccc-CCh----
Confidence 999999999999999887 79999988865432211111000 0000000000000000000 0000000 000
Q ss_pred ccCCHHHHHhhhhh-ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 318 KSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 318 ~~~s~~efd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
.....+.+.... ...++......+........+.++++|+++++|++|+++|.+.... .....++.++.+++++||
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH 232 (251)
T TIGR02427 156 --ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVRE-IADLVPGARFAEIRGAGH 232 (251)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHH-HHHhCCCceEEEECCCCC
Confidence 000011111100 0111111122222233345678899999999999999999875443 445567889999999999
Q ss_pred cccccccccCcccHHHHHHHHHH
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+.+++. + ..+.+.+.+|+.
T Consensus 233 ~~~~~~--p--~~~~~~i~~fl~ 251 (251)
T TIGR02427 233 IPCVEQ--P--EAFNAALRDFLR 251 (251)
T ss_pred cccccC--h--HHHHHHHHHHhC
Confidence 999883 3 357888888863
No 22
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=6.2e-20 Score=194.25 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=138.0
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..|+|||+||+++ +...| ..++..|.+ +|+|+++|+||||.|+......|+ ..+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~-~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGA-SIPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 4578999999965 44455 677777765 899999999999999764322222 23445666655543 3468999
Q ss_pred EEEchHHHHHHHHHhh-cCCCCCccEEEEEcCCcchhhh---hHHHhhHH--HHHHHHHH-----HHHhH-H-----HHH
Q 008093 238 IGTSIGANILVKYLGE-EGEKTPVAGAAAICSPWDLLIG---DRFIGRRL--IQKIYDRA-----LTIGL-Q-----DYA 300 (578)
Q Consensus 238 vGhSmGG~ial~ya~~-~p~~~~V~~~Vlis~p~d~~~~---~~~l~~~~--~~~~~~~~-----l~~~l-~-----~~~ 300 (578)
+||||||.+++.++.. +|+ +|+++|+++++...... ........ ....+... +...+ . ...
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 9999999999988874 577 89999999875321100 00000000 00000000 00000 0 000
Q ss_pred hh-hcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCC
Q 008093 301 QL-HEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVE 373 (578)
Q Consensus 301 ~~-~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~ 373 (578)
+. ....+.. .. ....++.+.+............+... ......+.+|++|+|+|+|++|+++|.+
T Consensus 238 ~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~ 309 (360)
T PLN02679 238 KNILLSVYGN---KE-----AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLD 309 (360)
T ss_pred HHHHHHhccC---cc-----cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCch
Confidence 00 0000000 00 00001111110000000111111111 1112457789999999999999999986
Q ss_pred Cc--c--hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 374 AI--P--WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 374 ~~--~--~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.. . ....+..++.++.+++++||+.+.|. | ..+.+.|.+||+++
T Consensus 310 ~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~--P--e~~~~~I~~FL~~~ 357 (360)
T PLN02679 310 GPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR--P--DLVHEKLLPWLAQL 357 (360)
T ss_pred hhHHHHHHhhhccCCceEEEEcCCCCCCccccC--H--HHHHHHHHHHHHhc
Confidence 31 1 12344568899999999999999983 3 35999999999875
No 23
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=5.9e-20 Score=186.52 Aligned_cols=249 Identities=14% Similarity=0.079 Sum_probs=158.1
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
..+.+.+.||.++...|..|.+. ...+.++||++||+++ ....| ..+++.|+++||+|+.+|+|||
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~------------~~~~~~~vIi~HGf~~-~~~~~-~~~A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN------------SPKKNNTILIASGFAR-RMDHF-AGLAEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc------------CCCCCCEEEEeCCCCC-ChHHH-HHHHHHHHHCCCEEEEecCCCC
Confidence 55778899999999777665321 1346689999999976 44444 8899999999999999999998
Q ss_pred -CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 -G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|++.-..........|+.++++|++.+. ..+++++||||||.+++..|++. +++++|+.||..++... +
T Consensus 76 ~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~---l 147 (307)
T PRK13604 76 VGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDT---L 147 (307)
T ss_pred CCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHH---H
Confidence 888765332322334689999999998864 56899999999999986665532 48889998887765421 1
Q ss_pred hhHHHHHHHHHHHHHhHHHHHhhhccc--ccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCcc
Q 008093 280 GRRLIQKIYDRALTIGLQDYAQLHEPR--YSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSI 357 (578)
Q Consensus 280 ~~~~~~~~~~~~l~~~l~~~~~~~~~~--l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~v 357 (578)
.+ .++.... ..+. ++...+.... .-....|..... ..++ +...++.+.++++++
T Consensus 148 ~~-------------~~~~~~~-~~p~~~lp~~~d~~g~--~l~~~~f~~~~~--~~~~------~~~~s~i~~~~~l~~ 203 (307)
T PRK13604 148 ER-------------ALGYDYL-SLPIDELPEDLDFEGH--NLGSEVFVTDCF--KHGW------DTLDSTINKMKGLDI 203 (307)
T ss_pred HH-------------hhhcccc-cCcccccccccccccc--cccHHHHHHHHH--hcCc------cccccHHHHHhhcCC
Confidence 10 0000000 0000 0000000000 000011111000 0000 112334466778899
Q ss_pred ceEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 358 PLLCISSLDDPVCTVEAIPWDEC-RANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 358 PvLiI~g~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
|+|+|||.+|.+||.+....... ..+.+..+..+++++|.- .|. ...+..|.+.+...
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l-~~~--------~~~~~~~~~~~~~~ 262 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL-GEN--------LVVLRNFYQSVTKA 262 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc-Ccc--------hHHHHHHHHHHHHH
Confidence 99999999999999986644333 334689999999999953 331 24667788877543
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.85 E-value=5.7e-20 Score=185.47 Aligned_cols=246 Identities=16% Similarity=0.134 Sum_probs=136.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+.|+||++||+++ +...| +.++..|.+ +|+|+++|+||||.|.......++ ..+.+|+.++++. .+..++++
T Consensus 27 ~~~~vv~~hG~~~-~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~----~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGA-STHSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA----EGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCC-CHHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH----cCCCCceE
Confidence 4578999999955 44455 677777765 799999999999998754332222 2333455554443 34468999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH-HHHHHhHHHHHhhhcccccccCC-HHH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD-RALTIGLQDYAQLHEPRYSRLAN-WEG 315 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~-~~l~~~l~~~~~~~~~~l~~~~d-~~~ 315 (578)
+||||||.+++.++..+++ +++++|++++.................+... ..+...+................ ...
T Consensus 100 vG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGS 177 (278)
T ss_pred EEECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcccc
Confidence 9999999999999999887 7999999987654221100000000000000 00000000000000000000000 000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhC---CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.........+..... ....+....++.... .....+++|++|+|+|+|++|.++|.+.... .....++.++..++
T Consensus 178 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~-~~~~~~~~~~~~~~ 255 (278)
T TIGR03056 178 LLDKAGMTYYGRLIR-SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR-AATRVPTATLHVVP 255 (278)
T ss_pred ccccchhhHHHHhhc-CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH-HHHhccCCeEEEEC
Confidence 000000000000000 000001111111110 1123577899999999999999999875443 45667889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHH
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++||+.+.|. + ..+.+.|.+|++
T Consensus 256 ~~gH~~~~e~--p--~~~~~~i~~f~~ 278 (278)
T TIGR03056 256 GGGHLVHEEQ--A--DGVVGLILQAAE 278 (278)
T ss_pred CCCCcccccC--H--HHHHHHHHHHhC
Confidence 9999999883 3 358899999874
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.84 E-value=1.6e-20 Score=183.90 Aligned_cols=239 Identities=16% Similarity=0.231 Sum_probs=136.6
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|+||++||++++ ...| +.++..|. +||+|+++|+||||.|+.... ....++.+.+.+++..+.+..+..+++++||
T Consensus 2 ~~vv~~hG~~~~-~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 77 (251)
T TIGR03695 2 PVLVFLHGFLGS-GADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVGY 77 (251)
T ss_pred CEEEEEcCCCCc-hhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 679999999654 4445 78888887 799999999999999965421 1122222333333566666667779999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH-HhHHHHHhhhc--cccccc--CCHHH
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT-IGLQDYAQLHE--PRYSRL--ANWEG 315 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~-~~l~~~~~~~~--~~l~~~--~d~~~ 315 (578)
||||.+++.++..+|+ .|.+++++++............+......+...+. .....+..... ..+... .+..
T Consensus 78 S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (251)
T TIGR03695 78 SMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE- 154 (251)
T ss_pred ccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH-
Confidence 9999999999999988 79999999875433221111000000000000000 00111111000 000000 0000
Q ss_pred HhccCCHHHHHhhhhhccCCCCCHHHHHHhC------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 316 IKKSRSIRDFDSHATCLVGKFETVDTYYRNC------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 316 i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
....+..... .........++... .....+.++++|+|+++|++|+.++. .. .......++.++.
T Consensus 155 -----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~-~~~~~~~~~~~~~ 225 (251)
T TIGR03695 155 -----QRQALRAKRL--ANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQ-IA-KEMQKLLPNLTLV 225 (251)
T ss_pred -----HhHHHHHhcc--cccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHH-HH-HHHHhcCCCCcEE
Confidence 0000000000 00001111111111 12234678999999999999987642 22 2345567889999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+++++||+.++|. ++ .+.+.+.+||+
T Consensus 226 ~~~~~gH~~~~e~--~~--~~~~~i~~~l~ 251 (251)
T TIGR03695 226 IIANAGHNIHLEN--PE--AFAKILLAFLE 251 (251)
T ss_pred EEcCCCCCcCccC--hH--HHHHHHHHHhC
Confidence 9999999999984 33 47888888873
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.84 E-value=2.7e-20 Score=186.89 Aligned_cols=232 Identities=11% Similarity=0.090 Sum_probs=133.8
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|.|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+... .+ . .+++.+ .+.+ ....+++++||
T Consensus 14 ~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~--~-~~~~~~---~l~~-~~~~~~~lvGh 81 (256)
T PRK10349 14 VHLVLLHGWGL-NAEVW-RCIDEELSS-HFTLHLVDLPGFGRSRGFG--AL--S-LADMAE---AVLQ-QAPDKAIWLGW 81 (256)
T ss_pred CeEEEECCCCC-ChhHH-HHHHHHHhc-CCEEEEecCCCCCCCCCCC--CC--C-HHHHHH---HHHh-cCCCCeEEEEE
Confidence 46999999954 44455 678888865 5999999999999987432 11 1 233332 3322 23468999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH--HHhhHHHHHHHHHH---HHHhHHHHHhhhcccccccCCHHH
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR--FIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSRLANWEG 315 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~--~l~~~~~~~~~~~~---l~~~l~~~~~~~~~~l~~~~d~~~ 315 (578)
||||.+++.+|.++|+ +|+++|+++++........ .........+.... +...+..+..... +.. ....
T Consensus 82 S~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~- 155 (256)
T PRK10349 82 SLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGT-ETAR- 155 (256)
T ss_pred CHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccC-chHH-
Confidence 9999999999999888 8999999986422111000 00000001111100 0001111110000 000 0000
Q ss_pred HhccCCHHHHHhhhhh-ccCCCCC---HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 316 IKKSRSIRDFDSHATC-LVGKFET---VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 316 i~~~~s~~efd~~~~~-~~~g~~~---~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
....++...... ....... ....+...+....+.++++|+|+|+|++|+++|.+... ......++.++.++
T Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~i~~~~~~~i 230 (256)
T PRK10349 156 ----QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP-MLDKLWPHSESYIF 230 (256)
T ss_pred ----HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH-HHHHhCCCCeEEEe
Confidence 000011111100 0000001 11222333445678899999999999999999876543 34566789999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHH
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+++||+.++|. | ..+.+.+.+|-.
T Consensus 231 ~~~gH~~~~e~--p--~~f~~~l~~~~~ 254 (256)
T PRK10349 231 AKAAHAPFISH--P--AEFCHLLVALKQ 254 (256)
T ss_pred CCCCCCccccC--H--HHHHHHHHHHhc
Confidence 99999999983 3 358888888844
No 27
>PLN02872 triacylglycerol lipase
Probab=99.84 E-value=2e-20 Score=199.01 Aligned_cols=307 Identities=17% Similarity=0.156 Sum_probs=177.0
Q ss_pred chhHHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH---
Q 008093 101 SPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY--- 177 (578)
Q Consensus 101 ~ghlQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y--- 177 (578)
..-+||++..++.+. ..+.+++.++++||..+.+.|..+.... .....+|+|+++||+.+++..+.
T Consensus 26 ~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~----------~~~~~~~~Vll~HGl~~ss~~w~~~~ 94 (395)
T PLN02872 26 RSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPR----------LGSQRGPPVLLQHGLFMAGDAWFLNS 94 (395)
T ss_pred CCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCC----------CCCCCCCeEEEeCcccccccceeecC
Confidence 345899988777654 6788999999999999999998542210 11234688999999966554422
Q ss_pred -HHHHHHHHHhCCceEEEEeCCCCCCCCC----C--CCCCCCCCc----hHHHHHHHHHHHHHCCCCcEEEEEEchHHHH
Q 008093 178 -IRHLVFNTAKRGWNVVVSNHRGLGGVSI----T--SDCFYNAGW----TEDAREVIGYLHHEYPKAPLFAIGTSIGANI 246 (578)
Q Consensus 178 -i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~----~--~~~~~~~~~----~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~i 246 (578)
.+.++..|+++||+|+++|.||++.+.. . ...++...+ ..|+.++++++.+..+ .+++++||||||.+
T Consensus 95 ~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~ 173 (395)
T PLN02872 95 PEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIM 173 (395)
T ss_pred cccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHH
Confidence 1456778899999999999999876532 1 122222222 2699999999976543 68999999999999
Q ss_pred HHHHHhhcCC-CCCccEEEEEcCCcchhhhhHHHhhHH----HHHHH---------------HHHHHHhHHHHHhhhccc
Q 008093 247 LVKYLGEEGE-KTPVAGAAAICSPWDLLIGDRFIGRRL----IQKIY---------------DRALTIGLQDYAQLHEPR 306 (578)
Q Consensus 247 al~ya~~~p~-~~~V~~~Vlis~p~d~~~~~~~l~~~~----~~~~~---------------~~~l~~~l~~~~~~~~~~ 306 (578)
++.++ .+|+ ...|+++++++|..........+.... ...++ .. +...+..........
T Consensus 174 ~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~C~~~~~c~~~ 251 (395)
T PLN02872 174 SLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVK-LLDSICEGHMDCNDL 251 (395)
T ss_pred HHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHH-HHHHHccCchhHHHH
Confidence 98666 3443 125778888877543211111110000 00000 00 000000000000000
Q ss_pred ---ccc---cCCHHHH-------hccCCHH---HHHhhhhhc---cCCCC---CHHHHHHhCCcccccCCC--ccceEEE
Q 008093 307 ---YSR---LANWEGI-------KKSRSIR---DFDSHATCL---VGKFE---TVDTYYRNCSSSTYVGNV--SIPLLCI 362 (578)
Q Consensus 307 ---l~~---~~d~~~i-------~~~~s~~---efd~~~~~~---~~g~~---~~~~yy~~~s~~~~l~~I--~vPvLiI 362 (578)
+.. ..+...+ ....+.+ .|.+.+... .+.|. +...|-+...+...+.+| ++|++++
T Consensus 252 ~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~ 331 (395)
T PLN02872 252 LTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMG 331 (395)
T ss_pred HHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEE
Confidence 000 0000000 0111222 222222111 12222 222333334455678888 6899999
Q ss_pred EeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 363 SSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 363 ~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+|++|.+++++..............+..+++.||+.|+-+. ..+..+.+.|.+|+++..
T Consensus 332 ~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~-eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 332 YGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLST-SAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCc-chHHHHHHHHHHHHHHhh
Confidence 99999999987665433333333678889999999776321 123358899999998654
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=2e-19 Score=181.00 Aligned_cols=246 Identities=12% Similarity=0.152 Sum_probs=132.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC--CCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF--YNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
+|+||++||+.|++.. |...+...+.+.||+|+++|+||||.|....... ++ .+++.+.+..+.+.....++++
T Consensus 25 ~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 100 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWT---IDYFVDELEEVREKLGLDKFYL 100 (288)
T ss_pred CCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccccccc---HHHHHHHHHHHHHHcCCCcEEE
Confidence 5779999998776654 4366766776679999999999999987542211 22 2333333333444444567999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhh---cccccccC-CH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLH---EPRYSRLA-NW 313 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~---~~~l~~~~-d~ 313 (578)
+||||||.+++.++..+|+ ++.++|++++............... ..+.......+....... .+...... ..
T Consensus 101 iG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKELNRLR--KELPPEVRAAIKRCEASGDYDNPEYQEAVEVF 176 (288)
T ss_pred EEeehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHHHHHH--hhcChhHHHHHHHHHhccCcchHHHHHHHHHH
Confidence 9999999999999999988 8999998876433221111000000 000000000000000000 00000000 00
Q ss_pred H--HHhccC----CHHHHHhh----hhhccCCCCC--HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh
Q 008093 314 E--GIKKSR----SIRDFDSH----ATCLVGKFET--VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECR 381 (578)
Q Consensus 314 ~--~i~~~~----s~~efd~~----~~~~~~g~~~--~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~ 381 (578)
. ...... ....+... +.....+-.. ....+........+.++++|+|+++|++|++. ++... ....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~-~~~~~-~~~~ 254 (288)
T TIGR01250 177 YHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTMT-PEAAR-EMQE 254 (288)
T ss_pred HHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCccC-HHHHH-HHHH
Confidence 0 000000 00000000 0000000000 00001111223456789999999999999864 44333 2445
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
..++.++.+++++||+.++|. +..+.+.|.+||+
T Consensus 255 ~~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIAGSRLVVFPDGSHMTMIED----PEVYFKLLSDFIR 288 (288)
T ss_pred hccCCeEEEeCCCCCCcccCC----HHHHHHHHHHHhC
Confidence 567888999999999999983 3358889988874
No 29
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.84 E-value=4.6e-20 Score=184.44 Aligned_cols=234 Identities=14% Similarity=0.089 Sum_probs=140.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.++|+||++||++++. ..| ..++..|. .+|+|+++|+||||.|..... .....+.+|+.++++++ +..++++
T Consensus 14 ~~~~~iv~lhG~~~~~-~~~-~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL-DNL-GVLARDLV-NDHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKATF 85 (255)
T ss_pred CCCCCEEEECCCCCch-hHH-HHHHHHHh-hCCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceEE
Confidence 4678899999996654 445 66777775 479999999999999875422 22234557777777665 3457999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcC-CcchhhhhHHHhhHHHHHHHHHHHHHhH---HHHHhhhcccccccCCH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICS-PWDLLIGDRFIGRRLIQKIYDRALTIGL---QDYAQLHEPRYSRLANW 313 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~-p~d~~~~~~~l~~~~~~~~~~~~l~~~l---~~~~~~~~~~l~~~~d~ 313 (578)
+||||||.+++.++..+++ +|+++|++++ |.+..... . ...... ......... ..........+ .
T Consensus 86 vGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~- 154 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRR--H-DEIFAA-INAVSEAGATTRQQAAAIMRQHL----N- 154 (255)
T ss_pred EEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchh--h-HHHHHH-HHHhhhcccccHHHHHHHHHHhc----C-
Confidence 9999999999999999988 8999999874 32211000 0 000000 000000000 00000000000 0
Q ss_pred HHHhccCCHHHHHh-hhhhcc--CCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 314 EGIKKSRSIRDFDS-HATCLV--GKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 314 ~~i~~~~s~~efd~-~~~~~~--~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
......+.. .+.... .........+........+.++++|+|+|+|++|++++.+.... ..+..++.++.+
T Consensus 155 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~ 228 (255)
T PRK10673 155 -----EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDD-LLAQFPQARAHV 228 (255)
T ss_pred -----CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHH-HHHhCCCcEEEE
Confidence 000000000 000000 00001111223333345677889999999999999998765443 456678999999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++++||+.++|. +..+.+.+.+||++
T Consensus 229 ~~~~gH~~~~~~----p~~~~~~l~~fl~~ 254 (255)
T PRK10673 229 IAGAGHWVHAEK----PDAVLRAIRRYLND 254 (255)
T ss_pred eCCCCCeeeccC----HHHHHHHHHHHHhc
Confidence 999999998873 34688999999874
No 30
>PLN02965 Probable pheophorbidase
Probab=99.84 E-value=2.5e-20 Score=187.44 Aligned_cols=240 Identities=12% Similarity=0.078 Sum_probs=137.8
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
.|||+||+++ +...| +.++..|.+.||+|+++|+||||.|+......+. ....+|+.++++.+. ...+++++||
T Consensus 5 ~vvllHG~~~-~~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASH-GAWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGH 79 (255)
T ss_pred EEEEECCCCC-CcCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEec
Confidence 3899999965 44445 6788888888999999999999999754332222 233456666665542 1248999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHH-hhhcc-cccc-cCCHHHH-
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYA-QLHEP-RYSR-LANWEGI- 316 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~-~~~~~-~l~~-~~d~~~i- 316 (578)
||||.+++.++.++|+ +|+++|++++........ .. .......... ..+.... ..... .... .......
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~-~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSI-IS-PRLKNVMEGT---EKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCC-cc-HHHHhhhhcc---ccceeeeeccCCCCCcchhhcCHHHHH
Confidence 9999999999999988 899999998742110000 00 0000000000 0000000 00000 0000 0000000
Q ss_pred ---hccCCHHHHHhhhhh-ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 317 ---KKSRSIRDFDSHATC-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 317 ---~~~~s~~efd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.......+....... ........... ......+.++++|+|+|+|++|.++|++... ...+..++.++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~-~~~~~~~~a~~~~i~ 228 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQD-VMVENWPPAQTYVLE 228 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHH-HHHHhCCcceEEEec
Confidence 000000000000000 00001111111 0112245679999999999999999986544 356778889999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHHhh
Q 008093 393 HGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 393 ~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++||+.++|. |+ .+.+.+.+|++.+
T Consensus 229 ~~GH~~~~e~--p~--~v~~~l~~~~~~~ 253 (255)
T PLN02965 229 DSDHSAFFSV--PT--TLFQYLLQAVSSL 253 (255)
T ss_pred CCCCchhhcC--HH--HHHHHHHHHHHHh
Confidence 9999999993 33 5899999998865
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.84 E-value=3.6e-20 Score=183.89 Aligned_cols=231 Identities=13% Similarity=0.128 Sum_probs=129.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+||++||+++++ ..| +.++..+ .+|+|+++|+||||.|...... ......+|+.++++ ..+..+++++|
T Consensus 2 ~p~vvllHG~~~~~-~~w-~~~~~~l--~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~----~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDW-QPVGEAL--PDYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQ----SYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCCCh-HHH-HHHHHHc--CCCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHH----HcCCCCeEEEE
Confidence 47799999996644 456 6777777 3799999999999999754321 11122344444444 34567999999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHH-HhHHHHHhhh--cccccccCCHHHH
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALT-IGLQDYAQLH--EPRYSRLANWEGI 316 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~-~~l~~~~~~~--~~~l~~~~d~~~i 316 (578)
|||||.+++.++.++++. .|+++++++++...........+......+...+. ..+....... .+.+.. ...
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 147 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNA--- 147 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCc---
Confidence 999999999999998652 49999988766433221111100000000000000 0000000000 000000 000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
.....+..... ...+ .....++.. ......+.++++|+++|+|++|+.+. . ... ..+.++.+
T Consensus 148 ---~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~-~~~-~~~~~~~~ 215 (242)
T PRK11126 148 ---EQRQQLVAKRS-NNNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----A-LAQ-QLALPLHV 215 (242)
T ss_pred ---cHHHHHHHhcc-cCCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----H-HHH-HhcCeEEE
Confidence 00000000000 0000 011112111 11224678899999999999998652 1 122 23789999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 391 TWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 391 ~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
++++||+.++|. +..+.+.|.+|++.
T Consensus 216 i~~~gH~~~~e~----p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHREN----PAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhhC----hHHHHHHHHHHHhh
Confidence 999999999983 34689999999875
No 32
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.84 E-value=1.2e-19 Score=196.65 Aligned_cols=252 Identities=13% Similarity=0.158 Sum_probs=135.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHH---hCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHH-HHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTA---KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVI-GYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~---~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i-~~l~~~~~~~ 233 (578)
+.+|+|||+||++++. ..|-..+...+. +.+|+|+++|+||||.|+......|. .++..+.+ ..+.+..+..
T Consensus 199 ~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt---l~~~a~~l~~~ll~~lg~~ 274 (481)
T PLN03087 199 KAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT---LREHLEMIERSVLERYKVK 274 (481)
T ss_pred CCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC---HHHHHHHHHHHHHHHcCCC
Confidence 3457899999996544 444223334444 47999999999999999754333332 22333333 2344455667
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHH-----HHHH-HHHhHHHHHhhhcccc
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKI-----YDRA-LTIGLQDYAQLHEPRY 307 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~-----~~~~-l~~~l~~~~~~~~~~l 307 (578)
+++++||||||.+++.++..+|+ +|+++|+++++.................. +... +...............
T Consensus 275 k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 352 (481)
T PLN03087 275 SFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTI 352 (481)
T ss_pred CEEEEEECHHHHHHHHHHHhChH--hccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhh
Confidence 99999999999999999999998 89999999986543221100000000000 0000 0000000000000000
Q ss_pred c----c-cCCHHHH---hccCCHHHH-Hhhhhhcc--CCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCC
Q 008093 308 S----R-LANWEGI---KKSRSIRDF-DSHATCLV--GKFETVDTYYRN------CSSSTYVGNVSIPLLCISSLDDPVC 370 (578)
Q Consensus 308 ~----~-~~d~~~i---~~~~s~~ef-d~~~~~~~--~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~g~dDpiv 370 (578)
. . ...++.+ .....+..+ .+.+.... ..+.....+... ......+.+|++|+|+|+|++|+++
T Consensus 353 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~iv 432 (481)
T PLN03087 353 CLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELI 432 (481)
T ss_pred hcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCC
Confidence 0 0 0000000 000000000 00000000 000000000000 0001123478999999999999999
Q ss_pred CCCCcchHHHhcCCCEEEEEeCCCCccccc-cccccCcccHHHHHHHHHHh
Q 008093 371 TVEAIPWDECRANKNVVLATTWHGGHLAFF-EGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 371 p~~~~~~~~~~~~~~~~l~~~~~GGH~~~~-eg~~~~~~w~~~~v~eFL~~ 420 (578)
|.+.... .....+++++.+++++||+.++ | ++..+.+.+.+|.+.
T Consensus 433 P~~~~~~-la~~iP~a~l~vI~~aGH~~~v~e----~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 433 PVECSYA-VKAKVPRARVKVIDDKDHITIVVG----RQKEFARELEEIWRR 478 (481)
T ss_pred CHHHHHH-HHHhCCCCEEEEeCCCCCcchhhc----CHHHHHHHHHHHhhc
Confidence 9886654 4667789999999999999986 5 234688888888753
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.84 E-value=4.8e-20 Score=177.88 Aligned_cols=218 Identities=20% Similarity=0.249 Sum_probs=125.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEch
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSI 242 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSm 242 (578)
||++||++++. ..| ..+++.|. +||+|+++|+||+|.|+.... .....+.+++.++.+.+ +.....+++++|||+
T Consensus 1 vv~~hG~~~~~-~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l-~~~~~~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELL-DALGIKKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTG-GGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHH-HHTTTSSEEEEEETH
T ss_pred eEEECCCCCCH-HHH-HHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcc-ccccccccccccccc
Confidence 68999996544 455 67888884 799999999999999976542 11122222223333333 333346899999999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh--HHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 243 GANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD--RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 243 GG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~--~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
||.+++.++..+|+ +|+++|+++++....... ... ......+...... .........................
T Consensus 76 Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (228)
T PF12697_consen 76 GGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSR-SLRRLASRFFYRWFDGDEPEDLIRS- 150 (228)
T ss_dssp HHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHTHHHHHHHHHH-
T ss_pred cccccccccccccc--ccccceeeccccccccccccccc-chhhhhhhhcccc-ccccccccccccccccccccccccc-
Confidence 99999999999988 899999999887654322 111 1111111111000 0000000000000000000000000
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFF 400 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~ 400 (578)
....+.+.+... +........++++++|+++++|++|++++.+.... .....+++++.+++++||+.++
T Consensus 151 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 151 SRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEE-LADKLPNAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHH-HHHHSTTEEEEEETTSSSTHHH
T ss_pred cccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHHHH-HHHHCCCCEEEEECCCCCccHH
Confidence 000000000000 01112235667789999999999999999554433 4456789999999999999999
Q ss_pred c
Q 008093 401 E 401 (578)
Q Consensus 401 e 401 (578)
|
T Consensus 220 ~ 220 (228)
T PF12697_consen 220 E 220 (228)
T ss_dssp H
T ss_pred H
Confidence 8
No 34
>PLN02578 hydrolase
Probab=99.84 E-value=7.3e-20 Score=193.33 Aligned_cols=243 Identities=19% Similarity=0.184 Sum_probs=136.7
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|.||++||+++ +...| +.++..|.+ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 86 g~~vvliHG~~~-~~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG 158 (354)
T PLN02578 86 GLPIVLIHGFGA-SAFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVG 158 (354)
T ss_pred CCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEE
Confidence 356899999955 44445 566777764 699999999999999765322222234456666666553 35899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-----------HHhhHHH---HHHHHHHHHHhHHHHHhhhcc
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-----------FIGRRLI---QKIYDRALTIGLQDYAQLHEP 305 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~-----------~l~~~~~---~~~~~~~l~~~l~~~~~~~~~ 305 (578)
|||||.+++.+|.++|+ +++++|+++++........ ....... ...+.+.....+. .......
T Consensus 159 ~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (354)
T PLN02578 159 NSLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF-WQAKQPS 235 (354)
T ss_pred ECHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH-HHhcCHH
Confidence 99999999999999998 8999999986532211100 0000000 0011110000000 0000000
Q ss_pred cccccCCHHHHhccCCHHHH-HhhhhhccCCCCCHHHHHHh----------CCcccccCCCccceEEEEeCCCCCCCCCC
Q 008093 306 RYSRLANWEGIKKSRSIRDF-DSHATCLVGKFETVDTYYRN----------CSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 306 ~l~~~~d~~~i~~~~s~~ef-d~~~~~~~~g~~~~~~yy~~----------~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 374 (578)
.+.... ...........++ .+.+............+++. ......++++++|+|+|+|++|+++|.+.
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 236 RIESVL-KSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHH-HHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 000000 0000000000011 11111111111111122111 11224578899999999999999998875
Q ss_pred cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 375 IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
... .....++.+++++ ++||+.+.|. +..+.+.|.+|++
T Consensus 315 ~~~-l~~~~p~a~l~~i-~~GH~~~~e~----p~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AEK-IKAFYPDTTLVNL-QAGHCPHDEV----PEQVNKALLEWLS 353 (354)
T ss_pred HHH-HHHhCCCCEEEEe-CCCCCccccC----HHHHHHHHHHHHh
Confidence 543 4555678888888 5899999983 3469999999986
No 35
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.83 E-value=7.3e-20 Score=183.91 Aligned_cols=250 Identities=18% Similarity=0.143 Sum_probs=153.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
...|+|+++||+.- +...| +.....|+.+||+|+++|+||+|.|+.+.. ..|+ .....|+..+++++. .+++
T Consensus 42 ~~gP~illlHGfPe-~wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k~ 115 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPE-SWYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKKA 115 (322)
T ss_pred CCCCEEEEEccCCc-cchhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----ccee
Confidence 57899999999964 44445 788899999999999999999999987644 3333 233468888888776 5699
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh---hhhHHHh-------------hHHHHHHHHHHHHHhHHHH
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL---IGDRFIG-------------RRLIQKIYDRALTIGLQDY 299 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~---~~~~~l~-------------~~~~~~~~~~~l~~~l~~~ 299 (578)
+++||+|||.+++.++..+|+ +|+|+|+++.+.... ....... .......+.+...+.+...
T Consensus 116 ~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~ 193 (322)
T KOG4178|consen 116 FLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKT 193 (322)
T ss_pred EEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHh
Confidence 999999999999999999999 999999999876510 0000000 0000111111111111111
Q ss_pred HhhhcccccccCC----HH-HHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCc-----ccccCCCccceEEEEeCCCCC
Q 008093 300 AQLHEPRYSRLAN----WE-GIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSS-----STYVGNVSIPLLCISSLDDPV 369 (578)
Q Consensus 300 ~~~~~~~l~~~~d----~~-~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~-----~~~l~~I~vPvLiI~g~dDpi 369 (578)
............+ .. .......+.-++..+ ...|+...-+||+.... ...+.+|++|+++|+|..|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v 271 (322)
T KOG4178|consen 194 FRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPV 271 (322)
T ss_pred hhccccCCccccCCCCCCccchhhHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCccc
Confidence 1100000000000 00 000001111122221 22334444455554322 346788999999999999999
Q ss_pred CCCCCcchHHHhcCCCE-EEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 370 CTVEAIPWDECRANKNV-VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 370 vp~~~~~~~~~~~~~~~-~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+.........+..++. +.++++++||+...|. +..+++.+.+|+++.
T Consensus 272 ~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~----p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 272 LPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK----PQEVNQAILGFINSF 320 (322)
T ss_pred ccchhHHHHHHHhhccccceEEecCCcccccccC----HHHHHHHHHHHHHhh
Confidence 98762222233344444 7789999999998883 346999999999875
No 36
>PRK06489 hypothetical protein; Provisional
Probab=99.83 E-value=2.5e-19 Score=189.64 Aligned_cols=252 Identities=14% Similarity=0.118 Sum_probs=135.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHH-------HhCCceEEEEeCCCCCCCCCCCCCC----CCCCchHHHH-HHHHHHH
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNT-------AKRGWNVVVSNHRGLGGVSITSDCF----YNAGWTEDAR-EVIGYLH 227 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l-------~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~~~~~~Dl~-~~i~~l~ 227 (578)
+|+|||+||+++++..++...+...+ ..++|+|+++|+||||.|+...... .... .+|+. +++..+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~-~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYD-YDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCccc-HHHHHHHHHHHHH
Confidence 57899999997655443212344443 2468999999999999997543210 0111 23333 3334444
Q ss_pred HHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHH----------HHhH
Q 008093 228 HEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRAL----------TIGL 296 (578)
Q Consensus 228 ~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l----------~~~l 296 (578)
+..+..++. ++||||||++++.++.++|+ +|+++|++++........................ ...+
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSL 225 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 444555764 89999999999999999999 8999999986421111000000000000000000 0000
Q ss_pred HHHHhhhcccccccCCHHHHhccCC---HH-HHHhhhhhccCCCCCHHHHHH------hCCcccccCCCccceEEEEeCC
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRS---IR-DFDSHATCLVGKFETVDTYYR------NCSSSTYVGNVSIPLLCISSLD 366 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s---~~-efd~~~~~~~~g~~~~~~yy~------~~s~~~~l~~I~vPvLiI~g~d 366 (578)
........ .+.............. .. .++...... .. .....+.. ..+....+.+|++|+|+|+|++
T Consensus 226 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~ 302 (360)
T PRK06489 226 KRANPMFA-IATSGGTLAYQAQAPTRAAADKLVDERLAAP-VT-ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSAD 302 (360)
T ss_pred HHHHHHHH-HHHhCCHHHHHHhcCChHHHHHHHHHHHHhh-hh-cCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCC
Confidence 00000000 0000000000000000 00 001100000 00 01112211 1122356789999999999999
Q ss_pred CCCCCCCCc-chHHHhcCCCEEEEEeCCC----CccccccccccCcccHHHHHHHHHHhhc
Q 008093 367 DPVCTVEAI-PWDECRANKNVVLATTWHG----GHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 367 Dpivp~~~~-~~~~~~~~~~~~l~~~~~G----GH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
|+++|.+.. .....+..++.++++++++ ||+.+ | .|+ .+++.|.+||+.+.
T Consensus 303 D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e--~P~--~~~~~i~~FL~~~~ 358 (360)
T PRK06489 303 DERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-G--SAK--FWKAYLAEFLAQVP 358 (360)
T ss_pred CcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-c--CHH--HHHHHHHHHHHhcc
Confidence 999998753 1335667889999999985 99986 6 243 59999999998764
No 37
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=5.7e-19 Score=181.00 Aligned_cols=239 Identities=12% Similarity=0.056 Sum_probs=132.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+|+|||+||+. .+...| +.++..|.+ +|+|+++|+||||.|+......+ ..+|..+.+..+.+..+..+++++|
T Consensus 34 ~~~iv~lHG~~-~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG 107 (286)
T PRK03204 34 GPPILLCHGNP-TWSFLY-RDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY---QIDEHARVIGEFVDHLGLDRYLSMG 107 (286)
T ss_pred CCEEEEECCCC-ccHHHH-HHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46799999995 344445 667777754 69999999999999975432222 2355555555555556667899999
Q ss_pred EchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH-----H-HHHH-h-HHHHHhhhcccccccC
Q 008093 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD-----R-ALTI-G-LQDYAQLHEPRYSRLA 311 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~-----~-~l~~-~-l~~~~~~~~~~l~~~~ 311 (578)
|||||.+++.++..+|+ +|+++|+++++.-...... .......+. . .+.. . ..+.... ......
T Consensus 108 ~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 179 (286)
T PRK03204 108 QDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLA---MKAFSRVMSSPPVQYAILRRNFFVERLIPA---GTEHRP 179 (286)
T ss_pred ECccHHHHHHHHHhChh--heeEEEEECccccCCCchh---HHHHHHHhccccchhhhhhhhHHHHHhccc---cccCCC
Confidence 99999999999999988 8999998876531110000 000000000 0 0000 0 0000000 000000
Q ss_pred CHHHHh---ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 312 NWEGIK---KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 312 d~~~i~---~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
+...+. ......+...........+.......... ...+.+ +++|+|+|+|++|.++++........+..++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~ 257 (286)
T PRK03204 180 SSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARL--AREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDH 257 (286)
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHh--hhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCC
Confidence 000000 00000000000000000000000000000 011111 38999999999999987654333456678899
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
++.+++++||+.++|. |+ .+.+.+.+||
T Consensus 258 ~~~~i~~aGH~~~~e~--Pe--~~~~~i~~~~ 285 (286)
T PRK03204 258 VLVELPNAKHFIQEDA--PD--RIAAAIIERF 285 (286)
T ss_pred eEEEcCCCcccccccC--HH--HHHHHHHHhc
Confidence 9999999999999983 43 5888888886
No 38
>PRK07581 hypothetical protein; Validated
Probab=99.83 E-value=2.4e-19 Score=188.01 Aligned_cols=254 Identities=16% Similarity=0.115 Sum_probs=139.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHH---HHHHhCCceEEEEeCCCCCCCCCCCC--CCCCC------CchHHHHHHHHHHH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLV---FNTAKRGWNVVVSNHRGLGGVSITSD--CFYNA------GWTEDAREVIGYLH 227 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~---~~l~~~Gy~Vvv~D~RG~G~S~~~~~--~~~~~------~~~~Dl~~~i~~l~ 227 (578)
..|+||++||+++++.. + ..++ ..+...+|+|+++|+||||.|..... ..|+. ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~-~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD-N-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc-c-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 34678788887554433 3 2232 35556789999999999999865422 11221 23577777555565
Q ss_pred HHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHH----------HHHHHhH
Q 008093 228 HEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYD----------RALTIGL 296 (578)
Q Consensus 228 ~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~----------~~l~~~l 296 (578)
+..+..+ .++|||||||.+++.++..+|+ +|+++|++++............+.....+.. ......+
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 195 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGL 195 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHH
Confidence 5556678 5799999999999999999999 8999999986543211111000000000000 0000000
Q ss_pred HHHHhhh-----cccccccCCHHHHhccCCHHHHH-hhhhhcc--CCCCCHHHHH---H------h----CCcccccCCC
Q 008093 297 QDYAQLH-----EPRYSRLANWEGIKKSRSIRDFD-SHATCLV--GKFETVDTYY---R------N----CSSSTYVGNV 355 (578)
Q Consensus 297 ~~~~~~~-----~~~l~~~~d~~~i~~~~s~~efd-~~~~~~~--~g~~~~~~yy---~------~----~s~~~~l~~I 355 (578)
....... .+.+.....+... ......+.. ....... .........+ . . ......+.+|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 196 RAHARVYAGWGFSQAFYRQELWRAM-GYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHHhHHHHHHhhhcccc-ChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 0000000 0000000000000 000000000 0000000 0000111110 0 0 0123467889
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-CCccccccccccCcccHHHHHHHHHHhhc
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH-GGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~-GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
++|+|+|+|++|.++|.+.... ..+..++.++.++++ +||+.++|. ...+.+.|.+||+++.
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~-l~~~ip~a~l~~i~~~~GH~~~~~~----~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEA-EAALIPNAELRPIESIWGHLAGFGQ----NPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEeCCCCCccccccC----cHHHHHHHHHHHHHHH
Confidence 9999999999999999875543 456678899999998 899999983 3368899999999875
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.81 E-value=1.5e-18 Score=179.61 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=88.5
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
....+...||..+.+.-.. .+..+.||++||+.++.... .+...+...+|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g-----------------~~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~ 64 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSG-----------------NPDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRGC 64 (306)
T ss_pred cCCeEEcCCCcEEEEEECc-----------------CCCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCCC
Confidence 4467888888888753211 12245689999986654432 233445457899999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|.|+.... .+ ....+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ +++++|++++..
T Consensus 65 G~S~~~~~-~~-~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 65 GKSTPHAC-LE-ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCC-cc-cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 99974421 11 12234555555555555566689999999999999999999988 799999987643
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=7.5e-18 Score=180.75 Aligned_cols=260 Identities=13% Similarity=0.108 Sum_probs=136.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~i~ 236 (578)
..+|+||++||+++ +...| ...+..|.+ +|+|+++|+||||.|+............ +++.+.+....+..+..+++
T Consensus 103 ~~~p~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~ 179 (402)
T PLN02894 103 EDAPTLVMVHGYGA-SQGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFI 179 (402)
T ss_pred CCCCEEEEECCCCc-chhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 45689999999955 44445 345566765 6999999999999986532111111111 12222222222333556899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH---HHhh---HHHHHHHHHH---------HHHhHH----
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR---FIGR---RLIQKIYDRA---------LTIGLQ---- 297 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~---~l~~---~~~~~~~~~~---------l~~~l~---- 297 (578)
++||||||.+++.++.++++ +|+++|+++++........ .... .+...+.... +...+.
T Consensus 180 lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~ 257 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPE--HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGP 257 (402)
T ss_pred EEEECHHHHHHHHHHHhCch--hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhH
Confidence 99999999999999999988 8999999986432111110 0000 0000000000 000000
Q ss_pred HHHhhhc-ccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHH---HH------HHhCCcccccCCCccceEEEEeCCC
Q 008093 298 DYAQLHE-PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVD---TY------YRNCSSSTYVGNVSIPLLCISSLDD 367 (578)
Q Consensus 298 ~~~~~~~-~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~---~y------y~~~s~~~~l~~I~vPvLiI~g~dD 367 (578)
....... ..+........+. ......+.+.+......-.+.. .+ .........+.+|++|+++|+|++|
T Consensus 258 ~l~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D 336 (402)
T PLN02894 258 NLVRRYTTARFGAHSTGDILS-EEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHD 336 (402)
T ss_pred HHHHHHHHHHhhhcccccccC-cchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCC
Confidence 0000000 0000000000000 0000111111100000000000 00 0111223457889999999999999
Q ss_pred CCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCCCccc
Q 008093 368 PVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSSPYMH 428 (578)
Q Consensus 368 pivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~~~~~ 428 (578)
.+.+.... ........++++.+++++||+.+.|. |+ .+++.|.+|++.+....+.+
T Consensus 337 ~i~~~~~~-~~~~~~~~~~~~~~i~~aGH~~~~E~--P~--~f~~~l~~~~~~~~~~~~~~ 392 (402)
T PLN02894 337 WMNYEGAV-EARKRMKVPCEIIRVPQGGHFVFLDN--PS--GFHSAVLYACRKYLSPDREE 392 (402)
T ss_pred CCCcHHHH-HHHHHcCCCCcEEEeCCCCCeeeccC--HH--HHHHHHHHHHHHhccCCchh
Confidence 87764322 22233345688999999999999993 33 59999999999988765443
No 41
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=5.8e-18 Score=181.97 Aligned_cols=244 Identities=16% Similarity=0.121 Sum_probs=151.7
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.++..++..||.++...++.|.. +.+.|+||++||+.+ ..+.++..++..|+++||+|+++|+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~--------------~~~~P~Vli~gG~~~-~~~~~~~~~~~~La~~Gy~vl~~D~ 230 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG--------------DGPFPTVLVCGGLDS-LQTDYYRLFRDYLAPRGIAMLTIDM 230 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC--------------CCCccEEEEeCCccc-chhhhHHHHHHHHHhCCCEEEEECC
Confidence 4567778888888788776665532 246788888888843 3333336788899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
||+|.|.... ..........++++++.... +..+++++||||||+++++++..+++ +|+++|+++++.+....
T Consensus 231 pG~G~s~~~~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~ 305 (414)
T PRK05077 231 PSVGFSSKWK---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLT 305 (414)
T ss_pred CCCCCCCCCC---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhc
Confidence 9999985431 11122233457788887653 45689999999999999999998887 89999999988753211
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc-cCC
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY-VGN 354 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~-l~~ 354 (578)
........ ...+...+. ... . . ...+.+ .+...+ ..+... .... ..+
T Consensus 306 ~~~~~~~~-p~~~~~~la----~~l---g--~-~~~~~~---------~l~~~l----~~~sl~--------~~~~l~~~ 353 (414)
T PRK05077 306 DPKRQQQV-PEMYLDVLA----SRL---G--M-HDASDE---------ALRVEL----NRYSLK--------VQGLLGRR 353 (414)
T ss_pred chhhhhhc-hHHHHHHHH----HHh---C--C-CCCChH---------HHHHHh----hhccch--------hhhhhccC
Confidence 11000000 000111010 000 0 0 000111 111110 001000 0011 257
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
+++|+|+|+|++|+++|.+.... .....++.++++++++. .+++ ...+.+.+.+||+..
T Consensus 354 i~~PvLiI~G~~D~ivP~~~a~~-l~~~~~~~~l~~i~~~~---~~e~----~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 354 CPTPMLSGYWKNDPFSPEEDSRL-IASSSADGKLLEIPFKP---VYRN----FDKALQEISDWLEDR 412 (414)
T ss_pred CCCcEEEEecCCCCCCCHHHHHH-HHHhCCCCeEEEccCCC---ccCC----HHHHHHHHHHHHHHH
Confidence 99999999999999999886653 34567888999999863 3342 235888999998764
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.80 E-value=3.9e-18 Score=171.95 Aligned_cols=302 Identities=16% Similarity=0.141 Sum_probs=165.9
Q ss_pred cccCCCCCchh--HHHhhhhhhcCCCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC
Q 008093 93 YLVTPWLSSPH--IQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT 170 (578)
Q Consensus 93 y~P~~wl~~gh--lQT~~~~~~~~~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~ 170 (578)
+.|+.|+...+ ++++-...+. .-.++|..+.+.++++..+..--... ....++.+|++||++
T Consensus 37 ~~~~~w~~~~~~~l~~~e~ril~-~~~v~~~~~~v~i~~~~~iw~~~~~~---------------~~~~~~plVliHGyG 100 (365)
T KOG4409|consen 37 WLPTLWCSTSRDQLKEAEKRILS-SVPVPYSKKYVRIPNGIEIWTITVSN---------------ESANKTPLVLIHGYG 100 (365)
T ss_pred cCCcccccchHHHHHHHHHhhhh-hcCCCcceeeeecCCCceeEEEeecc---------------cccCCCcEEEEeccc
Confidence 44555776544 6665433333 23578899999888665553211111 124455688999997
Q ss_pred CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 171 G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
++... |++.+ +.|++ .++|+++|++|+|.|+.+.=............+-++.-+...+-.+++++||||||+++..|
T Consensus 101 Ag~g~-f~~Nf-~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~Y 177 (365)
T KOG4409|consen 101 AGLGL-FFRNF-DDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKY 177 (365)
T ss_pred hhHHH-HHHhh-hhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHH
Confidence 66554 43554 45555 79999999999999976532222223334566667777777777899999999999999999
Q ss_pred HhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHH--------hHHHHHhhhcccccccCCHHHHhccC
Q 008093 251 LGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI--------GLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 251 a~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~--------~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|.++|+ +|..+|+++|..-.... ........ ...+ +.+.. .+.+......+.+....-.+...+..
T Consensus 178 AlKyPe--rV~kLiLvsP~Gf~~~~~~~~~~~~~~-~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~ 253 (365)
T KOG4409|consen 178 ALKYPE--RVEKLILVSPWGFPEKPDSEPEFTKPP-PEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFP 253 (365)
T ss_pred HHhChH--hhceEEEecccccccCCCcchhhcCCC-hHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcc
Confidence 999999 89999998763211100 00000000 0000 00000 00000000011111101111111111
Q ss_pred C--HHHH-HhhhhhccCCCCCHHHHHHh---------CCcccccCCCc--cceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008093 321 S--IRDF-DSHATCLVGKFETVDTYYRN---------CSSSTYVGNVS--IPLLCISSLDDPVCTVEAIPWDECRANKNV 386 (578)
Q Consensus 321 s--~~ef-d~~~~~~~~g~~~~~~yy~~---------~s~~~~l~~I~--vPvLiI~g~dDpivp~~~~~~~~~~~~~~~ 386 (578)
+ ..++ .+++......-.+-+..+.. ....+.+..++ +|+++|+|++|-+--..............+
T Consensus 254 ~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~ 333 (365)
T KOG4409|consen 254 SLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYV 333 (365)
T ss_pred ccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccc
Confidence 1 1111 11111111111111111111 11123344454 999999999996644433333223355678
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 387 VLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 387 ~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
...+++++||..|++. |+ -+++.|.++++..
T Consensus 334 ~~~~v~~aGHhvylDn--p~--~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 334 EIIIVPGAGHHVYLDN--PE--FFNQIVLEECDKV 364 (365)
T ss_pred eEEEecCCCceeecCC--HH--HHHHHHHHHHhcc
Confidence 9999999999999984 43 5999999988753
No 43
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.79 E-value=2.2e-18 Score=161.65 Aligned_cols=231 Identities=16% Similarity=0.220 Sum_probs=159.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
+++|+|..+.++|..++...|... ..++|+++++||..|+..... ...--.+...+.+|+.++
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~----------------E~S~pTlLyfh~NAGNmGhr~-~i~~~fy~~l~mnv~ivs 113 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS----------------ESSRPTLLYFHANAGNMGHRL-PIARVFYVNLKMNVLIVS 113 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc----------------cCCCceEEEEccCCCcccchh-hHHHHHHHHcCceEEEEE
Confidence 479999999999999998766542 247899999999988655422 322234456789999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+||+|.|++.+. ..|..-|.+++++|+..+. ..+++++.|.|+||.+++..|++..+ ++.++++-+.-.....
T Consensus 114 YRGYG~S~Gsps---E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SIp~ 188 (300)
T KOG4391|consen 114 YRGYGKSEGSPS---EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSIPH 188 (300)
T ss_pred eeccccCCCCcc---ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccchh
Confidence 999999987643 3567789999999998764 46789999999999999999999888 7888775533221100
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
..- ..+..+-. +.+..|. +++ .-.+...+.+
T Consensus 189 ~~i----~~v~p~~~------------------------------k~i~~lc---------~kn------~~~S~~ki~~ 219 (300)
T KOG4391|consen 189 MAI----PLVFPFPM------------------------------KYIPLLC---------YKN------KWLSYRKIGQ 219 (300)
T ss_pred hhh----heeccchh------------------------------hHHHHHH---------HHh------hhcchhhhcc
Confidence 000 00000000 0000000 000 1112345667
Q ss_pred CccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPW-DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
.++|.|+|.|..|.+||+..+.. ...-.+.+.++..+|+|.|..-.- .+. +.+++.+||.++..
T Consensus 220 ~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i---~dG--Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 220 CRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI---CDG--YFQAIEDFLAEVVK 284 (300)
T ss_pred ccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE---ecc--HHHHHHHHHHHhcc
Confidence 78999999999999999976543 233345678899999999976443 122 67899999998765
No 44
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=1.5e-18 Score=180.40 Aligned_cols=276 Identities=19% Similarity=0.175 Sum_probs=159.2
Q ss_pred eEEEEEecCCc-EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCC
Q 008093 121 RRQLFRLSDGG-MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHR 198 (578)
Q Consensus 121 ~r~~l~~~DG~-~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~R 198 (578)
+...+..+.|. ++..-|...... -..+.+.++|.||++|||.+ +...| +..+..+.+. |++|+++|..
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~--------~~~~~~~~~~pvlllHGF~~-~~~~w-~~~~~~L~~~~~~~v~aiDl~ 95 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDK--------YGSPGDKDKPPVLLLHGFGA-SSFSW-RRVVPLLSKAKGLRVLAIDLP 95 (326)
T ss_pred cceEEEcccCCceeEEEEecccee--------ccCCCCCCCCcEEEeccccC-CcccH-hhhccccccccceEEEEEecC
Confidence 44556666664 777788765421 00011246778999999965 55455 6777777665 6999999999
Q ss_pred CCCC-CCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE---EEcCCcchhh
Q 008093 199 GLGG-VSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA---AICSPWDLLI 274 (578)
Q Consensus 199 G~G~-S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V---lis~p~d~~~ 274 (578)
|+|. |+......|. ..+..+.+..+...+...+++++||||||.+++.+|+.+|+ .|+++| +++++.....
T Consensus 96 G~g~~s~~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~~ 170 (326)
T KOG1454|consen 96 GHGYSSPLPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYSTP 170 (326)
T ss_pred CCCcCCCCCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccCC
Confidence 9994 4433333232 35566666666666777789999999999999999999999 899999 6766654433
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH---HH-----hccCCHHHHHhhhhhcc--CCCC----CHH
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE---GI-----KKSRSIRDFDSHATCLV--GKFE----TVD 340 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~---~i-----~~~~s~~efd~~~~~~~--~g~~----~~~ 340 (578)
............+.... .+........+. ...... .+ ........+......+. ...+ +..
T Consensus 171 ~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T KOG1454|consen 171 KGIKGLRRLLDKFLSAL---ELLIPLSLTEPV--RLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLF 245 (326)
T ss_pred cchhHHHHhhhhhccHh---hhcCccccccch--hheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEE
Confidence 22111111111110000 000000000000 000000 00 00001111111111100 0000 000
Q ss_pred HHHH--hCCcccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHH
Q 008093 341 TYYR--NCSSSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEY 417 (578)
Q Consensus 341 ~yy~--~~s~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eF 417 (578)
.+.. .......+.+|. +|+|+++|++|+++|.+.... ..+..+|.++.+++++||+.+.|. |+ .+++.+..|
T Consensus 246 ~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~-~~~~~pn~~~~~I~~~gH~~h~e~--Pe--~~~~~i~~F 320 (326)
T KOG1454|consen 246 LELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE-LKKKLPNAELVEIPGAGHLPHLER--PE--EVAALLRSF 320 (326)
T ss_pred EeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH-HHhhCCCceEEEeCCCCcccccCC--HH--HHHHHHHHH
Confidence 0000 112234567776 999999999999999984333 445569999999999999999982 43 589999999
Q ss_pred HHhh
Q 008093 418 LGVL 421 (578)
Q Consensus 418 L~~~ 421 (578)
+...
T Consensus 321 i~~~ 324 (326)
T KOG1454|consen 321 IARL 324 (326)
T ss_pred HHHh
Confidence 8865
No 45
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=1.3e-18 Score=183.03 Aligned_cols=232 Identities=12% Similarity=0.035 Sum_probs=123.7
Q ss_pred HHHHH---HHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhc
Q 008093 179 RHLVF---NTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 179 ~~l~~---~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~ 254 (578)
..++. .|...+|+|+++|+||||.|... ........+|+.++++.+. ..+ ++++||||||++++.++.++
T Consensus 86 ~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~~~~~a~dl~~ll~~l~----l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 86 EGLVGSGRALDPARFRLLAFDFIGADGSLDV--PIDTADQADAIALLLDALG----IARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred hhccCCCCccCccccEEEEEeCCCCCCCCCC--CCCHHHHHHHHHHHHHHcC----CCcceEEEEECHHHHHHHHHHHHC
Confidence 55664 45445899999999999987432 1111234566666665543 334 57999999999999999999
Q ss_pred CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHH-----------HHHHHHh--HHHH--HhhhcccccccCCHHHHhcc
Q 008093 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIY-----------DRALTIG--LQDY--AQLHEPRYSRLANWEGIKKS 319 (578)
Q Consensus 255 p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~-----------~~~l~~~--l~~~--~~~~~~~l~~~~d~~~i~~~ 319 (578)
|+ +|.++|++++............ ....... ....... +..+ .......+........-...
T Consensus 160 P~--~V~~LvLi~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (343)
T PRK08775 160 PA--RVRTLVVVSGAHRAHPYAAAWR-ALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVR 236 (343)
T ss_pred hH--hhheEEEECccccCCHHHHHHH-HHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCcc
Confidence 98 8999999997643321110000 0000000 0000000 0000 00000000000000000000
Q ss_pred CCHHHHHhhhh---hccCCCCCHHHHHHhCC-cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-C
Q 008093 320 RSIRDFDSHAT---CLVGKFETVDTYYRNCS-SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH-G 394 (578)
Q Consensus 320 ~s~~efd~~~~---~~~~g~~~~~~yy~~~s-~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~-G 394 (578)
.....+..... .............+... ....+.+|++|+|+|+|++|.++|.+..........++..++++++ +
T Consensus 237 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~a 316 (343)
T PRK08775 237 VAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPY 316 (343)
T ss_pred chHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCc
Confidence 00010100000 00000000111111111 1224688999999999999999997654433333447889999985 9
Q ss_pred CccccccccccCcccHHHHHHHHHHhhcC
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
||+.++|. +..+++.+.+||++..+
T Consensus 317 GH~~~lE~----Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 317 GHDAFLKE----TDRIDAILTTALRSTGE 341 (343)
T ss_pred cHHHHhcC----HHHHHHHHHHHHHhccc
Confidence 99999993 34699999999987654
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=9e-18 Score=171.10 Aligned_cols=254 Identities=16% Similarity=0.091 Sum_probs=145.8
Q ss_pred cCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc--HHHHHHHHHHHhCCceEEEEeCCCCCCCCC
Q 008093 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205 (578)
Q Consensus 128 ~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~--~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~ 205 (578)
.+|.++...++.|.+ ..++.||++||.++.... .....+++.|+++||+|+++|+||||.|+.
T Consensus 9 ~~~~~l~g~~~~p~~---------------~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~ 73 (274)
T TIGR03100 9 CEGETLVGVLHIPGA---------------SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEG 73 (274)
T ss_pred cCCcEEEEEEEcCCC---------------CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCC
Confidence 456666655555432 234557777775432221 122567899999999999999999999875
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHCC-CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHH
Q 008093 206 TSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLI 284 (578)
Q Consensus 206 ~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~ 284 (578)
... ....+.+|+.++++++++..+ ..+++++||||||.+++.++... . +|+++|++++++........ . ..
T Consensus 74 ~~~--~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~~~~~~~~~~--~-~~ 145 (274)
T TIGR03100 74 ENL--GFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPWVRTEAAQAA--S-RI 145 (274)
T ss_pred CCC--CHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCccCCcccchH--H-HH
Confidence 321 123466899999999988764 45799999999999999987653 3 69999999987543221100 0 11
Q ss_pred HHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhh-h-ccCCCCCHHHHHHhCCcccccCCCccceEEE
Q 008093 285 QKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHAT-C-LVGKFETVDTYYRNCSSSTYVGNVSIPLLCI 362 (578)
Q Consensus 285 ~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~-~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI 362 (578)
...|...+... .+... .+....+...+. ..+..... . ...........- ......+.++++|+|++
T Consensus 146 ~~~~~~~~~~~--~~~~~---~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~P~ll~ 213 (274)
T TIGR03100 146 RHYYLGQLLSA--DFWRK---LLSGEVNLGSSL-----RGLGDALLKARQKGDEVAHGGLA--ERMKAGLERFQGPVLFI 213 (274)
T ss_pred HHHHHHHHhCh--HHHHH---hcCCCccHHHHH-----HHHHHHHHhhhhcCCCcccchHH--HHHHHHHHhcCCcEEEE
Confidence 11222111111 11110 011111111110 01111000 0 000000000010 01123566779999999
Q ss_pred EeCCCCCCCCCC------cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 363 SSLDDPVCTVEA------IPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 363 ~g~dDpivp~~~------~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+|..|+..+.-. ..+.....++++++..++++||+...| ..+..+.+.|.+||+
T Consensus 214 ~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 214 LSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred EcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 999999864211 111111244899999999999977666 344578999999985
No 47
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.78 E-value=1.8e-17 Score=175.91 Aligned_cols=242 Identities=13% Similarity=0.108 Sum_probs=134.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC---CCC-CCchHHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC---FYN-AGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~---~~~-~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
.+|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+..... .++ ..+.+|+.++++.+. ..+
T Consensus 126 ~~~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPS-QAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDK 198 (383)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCC
Confidence 4578999999954 44456 778888865 899999999999999765331 122 234566666666553 458
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh--hHHHhhHHHHHHHHHHHHH-hHHHHHhhhcccccccC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG--DRFIGRRLIQKIYDRALTI-GLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~--~~~l~~~~~~~~~~~~l~~-~l~~~~~~~~~~l~~~~ 311 (578)
++++|||+||.+++.++.++|+ +|+++|+++++...... ...+. .+...+....+.. .+...............
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~~~~~~~p~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLTKEHAKLPSTLS-EFSNFLLGEIFSQDPLRASDKALTSCGPYAM 275 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCccccccchHHHH-HHHHHHhhhhhhcchHHHHhhhhcccCccCC
Confidence 9999999999999999999998 89999999987532110 00000 0000000000000 00000000000000000
Q ss_pred CHHHHhc--c-----CCH-HHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcC
Q 008093 312 NWEGIKK--S-----RSI-RDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN 383 (578)
Q Consensus 312 d~~~i~~--~-----~s~-~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~ 383 (578)
..+.... . ... ..+.. +..... .....+...........+|++|+|+|+|++|++++.+.... .++.
T Consensus 276 ~~e~~~~~~~~~~~~~~~~~~l~~-~~r~~~--~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~-~a~~- 350 (383)
T PLN03084 276 KEDDAMVYRRPYLTSGSSGFALNA-ISRSMK--KELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED-FCKS- 350 (383)
T ss_pred CHHHHHHHhccccCCcchHHHHHH-HHHHhh--cccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH-HHHh-
Confidence 0000000 0 000 00000 000000 00000110000000114689999999999999998875443 2333
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+.++.+++++||+.+.|. | ..+.+.|.+|+.
T Consensus 351 ~~a~l~vIp~aGH~~~~E~--P--e~v~~~I~~Fl~ 382 (383)
T PLN03084 351 SQHKLIELPMAGHHVQEDC--G--EELGGIISGILS 382 (383)
T ss_pred cCCeEEEECCCCCCcchhC--H--HHHHHHHHHHhh
Confidence 4788999999999999983 3 358889999875
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.78 E-value=3e-18 Score=180.81 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=76.2
Q ss_pred CCcEEEEECCCCCCCccH---------HHHHHH---HHHHhCCceEEEEeCCC--CCCCCCCC----CCCCC----CCch
Q 008093 159 TTPIAIVIPGLTSDSAAS---------YIRHLV---FNTAKRGWNVVVSNHRG--LGGVSITS----DCFYN----AGWT 216 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~---------yi~~l~---~~l~~~Gy~Vvv~D~RG--~G~S~~~~----~~~~~----~~~~ 216 (578)
..|+||++||+++++... |+..++ ..+...+|+|+++|+|| ||.|...+ ...+. ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 357899999998765431 335554 25556899999999999 45443211 11111 0112
Q ss_pred HHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 217 EDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+|+.+.+..+.+..+..+ ++++||||||.+++.++..+|+ +|+++|+++++...
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCcC
Confidence 444444444444555567 9999999999999999999998 89999999986543
No 49
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.77 E-value=1.9e-17 Score=175.25 Aligned_cols=238 Identities=16% Similarity=0.104 Sum_probs=132.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..|+||++||++++.. .| ..++..|.+ +|+|+++|+||||.|...... ...+++.+.+..+.+..+..+++++
T Consensus 130 ~~~~vl~~HG~~~~~~-~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lv 202 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN-NW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHLV 202 (371)
T ss_pred CCCeEEEECCCCCccc-hH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEEE
Confidence 4578999999965444 45 566777765 599999999999998543221 1234555555555555666789999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++..+++ ++.++|+++++.............+........+...+....... ..+.. ........
T Consensus 203 G~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 278 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADP-ALVTR-QMVEDLLK 278 (371)
T ss_pred eechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcCh-hhCCH-HHHHHHHH
Confidence 999999999999999887 799999998763221111000000000000000000000000000 00000 00000000
Q ss_pred ---cCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC
Q 008093 319 ---SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGG 395 (578)
Q Consensus 319 ---~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG 395 (578)
..........+... .+... ....+....+.++++|+|+++|++|+++|.+.. ....+++.+.+++++|
T Consensus 279 ~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~----~~l~~~~~~~~~~~~g 349 (371)
T PRK14875 279 YKRLDGVDDALRALADA--LFAGG---RQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA----QGLPDGVAVHVLPGAG 349 (371)
T ss_pred HhccccHHHHHHHHHHH--hccCc---ccchhHHHHHhcCCCCEEEEEECCCCccCHHHH----hhccCCCeEEEeCCCC
Confidence 00000000000000 00000 000112235678899999999999999986532 2234578899999999
Q ss_pred ccccccccccCcccHHHHHHHHHHh
Q 008093 396 HLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 396 H~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
|+.+++. +.++.+.|.+||+.
T Consensus 350 H~~~~e~----p~~~~~~i~~fl~~ 370 (371)
T PRK14875 350 HMPQMEA----AADVNRLLAEFLGK 370 (371)
T ss_pred CChhhhC----HHHHHHHHHHHhcc
Confidence 9999883 34688888888864
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.76 E-value=2.8e-17 Score=184.17 Aligned_cols=271 Identities=17% Similarity=0.187 Sum_probs=145.0
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
+.+...||..+++.++.+ +++|+|||+||+++ +...| +.+...| ..||+|+++|+||||.
T Consensus 5 ~~~~~~~g~~l~~~~~g~-----------------~~~~~ivllHG~~~-~~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~ 64 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-----------------PDRPTVVLVHGYPD-NHEVW-DGVAPLL-ADRFRVVAYDVRGAGR 64 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-----------------CCCCeEEEEcCCCc-hHHHH-HHHHHHh-hcceEEEEecCCCCCC
Confidence 455567898988776432 24678999999964 44445 6788887 5689999999999999
Q ss_pred CCCCCC-CCCC-CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHh
Q 008093 203 VSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (578)
Q Consensus 203 S~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~ 280 (578)
|..... ..++ ..+.+|+.++++.+. ...+++++||||||.+++.++........+..++.++.+.... ...+..
T Consensus 65 S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~-~~~~~~ 140 (582)
T PRK05855 65 SSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH-VGFWLR 140 (582)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH-HHHHHh
Confidence 975432 2222 345577777777653 2346999999999999998887632222455666665543111 000000
Q ss_pred hHH---HHHHHHHHHHHhHHHH-H-hhhccccccc-----C--CHHH-HhccC--CHHHHHhhhhhccCCCCCHHHHH--
Q 008093 281 RRL---IQKIYDRALTIGLQDY-A-QLHEPRYSRL-----A--NWEG-IKKSR--SIRDFDSHATCLVGKFETVDTYY-- 343 (578)
Q Consensus 281 ~~~---~~~~~~~~l~~~l~~~-~-~~~~~~l~~~-----~--d~~~-i~~~~--s~~efd~~~~~~~~g~~~~~~yy-- 343 (578)
... ........+....... . ....+.+... . .+.. ..... .......... ..........+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 219 (582)
T PRK05855 141 SGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTT-LSDGAHGVKLYRAN 219 (582)
T ss_pred hcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhh-hccccchHHHHHhh
Confidence 000 0000000000000000 0 0000000000 0 0000 00000 0000000000 000011111111
Q ss_pred -HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 344 -RNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 344 -~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
........+..+++|+|+|+|++|+++|.+.... .....++..+.+++ +||+.++|. | ..+.+.|.+|++...
T Consensus 220 ~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e~--p--~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 220 MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDD-LSRWVPRLWRREIK-AGHWLPMSH--P--QVLAAAVAEFVDAVE 293 (582)
T ss_pred hhhhhccCccCCccCceEEEEeCCCcccCHHHhcc-ccccCCcceEEEcc-CCCcchhhC--h--hHHHHHHHHHHHhcc
Confidence 1111122356689999999999999999875543 23445667777765 799999983 3 368999999999865
Q ss_pred CC
Q 008093 423 SS 424 (578)
Q Consensus 423 ~~ 424 (578)
..
T Consensus 294 ~~ 295 (582)
T PRK05855 294 GG 295 (582)
T ss_pred CC
Confidence 43
No 51
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.76 E-value=2.5e-17 Score=175.53 Aligned_cols=107 Identities=18% Similarity=0.219 Sum_probs=73.7
Q ss_pred CCcEEEEECCCCCCCccH-----------HHHHHHH---HHHhCCceEEEEeCCC-CCCCCCCCC------C-------C
Q 008093 159 TTPIAIVIPGLTSDSAAS-----------YIRHLVF---NTAKRGWNVVVSNHRG-LGGVSITSD------C-------F 210 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~-----------yi~~l~~---~l~~~Gy~Vvv~D~RG-~G~S~~~~~------~-------~ 210 (578)
.+|.||++||+++++... |+..++. .+...+|+|+++|+|| +|+|..... . .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 368899999998766531 2255542 4445689999999999 355533211 0 1
Q ss_pred CC-CCchHHHHHHHHHHHHHCCCCc-EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 211 YN-AGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 211 ~~-~~~~~Dl~~~i~~l~~~~~~~~-i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
|+ ..+.+|+.++++++ +..+ .+++||||||.+++.++.++|+ +|+++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 11 22334555555443 4456 5899999999999999999998 8999999997653
No 52
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.75 E-value=3.1e-17 Score=167.05 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=79.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..+|+|||+||+.++. ..| ..++..|.+.||+|+++|+||||.|....... .++.+++..+.+.+.......++++
T Consensus 16 ~~~p~vvliHG~~~~~-~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSV--TTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCCCc-CcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccC--CCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4578899999996544 445 78888888889999999999999875332221 2233444445555544323468999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|||||||.+++.++..+++ +|+++|++++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999988887 89999999763
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.72 E-value=6e-17 Score=170.85 Aligned_cols=108 Identities=12% Similarity=0.125 Sum_probs=85.2
Q ss_pred cEEEEECCCCCCCccHH----HHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCcE
Q 008093 161 PIAIVIPGLTSDSAASY----IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 161 PiVVllHGl~G~s~~~y----i~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~i 235 (578)
++||++||+.. +...+ .+.+++.|.++||+|+++|+||+|.+.... ....+. +|+.++++++.+..+..++
T Consensus 63 ~pvl~v~~~~~-~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~~~~~~v~~l~~~~~~~~i 138 (350)
T TIGR01836 63 TPLLIVYALVN-RPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYINGYIDKCVDYICRTSKLDQI 138 (350)
T ss_pred CcEEEeccccc-cceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 34889999843 22111 157899999999999999999999764221 112233 4688999999998888899
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+++||||||.+++.|++.+++ +|+++|++++|+++..
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFET 175 (350)
T ss_pred cEEEECHHHHHHHHHHHhCch--heeeEEEeccccccCC
Confidence 999999999999999999887 7999999999988643
No 54
>PRK10566 esterase; Provisional
Probab=99.71 E-value=3.4e-16 Score=156.49 Aligned_cols=209 Identities=14% Similarity=0.107 Sum_probs=125.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCC-CCC------CchHHHHHHHHHHHHHC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF-YNA------GWTEDAREVIGYLHHEY 230 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~-~~~------~~~~Dl~~~i~~l~~~~ 230 (578)
...|+||++||++++ ...| ..++..|+++||+|+++|+||||.+....... ... ...+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSS-KLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcc-cchH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356899999999654 4445 67899999999999999999999753221111 110 12367778888887653
Q ss_pred --CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhccccc
Q 008093 231 --PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYS 308 (578)
Q Consensus 231 --~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~ 308 (578)
+..+++++||||||.+++.++..+++ +.+.+.+..+.... .+....+ .+...
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~~~-----------~~~~~ 156 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFT------------SLARTLF-----------PPLIP 156 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHH------------HHHHHhc-----------ccccc
Confidence 35689999999999999998887765 55554443221110 0000000 00000
Q ss_pred ccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCCcchHHH--hcC--
Q 008093 309 RLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV-SIPLLCISSLDDPVCTVEAIPWDEC--RAN-- 383 (578)
Q Consensus 309 ~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I-~vPvLiI~g~dDpivp~~~~~~~~~--~~~-- 383 (578)
. . ......+.... . .....+....+.++ ++|+|+++|++|+++|.+....... ...
T Consensus 157 ~-~-------~~~~~~~~~~~-~----------~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 157 E-T-------AAQQAEFNNIV-A----------PLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred c-c-------cccHHHHHHHH-H----------HHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 0 0 00011111110 0 01111223345666 7999999999999999874433211 111
Q ss_pred -CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 384 -KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 384 -~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.++++..++++||... + -..+.+.+||++.
T Consensus 218 ~~~~~~~~~~~~~H~~~-----~---~~~~~~~~fl~~~ 248 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT-----P---EALDAGVAFFRQH 248 (249)
T ss_pred CcceEEEecCCCCCccC-----H---HHHHHHHHHHHhh
Confidence 2478889999999632 1 2568899999853
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.70 E-value=1.1e-16 Score=156.30 Aligned_cols=209 Identities=22% Similarity=0.252 Sum_probs=123.5
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 190 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|+|+++|+||+|.|+............+|+.+.++.+.+..+..+++++||||||.+++.||.++|+ +|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999973101222333468999999999999888899999999999999999999999 99999999886
Q ss_pred c--chhhhhHHHhh-HHHHHHHHHH---HHHhHHHHHhhhcc---cccc--cCCHHHHhccCCHHHHHhhhhhccCCCCC
Q 008093 270 W--DLLIGDRFIGR-RLIQKIYDRA---LTIGLQDYAQLHEP---RYSR--LANWEGIKKSRSIRDFDSHATCLVGKFET 338 (578)
Q Consensus 270 ~--d~~~~~~~l~~-~~~~~~~~~~---l~~~l~~~~~~~~~---~l~~--~~d~~~i~~~~s~~efd~~~~~~~~g~~~ 338 (578)
. ........... .......... .............. .... ..+............+.... .....+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 157 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETD-AFDNMFWN 157 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHH-HHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHH-HHhhhccc
Confidence 2 11111111111 0000000000 00000100000000 0000 00000000000000000000 00000002
Q ss_pred HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008093 339 VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402 (578)
Q Consensus 339 ~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg 402 (578)
...++........+.+|++|+|+++|++|+++|.+.... ..+..++.++++++++||+.++++
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHS
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcC
Confidence 334444445556788899999999999999999886665 567889999999999999999985
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.70 E-value=4.7e-16 Score=151.51 Aligned_cols=195 Identities=18% Similarity=0.148 Sum_probs=138.3
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~ 236 (578)
..++++++||...+-.... .+...+.. .+++++.+|++|+|.|+++.... +..+|+.++.+++++++ +.++++
T Consensus 59 ~~~~lly~hGNa~Dlgq~~--~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~---n~y~Di~avye~Lr~~~g~~~~Ii 133 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMV--ELFKELSIFLNCNVVSYDYSGYGRSSGKPSER---NLYADIKAVYEWLRNRYGSPERII 133 (258)
T ss_pred cceEEEEcCCcccchHHHH--HHHHHHhhcccceEEEEecccccccCCCcccc---cchhhHHHHHHHHHhhcCCCceEE
Confidence 4589999999865555322 33333433 48999999999999998876543 55699999999999999 588999
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
++|+|||+..++.+|++.+ ++|+|+.+|-.+.... +. +..
T Consensus 134 l~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv----------------~~-----------~~~--------- 173 (258)
T KOG1552|consen 134 LYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRV----------------AF-----------PDT--------- 173 (258)
T ss_pred EEEecCCchhhhhHhhcCC----cceEEEeccchhhhhh----------------hc-----------cCc---------
Confidence 9999999999999999985 6788888654432110 00 000
Q ss_pred hccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 317 KKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
.++ .-|| .| ...+.+..|++|+|++||.+|.+++............+..+-....++||
T Consensus 174 --~~~-~~~d--------~f----------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH 232 (258)
T KOG1552|consen 174 --KTT-YCFD--------AF----------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGH 232 (258)
T ss_pred --ceE-Eeec--------cc----------cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCC
Confidence 000 0001 11 11577888999999999999999999866543333334457778899999
Q ss_pred cccccccccCcccHHHHHHHHHHhhcCC
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+...-. ..+.+.+.+|+..+...
T Consensus 233 ~~~~~~-----~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 233 NDIELY-----PEYIEHLRRFISSVLPS 255 (258)
T ss_pred cccccC-----HHHHHHHHHHHHHhccc
Confidence 864431 14888999999887654
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.68 E-value=3.8e-15 Score=183.41 Aligned_cols=247 Identities=15% Similarity=0.150 Sum_probs=134.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC-C---CCCCchHHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-F---YNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-~---~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
.+|+|||+||++++.. .| ..++..|.+ +|+|+++|+||||.|...... . ......+++.+.+..+.+.....+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w-~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DW-IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999966554 45 677777764 699999999999998654210 0 001112344433333333344568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh-HHHhhHHHHHHHHHHHHHhHHHHHhhhc-ccccccCC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-RFIGRRLIQKIYDRALTIGLQDYAQLHE-PRYSRLAN 312 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~-~~l~~~~~~~~~~~~l~~~l~~~~~~~~-~~l~~~~d 312 (578)
++++||||||.+++.++.++|+ +|+++|++++........ ..+................+..+..... +.+
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~----- 1519 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSD--KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGEL----- 1519 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHH-----
Confidence 9999999999999999999998 899999998643221110 0000000000000000001111110000 000
Q ss_pred HHHHhccCCHHHHHhhhhhccC--CCCCHHHHHH------hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008093 313 WEGIKKSRSIRDFDSHATCLVG--KFETVDTYYR------NCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANK 384 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~--g~~~~~~yy~------~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~ 384 (578)
+... .....+...+..... ........+. .......+.+|++|+|+|+|++|++++. .... ..+..+
T Consensus 1520 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~-~a~~-~~~~i~ 1594 (1655)
T PLN02980 1520 WKSL---RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQ-IAQK-MYREIG 1594 (1655)
T ss_pred hhhh---ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHH-HHHH-HHHHcc
Confidence 0000 000000000000000 0000001111 1112246889999999999999998752 2221 222222
Q ss_pred ------------CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 385 ------------NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 385 ------------~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+++++++++||+.++|. | ..+.+.|.+||+....+
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~--P--e~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLEN--P--LPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHC--H--HHHHHHHHHHHHhcccc
Confidence 268999999999999993 3 36999999999986544
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.67 E-value=9.7e-16 Score=139.53 Aligned_cols=144 Identities=19% Similarity=0.266 Sum_probs=110.4
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGh 240 (578)
+||++||++++ ...| ..+++.++++||.|+++|+||+|.+. ..+++.++++.+.+. .+..+++++||
T Consensus 1 ~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGS-RRDY-QPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTT-THHH-HHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCC-HHHH-HHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 48999999664 4455 78999999999999999999999862 224777888876443 35679999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|+||.+++.++.++ . +++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~-~--~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-P--RVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-T--TESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-c--ceeEEEEecCccc-------------------------------------------------
Confidence 99999999999987 4 6999999976210
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
...+.+.++|+++++|++|++++.+...........+.++.++++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112234559999999999999887665544445578999999999995
No 59
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=3.2e-16 Score=157.83 Aligned_cols=243 Identities=17% Similarity=0.204 Sum_probs=148.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
...|+++++||+.|+. ..| +.+...|++. |-.++++|.|.||.|+......|. ..++|+..+++..+..+...++.
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCC-CCH-HHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCce
Confidence 5678899999998754 667 8888888764 789999999999999877665544 46789999999887655567899
Q ss_pred EEEEchHH-HHHHHHHhhcCCCCCccEEEEEcC-CcchhhhhHHHhhHHHHHHHHHHHH----HhHHHHHhhhccccccc
Q 008093 237 AIGTSIGA-NILVKYLGEEGEKTPVAGAAAICS-PWDLLIGDRFIGRRLIQKIYDRALT----IGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 237 lvGhSmGG-~ial~ya~~~p~~~~V~~~Vlis~-p~d~~~~~~~l~~~~~~~~~~~~l~----~~l~~~~~~~~~~l~~~ 310 (578)
++|||||| -+++.+....|+ .+..++++.. |.-..... ......+..+...-.. .+.+...+....
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~-~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~----- 198 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSY-GEYRELIKAMIQLDLSIGVSRGRKEALKSLIE----- 198 (315)
T ss_pred ecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCccc-chHHHHHHHHHhccccccccccHHHHHHHHHH-----
Confidence 99999999 666666677777 6777777663 42111100 0000000000000000 000000000000
Q ss_pred CCHHHHhccCCHHHHHhhhhh--ccCC-------CCCHHHHHHh---CCccccc--CCCccceEEEEeCCCCCCCCCCcc
Q 008093 311 ANWEGIKKSRSIRDFDSHATC--LVGK-------FETVDTYYRN---CSSSTYV--GNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 311 ~d~~~i~~~~s~~efd~~~~~--~~~g-------~~~~~~yy~~---~s~~~~l--~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
+.....+++|...-.. +..+ ..++.+.+.. .+....+ ..-..|+|++.|.++++++.+..+
T Consensus 199 -----~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~ 273 (315)
T KOG2382|consen 199 -----VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYP 273 (315)
T ss_pred -----HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHH
Confidence 0111111122111111 0000 0122222222 2222233 556899999999999999998776
Q ss_pred hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 377 WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 377 ~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
. .....|++++..++++||+.++|. |+ .+.+.|.+|++..
T Consensus 274 ~-~~~~fp~~e~~~ld~aGHwVh~E~--P~--~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 274 R-MEKIFPNVEVHELDEAGHWVHLEK--PE--EFIESISEFLEEP 313 (315)
T ss_pred H-HHHhccchheeecccCCceeecCC--HH--HHHHHHHHHhccc
Confidence 5 456678899999999999999993 44 5889999998753
No 60
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.64 E-value=2.4e-16 Score=146.57 Aligned_cols=228 Identities=14% Similarity=0.117 Sum_probs=148.1
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
.|++++|.-|++...| ......+.+. -+.++++|.||+|.|..+..++-..-+.+|...+++-++.. .-.++.++|+
T Consensus 44 ~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGW 121 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGW 121 (277)
T ss_pred eeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeee
Confidence 5889999989888877 4444444443 49999999999999977655443344567888888766543 3468999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|=||..++..|+++++ .|..+|..+...-.........+.. +-.+++....-+. +...+..+.+. +
T Consensus 122 SdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgi--Rdv~kWs~r~R~P--------~e~~Yg~e~f~--~ 187 (277)
T KOG2984|consen 122 SDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGI--RDVNKWSARGRQP--------YEDHYGPETFR--T 187 (277)
T ss_pred cCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhch--HHHhhhhhhhcch--------HHHhcCHHHHH--H
Confidence 9999999999999998 7888887775432222111111110 0001111111111 11111111110 1
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhC---CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
...+|.+. +.+++..+ -|...+++|+||+|++||+.||+|+...+.+ .....+..++.+.+.|+|.
T Consensus 188 ~wa~wvD~----------v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~f-i~~~~~~a~~~~~peGkHn 256 (277)
T KOG2984|consen 188 QWAAWVDV----------VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCF-IPVLKSLAKVEIHPEGKHN 256 (277)
T ss_pred HHHHHHHH----------HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccc-hhhhcccceEEEccCCCcc
Confidence 11122221 11222222 2557899999999999999999999998876 4456678899999999999
Q ss_pred ccccccccCcccHHHHHHHHHHh
Q 008093 398 AFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 398 ~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.++.- ..|+++.+.|||+.
T Consensus 257 ~hLry----a~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 257 FHLRY----AKEFNKLVLDFLKS 275 (277)
T ss_pred eeeec----hHHHHHHHHHHHhc
Confidence 88872 23899999999985
No 61
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.63 E-value=7.6e-15 Score=163.92 Aligned_cols=133 Identities=16% Similarity=0.183 Sum_probs=104.3
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
|++.||..+..+++.|.+ ....|+||++||++.... ..+.......++++||.|+++|+||+|.
T Consensus 1 i~~~DG~~L~~~~~~P~~--------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG--------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred CcCCCCCEEEEEEEecCC--------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecccccc
Confidence 467899999999987743 246799999999965432 1122234567889999999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|+....... ....+|+.++++++.++ ..+.+++++|+||||.+++.++..+++ .++++|..++..+...
T Consensus 67 S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 67 SEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYR 136 (550)
T ss_pred CCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhH
Confidence 986533222 45678999999999876 345689999999999999999998887 8999999988877654
No 62
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.63 E-value=1.4e-14 Score=154.23 Aligned_cols=256 Identities=14% Similarity=0.029 Sum_probs=135.6
Q ss_pred CCCcEEEEECCCCCCCcc-----------HHHHHHHH---HHHhCCceEEEEeCCCCCCCC-------CC------CCCC
Q 008093 158 DTTPIAIVIPGLTSDSAA-----------SYIRHLVF---NTAKRGWNVVVSNHRGLGGVS-------IT------SDCF 210 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~-----------~yi~~l~~---~l~~~Gy~Vvv~D~RG~G~S~-------~~------~~~~ 210 (578)
...++||++|+++|+++. .|+..++- .+--..|.|+++|..|-|.|. ++ +.+.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345889999999986532 23244432 233456999999999965421 10 0111
Q ss_pred C----CCCchHHHHHHHHHHHHHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhh-HHHhhHHH
Q 008093 211 Y----NAGWTEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD-RFIGRRLI 284 (578)
Q Consensus 211 ~----~~~~~~Dl~~~i~~l~~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~-~~l~~~~~ 284 (578)
+ ..-..+|+.+.+..+.+..+..++. ++||||||++++.++.++|+ +|.++|++++........ ..+.....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecCCCCChhHHHHHHHHHH
Confidence 1 1112356666555555666677776 99999999999999999999 899999998755432211 11111000
Q ss_pred HHHHHH-------H-----HHHhHHHH------H----hhhccccccc----CCH-HHHhccCCHHHHHhhhhhccCCCC
Q 008093 285 QKIYDR-------A-----LTIGLQDY------A----QLHEPRYSRL----ANW-EGIKKSRSIRDFDSHATCLVGKFE 337 (578)
Q Consensus 285 ~~~~~~-------~-----l~~~l~~~------~----~~~~~~l~~~----~d~-~~i~~~~s~~efd~~~~~~~~g~~ 337 (578)
..+... + -..++... . ......+.+. .+. ........+..+.+....+.....
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 000000 0 00000000 0 0000000000 000 000000011111111110101111
Q ss_pred CHHHHH------HhC-------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcC----CCEEEEEeCC-CCcccc
Q 008093 338 TVDTYY------RNC-------SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRAN----KNVVLATTWH-GGHLAF 399 (578)
Q Consensus 338 ~~~~yy------~~~-------s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~----~~~~l~~~~~-GGH~~~ 399 (578)
+..+|. ... +....+.+|++|+|+|+|++|.++|.+..... .+.. +++++.+++. .||+.+
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~l-a~~lp~~~~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKM-VDILQKQGKYAEVYEIESINGHMAG 370 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHH-HHHhhhcCCCeEEEEECCCCCcchh
Confidence 111111 111 12346778999999999999999998754432 2222 4789999985 899999
Q ss_pred ccccccCcccHHHHHHHHHHh
Q 008093 400 FEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 400 ~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+|. +..+.+.|.+||++
T Consensus 371 le~----p~~~~~~I~~FL~~ 387 (389)
T PRK06765 371 VFD----IHLFEKKIYEFLNR 387 (389)
T ss_pred hcC----HHHHHHHHHHHHcc
Confidence 983 33588999999864
No 63
>PRK11071 esterase YqiA; Provisional
Probab=99.62 E-value=5.8e-15 Score=142.18 Aligned_cols=184 Identities=14% Similarity=0.061 Sum_probs=111.4
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
|+||++||++++..++....+...+.+ .+|+|+++|+||+| +|+.+.+..+.++.+..+++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 569999999776666553345556654 37999999999985 2344555555555666789999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhc
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~ 318 (578)
||||||.+++.++.+++. .+|+++++.+.... + ...+ ....... ..+
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~---~---------~~~~--------~~~~~~~----~~~---- 113 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVRPFEL---L---------TDYL--------GENENPY----TGQ---- 113 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHH---H---------HHhc--------CCccccc----CCC----
Confidence 999999999999999874 35788887652110 0 0000 0000000 000
Q ss_pred cCCHHHHHhhhhhccCCCCCHHHHHHhCC--cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 319 SRSIRDFDSHATCLVGKFETVDTYYRNCS--SSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 319 ~~s~~efd~~~~~~~~g~~~~~~yy~~~s--~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
.+.-..+++.+.. ....+. ..+|+++|+|.+|.++|.+....... +..+.++++|+|
T Consensus 114 ----------------~~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggdH 172 (190)
T PRK11071 114 ----------------QYVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGNH 172 (190)
T ss_pred ----------------cEEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCCc
Confidence 0000011111110 112233 67888999999999999885543222 345667799999
Q ss_pred cccccccccCcccHHHHHHHHHH
Q 008093 397 LAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 397 ~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.- .+ ...+.+.+.+|+.
T Consensus 173 ~f--~~----~~~~~~~i~~fl~ 189 (190)
T PRK11071 173 AF--VG----FERYFNQIVDFLG 189 (190)
T ss_pred ch--hh----HHHhHHHHHHHhc
Confidence 53 21 1236677888864
No 64
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.61 E-value=1.4e-14 Score=146.16 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=87.6
Q ss_pred CCcEEEEECCCCCCCc--cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEE
Q 008093 159 TTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~--~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 236 (578)
.+|+||++||+++... ...+..+++.|+++||+|+++|+||||.|+..........+.+|+.++++++++. +..+++
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 4688999999954322 1223667889999999999999999999875432221234678999999999875 467899
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++||||||.+++.++.++++ .++++|++++....
T Consensus 103 LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred EEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 99999999999999999887 79999999876543
No 65
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.60 E-value=3.4e-14 Score=160.56 Aligned_cols=246 Identities=17% Similarity=0.079 Sum_probs=159.4
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.+...+...||.++....+.|.+.. ...+-|+||++||-...............++.+||.|+.+|+
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~-----------~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~ 431 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFD-----------PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNY 431 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCC-----------CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCC
Confidence 455777888899999986555553310 012249999999975333332236677888999999999999
Q ss_pred CCCCCCCCC----CCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 198 RGLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 198 RG~G~S~~~----~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
||.++-... ...-+.....+|+.+.++++.+.- ...++.++|+|+||.+++..+...+. ++++++..++.+
T Consensus 432 RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~~~ 508 (620)
T COG1506 432 RGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGGVD 508 (620)
T ss_pred CCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCcch
Confidence 986553111 112233455689999999664432 23589999999999999999988774 778877766543
Q ss_pred hhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccc
Q 008093 272 LLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTY 351 (578)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~ 351 (578)
-....... . ..+ ...+ +.. ..+...-.++|...|+...
T Consensus 509 ~~~~~~~~-------------~-----------~~~--~~~~------------~~~----~~~~~~~~~~~~~~sp~~~ 546 (620)
T COG1506 509 WLLYFGES-------------T-----------EGL--RFDP------------EEN----GGGPPEDREKYEDRSPIFY 546 (620)
T ss_pred hhhhcccc-------------c-----------hhh--cCCH------------HHh----CCCcccChHHHHhcChhhh
Confidence 21100000 0 000 0000 000 0010003467778899999
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.+|++|+|+|||.+|..||.+.... .+.....+++++++++.||-.--. .+...+.+.+.+|+++..
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKRHL 617 (620)
T ss_pred hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999874332 344567889999999999954332 122345677888887654
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.60 E-value=4.8e-15 Score=145.01 Aligned_cols=196 Identities=21% Similarity=0.214 Sum_probs=127.2
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhh
Q 008093 180 HLVFNTAKRGWNVVVSNHRGLGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 180 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
.....|+++||.|+.+|+||.++....- .........+|+.++++++.+++ +..++.++|+|+||.+++..+..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4566788999999999999987542110 11111234589999999998876 35689999999999999999998
Q ss_pred cCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhcc
Q 008093 254 EGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLV 333 (578)
Q Consensus 254 ~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~ 333 (578)
+++ .++++|+.++..|.......... +... ++...
T Consensus 85 ~~~--~f~a~v~~~g~~d~~~~~~~~~~------~~~~--------------------------------~~~~~----- 119 (213)
T PF00326_consen 85 HPD--RFKAAVAGAGVSDLFSYYGTTDI------YTKA--------------------------------EYLEY----- 119 (213)
T ss_dssp TCC--GSSEEEEESE-SSTTCSBHHTCC------HHHG--------------------------------HHHHH-----
T ss_pred cce--eeeeeeccceecchhcccccccc------cccc--------------------------------ccccc-----
Confidence 888 89999999988876543211000 0000 00000
Q ss_pred CCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCCCcc---hHHHhcCCCEEEEEeCCCCccccccccccCcc
Q 008093 334 GKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVEAIP---WDECRANKNVVLATTWHGGHLAFFEGLTAAGM 408 (578)
Q Consensus 334 ~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~g~dDpivp~~~~~---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~ 408 (578)
.......+.|+..++...+.+ +++|+|++||++|+.||.+... ..+.+...++++.+++++|| ++... ....
T Consensus 120 ~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~~--~~~~ 196 (213)
T PF00326_consen 120 GDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGNP--ENRR 196 (213)
T ss_dssp SSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTSH--HHHH
T ss_pred CccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCCc--hhHH
Confidence 000012233344445556666 8999999999999999987332 23455667799999999999 33321 1223
Q ss_pred cHHHHHHHHHHhhcC
Q 008093 409 WWVRAVNEYLGVLHS 423 (578)
Q Consensus 409 w~~~~v~eFL~~~~~ 423 (578)
.+.+.+.+|+++.++
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 567899999987654
No 67
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.58 E-value=4.8e-14 Score=154.55 Aligned_cols=234 Identities=12% Similarity=0.116 Sum_probs=132.6
Q ss_pred CCcEEEEECCCCCCCccHHH---HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCCCc
Q 008093 159 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi---~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~~~ 234 (578)
.++.||++||+.+...-.-+ +.+++.|.++||+|+++|+||+|.+..... ...+. +++.++++.+.+..+..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcCCCC
Confidence 34568899998432221101 379999999999999999999998743211 11233 568889999988888889
Q ss_pred EEEEEEchHHHHHH----HHHhhc-CCCCCccEEEEEcCCcchhhhhH---HHhhHHHHHHHHHHHHH-------hHHHH
Q 008093 235 LFAIGTSIGANILV----KYLGEE-GEKTPVAGAAAICSPWDLLIGDR---FIGRRLIQKIYDRALTI-------GLQDY 299 (578)
Q Consensus 235 i~lvGhSmGG~ial----~ya~~~-p~~~~V~~~Vlis~p~d~~~~~~---~l~~~~~~~~~~~~l~~-------~l~~~ 299 (578)
++++||||||.++. .+++.. ++ +|+++++++++.|+..... ++....+.. .++.+.. .+...
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~~Df~~~G~l~~f~~~~~~~~-~e~~~~~~G~lpg~~m~~~ 340 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTLLDFSDPGELGVFVDEEIVAG-IERQNGGGGYLDGRQMAVT 340 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecCcCCCCcchhhhhcCchhHHH-HHHHHHhcCCCCHHHHHHH
Confidence 99999999999863 244444 44 7999999999988754311 111110000 0010000 00000
Q ss_pred HhhhcccccccCCHH----HHhccCCHHHHHhhh----hhccCC--C-CCHHHHHHhCC----------cccccCCCccc
Q 008093 300 AQLHEPRYSRLANWE----GIKKSRSIRDFDSHA----TCLVGK--F-ETVDTYYRNCS----------SSTYVGNVSIP 358 (578)
Q Consensus 300 ~~~~~~~l~~~~d~~----~i~~~~s~~efd~~~----~~~~~g--~-~~~~~yy~~~s----------~~~~l~~I~vP 358 (578)
+....+. ..-|. .....+....||-.+ ...+.+ + ..+.++|.+.. ....+.+|++|
T Consensus 341 F~~lrp~---~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vP 417 (532)
T TIGR01838 341 FSLLREN---DLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVP 417 (532)
T ss_pred HHhcChh---hHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCC
Confidence 0000000 00000 000000000111000 000000 0 01122233322 22467889999
Q ss_pred eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008093 359 LLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402 (578)
Q Consensus 359 vLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg 402 (578)
+|+|.|++|.++|.+.... .....++....+++++||+.+++.
T Consensus 418 vLvV~G~~D~IvP~~sa~~-l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 418 VYIIATREDHIAPWQSAYR-GAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred EEEEeeCCCCcCCHHHHHH-HHHHCCCCEEEEECCCCCchHhhC
Confidence 9999999999999875543 334456778889999999999885
No 68
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.56 E-value=1.5e-13 Score=143.93 Aligned_cols=240 Identities=18% Similarity=0.175 Sum_probs=134.1
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+.++..|+..+ ++|......|+. +.+.|+||++.|+- +-.+.+.+.+.+.+..+|+.++++|.
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~--------------~~p~P~VIv~gGlD-s~qeD~~~l~~~~l~~rGiA~LtvDm 226 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG--------------EKPYPTVIVCGGLD-SLQEDLYRLFRDYLAPRGIAMLTVDM 226 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS--------------SS-EEEEEEE--TT-S-GGGGHHHHHCCCHHCT-EEEEE--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC--------------CCCCCEEEEeCCcc-hhHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 345777777766 777765555432 35779999999994 45555435566678899999999999
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 198 RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
||.|.|.... ...+...-..++++++...- +..+|.++|.|+||+++.+.|.-+++ +|+|+|+.+++.+-.-.
T Consensus 227 PG~G~s~~~~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 227 PGQGESPKWP---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFT 301 (411)
T ss_dssp TTSGGGTTT----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH
T ss_pred CCCcccccCC---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhc
Confidence 9999985321 11111233457888887642 35689999999999999999987766 89999999998644332
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc--ccc-
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS--TYV- 352 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~--~~l- 352 (578)
........ ...|...++..+... ..+...+.... . ..|.. ..+
T Consensus 302 ~~~~~~~~-P~my~d~LA~rlG~~-------------------~~~~~~l~~el----~----------~~SLk~qGlL~ 347 (411)
T PF06500_consen 302 DPEWQQRV-PDMYLDVLASRLGMA-------------------AVSDESLRGEL----N----------KFSLKTQGLLS 347 (411)
T ss_dssp -HHHHTTS--HHHHHHHHHHCT-S-------------------CE-HHHHHHHG----G----------GGSTTTTTTTT
T ss_pred cHHHHhcC-CHHHHHHHHHHhCCc-------------------cCCHHHHHHHH----H----------hcCcchhcccc
Confidence 22111111 122222222111000 00011111110 0 01111 123
Q ss_pred -CCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC-ccccccccccCcccHHHHHHHHHHhh
Q 008093 353 -GNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGG-HLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 353 -~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG-H~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
.+.++|+|.+++++|+++|.+.... .+..+.+.+...++.+. |.||.. ....+.+||+..
T Consensus 348 ~rr~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~--------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 348 GRRCPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ--------ALDEIYKWLEDK 409 (411)
T ss_dssp SS-BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH--------HHHHHHHHHHHH
T ss_pred CCCCCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH--------HHHHHHHHHHHh
Confidence 6678999999999999999876543 34555556666666555 888765 456777787754
No 69
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.55 E-value=1.9e-13 Score=162.65 Aligned_cols=256 Identities=15% Similarity=0.151 Sum_probs=138.2
Q ss_pred CCcEEEEECCCCCCCccHHHHH-----HHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHH---HHHC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRH-----LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYL---HHEY 230 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~-----l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l---~~~~ 230 (578)
.+|+||++||+.+ +...| +. ++..|.++||+|+++|+ |.++.. ...+..+..+++..+++.+ +...
T Consensus 66 ~~~plllvhg~~~-~~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~-~~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMM-SADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKV-EGGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCC-Cccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChh-HcCccCCHHHHHHHHHHHHHHHHHhh
Confidence 4577999999954 44434 32 47889999999999995 544332 1112234445555444444 3332
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-HHhhH--------HHHHHHHH------HHHHh
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-FIGRR--------LIQKIYDR------ALTIG 295 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~-~l~~~--------~~~~~~~~------~l~~~ 295 (578)
..+++++||||||.+++.|++.++++ +|+++|++++|.|+..... .+... ....+... .....
T Consensus 140 -~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 217 (994)
T PRK07868 140 -GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTG 217 (994)
T ss_pred -CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHH
Confidence 35899999999999999998865432 7999999999987643210 00000 00000000 00000
Q ss_pred HH-----HHHhhhcccccccCCHHHHhccCCHHHHHhhhhh-ccCC--CC-CHHHHHHhCCc----------ccccCCCc
Q 008093 296 LQ-----DYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATC-LVGK--FE-TVDTYYRNCSS----------STYVGNVS 356 (578)
Q Consensus 296 l~-----~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~-~~~g--~~-~~~~yy~~~s~----------~~~l~~I~ 356 (578)
++ .........+....+.+.........+|...... ...| +. .+..++..... ...+.+|+
T Consensus 218 ~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 218 FQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred HHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 00 0000000000001111111000001111100000 0000 11 12233322111 12478999
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEE-EEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVL-ATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l-~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
+|+|+|+|++|+++|++.... .....++..+ .+++++||++++-|....+ .+...+.+||.+....
T Consensus 298 ~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~-~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQ-QTWPTVADWVKWLEGD 364 (994)
T ss_pred CCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhh-hhChHHHHHHHHhccC
Confidence 999999999999999886554 3445677776 6789999999998754433 3457899999986443
No 70
>PLN00021 chlorophyllase
Probab=99.53 E-value=5.2e-13 Score=138.21 Aligned_cols=115 Identities=19% Similarity=0.175 Sum_probs=84.1
Q ss_pred EEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCC
Q 008093 132 MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY 211 (578)
Q Consensus 132 ~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~ 211 (578)
.+.++++.|.. ....|+||++||+.+ ....| ..+++.++++||.|+++|++|++...
T Consensus 38 ~~p~~v~~P~~--------------~g~~PvVv~lHG~~~-~~~~y-~~l~~~Las~G~~VvapD~~g~~~~~------- 94 (313)
T PLN00021 38 PKPLLVATPSE--------------AGTYPVLLFLHGYLL-YNSFY-SQLLQHIASHGFIVVAPQLYTLAGPD------- 94 (313)
T ss_pred CceEEEEeCCC--------------CCCCCEEEEECCCCC-CcccH-HHHHHHHHhCCCEEEEecCCCcCCCC-------
Confidence 45667776643 245799999999965 45556 78899999999999999999975321
Q ss_pred CCCchHHHHHHHHHHHHHC----------CCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCC
Q 008093 212 NAGWTEDAREVIGYLHHEY----------PKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSP 269 (578)
Q Consensus 212 ~~~~~~Dl~~~i~~l~~~~----------~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p 269 (578)
.....+|..++++++.... ...+++++||||||.+++.++..+++. .+++++|++++.
T Consensus 95 ~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 95 GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 1123456777777776421 225799999999999999999887642 268888888654
No 71
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.51 E-value=2.4e-13 Score=126.42 Aligned_cols=176 Identities=20% Similarity=0.259 Sum_probs=131.6
Q ss_pred CCCcEEEEECC---CCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHG---l~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
+.+|+.|+||= ++|+....-+..+++.|.++||.|+.+|+||-|+|.++-+ ...|..+|..++++|++.++|+.+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD--~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD--NGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc--CCcchHHHHHHHHHHHHhhCCCch
Confidence 67899999984 3344455556788999999999999999999999986532 335788999999999999999888
Q ss_pred E-EEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 235 L-FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 235 i-~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
. .+.|+|+||.|++..|.+.++ ....+++.++.+.. +
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~---------------d------------------------ 141 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAY---------------D------------------------ 141 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCch---------------h------------------------
Confidence 7 788899999999999999877 45566665554210 0
Q ss_pred HHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008093 314 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWH 393 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 393 (578)
...+.....|.++|+|+.|.+++....-. ........++++++
T Consensus 142 -----------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~--~~~~~~~~~i~i~~ 184 (210)
T COG2945 142 -----------------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLK--WQESIKITVITIPG 184 (210)
T ss_pred -----------------------------------hhhccCCCCCceeEecChhhhhcHHHHHH--hhcCCCCceEEecC
Confidence 01234456899999999998888763322 22336677888999
Q ss_pred CCccccccccccCcccHHHHHHHHHH
Q 008093 394 GGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 394 GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
++|+-+-. -..+.+.+.+|+.
T Consensus 185 a~HFF~gK-----l~~l~~~i~~~l~ 205 (210)
T COG2945 185 ADHFFHGK-----LIELRDTIADFLE 205 (210)
T ss_pred CCceeccc-----HHHHHHHHHHHhh
Confidence 99954322 1247788999985
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.51 E-value=1.5e-12 Score=133.33 Aligned_cols=215 Identities=15% Similarity=0.141 Sum_probs=126.2
Q ss_pred eEEEEEec-CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeC
Q 008093 121 RRQLFRLS-DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 121 ~r~~l~~~-DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~ 197 (578)
++..+..+ -|..+.+..+.|+.. .....|+|+++||++|+. ..|.. .+...+...||.|+++|.
T Consensus 19 ~~~~~~s~~l~~~~~~~vy~P~~~------------~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~ 85 (283)
T PLN02442 19 RRYKHFSSTLGCSMTFSVYFPPAS------------DSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDT 85 (283)
T ss_pred EEEEEeccccCCceEEEEEcCCcc------------cCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCC
Confidence 33334333 356677766666421 124679999999996644 33422 234566678999999998
Q ss_pred CCCCCC-CCC--------CCCCC-----------C--CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 198 RGLGGV-SIT--------SDCFY-----------N--AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 198 RG~G~S-~~~--------~~~~~-----------~--~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
.++|.- ... ....| . ....+++..+++......+..+++++||||||..++.++.++|
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p 165 (283)
T PLN02442 86 SPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP 165 (283)
T ss_pred CCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc
Confidence 776611 000 00001 0 0112444444444333345578999999999999999999998
Q ss_pred CCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCC
Q 008093 256 EKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK 335 (578)
Q Consensus 256 ~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g 335 (578)
+ .+++++++++..+..... .. ...... +.. .+ ..++.+
T Consensus 166 ~--~~~~~~~~~~~~~~~~~~-~~-----~~~~~~--------~~g---------~~---------~~~~~~-------- 203 (283)
T PLN02442 166 D--KYKSVSAFAPIANPINCP-WG-----QKAFTN--------YLG---------SD---------KADWEE-------- 203 (283)
T ss_pred h--hEEEEEEECCccCcccCc-hh-----hHHHHH--------HcC---------CC---------hhhHHH--------
Confidence 8 899999998876643111 00 000000 000 00 000000
Q ss_pred CCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC----cchHHHhcCCCEEEEEeCCCCcc
Q 008093 336 FETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA----IPWDECRANKNVVLATTWHGGHL 397 (578)
Q Consensus 336 ~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~----~~~~~~~~~~~~~l~~~~~GGH~ 397 (578)
+...+....+...++|+++++|++|++++... +.....+...++++.++++++|-
T Consensus 204 -------~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 204 -------YDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred -------cChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 11222334455678999999999999998631 22223455667899999999994
No 73
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.51 E-value=3e-13 Score=142.66 Aligned_cols=286 Identities=17% Similarity=0.202 Sum_probs=177.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH----HHHHHHHHhCCceE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWNV 192 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi----~~l~~~l~~~Gy~V 192 (578)
..+.+.+.+++.||..+.+.-...+ ...+|+|++.||+.++|..+.. +.++..|+++||.|
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~---------------~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDV 109 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG---------------KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDV 109 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC---------------CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCce
Confidence 4677999999999998887765432 1678999999999877665432 45777899999999
Q ss_pred EEEeCCCCCCCCC-------CCCCCCCCCch----HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC-CCCc
Q 008093 193 VVSNHRGLGGVSI-------TSDCFYNAGWT----EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPV 260 (578)
Q Consensus 193 vv~D~RG~G~S~~-------~~~~~~~~~~~----~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V 260 (578)
..-|.||--.|.. ....++...|. .|+.++|+++.+..+..+++.||||.|+.+...++.+.|+ +.+|
T Consensus 110 WLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 110 WLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred eeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhh
Confidence 9999999555421 12234444443 4999999999999888999999999999999999988865 2369
Q ss_pred cEEEEEcCCcchhhhhHHHhhHH-------------------------HHHHHHHH-----HHHhHHHHHhhhccccccc
Q 008093 261 AGAAAICSPWDLLIGDRFIGRRL-------------------------IQKIYDRA-----LTIGLQDYAQLHEPRYSRL 310 (578)
Q Consensus 261 ~~~Vlis~p~d~~~~~~~l~~~~-------------------------~~~~~~~~-----l~~~l~~~~~~~~~~l~~~ 310 (578)
+.+++++|..-.......+.... .+.+.... +...+....-.. +. .
T Consensus 190 ~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~---~~-G 265 (403)
T KOG2624|consen 190 KSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFL---LV-G 265 (403)
T ss_pred heeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHH---Hc-C
Confidence 99999988653221100000000 00010100 000000000000 00 0
Q ss_pred CCHHHH------------hcc---CCHHHHHhhhhh---ccCCCC---CHHHHHHhCCcccccCCCccceEEEEeCCCCC
Q 008093 311 ANWEGI------------KKS---RSIRDFDSHATC---LVGKFE---TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPV 369 (578)
Q Consensus 311 ~d~~~i------------~~~---~s~~efd~~~~~---~~~g~~---~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpi 369 (578)
.+...+ ... +.+..|.+.... +.+.+. +...|-+...+...+.+|++|+.+.+|.+|-+
T Consensus 266 ~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l 345 (403)
T KOG2624|consen 266 WNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWL 345 (403)
T ss_pred cchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCccc
Confidence 000000 011 122222222111 112222 44455555566778999999999999999999
Q ss_pred CCCCCcchHHHhcCCCEE--EEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 370 CTVEAIPWDECRANKNVV--LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 370 vp~~~~~~~~~~~~~~~~--l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.++.+............ .+.+++=.|+.|+=|.... ..+.+.|++.++...
T Consensus 346 ~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~-~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 346 ADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAK-EEVYDPVIERLRLFE 399 (403)
T ss_pred CCHHHHHHHHHhcccccccccccCCCccceeeeeccCcH-HHHHHHHHHHHHhhh
Confidence 999877643333222222 2227888999999875443 367888888888654
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.50 E-value=7e-13 Score=129.55 Aligned_cols=106 Identities=21% Similarity=0.263 Sum_probs=78.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCC-CCchHHHHHHHHHHHHHCCCCcE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
...|+++++||. |.|.-.| ..++..+.. ...+|+++|+||||.+......... ..+..|+.++++++-... ..+|
T Consensus 72 t~gpil~l~HG~-G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGEL-PPQI 148 (343)
T ss_pred CCccEEEEeecC-cccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccC-CCce
Confidence 567999999998 6666666 667777664 4678999999999999876554333 455678888887776443 3479
Q ss_pred EEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 236 ~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
++|||||||.|+...|...--. .+.|++.|+
T Consensus 149 ilVGHSmGGaIav~~a~~k~lp-sl~Gl~viD 179 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLP-SLAGLVVID 179 (343)
T ss_pred EEEeccccchhhhhhhhhhhch-hhhceEEEE
Confidence 9999999999998776554221 488888885
No 75
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.49 E-value=3.7e-13 Score=126.77 Aligned_cols=220 Identities=16% Similarity=0.144 Sum_probs=139.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
..+.+||+|||+-++....++..++..+.+.||.++.+|++|.|.|+..-..-.....++|+..+++++.... ..--++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEEEEE
Confidence 4567899999998777778999999999999999999999999999865321111234599999999997642 112478
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhH-HHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHH
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR-FIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGI 316 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~-~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i 316 (578)
+|||-||.+++.|+.++.+ +.-+|-+++-+|....-. .+.+. ...+....++..+-.+.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~eRlg~~----~l~~ike~Gfid~~~rk------------- 169 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGINERLGED----YLERIKEQGFIDVGPRK------------- 169 (269)
T ss_pred EeecCccHHHHHHHHhhcC---chheEEcccccchhcchhhhhccc----HHHHHHhCCceecCccc-------------
Confidence 9999999999999999877 666776666666533210 11111 11111111110000000
Q ss_pred hccCCHHHHHhhhhhccCCCC-CHH--HHHHhCCcccccCCC--ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008093 317 KKSRSIRDFDSHATCLVGKFE-TVD--TYYRNCSSSTYVGNV--SIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATT 391 (578)
Q Consensus 317 ~~~~s~~efd~~~~~~~~g~~-~~~--~yy~~~s~~~~l~~I--~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~ 391 (578)
. -.+|. +.+ .+.-...+...-.+| +||+|-+||.+|.+||.+.... .++..++-.+.++
T Consensus 170 --G-------------~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake-fAk~i~nH~L~iI 233 (269)
T KOG4667|consen 170 --G-------------KYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE-FAKIIPNHKLEII 233 (269)
T ss_pred --C-------------CcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH-HHHhccCCceEEe
Confidence 0 00110 000 111112222233334 7999999999999999987654 5667788899999
Q ss_pred CCCCccccccccccCcccHHHHHHHHHH
Q 008093 392 WHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 392 ~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
+++.|.-... +........+|..
T Consensus 234 EgADHnyt~~-----q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 234 EGADHNYTGH-----QSQLVSLGLEFIK 256 (269)
T ss_pred cCCCcCccch-----hhhHhhhcceeEE
Confidence 9999964332 2234455555543
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.47 E-value=1.9e-12 Score=128.75 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=113.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-CCCC------CCCch-------HHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS-DCFY------NAGWT-------EDAREVI 223 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~-~~~~------~~~~~-------~Dl~~~i 223 (578)
+.+|+||++||+++ +...+ ..++..+.+.++.+.+++.+|........ ...+ ..... +++.+.+
T Consensus 14 ~~~~~vIlLHG~G~-~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 14 PAQQLLLLFHGVGD-NPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCcEEEEEeCCCC-ChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 56789999999954 55445 77889998888777788888764321110 1111 00111 2233445
Q ss_pred HHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHh
Q 008093 224 GYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQ 301 (578)
Q Consensus 224 ~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~ 301 (578)
+++..++ +..+++++|||+||.+++.++...++ .+.+++++++.+..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~----------------------------- 140 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYAS----------------------------- 140 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEecccccc-----------------------------
Confidence 5555554 34589999999999999998888776 56666655321100
Q ss_pred hhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---H
Q 008093 302 LHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---D 378 (578)
Q Consensus 302 ~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~ 378 (578)
+ ......++|++++||++|+++|.+.... .
T Consensus 141 -----~------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~ 173 (232)
T PRK11460 141 -----L------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEA 173 (232)
T ss_pred -----c------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHH
Confidence 0 0001136899999999999999875432 2
Q ss_pred HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 379 ECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 379 ~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+.....++++..++++||..--+ ..+.+.+||.+...
T Consensus 174 L~~~g~~~~~~~~~~~gH~i~~~--------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 174 LISLGGDVTLDIVEDLGHAIDPR--------LMQFALDRLRYTVP 210 (232)
T ss_pred HHHCCCCeEEEEECCCCCCCCHH--------HHHHHHHHHHHHcc
Confidence 23345678899999999965332 45677777776653
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.46 E-value=9.7e-12 Score=126.81 Aligned_cols=207 Identities=13% Similarity=0.103 Sum_probs=116.7
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH-H-HHHHHHhCCceEEEEeC--CCCCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR-H-LVFNTAKRGWNVVVSNH--RGLGGVS 204 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~-~-l~~~l~~~Gy~Vvv~D~--RG~G~S~ 204 (578)
.|..+.+.++.|+.. ...+.|+|+++||++++. ..|.. . +...+.+.||.|+++|. ||+|.+.
T Consensus 23 ~~~~~~~~v~~P~~~------------~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA------------AAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred cCCceEEEEEcCCCc------------cCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 455566666666431 023479999999996544 43422 2 22344457999999998 6665432
Q ss_pred CCC-------CCCC----------CCCchHHH-HHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 205 ITS-------DCFY----------NAGWTEDA-REVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 205 ~~~-------~~~~----------~~~~~~Dl-~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
... ...| ...+.+.+ .++...+.+.+ ...+++++||||||.+++.++.++|+ .+++++
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~ 167 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVS 167 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEE
Confidence 110 0000 00112232 23333444444 34589999999999999999999998 789999
Q ss_pred EEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHH
Q 008093 265 AICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYR 344 (578)
Q Consensus 265 lis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~ 344 (578)
++++..+..... .. . . .+..++.. +. . .+.. .+...+..
T Consensus 168 ~~~~~~~~~~~~-~~-----~----~----~~~~~l~~---------~~------~---~~~~---------~~~~~~~~ 206 (275)
T TIGR02821 168 AFAPIVAPSRCP-WG-----Q----K----AFSAYLGA---------DE------A---AWRS---------YDASLLVA 206 (275)
T ss_pred EECCccCcccCc-ch-----H----H----HHHHHhcc---------cc------c---chhh---------cchHHHHh
Confidence 988776542110 00 0 0 00111100 00 0 0000 00001100
Q ss_pred hCCcccccCCCccceEEEEeCCCCCCCCC-C---cchHHHhcCCCEEEEEeCCCCccc
Q 008093 345 NCSSSTYVGNVSIPLLCISSLDDPVCTVE-A---IPWDECRANKNVVLATTWHGGHLA 398 (578)
Q Consensus 345 ~~s~~~~l~~I~vPvLiI~g~dDpivp~~-~---~~~~~~~~~~~~~l~~~~~GGH~~ 398 (578)
. .+...|+++.+|++|++++.+ . +...+.+...++++.++++.+|--
T Consensus 207 ------~-~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f 257 (275)
T TIGR02821 207 ------D-GGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSY 257 (275)
T ss_pred ------h-cccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccc
Confidence 1 124679999999999999973 2 233345566778999999999943
No 78
>PRK10115 protease 2; Provisional
Probab=99.44 E-value=1.9e-12 Score=147.43 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=149.7
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.-++..++..||..|.+.+..+++.. .+...|+||++||..+.+....+......+.++||.|+..|.|
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-----------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R 483 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-----------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR 483 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-----------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC
Confidence 44556677889999998666654311 1245699999999777665433355566788999999999999
Q ss_pred CCCCCCCCC----CCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSITS----DCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
|-|+-...- .........+|+.++++++.++. ...++.+.|.|.||.++...+.++|+ .++++|+..+..|+
T Consensus 484 Gs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~ 561 (686)
T PRK10115 484 GGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDV 561 (686)
T ss_pred CCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhH
Confidence 976542110 01111134589999999998764 35689999999999999999999998 89999998888776
Q ss_pred hhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC---CCHHHHHHhCCcc
Q 008093 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTYYRNCSSS 349 (578)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~---~~~~~yy~~~s~~ 349 (578)
...... +.++ ....++.+ .|. +...+|+...|+.
T Consensus 562 ~~~~~~--------------------------~~~p-----------~~~~~~~e------~G~p~~~~~~~~l~~~SP~ 598 (686)
T PRK10115 562 VTTMLD--------------------------ESIP-----------LTTGEFEE------WGNPQDPQYYEYMKSYSPY 598 (686)
T ss_pred hhhccc--------------------------CCCC-----------CChhHHHH------hCCCCCHHHHHHHHHcCch
Confidence 421000 0000 00001111 111 1234567778999
Q ss_pred cccCCCccc-eEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEe---CCCCcc
Q 008093 350 TYVGNVSIP-LLCISSLDDPVCTVEAIPW---DECRANKNVVLATT---WHGGHL 397 (578)
Q Consensus 350 ~~l~~I~vP-vLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~---~~GGH~ 397 (578)
..+.+++.| +|+++|.+|+-||+..... .+.....+..++++ +++||-
T Consensus 599 ~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 599 DNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred hccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 999999999 5677999999999874332 22333444555566 899996
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.42 E-value=6.8e-12 Score=122.85 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=81.5
Q ss_pred CCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCCCCC------CCCCCCchHHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSITSD------CFYNAGWTEDAREVIGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~------~~~~~~~~~Dl~~~i~~l~~~ 229 (578)
...|+||++||.++ +...|.. .+...+.+.||.|+++|+||++.+..... .....+...|+.++++++.++
T Consensus 11 ~~~P~vv~lHG~~~-~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQ-TASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCC-CHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46799999999854 4444421 34555666899999999999876432110 011123467899999999888
Q ss_pred CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 230 YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 230 ~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
++ ..+++++||||||.+++.++.++++ .+.+++.++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 74 3589999999999999999999988 788888888654
No 80
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.41 E-value=5.9e-12 Score=122.51 Aligned_cols=101 Identities=14% Similarity=0.232 Sum_probs=69.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.|.++++||+.++...+. . ....+... .|+++++|+||||.|. . .......+.+|+..+++ ..+..++++
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-P-VFKVLPALAARYRVIAPDLRGHGRSD-P-AGYSLSAYADDLAALLD----ALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCCchhhhH-H-HHHHhhccccceEEEEecccCCCCCC-c-ccccHHHHHHHHHHHHH----HhCCCceEE
Confidence 457999999976555433 3 11222221 1999999999999987 1 10001111344444444 344456999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+||||||.+++.++..+|+ .+.++|+++++.
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~ 123 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAP 123 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCC
Confidence 9999999999999999998 899999999764
No 81
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.40 E-value=9.9e-13 Score=125.31 Aligned_cols=248 Identities=20% Similarity=0.236 Sum_probs=139.1
Q ss_pred EEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 123 ~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
..+..+||..+..+.+.... ..+--+++.|-+|-....| +.++..++++||.|+.+|+||.|.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~----------------~~~g~~~va~a~Gv~~~fY-RrfA~~a~~~Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG----------------KASGRLVVAGATGVGQYFY-RRFAAAAAKAGFEVLTFDYRGIGQ 70 (281)
T ss_pred cccccCCCccCccccccCCC----------------CCCCcEEecccCCcchhHh-HHHHHHhhccCceEEEEecccccC
Confidence 45678899999877765422 2222345555556445444 999999999999999999999999
Q ss_pred CCCCCCCCCC---CCch-HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC--Ccchhhhh
Q 008093 203 VSITSDCFYN---AGWT-EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS--PWDLLIGD 276 (578)
Q Consensus 203 S~~~~~~~~~---~~~~-~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~--p~d~~~~~ 276 (578)
|..+...-.. .+|. .|+.++++.+++..+..+.+.|||||||.+... +++++ ++.+....+. .|.....
T Consensus 71 S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL-~~~~~---k~~a~~vfG~gagwsg~m~- 145 (281)
T COG4757 71 SRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGL-LGQHP---KYAAFAVFGSGAGWSGWMG- 145 (281)
T ss_pred CCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecc-cccCc---ccceeeEeccccccccchh-
Confidence 9776544222 2343 699999999999888999999999999987753 44443 2434333332 2211110
Q ss_pred HHHhhHHHHHHHHHHHHHhHHHHHhhhcc-cccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCC
Q 008093 277 RFIGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (578)
Q Consensus 277 ~~l~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (578)
..++.....+++ +......+.+...+ .+....+ -....-+++|......+..-|.+...- ......+++
T Consensus 146 -~~~~l~~~~l~~--lv~p~lt~w~g~~p~~l~G~G~---d~p~~v~RdW~RwcR~p~y~fddp~~~----~~~q~yaaV 215 (281)
T COG4757 146 -LRERLGAVLLWN--LVGPPLTFWKGYMPKDLLGLGS---DLPGTVMRDWARWCRHPRYYFDDPAMR----NYRQVYAAV 215 (281)
T ss_pred -hhhcccceeecc--ccccchhhccccCcHhhcCCCc---cCcchHHHHHHHHhcCccccccChhHh----HHHHHHHHh
Confidence 000000000000 00000000000000 0000000 011233455554443332323221110 012345678
Q ss_pred ccceEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCC----Cccccccc
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWD-ECRANKNVVLATTWHG----GHLAFFEG 402 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~-~~~~~~~~~l~~~~~G----GH~~~~eg 402 (578)
++|+.++...||+.+|+.+.... ..-.+..++...++.. ||++++..
T Consensus 216 rtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~ 267 (281)
T COG4757 216 RTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFRE 267 (281)
T ss_pred cCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhcc
Confidence 99999999999999998865532 2234445555555544 99999974
No 82
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.40 E-value=9.2e-13 Score=134.10 Aligned_cols=130 Identities=18% Similarity=0.161 Sum_probs=92.6
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHH--HH------HHHHhCCceEEEEeCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH--LV------FNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~--l~------~~l~~~Gy~Vvv~D~RG~ 200 (578)
||.+|+.|.+.| .. ......|+||..|++..+.....-.. .. ..++++||.||+.|.||.
T Consensus 1 DGv~L~adv~~P-~~-----------~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~ 68 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-----------DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGT 68 (272)
T ss_dssp TS-EEEEEEEEE--------------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS
T ss_pred CCCEEEEEEEec-CC-----------CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCccc
Confidence 899999999988 21 11467799999999954331111011 01 128899999999999999
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 201 G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|.|++..... .....+|..++|+++.++ | +.+|.++|.|++|...+..|+..+. .+++++..++..|...
T Consensus 69 g~S~G~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 69 GGSEGEFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TTS-S-B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred ccCCCccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 9998764332 334568999999999887 5 4589999999999999999997777 7999999998887765
No 83
>PRK10162 acetyl esterase; Provisional
Probab=99.38 E-value=3.1e-11 Score=125.71 Aligned_cols=247 Identities=11% Similarity=0.024 Sum_probs=138.1
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHh-CCceEEE
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVV 194 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv 194 (578)
+.-+...+...+| .+.++++.|.. ...|+||++||.+ .++...+ ..++..+++ .|+.|+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~---------------~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~ 117 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP---------------DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIG 117 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC---------------CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEE
Confidence 3334445666666 58889988732 3468999999943 1233334 456677766 5999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH---C--CCCcEEEEEEchHHHHHHHHHhhcCC----CCCccEEEE
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAA 265 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvGhSmGG~ial~ya~~~p~----~~~V~~~Vl 265 (578)
+|||.....+ +. ...+|+.++++++.+. + +..+++++|+|+||++++.++....+ ...+.++++
T Consensus 118 vdYrlape~~------~p-~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl 190 (318)
T PRK10162 118 IDYTLSPEAR------FP-QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLL 190 (318)
T ss_pred ecCCCCCCCC------CC-CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEE
Confidence 9999765432 11 2468899998888653 3 34689999999999999988764321 136889999
Q ss_pred EcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHh
Q 008093 266 ICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRN 345 (578)
Q Consensus 266 is~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~ 345 (578)
+++..+....... ..+. .... ..... .+..+...+........+ -+
T Consensus 191 ~~p~~~~~~~~s~-------~~~~---------------~~~~-~l~~~------~~~~~~~~y~~~~~~~~~--p~--- 236 (318)
T PRK10162 191 WYGLYGLRDSVSR-------RLLG---------------GVWD-GLTQQ------DLQMYEEAYLSNDADRES--PY--- 236 (318)
T ss_pred ECCccCCCCChhH-------HHhC---------------CCcc-ccCHH------HHHHHHHHhCCCccccCC--cc---
Confidence 9887765321000 0000 0000 00000 000011111000000000 00
Q ss_pred CCcc-cccCCCccceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCcccccc-ccccCcccHHHHHHHHHHhhc
Q 008093 346 CSSS-TYVGNVSIPLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFE-GLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 346 ~s~~-~~l~~I~vPvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~e-g~~~~~~w~~~~v~eFL~~~~ 422 (578)
.++. ..+.+--.|+++++|+.|++.+.. .+...+.+..-.+++.+++++.|--+.- +..+......+.+.+||.+..
T Consensus 237 ~~p~~~~l~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 237 YCLFNNDLTRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred cCcchhhhhcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 0000 112122369999999999998643 2233345566679999999999943222 111222234566777776653
No 84
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.38 E-value=5.4e-12 Score=130.87 Aligned_cols=245 Identities=18% Similarity=0.135 Sum_probs=133.8
Q ss_pred CCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEE
Q 008093 116 PCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (578)
Q Consensus 116 ~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~ 195 (578)
+.+.+.+..+...+|..|....+.|... ....|.||.+||.++.+.. + ...+ .++.+||.|+.+
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~-------------~~~~Pavv~~hGyg~~~~~-~-~~~~-~~a~~G~~vl~~ 115 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA-------------KGKLPAVVQFHGYGGRSGD-P-FDLL-PWAAAGYAVLAM 115 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S-------------SSSEEEEEEE--TT--GGG-H-HHHH-HHHHTT-EEEEE
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC-------------CCCcCEEEEecCCCCCCCC-c-cccc-ccccCCeEEEEe
Confidence 3456666777888999998766666421 3567999999999665443 3 2222 467789999999
Q ss_pred eCCCCCCCCCCC--------CCCCCC------------CchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhh
Q 008093 196 NHRGLGGVSITS--------DCFYNA------------GWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 196 D~RG~G~S~~~~--------~~~~~~------------~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
|.||+|+..... ...... +...|...+++++...- +..+|.+.|.|+||.+++..|+-
T Consensus 116 d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL 195 (320)
T PF05448_consen 116 DVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL 195 (320)
T ss_dssp --TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh
Confidence 999999422110 000000 12368888899988653 35689999999999999999988
Q ss_pred cCCCCCccEEEEEcCCc-chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhc
Q 008093 254 EGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL 332 (578)
Q Consensus 254 ~p~~~~V~~~Vlis~p~-d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~ 332 (578)
.+ +|+++++..|.+ |.......-... .-| ..+..+.+...+.- ....+.-+
T Consensus 196 d~---rv~~~~~~vP~l~d~~~~~~~~~~~---~~y-----~~~~~~~~~~d~~~------------~~~~~v~~----- 247 (320)
T PF05448_consen 196 DP---RVKAAAADVPFLCDFRRALELRADE---GPY-----PEIRRYFRWRDPHH------------EREPEVFE----- 247 (320)
T ss_dssp SS---T-SEEEEESESSSSHHHHHHHT--S---TTT-----HHHHHHHHHHSCTH------------CHHHHHHH-----
T ss_pred Cc---cccEEEecCCCccchhhhhhcCCcc---ccH-----HHHHHHHhccCCCc------------ccHHHHHH-----
Confidence 75 599988887643 322111000000 000 01112221110000 00000000
Q ss_pred cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHH
Q 008093 333 VGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVR 412 (578)
Q Consensus 333 ~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~ 412 (578)
...| .+..+..+.|++|+++-.|..|++||+...-.........+++.+++.+||-..-+ +-.+
T Consensus 248 ------~L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~-------~~~~ 311 (320)
T PF05448_consen 248 ------TLSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE-------FQED 311 (320)
T ss_dssp ------HHHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH-------HHHH
T ss_pred ------HHhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh-------HHHH
Confidence 0011 12345677899999999999999999985432222334568999999999954332 2367
Q ss_pred HHHHHHHh
Q 008093 413 AVNEYLGV 420 (578)
Q Consensus 413 ~v~eFL~~ 420 (578)
...+||.+
T Consensus 312 ~~~~~l~~ 319 (320)
T PF05448_consen 312 KQLNFLKE 319 (320)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 78888764
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.31 E-value=9.5e-12 Score=122.22 Aligned_cols=186 Identities=15% Similarity=0.111 Sum_probs=114.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC-CCCCCCC---CC----C---CCchHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG-VSITSDC---FY----N---AGWTEDAREVIGYL 226 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~-S~~~~~~---~~----~---~~~~~Dl~~~i~~l 226 (578)
.+.|.||++|++.|-. .+++.++..|+++||.|+++|+-+-.. ....... .. . .....|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3678999999997644 456899999999999999999755433 1111110 00 0 11236788889999
Q ss_pred HHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhc
Q 008093 227 HHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE 304 (578)
Q Consensus 227 ~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 304 (578)
+.+. ...++.++|+|+||.+++.++.+. + .++++|..-++....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~--~~~a~v~~yg~~~~~------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-P--RVDAAVSFYGGSPPP------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T--TSSEEEEES-SSSGG-------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-c--ccceEEEEcCCCCCC-------------------------------
Confidence 8765 356899999999999999988877 3 588988775411000
Q ss_pred ccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHh
Q 008093 305 PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW---DECR 381 (578)
Q Consensus 305 ~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~ 381 (578)
.......++++|+|+++|++|+.++.+.... .+..
T Consensus 136 ------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 136 ------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 0012244578999999999999999875332 2334
Q ss_pred cCCCEEEEEeCCCCcccccccccc-Cc---ccHHHHHHHHHHhh
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTA-AG---MWWVRAVNEYLGVL 421 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~-~~---~w~~~~v~eFL~~~ 421 (578)
.....++.++++++|--......+ ++ ....+.+.+||++.
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 578899999999999433332111 11 12346777777653
No 86
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.27 E-value=8.7e-11 Score=118.71 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=96.7
Q ss_pred CCcEEEEECCCCCCCcc-HHHHHHHHHHHhCCceEEEEeCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC---
Q 008093 159 TTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHR----GLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--- 230 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~-~yi~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--- 230 (578)
...+|||+.|++.+-.. .|+..++..|.+.||.++-+.++ |+|-+.+ ...++|+.++|+|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL-------~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL-------DRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H-------HHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh-------hhHHHHHHHHHHHHHHhhccc
Confidence 44579999999766554 78899999998889999999865 4444332 245789999999999883
Q ss_pred -CCCcEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhc--
Q 008093 231 -PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHE-- 304 (578)
Q Consensus 231 -~~~~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~-- 304 (578)
...+|+++|||-|..-++.|+..... ..+|+|+|+-+|..|-+........ +..+.+.+... ++.+...+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~---~~~~~~~v~~A-~~~i~~g~~~ 180 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE---REAYEELVALA-KELIAEGKGD 180 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH------HHHHHHHH-HHHHHCT-TT
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc---hHHHHHHHHHH-HHHHHcCCCC
Confidence 56799999999999999999987643 3489999999988776544332221 01122211111 11111111
Q ss_pred ccccccCCHHHH-hccCCHHHHHhhhhhccCCCCCHHHHHHhCC----cccccCCCccceEEEEeCCCCCCCCCCc----
Q 008093 305 PRYSRLANWEGI-KKSRSIRDFDSHATCLVGKFETVDTYYRNCS----SSTYVGNVSIPLLCISSLDDPVCTVEAI---- 375 (578)
Q Consensus 305 ~~l~~~~d~~~i-~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s----~~~~l~~I~vPvLiI~g~dDpivp~~~~---- 375 (578)
..++........ ...-+-..|... .....-++|+...- ....+.+|+.|+|++.|.+|.+||...-
T Consensus 181 ~~lp~~~~~~~~~~~PiTA~Rf~SL-----~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~L 255 (303)
T PF08538_consen 181 EILPREFTPLVFYDTPITAYRFLSL-----ASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEAL 255 (303)
T ss_dssp -GG----GGTTT-SS---HHHHHT------S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred ceeeccccccccCCCcccHHHHHhc-----cCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccc
Confidence 001000000000 000111111111 11123334443321 1235677888999999999999997521
Q ss_pred -chHHHhcCC---CEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008093 376 -PWDECRANK---NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 376 -~~~~~~~~~---~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~ 419 (578)
.+.....++ .....+++++.|..--++-.....|+.++|..||+
T Consensus 256 l~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 256 LERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 111111111 12245889999965433211113488999999974
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.27 E-value=4.9e-11 Score=129.77 Aligned_cols=108 Identities=14% Similarity=0.124 Sum_probs=83.9
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 160 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
+..||++|.+- ...|| ++++++|.++||.|+++|+++-+... ......++.+.+.++++.+++..+..
T Consensus 215 ~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 215 ARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 34588999873 33454 67899999999999999999866542 11111344568889999999988889
Q ss_pred cEEEEEEchHHHHHHH----HHhhcCCCCCccEEEEEcCCcchhh
Q 008093 234 PLFAIGTSIGANILVK----YLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~----ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
++.++|+||||.+++. |++.+++. +|+.++++.+|.|+..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllatplDf~~ 332 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVSLLDSTM 332 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeecccccCC
Confidence 9999999999999987 67776632 7999999999999764
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.26 E-value=1.5e-10 Score=113.73 Aligned_cols=182 Identities=22% Similarity=0.171 Sum_probs=98.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHH-HHHhCCceEEEEeCCC------CCCC--CCCCCCCCC-CC--chHH------
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVF-NTAKRGWNVVVSNHRG------LGGV--SITSDCFYN-AG--WTED------ 218 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~-~l~~~Gy~Vvv~D~RG------~G~S--~~~~~~~~~-~~--~~~D------ 218 (578)
++.+|+||++||+ |++...+ ..+.. .+.....+++.++-+- .|.. ..-...... .. ..++
T Consensus 11 ~~~~~lvi~LHG~-G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--T-TS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 4678999999999 5555433 33333 2233467777776542 1220 000000000 01 1222
Q ss_pred -HHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhH
Q 008093 219 -AREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGL 296 (578)
Q Consensus 219 -l~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l 296 (578)
+.++++...+. .+..++++.|+|.||++++.++..++. ++.|+|++++.......
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~--------------------- 145 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESE--------------------- 145 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCC---------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeecccccccc---------------------
Confidence 33334433322 256689999999999999999999998 89999999754321100
Q ss_pred HHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008093 297 QDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP 376 (578)
Q Consensus 297 ~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~ 376 (578)
.. ....... ++|++++||.+|+++|.+...
T Consensus 146 ----------------~~--------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 146 ----------------LE--------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp ----------------CH--------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHH
T ss_pred ----------------cc--------------------------------ccccccC--CCcEEEEecCCCCcccHHHHH
Confidence 00 0001111 789999999999999976332
Q ss_pred ---hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 377 ---WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 377 ---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..+.....++++..++++||-...+ ..+.+.+||++.
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~~~--------~~~~~~~~l~~~ 215 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEISPE--------ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS--HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCCHH--------HHHHHHHHHhhh
Confidence 2344555689999999999955333 556788888763
No 89
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=4.6e-10 Score=111.74 Aligned_cols=207 Identities=16% Similarity=0.099 Sum_probs=138.4
Q ss_pred EEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC-C
Q 008093 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG-L 200 (578)
Q Consensus 122 r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG-~ 200 (578)
...+..+| +.+...+..|.. ....|.||++|++.|-.. +++.+++.+++.||.|+++|+-+ .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~--------------~~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~ 66 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG--------------AGGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQ 66 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc--------------CCCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccC
Confidence 34566667 677767776643 123399999999976444 57999999999999999999877 3
Q ss_pred CCCCCCC--CC---------CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 201 GGVSITS--DC---------FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 201 G~S~~~~--~~---------~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
|.+.... +. ........|+.+.++++..+- ...+|.++|+||||.+++.++...++ ++++|+.-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fy 143 (236)
T COG0412 67 GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFY 143 (236)
T ss_pred CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEec
Confidence 3332211 10 001223479999999998764 35679999999999999999988774 88887552
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS 347 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s 347 (578)
+..-. .
T Consensus 144 g~~~~--------------------------------------------------------------------------~ 149 (236)
T COG0412 144 GGLIA--------------------------------------------------------------------------D 149 (236)
T ss_pred CCCCC--------------------------------------------------------------------------C
Confidence 11100 0
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEeCCCCccccccc----cccCc---ccHHHHHHHH
Q 008093 348 SSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRANKNVVLATTWHGGHLAFFEG----LTAAG---MWWVRAVNEY 417 (578)
Q Consensus 348 ~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~~~~~l~~~~~GGH~~~~eg----~~~~~---~w~~~~v~eF 417 (578)
......++++|+|++.|+.|+.+|....... .......+.+.+++++.|--+-+. ..-+. ..-.+.+.+|
T Consensus 150 ~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~f 229 (236)
T COG0412 150 DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAF 229 (236)
T ss_pred cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHH
Confidence 0112567899999999999999998744332 223334688999999878544331 01111 1234678888
Q ss_pred HHhhc
Q 008093 418 LGVLH 422 (578)
Q Consensus 418 L~~~~ 422 (578)
+.+..
T Consensus 230 f~~~~ 234 (236)
T COG0412 230 FKRLL 234 (236)
T ss_pred HHHhc
Confidence 87754
No 90
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.25 E-value=6.4e-11 Score=125.37 Aligned_cols=249 Identities=14% Similarity=0.182 Sum_probs=138.2
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
|.||++.-+.| ....+.+.+++.|.. |+.|++.|+.--+..+....++...++++-+.++++++ +. ++.++|+
T Consensus 103 ~pvLiV~Pl~g-~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~Gv 175 (406)
T TIGR01849 103 PAVLIVAPMSG-HYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIAV 175 (406)
T ss_pred CcEEEEcCCch-HHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEEE
Confidence 66888998854 444456999999999 99999999987776654333332223333333333333 33 4999999
Q ss_pred chHHHHHHHHHhhcCC---CCCccEEEEEcCCcchhhhhHHHhhH--------HHHH---------------HHHH-HHH
Q 008093 241 SIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLIGDRFIGRR--------LIQK---------------IYDR-ALT 293 (578)
Q Consensus 241 SmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~~~~~~~l~~~--------~~~~---------------~~~~-~l~ 293 (578)
|+||..++.+++...+ ..+++.++++.+|.|.......+... +.+. .|.. .+.
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 9999998877665422 22699999999999986531111110 0000 0100 000
Q ss_pred HhHH-----HHHhhhcccccccC--CHHHHhccCCHHHHHhhhhhcc--CC--C-CCHHHHHHhCCcc----------cc
Q 008093 294 IGLQ-----DYAQLHEPRYSRLA--NWEGIKKSRSIRDFDSHATCLV--GK--F-ETVDTYYRNCSSS----------TY 351 (578)
Q Consensus 294 ~~l~-----~~~~~~~~~l~~~~--d~~~i~~~~s~~efd~~~~~~~--~g--~-~~~~~yy~~~s~~----------~~ 351 (578)
..++ +....+...+.... +.+. ......|.+.+.... .+ | +.+++.|++.... -.
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~---~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vd 332 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQE---ADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVD 332 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcch---HHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEec
Confidence 0010 00011111110000 0000 011122222211110 00 1 2444555554422 15
Q ss_pred cCCCc-cceEEEEeCCCCCCCCCCcch--HHHh--cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 352 VGNVS-IPLLCISSLDDPVCTVEAIPW--DECR--ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 352 l~~I~-vPvLiI~g~dDpivp~~~~~~--~~~~--~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+++|+ +|+|.+.|++|.|+|+..... .++. ........+.++|||+|.+-|....+ .+...|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~-~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFRE-EIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhh-hhchHHHHHHHh
Confidence 67898 999999999999999985433 2221 23455677778999999998743322 345688888864
No 91
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.23 E-value=8.5e-11 Score=125.75 Aligned_cols=111 Identities=19% Similarity=0.207 Sum_probs=83.1
Q ss_pred CCCcEEEEECCCCCCC-ccHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CC
Q 008093 158 DTTPIAIVIPGLTSDS-AASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PK 232 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s-~~~yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~ 232 (578)
..+|++|++||+.++. .+.|+..++..+.. ..|+|+++|++|+|.+.......+.....+++.++++++.... +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 5678999999997543 34566667766653 3699999999999987644322222223367888888886543 46
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.++++|||||||.++..++...+. +|.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCC
Confidence 789999999999999998887777 799999998753
No 92
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=2.4e-10 Score=111.65 Aligned_cols=241 Identities=17% Similarity=0.160 Sum_probs=147.0
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
++--+..++..+|..|......| .. .....|.||-.||++|+..++. .+. .++..||.|+++|-
T Consensus 54 ve~ydvTf~g~~g~rI~gwlvlP-~~------------~~~~~P~vV~fhGY~g~~g~~~--~~l-~wa~~Gyavf~Mdv 117 (321)
T COG3458 54 VEVYDVTFTGYGGARIKGWLVLP-RH------------EKGKLPAVVQFHGYGGRGGEWH--DML-HWAVAGYAVFVMDV 117 (321)
T ss_pred eEEEEEEEeccCCceEEEEEEee-cc------------cCCccceEEEEeeccCCCCCcc--ccc-cccccceeEEEEec
Confidence 44445566777899998544444 31 1357899999999987665422 222 34567999999999
Q ss_pred CCCCCCCCCCCC---------------------CCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhc
Q 008093 198 RGLGGVSITSDC---------------------FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 198 RG~G~S~~~~~~---------------------~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
||.|.+...+.. .|..+...|+..+++.+.... ...+|.+.|.|.||.|++..++-.
T Consensus 118 RGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~ 197 (321)
T COG3458 118 RGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD 197 (321)
T ss_pred ccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC
Confidence 999987331110 011122358888888877654 457899999999999999888877
Q ss_pred CCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccC
Q 008093 255 GEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVG 334 (578)
Q Consensus 255 p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~ 334 (578)
+ ++++++++-|-+.-.. +.+.- ....-| ..+..+.+.|.+. ...+ .+++.-|
T Consensus 198 ~---rik~~~~~~Pfl~df~--r~i~~-~~~~~y-----dei~~y~k~h~~~------e~~v--~~TL~yf--------- 249 (321)
T COG3458 198 P---RIKAVVADYPFLSDFP--RAIEL-ATEGPY-----DEIQTYFKRHDPK------EAEV--FETLSYF--------- 249 (321)
T ss_pred h---hhhcccccccccccch--hheee-cccCcH-----HHHHHHHHhcCch------HHHH--HHHHhhh---------
Confidence 6 4888887755432111 00000 000111 1233444444332 0000 1111111
Q ss_pred CCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHH
Q 008093 335 KFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAV 414 (578)
Q Consensus 335 g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v 414 (578)
++.+...+|++|+|+.-|..|++||+...-.........+.+.+++.-+|.+.-. .-.+.+
T Consensus 250 ------------D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p~-------~~~~~~ 310 (321)
T COG3458 250 ------------DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGPG-------FQSRQQ 310 (321)
T ss_pred ------------hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCcc-------hhHHHH
Confidence 1345567899999999999999999985432223344556777788777865433 345667
Q ss_pred HHHHHhh
Q 008093 415 NEYLGVL 421 (578)
Q Consensus 415 ~eFL~~~ 421 (578)
..|++.+
T Consensus 311 ~~~l~~l 317 (321)
T COG3458 311 VHFLKIL 317 (321)
T ss_pred HHHHHhh
Confidence 8887764
No 93
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.21 E-value=4.1e-11 Score=122.12 Aligned_cols=111 Identities=15% Similarity=0.149 Sum_probs=81.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--CCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~ 234 (578)
..+|++|++||++++....|...+...+.. .+|+|+++|++|++...............+++.++++++.+. .+..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 567899999999876645555666665544 579999999999843221110000112236888889988776 34568
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++|||||||.++..++...++ +|.++++++|..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCc
Confidence 9999999999999999998887 899999998754
No 94
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.18 E-value=2e-09 Score=106.77 Aligned_cols=126 Identities=16% Similarity=0.237 Sum_probs=91.4
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 204 (578)
+...+|..+.++-..... .+...+..+||-+||-+|++.+ + +.+...|.+.|+|++.+|+||+|.++
T Consensus 11 ~~~~~~~~~~~~a~y~D~-----------~~~gs~~gTVv~~hGsPGSH~D-F-kYi~~~l~~~~iR~I~iN~PGf~~t~ 77 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDS-----------LPSGSPLGTVVAFHGSPGSHND-F-KYIRPPLDEAGIRFIGINYPGFGFTP 77 (297)
T ss_pred cccccCceEEEEEEEEec-----------CCCCCCceeEEEecCCCCCccc-h-hhhhhHHHHcCeEEEEeCCCCCCCCC
Confidence 344578888777554322 2334556689999999987765 3 77888999999999999999999998
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 205 ITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 205 ~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
......|+. .+-...++.+..+. -..+++++|||.|+-.|+..+..+| ..|+++++++-
T Consensus 78 ~~~~~~~~n---~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 78 GYPDQQYTN---EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred CCcccccCh---HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 765555543 23333333333333 2468999999999999999999883 56999998753
No 95
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.15 E-value=5.4e-10 Score=128.46 Aligned_cols=227 Identities=13% Similarity=0.071 Sum_probs=131.0
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC----------------CCCcEEEEEEchH
Q 008093 180 HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----------------PKAPLFAIGTSIG 243 (578)
Q Consensus 180 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~----------------~~~~i~lvGhSmG 243 (578)
.+...++.+||.|++.|.||+|+|++.. ..+.....+|..++|+|+..+. .+.++.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~-~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCP-TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcC-ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 4567889999999999999999998763 2233445689999999998531 2569999999999
Q ss_pred HHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHH--HHHHHHHHhHHHHH-hhhc-c-c-ccccCCHHHHh
Q 008093 244 ANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQK--IYDRALTIGLQDYA-QLHE-P-R-YSRLANWEGIK 317 (578)
Q Consensus 244 G~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~--~~~~~l~~~l~~~~-~~~~-~-~-l~~~~d~~~i~ 317 (578)
|.+++..|+..++ .++++|.+++..+...... ....+.. .+...-...+.... .+.. . . ......++..
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr--~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~- 423 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYR--ENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKL- 423 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhh--cCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHH-
Confidence 9999998888777 7999999876654321100 0000000 00000000000000 0000 0 0 0000000000
Q ss_pred ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC-cchHH--HhcCCCEEEEEeCCC
Q 008093 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA-IPWDE--CRANKNVVLATTWHG 394 (578)
Q Consensus 318 ~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~-~~~~~--~~~~~~~~l~~~~~G 394 (578)
+.++..... ..-....+||+..+....+++|++|+|++||..|..++.+. ..... .....+..+++. .+
T Consensus 424 ----~~~~~~~~~---~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g 495 (767)
T PRK05371 424 ----LAELTAAQD---RKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QG 495 (767)
T ss_pred ----Hhhhhhhhh---hcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CC
Confidence 000100000 00123457888888888899999999999999999998653 23222 222445666554 56
Q ss_pred CccccccccccCcccHHHHHHHHHHhhcC
Q 008093 395 GHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 395 GH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
||..... .....+.+.+.+|++..+.
T Consensus 496 ~H~~~~~---~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 496 GHVYPNN---WQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CccCCCc---hhHHHHHHHHHHHHHhccc
Confidence 8865332 1122356778889887654
No 96
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.14 E-value=5.2e-10 Score=105.73 Aligned_cols=157 Identities=18% Similarity=0.212 Sum_probs=97.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGT 240 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGh 240 (578)
|+++||++|+....|...+.+.+... ++|-..|+ .. -|+.+.++.+.+.. .+.+.++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~~---------P~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW--------DN---------PDLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC----------TS-----------HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc--------CC---------CCHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999999888888878888888776 77777665 11 23555666665543 2457999999
Q ss_pred chHHHHHHHHHh-hcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhcc
Q 008093 241 SIGANILVKYLG-EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319 (578)
Q Consensus 241 SmGG~ial~ya~-~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~ 319 (578)
|+|+..+++|++ +... +|.|+++++++...... . ..+.
T Consensus 63 SLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~~-~-------------------------~~~~------------- 101 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDPE-P-------------------------FPPE------------- 101 (171)
T ss_dssp THHHHHHHHHHHHTCCS--SEEEEEEES--SCGCHH-C-------------------------CTCG-------------
T ss_pred CHHHHHHHHHHhhcccc--cccEEEEEcCCCccccc-c-------------------------hhhh-------------
Confidence 999999999995 4444 89999999876321000 0 0000
Q ss_pred CCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccc
Q 008093 320 RSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAF 399 (578)
Q Consensus 320 ~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~ 399 (578)
...|.. .....+.+|.++|.++|||++|.+......... +..++.++++||+.-
T Consensus 102 -------------~~~f~~-----------~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 102 -------------LDGFTP-----------LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNA 155 (171)
T ss_dssp -------------GCCCTT-----------SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSG
T ss_pred -------------cccccc-----------CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCccc
Confidence 011110 112234567799999999999987554333333 578899999999987
Q ss_pred ccccc
Q 008093 400 FEGLT 404 (578)
Q Consensus 400 ~eg~~ 404 (578)
-+|..
T Consensus 156 ~~G~~ 160 (171)
T PF06821_consen 156 ASGFG 160 (171)
T ss_dssp GGTHS
T ss_pred ccCCC
Confidence 77643
No 97
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=2.5e-09 Score=109.79 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=79.0
Q ss_pred CCCcEEEEECCCCCCCcc-H--------HHHHHHH---HHHhCCceEEEEeCCCCC-CCCCCCC---C--CCCCC----c
Q 008093 158 DTTPIAIVIPGLTSDSAA-S--------YIRHLVF---NTAKRGWNVVVSNHRGLG-GVSITSD---C--FYNAG----W 215 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~-~--------yi~~l~~---~l~~~Gy~Vvv~D~RG~G-~S~~~~~---~--~~~~~----~ 215 (578)
.....|++|||++|+++. . |+..++- .+.-..|-|++.|..|.+ +|..+.. . .|... -
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 345679999999986542 1 3344332 223345999999999944 5543321 1 12211 2
Q ss_pred hHHHHHHHHHHHHHCCCCcEE-EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 216 TEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~i~-lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+|...+-..+.+..+-+++. +||-||||+.++.++..+|+ .|..+|.|+++....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccCC
Confidence 356666667777788877877 99999999999999999999 899999998866544
No 98
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.12 E-value=1.2e-09 Score=118.65 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=107.9
Q ss_pred CCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEEC--CCC---CCCccHHHHHHHH---HHHhCC
Q 008093 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIP--GLT---SDSAASYIRHLVF---NTAKRG 189 (578)
Q Consensus 118 ~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllH--Gl~---G~s~~~yi~~l~~---~l~~~G 189 (578)
..++.+.++|.||.+|+.|.+.|.+ ....|+++..+ =.. |.... ...... .++.+|
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~--------------~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~G 80 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG--------------AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQG 80 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC--------------CCCCceeEEeeccccccccccCcc--hhhcccccceeecCc
Confidence 3456788999999999999999854 25678888887 110 01111 122333 577899
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 190 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
|.||..|.||.|.|++.-...+. ...+|-.++|+++.++ ..+.++..+|.|++|...+..|+..|. .+++++..++
T Consensus 81 YavV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~ 157 (563)
T COG2936 81 YAVVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEG 157 (563)
T ss_pred eEEEEecccccccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeeccccc
Confidence 99999999999999988665555 5678999999999875 357799999999999999999999887 7999999988
Q ss_pred Ccchhhh
Q 008093 269 PWDLLIG 275 (578)
Q Consensus 269 p~d~~~~ 275 (578)
.+|....
T Consensus 158 ~~D~y~d 164 (563)
T COG2936 158 LVDRYRD 164 (563)
T ss_pred ccccccc
Confidence 8886554
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.08 E-value=1.5e-09 Score=104.78 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=127.3
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
-.+.+.+.||.+|++ |...|..+ .....++||+.+|+ |.....| ..++++|+..||+|+.+|.--|
T Consensus 3 idhvi~~~~~~~I~v-wet~P~~~-----------~~~~~~tiliA~Gf-~rrmdh~-agLA~YL~~NGFhViRyDsl~H 68 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRV-WETRPKNN-----------EPKRNNTILIAPGF-ARRMDHF-AGLAEYLSANGFHVIRYDSLNH 68 (294)
T ss_dssp EEEEEEETTTEEEEE-EEE---TT-----------S---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B-
T ss_pred ccceeEcCCCCEEEE-eccCCCCC-----------CcccCCeEEEecch-hHHHHHH-HHHHHHHhhCCeEEEecccccc
Confidence 356788999999997 54443321 12456899999999 5566677 7899999999999999999876
Q ss_pred -CCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHH
Q 008093 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFI 279 (578)
Q Consensus 201 -G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l 279 (578)
|.|++.-..+....-..|+..+++|++ +.+..++.++.-|+.|-+|...+++- .+.-+|..-+..++....
T Consensus 69 vGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TL--- 140 (294)
T PF02273_consen 69 VGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTL--- 140 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHH---
T ss_pred ccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHH---
Confidence 777766444333334579999999999 55667899999999999999999864 255566555555543221
Q ss_pred hhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccce
Q 008093 280 GRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPL 359 (578)
Q Consensus 280 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPv 359 (578)
.+.+.. .|+......++...+.+... -.-.-|-.. +...++.++. +....++.+.+|+
T Consensus 141 -----e~al~~-------Dyl~~~i~~lp~dldfeGh~--l~~~vFv~d--c~e~~w~~l~------ST~~~~k~l~iP~ 198 (294)
T PF02273_consen 141 -----EKALGY-------DYLQLPIEQLPEDLDFEGHN--LGAEVFVTD--CFEHGWDDLD------STINDMKRLSIPF 198 (294)
T ss_dssp -----HHHHSS--------GGGS-GGG--SEEEETTEE--EEHHHHHHH--HHHTT-SSHH------HHHHHHTT--S-E
T ss_pred -----HHHhcc-------chhhcchhhCCCcccccccc--cchHHHHHH--HHHcCCccch------hHHHHHhhCCCCE
Confidence 111110 12222222222211111000 000011111 1124455443 2346788899999
Q ss_pred EEEEeCCCCCCCCCCcchHH-HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 360 LCISSLDDPVCTVEAIPWDE-CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 360 LiI~g~dDpivp~~~~~~~~-~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.++|.+|..|....+.... ....+...+...++.+|-- -| -...+..|.+++.
T Consensus 199 iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL-~e--------nl~vlrnfy~svt 253 (294)
T PF02273_consen 199 IAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL-GE--------NLVVLRNFYQSVT 253 (294)
T ss_dssp EEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T-TS--------SHHHHHHHHHHHH
T ss_pred EEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh-hh--------ChHHHHHHHHHHH
Confidence 99999999999876554322 2356778899999999932 11 2345666777664
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.02 E-value=9.7e-09 Score=92.90 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=116.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC--CCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S--~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
.-+||+-||-+++..+..|...+..++.+||.|+.|+++-...- ....+..-...........+..++......|+++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 34788899998888888999999999999999999997543221 1111111111112334444555666655669999
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHh
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK 317 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~ 317 (578)
-|+||||-++...+.+... +|+++++++-|+..... + +
T Consensus 94 GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGK-----------------------------P--------e--- 131 (213)
T COG3571 94 GGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGK-----------------------------P--------E--- 131 (213)
T ss_pred ccccccchHHHHHHHhhcC--CcceEEEecCccCCCCC-----------------------------c--------c---
Confidence 9999999999999888776 69999998766533110 0 0
Q ss_pred ccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCc
Q 008093 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGH 396 (578)
Q Consensus 318 ~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH 396 (578)
. -....+..+++|+||.+|..|++-..+.+. ....++.++++.++++.|
T Consensus 132 ---~-------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~adH 180 (213)
T COG3571 132 ---Q-------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDADH 180 (213)
T ss_pred ---c-------------------------chhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCcc
Confidence 0 011356778999999999999998766443 345678899999999999
No 101
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.98 E-value=1.8e-09 Score=105.16 Aligned_cols=102 Identities=21% Similarity=0.174 Sum_probs=71.0
Q ss_pred EEEECCCC--CCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-----CCCCc
Q 008093 163 AIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-----YPKAP 234 (578)
Q Consensus 163 VVllHGl~--G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~~ 234 (578)
||++||-+ .++.+.. ..++..+++ .|+.|+++|||=.... ......+|+.++++++.+. ++..+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~~-------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPEA-------PFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTTS-------STTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccccc-------cccccccccccceeeeccccccccccccc
Confidence 68999832 2223333 455666664 8999999999954322 1224569999999999887 56779
Q ss_pred EEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~d~ 272 (578)
++++|+|.||.+++.++....+. ..+++++++++..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999888654332 258999999997766
No 102
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.96 E-value=2.4e-08 Score=99.37 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=79.3
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-------
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------- 230 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~------- 230 (578)
.+=|+|||+||+. ...++| ..+.+++++.||-||++|+...+... .....+++.++++|+.+..
T Consensus 15 g~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~-------~~~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 15 GTYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGGPD-------DTDEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred CCcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCCCC-------cchhHHHHHHHHHHHHhcchhhcccc
Confidence 4569999999995 667778 88999999999999999977644421 1234578888888876532
Q ss_pred ---CCCcEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCC
Q 008093 231 ---PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSP 269 (578)
Q Consensus 231 ---~~~~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p 269 (578)
+-.++.+.|||-||-++...+..+.+ ..+++++++++|.
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 13489999999999999988877632 2379999999754
No 103
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.96 E-value=1.8e-08 Score=104.57 Aligned_cols=130 Identities=16% Similarity=0.077 Sum_probs=90.0
Q ss_pred EecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC--CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 008093 126 RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (578)
Q Consensus 126 ~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~--G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S 203 (578)
...++..+.++++.|.. ......|+||++||-+ .++....-..+...+...|+.|+++|||-...-
T Consensus 57 ~~~~~~~~~~~~y~p~~------------~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~ 124 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR------------KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH 124 (312)
T ss_pred cCCCCCceeEEEECCCC------------CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC
Confidence 45566668899998711 1135689999999932 222222223455556678999999999965432
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHC-----CCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCcchhh
Q 008093 204 SITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~d~~~ 274 (578)
+ .....+|+.+++.++.+.. ...+|+++|+|.||++++.++....+ .....+.+++++..|...
T Consensus 125 ~-------~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 125 P-------FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred C-------CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 2 1245688999999998663 35689999999999999988765443 235778888888777653
No 104
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.95 E-value=4.1e-09 Score=119.51 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=70.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC---------CCC--CC-C--------CC---c
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT---------SDC--FY-N--------AG---W 215 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~---------~~~--~~-~--------~~---~ 215 (578)
..|+||++||+++ ....| ..++..|.++||+|+++|+||||.+... ... .| + .+ .
T Consensus 448 g~P~VVllHG~~g-~~~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITG-AKENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCC-CHHHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 4579999999966 44455 6889999999999999999999998443 110 01 1 01 2
Q ss_pred hHHHHHHHHHHH------HH------CCCCcEEEEEEchHHHHHHHHHhhc
Q 008093 216 TEDAREVIGYLH------HE------YPKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 216 ~~Dl~~~i~~l~------~~------~~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
..|+..+...++ .. ++..+++++||||||.++..++...
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 368888878777 32 5677999999999999999998763
No 105
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.95 E-value=2.5e-09 Score=87.68 Aligned_cols=46 Identities=24% Similarity=0.501 Sum_probs=40.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT 206 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 206 (578)
.+.+|+++||+ +.+...| ..++..|+++||.|+++|+||||.|+..
T Consensus 15 ~k~~v~i~HG~-~eh~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~ 60 (79)
T PF12146_consen 15 PKAVVVIVHGF-GEHSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGK 60 (79)
T ss_pred CCEEEEEeCCc-HHHHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCc
Confidence 58899999999 5566677 8999999999999999999999999853
No 106
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.95 E-value=4.1e-07 Score=90.33 Aligned_cols=271 Identities=13% Similarity=0.146 Sum_probs=158.4
Q ss_pred eeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHH-----HHHHHhCCceEEE
Q 008093 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL-----VFNTAKRGWNVVV 194 (578)
Q Consensus 120 y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l-----~~~l~~~Gy~Vvv 194 (578)
.+.+.+.+.- |.++...+..++ +.+|++|-.|.++-++.+.| ..+ +..+.++ |.++-
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~~---------------~~kpaiiTyhDlglN~~scF-q~ff~~p~m~ei~~~-fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDPK---------------GNKPAIITYHDLGLNHKSCF-QGFFNFPDMAEILEH-FCVYH 83 (326)
T ss_pred ceeeeecccc-ccEEEEEecCCC---------------CCCceEEEecccccchHhHh-HHhhcCHhHHHHHhh-eEEEe
Confidence 4566676666 456665554322 36888999999865555544 322 2334454 99999
Q ss_pred EeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 195 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
+|.+||-.-...-+..|.+--.+|+.+.+-.+.+.+.-..++.+|.-.||+|..++|..+|+ +|-|+|+|++-.....
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAKG 161 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCch
Confidence 99999854433334444444457777777766666666789999999999999999999999 9999999987554443
Q ss_pred hhHHHhhHHH-HHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCccccc-
Q 008093 275 GDRFIGRRLI-QKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV- 352 (578)
Q Consensus 275 ~~~~l~~~~~-~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l- 352 (578)
...+...++. +.++..-++.....++-.|.-.-..... +..-+.++...+... .+-.++..|.........|
T Consensus 162 wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~-----~~diVq~Yr~~l~~~-~N~~Nl~~fl~ayn~R~DL~ 235 (326)
T KOG2931|consen 162 WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN-----NSDIVQEYRQHLGER-LNPKNLALFLNAYNGRRDLS 235 (326)
T ss_pred HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc-----cHHHHHHHHHHHHhc-CChhHHHHHHHHhcCCCCcc
Confidence 3333333322 2233334455555554433211000000 011112222222111 1223334444333222211
Q ss_pred -------CCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 353 -------GNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 353 -------~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
..++||+|++-|+.-|.+..- +.........+..++.+.++|-+...+. |.+ +.+.+.=|+.-.
T Consensus 236 ~~r~~~~~tlkc~vllvvGd~Sp~~~~v-v~~n~~Ldp~~ttllk~~d~g~l~~e~q--P~k--l~ea~~~FlqG~ 306 (326)
T KOG2931|consen 236 IERPKLGTTLKCPVLLVVGDNSPHVSAV-VECNSKLDPTYTTLLKMADCGGLVQEEQ--PGK--LAEAFKYFLQGM 306 (326)
T ss_pred ccCCCcCccccccEEEEecCCCchhhhh-hhhhcccCcccceEEEEcccCCcccccC--chH--HHHHHHHHHccC
Confidence 255799999999998887543 1111122345678888888887766652 544 778888888765
No 107
>COG0400 Predicted esterase [General function prediction only]
Probab=98.89 E-value=4.2e-08 Score=95.18 Aligned_cols=176 Identities=21% Similarity=0.173 Sum_probs=106.6
Q ss_pred CCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC-------CCCCCCC-C---chHHHHHHHH
Q 008093 156 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT-------SDCFYNA-G---WTEDAREVIG 224 (578)
Q Consensus 156 ~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-------~~~~~~~-~---~~~Dl~~~i~ 224 (578)
.++..|+||++||++| ....++. +...... .+.+ +..||-=.-... ....+.. + .++.+.+.++
T Consensus 14 ~~p~~~~iilLHG~Gg-de~~~~~-~~~~~~P-~~~~--is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 14 GDPAAPLLILLHGLGG-DELDLVP-LPELILP-NATL--VSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCCCcEEEEEecCCC-Chhhhhh-hhhhcCC-CCeE--EcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 3567889999999954 4434433 3333332 2333 344442111000 0111110 0 1234455555
Q ss_pred HHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhh
Q 008093 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQL 302 (578)
Q Consensus 225 ~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~ 302 (578)
.+..+++ ..+++++|+|-||++++.....++. .++++++.++..-...
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~---------------------------- 138 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEP---------------------------- 138 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCC----------------------------
Confidence 5556664 4789999999999999999999988 7888887754321100
Q ss_pred hcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcc---hHH
Q 008093 303 HEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIP---WDE 379 (578)
Q Consensus 303 ~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~ 379 (578)
...-..-.+|+|+++|..||+||....+ ..+
T Consensus 139 ----------------------------------------------~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 139 ----------------------------------------------ELLPDLAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred ----------------------------------------------ccccccCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 0000112589999999999999987433 335
Q ss_pred HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 380 CRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 380 ~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
....-++....++ +||-.-.| ..+.+.+|+...
T Consensus 173 ~~~g~~v~~~~~~-~GH~i~~e--------~~~~~~~wl~~~ 205 (207)
T COG0400 173 TASGADVEVRWHE-GGHEIPPE--------ELEAARSWLANT 205 (207)
T ss_pred HHcCCCEEEEEec-CCCcCCHH--------HHHHHHHHHHhc
Confidence 5667788888888 99955333 456677787653
No 108
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.85 E-value=6.2e-08 Score=95.40 Aligned_cols=102 Identities=22% Similarity=0.153 Sum_probs=74.5
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
+|+++||.+| +...| ..+++.+...++.|+.++++|.+..... .....+=+...++.|+...+..|+.++|||
T Consensus 2 ~lf~~p~~gG-~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~~-----~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 2 PLFCFPPAGG-SASSY-RPLARALPDDVIGVYGIEYPGRGDDEPP-----PDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp EEEEESSTTC-SGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSHE-----ESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred eEEEEcCCcc-CHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCCC-----CCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 5899999965 66667 7899888765689999999999832111 111222234567778887788899999999
Q ss_pred hHHHHHHHHHhhcCCC-CCccEEEEEcCCc
Q 008093 242 IGANILVKYLGEEGEK-TPVAGAAAICSPW 270 (578)
Q Consensus 242 mGG~ial~ya~~~p~~-~~V~~~Vlis~p~ 270 (578)
+||.+|..+|.+..+. ..+..+++++++.
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999888654221 2688999999654
No 109
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.84 E-value=1.4e-07 Score=96.91 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=80.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHH-HHHHHhCCceEEEEeCCCCCCCCCCCCCCC---C--------CCchHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHL-VFNTAKRGWNVVVSNHRGLGGVSITSDCFY---N--------AGWTEDAREVIGY 225 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l-~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~---~--------~~~~~Dl~~~i~~ 225 (578)
+.+|++|.++|. |+...+.-+.+ +..|.+.|+..+++..+=||.-......-. + .+...+...++.|
T Consensus 90 ~~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 468999999998 67666555566 888999999999999999987543321100 0 1123577888899
Q ss_pred HHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 226 LHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 226 l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
+..+ +..++.+.|.||||.+|...++..|. ++..+-++++
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 9888 77799999999999999999998888 6665555543
No 110
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.83 E-value=2.3e-08 Score=95.61 Aligned_cols=159 Identities=19% Similarity=0.193 Sum_probs=107.7
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC-CCCCCCCCCCC--------CCCCCCchHHHHHHHHHHHHHCC
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH-RGLGGVSITSD--------CFYNAGWTEDAREVIGYLHHEYP 231 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~-RG~G~S~~~~~--------~~~~~~~~~Dl~~~i~~l~~~~~ 231 (578)
..||++--+.|-+... ++..+..++..||.|+++|+ ||=..++.... +........|+..++++++.+.+
T Consensus 40 ~~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4566665554545443 48899999999999999996 45222222111 11111223799999999998888
Q ss_pred CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccC
Q 008093 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLA 311 (578)
Q Consensus 232 ~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~ 311 (578)
..+|.++|+.|||-++..+....++ +.++|+.-+.+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps~----------------------------------------- 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPSF----------------------------------------- 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchh---heeeeEecCCc-----------------------------------------
Confidence 8899999999999999888777764 66666442110
Q ss_pred CHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH--HhcCCC--EE
Q 008093 312 NWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDE--CRANKN--VV 387 (578)
Q Consensus 312 d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~--~~~~~~--~~ 387 (578)
. ....+.++++|+|++.|+.|+++|++.+...+ ...++. ..
T Consensus 155 -------------------------~----------d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 155 -------------------------V----------DSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------C----------ChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 0 12345678899999999999999998554322 233333 35
Q ss_pred EEEeCCCCccccc
Q 008093 388 LATTWHGGHLAFF 400 (578)
Q Consensus 388 l~~~~~GGH~~~~ 400 (578)
+.++++-|| ||.
T Consensus 200 v~~f~g~~H-Gf~ 211 (242)
T KOG3043|consen 200 VKTFSGVGH-GFV 211 (242)
T ss_pred EEEcCCccc-hhh
Confidence 888888888 555
No 111
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.83 E-value=9.1e-08 Score=97.07 Aligned_cols=107 Identities=20% Similarity=0.324 Sum_probs=79.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCC-----CCCCCCCchHHHHHHHHHHHH---
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSITS-----DCFYNAGWTEDAREVIGYLHH--- 228 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~-----~~~~~~~~~~Dl~~~i~~l~~--- 228 (578)
++.+++++|..| --+.| ..+...|.++ .|.|++..+.||-.++... .+.| +..+.+...++.+++
T Consensus 2 ~~li~~IPGNPG-lv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~--sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPG-LVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLF--SLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCC-hHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCcc--CHHHHHHHHHHHHHHHhh
Confidence 468999999976 55556 7788877754 7999999999998766541 1222 333445544444443
Q ss_pred HC--CCCcEEEEEEchHHHHHHHHHhhcC-CCCCccEEEEEcCCc
Q 008093 229 EY--PKAPLFAIGTSIGANILVKYLGEEG-EKTPVAGAAAICSPW 270 (578)
Q Consensus 229 ~~--~~~~i~lvGhSmGG~ial~ya~~~p-~~~~V~~~Vlis~p~ 270 (578)
.+ +..+++++|||+|++++++.+.+.+ ...+|.+++++.|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 33 5778999999999999999999998 334799999999865
No 112
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.81 E-value=3.9e-08 Score=95.87 Aligned_cols=209 Identities=13% Similarity=0.079 Sum_probs=111.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH----CCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE----YPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~----~~~~ 233 (578)
..++.++++|=- |++.+.| +.+...+.. -+.++++.++|+|.--.. ....|+..+++.+... +.++
T Consensus 5 ~~~~~L~cfP~A-GGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPHA-GGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecCC-CCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCC
Confidence 355678888865 5566666 777776643 589999999999864222 1234555555555433 4577
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCC-CCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~-~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
|..++||||||+++...|...... ....++.+.+...........+... -+..+...++.+-...
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~-----~D~~~l~~l~~lgG~p--------- 140 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHL-----DDADFLADLVDLGGTP--------- 140 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCC-----CHHHHHHHHHHhCCCC---------
Confidence 999999999999999888664321 1344554444321111111111000 0111111111111000
Q ss_pred HHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc--cccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008093 313 WEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS--TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLAT 390 (578)
Q Consensus 313 ~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~--~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~ 390 (578)
..+.....+.+ .+.. .+..-|+..... ..-..+.+|+.++.|++|+.+..+.+..+.........+.+
T Consensus 141 -~e~led~El~~---l~LP------ilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~ 210 (244)
T COG3208 141 -PELLEDPELMA---LFLP------ILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRV 210 (244)
T ss_pred -hHHhcCHHHHH---HHHH------HHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEE
Confidence 00001111111 1100 011111111111 11256899999999999999998866533444556778888
Q ss_pred eCCCCcccccc
Q 008093 391 TWHGGHLAFFE 401 (578)
Q Consensus 391 ~~~GGH~~~~e 401 (578)
++ |||+-..+
T Consensus 211 fd-GgHFfl~~ 220 (244)
T COG3208 211 FD-GGHFFLNQ 220 (244)
T ss_pred ec-Ccceehhh
Confidence 77 68976554
No 113
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.80 E-value=3.9e-08 Score=101.37 Aligned_cols=97 Identities=20% Similarity=0.273 Sum_probs=73.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCCCCC--CC----CCchHHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITSDCF--YN----AGWTEDAREVIGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~~~~--~~----~~~~~Dl~~~i~~l~~~ 229 (578)
...|+|++-||. |+....| ..+++.+++.||-|.++|++| .|+.+...... +. .....|+..+++++.+.
T Consensus 69 ~~~PlvvlshG~-Gs~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 69 YLLPLVVLSHGS-GSYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred CcCCeEEecCCC-CCCccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 467999999999 4555556 789999999999999999999 45544322110 11 13347999999998876
Q ss_pred --CC-------CCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 230 --YP-------KAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 230 --~~-------~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
.| ..+|.++|||+||..++..++.+.+
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 12 3589999999999999988877654
No 114
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.78 E-value=2e-07 Score=89.21 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=60.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
++.+||+.++..+.-.+.+.+.+.+.|. .+.++|++- ..+++.+.++.+.+......+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7899999776666444566667777653 444444431 12344455555555555556999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
||||..|..++.+++- .+ |+|+|....
T Consensus 67 SlGG~~A~~La~~~~~----~a-vLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYGL----PA-VLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhCC----CE-EEEcCCCCH
Confidence 9999999988877754 33 889887654
No 115
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.75 E-value=3.5e-07 Score=105.20 Aligned_cols=240 Identities=16% Similarity=0.115 Sum_probs=149.3
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCc--cHHHHHHHH-HHHhCCceEE
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVF-NTAKRGWNVV 193 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~--~~yi~~l~~-~l~~~Gy~Vv 193 (578)
...+++..+ ||.+..+-...|+..+ ....-|+++.+||-.++-. +.+.-.+.. .+...|+.|+
T Consensus 497 ~~~~~~i~~---~~~~~~~~~~lP~~~~-----------~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~ 562 (755)
T KOG2100|consen 497 IVEFGKIEI---DGITANAILILPPNFD-----------PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVL 562 (755)
T ss_pred cceeEEEEe---ccEEEEEEEecCCCCC-----------CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEE
Confidence 344444433 8877766666665422 2345689999999765211 111112222 4567899999
Q ss_pred EEeCCCCCCCCCCCC----CCCCCCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 194 VSNHRGLGGVSITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 194 v~D~RG~G~S~~~~~----~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
.+|.||-|+....-. +.......+|...+++.+.+.. +..++.++|+|.||.++++.++..++. -++++++++
T Consensus 563 ~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvava 641 (755)
T KOG2100|consen 563 QVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVA 641 (755)
T ss_pred EEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEec
Confidence 999999886543211 1112235678888888887654 456899999999999999999998741 577779998
Q ss_pred CCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCC-HHHHHHhC
Q 008093 268 SPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFET-VDTYYRNC 346 (578)
Q Consensus 268 ~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~-~~~yy~~~ 346 (578)
|..|..-. +....+ ...|... -..-|.+.
T Consensus 642 PVtd~~~y-------------ds~~te-------------------------------------rymg~p~~~~~~y~e~ 671 (755)
T KOG2100|consen 642 PVTDWLYY-------------DSTYTE-------------------------------------RYMGLPSENDKGYEES 671 (755)
T ss_pred ceeeeeee-------------cccccH-------------------------------------hhcCCCccccchhhhc
Confidence 87665311 100000 0001110 01115556
Q ss_pred CcccccCCCccce-EEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 347 SSSTYVGNVSIPL-LCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 347 s~~~~l~~I~vPv-LiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+....+.+++.|. |++||..|.-|+.+.... .+....-...+.++++-.|-...- ....-+...+..|+....
T Consensus 672 ~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~---~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 672 SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV---EVISHLYEKLDRFLRDCF 748 (755)
T ss_pred cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc---cchHHHHHHHHHHHHHHc
Confidence 6667777887777 999999999998773221 233344448999999999955443 112346778888988654
Q ss_pred CC
Q 008093 423 SS 424 (578)
Q Consensus 423 ~~ 424 (578)
..
T Consensus 749 ~~ 750 (755)
T KOG2100|consen 749 GS 750 (755)
T ss_pred Cc
Confidence 43
No 116
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.75 E-value=1.3e-08 Score=105.42 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=76.2
Q ss_pred eeEEE--EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHH-----------------HHH
Q 008093 120 YRRQL--FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----------------IRH 180 (578)
Q Consensus 120 y~r~~--l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~y-----------------i~~ 180 (578)
|+++. |.+.++..+....+.|... +.+.|.||++||-+++ .+.. -..
T Consensus 86 Y~~EKv~f~~~p~~~vpaylLvPd~~-------------~~p~PAVL~lHgHg~~-Ke~~~g~~gv~~~~~~~~~~~~~~ 151 (390)
T PF12715_consen 86 YTREKVEFNTTPGSRVPAYLLVPDGA-------------KGPFPAVLCLHGHGGG-KEKMAGEDGVSPDLKDDYDDPKQD 151 (390)
T ss_dssp EEEEEEEE--STTB-EEEEEEEETT---------------S-EEEEEEE--TT---HHHHCT---SSGCG--STTSTTT-
T ss_pred eEEEEEEEEccCCeeEEEEEEecCCC-------------CCCCCEEEEeCCCCCC-cccccCCcccccccchhhcccccc
Confidence 44443 4445677777666665331 3567899999997443 2211 123
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCCCC--CC------------CCc------hHHHHHHHHHHHHHC--CCCcEEEE
Q 008093 181 LVFNTAKRGWNVVVSNHRGLGGVSITSDCF--YN------------AGW------TEDAREVIGYLHHEY--PKAPLFAI 238 (578)
Q Consensus 181 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~------------~~~------~~Dl~~~i~~l~~~~--~~~~i~lv 238 (578)
++..|+++||-|+++|.+|+|......... .+ .|+ ..|...+++++..+- ...+|.++
T Consensus 152 ~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~ 231 (390)
T PF12715_consen 152 YGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCM 231 (390)
T ss_dssp HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEE
T ss_pred HHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEE
Confidence 578899999999999999999754322111 00 111 135555888887653 35689999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
|+||||..++.+++-.+ +|+++|..+-.
T Consensus 232 GfSmGg~~a~~LaALDd---RIka~v~~~~l 259 (390)
T PF12715_consen 232 GFSMGGYRAWWLAALDD---RIKATVANGYL 259 (390)
T ss_dssp EEGGGHHHHHHHHHH-T---T--EEEEES-B
T ss_pred eecccHHHHHHHHHcch---hhHhHhhhhhh
Confidence 99999999998877765 58888876543
No 117
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.74 E-value=8.9e-07 Score=92.01 Aligned_cols=252 Identities=14% Similarity=0.106 Sum_probs=138.0
Q ss_pred EEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCC-ccHHHHHHHHHH-HhCCceEEEEeCCC
Q 008093 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDS-AASYIRHLVFNT-AKRGWNVVVSNHRG 199 (578)
Q Consensus 125 l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s-~~~yi~~l~~~l-~~~Gy~Vvv~D~RG 199 (578)
++....+.+..+.|.|.... .....|+||++||.+ |+. ...| ..+...+ .+.+..|+.+|||=
T Consensus 66 v~~~~~~~l~vRly~P~~~~-----------~~~~~p~lvyfHGGGf~~~S~~~~~y-~~~~~~~a~~~~~vvvSVdYRL 133 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSS-----------SETKLPVLVYFHGGGFCLGSANSPAY-DSFCTRLAAELNCVVVSVDYRL 133 (336)
T ss_pred eEecCCCCeEEEEEcCCCCC-----------cccCceEEEEEeCCccEeCCCCCchh-HHHHHHHHHHcCeEEEecCccc
Confidence 34445555777777764421 115789999999943 221 2244 6666666 45689999999995
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHH------CCCCcEEEEEEchHHHHHHHHHhhcC----CCCCccEEEEEcCC
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHE------YPKAPLFAIGTSIGANILVKYLGEEG----EKTPVAGAAAICSP 269 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~------~~~~~i~lvGhSmGG~ial~ya~~~p----~~~~V~~~Vlis~p 269 (578)
--..+.+ ...+|..+++.|+.+. .+..+++++|-|.||+||..++.+.. ....++|.|++-|.
T Consensus 134 APEh~~P-------a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 134 APEHPFP-------AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CCCCCCC-------ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 5443322 2347777777777664 24567999999999999998876543 23479999999887
Q ss_pred cchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc
Q 008093 270 WDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 349 (578)
Q Consensus 270 ~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~ 349 (578)
+........-.+..... ...........+.....+.- . ...+..+.-+... +..
T Consensus 207 ~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~w~~~lP~~---~-----------~~~~~p~~np~~~-----------~~~ 260 (336)
T KOG1515|consen 207 FQGTDRTESEKQQNLNG-SPELARPKIDKWWRLLLPNG---K-----------TDLDHPFINPVGN-----------SLA 260 (336)
T ss_pred cCCCCCCCHHHHHhhcC-CcchhHHHHHHHHHHhCCCC---C-----------CCcCCcccccccc-----------ccc
Confidence 65433211100000000 00000000000000000000 0 0001000000000 011
Q ss_pred cccCCCcc-ceEEEEeCCCCCCCCC-CcchHHHhcCCCEEEEEeCCCCccccccccc-cCcccHHHHHHHHHHhh
Q 008093 350 TYVGNVSI-PLLCISSLDDPVCTVE-AIPWDECRANKNVVLATTWHGGHLAFFEGLT-AAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 350 ~~l~~I~v-PvLiI~g~dDpivp~~-~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~-~~~~w~~~~v~eFL~~~ 421 (578)
....-..+ |+|++.++.|.+.... .+...+.+..-.+++..+++|+|..++-... .....+.+.+.+|++..
T Consensus 261 ~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 261 KDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 12223344 5999999999998665 2333455566667788899999988775321 12234667788887753
No 118
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.73 E-value=4.6e-07 Score=93.07 Aligned_cols=231 Identities=19% Similarity=0.125 Sum_probs=118.8
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCc--hHHHHHHHHHHHHHC------CCCcEEEEEEchHHHHHHHH
Q 008093 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGW--TEDAREVIGYLHHEY------PKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 179 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~--~~Dl~~~i~~l~~~~------~~~~i~lvGhSmGG~ial~y 250 (578)
..++..+.++||.|++.||.|.|. + |..+. ..++.+.++..++.. .+.+++++|||-||.-++..
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~-~------y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGT-P------YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCC-c------ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 456677788999999999999987 2 22221 134444444444322 24689999999999887654
Q ss_pred Hh---hcCCCCC--ccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHH---HHh--ccC
Q 008093 251 LG---EEGEKTP--VAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWE---GIK--KSR 320 (578)
Q Consensus 251 a~---~~p~~~~--V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~---~i~--~~~ 320 (578)
+. ++..+.. +.|+++.++|.|+......+.......++...+. ++..........+....... .+. ...
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~-gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~ 167 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALL-GLAAAYPELDELLDSYLTPEGRALLDDARTR 167 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHH-HHHHhCccHHHHHHHHhhHHHHHHHHHHHhh
Confidence 42 3333345 8899999888887654333222111111111111 11110000000000000000 000 000
Q ss_pred CHHHHH-hhhhhcc-----CCCC---------CHHHHHHhCCc-ccccCCCccceEEEEeCCCCCCCCCCcc---hHHHh
Q 008093 321 SIRDFD-SHATCLV-----GKFE---------TVDTYYRNCSS-STYVGNVSIPLLCISSLDDPVCTVEAIP---WDECR 381 (578)
Q Consensus 321 s~~efd-~~~~~~~-----~g~~---------~~~~yy~~~s~-~~~l~~I~vPvLiI~g~dDpivp~~~~~---~~~~~ 381 (578)
...+.. ....... .-+. .+...+.+.+. ...-..-++|+++.+|.+|.++|..... ...|+
T Consensus 168 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~ 247 (290)
T PF03583_consen 168 CLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCA 247 (290)
T ss_pred hHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHH
Confidence 011000 0000000 0011 12233333322 0011233799999999999999987433 34677
Q ss_pred cC-CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 382 AN-KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 382 ~~-~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.. .++++..++.++|..-.-. ......+||...++.
T Consensus 248 ~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 248 AGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAG 284 (290)
T ss_pred cCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCC
Confidence 78 6999999999999875431 124566777776544
No 119
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.71 E-value=6.9e-08 Score=100.50 Aligned_cols=109 Identities=19% Similarity=0.224 Sum_probs=83.7
Q ss_pred CcEEEEECCCCCCCccHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHHCCC
Q 008093 160 TPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPK 232 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~ 232 (578)
++.++++|-+.. ..|| +.++..+.++|..|+++++++=..+.. .+. ..... +++.+.++.+++..+.
T Consensus 107 ~~PlLiVpP~iN---k~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~-~edYi~e~l~~aid~v~~itg~ 180 (445)
T COG3243 107 KRPLLIVPPWIN---KFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKN-LEDYILEGLSEAIDTVKDITGQ 180 (445)
T ss_pred CCceEeeccccC---ceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hcc-HHHHHHHHHHHHHHHHHHHhCc
Confidence 344778887642 2233 578899999999999999987554432 111 12233 7888899999998888
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhh
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~ 275 (578)
.+|.++|++.||+++..+++..+.. +|+.++++.+++|+...
T Consensus 181 ~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~ 222 (445)
T COG3243 181 KDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHA 222 (445)
T ss_pred cccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccc
Confidence 8999999999999999999888874 59999999999987653
No 120
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.70 E-value=1e-07 Score=95.48 Aligned_cols=113 Identities=22% Similarity=0.395 Sum_probs=71.5
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHH-hCCc--e--EEEEeCCCC----CCCCCC--CCC---CCC-------CCchH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGW--N--VVVSNHRGL----GGVSIT--SDC---FYN-------AGWTE 217 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~-~~Gy--~--Vvv~D~RG~----G~S~~~--~~~---~~~-------~~~~~ 217 (578)
..| .||+||+.|+..+ + ..++..+. +.|. . ++-++--|+ |.-... .|- .|. ...+.
T Consensus 11 ~tP-TifihG~~gt~~s-~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 11 TTP-TIFIHGYGGTANS-F-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -EE-EEEE--TTGGCCC-C-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCc-EEEECCCCCChhH-H-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 445 6699999765544 4 78899987 6664 2 333444442 221111 110 011 12345
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCC---CccEEEEEcCCcchhh
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT---PVAGAAAICSPWDLLI 274 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~---~V~~~Vlis~p~d~~~ 274 (578)
-+..++.+++++|.-.++.+|||||||..++.|+..++.+. .+..+|.|++|++...
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 78889999999999999999999999999999998876532 5899999999998754
No 121
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.69 E-value=5.9e-07 Score=88.10 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=72.8
Q ss_pred CCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCC-----CCCCCCCCCchHHHHHHHHHHHHHCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSI-----TSDCFYNAGWTEDAREVIGYLHHEYP 231 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~-----~~~~~~~~~~~~Dl~~~i~~l~~~~~ 231 (578)
..|+||++||.++ +.+.+.. .+.....++||-|+.++...-..... ........+....+.++++++..+++
T Consensus 15 ~~PLVv~LHG~~~-~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQ-SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCC-CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 5799999999955 4444432 12334445799999888532111100 00011112345567888999988884
Q ss_pred --CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 232 --KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 232 --~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
..+|++.|+|.||+++..++..+|+ .++++..++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 5689999999999999999999999 78887776653
No 122
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.69 E-value=4.2e-07 Score=91.33 Aligned_cols=249 Identities=14% Similarity=0.169 Sum_probs=119.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHH----HHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLV----FNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~----~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
..+|++|-.|-++-++.+.| ..+. .....+.|.++=+|.+|+..-...-+..|.+--.+++.+.+..+.+.++-.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk 99 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK 99 (283)
T ss_dssp TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT--
T ss_pred CCCceEEEeccccccchHHH-HHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc
Confidence 36899999998843333323 2221 112235799999999998765444444444444455555555555555556
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHH-HHHHHHHHHhHHHHHhhhcccccccCC
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ-KIYDRALTIGLQDYAQLHEPRYSRLAN 312 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~-~~~~~~l~~~l~~~~~~~~~~l~~~~d 312 (578)
.++.+|--.||+|..+||..+|+ +|.|+|+|++.........+...++.. .++..-++..+..++..|. +.
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~------Fg 171 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHY------FG 171 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHH------S-
T ss_pred EEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcc------cc
Confidence 79999999999999999999999 999999998765443333332222211 1111112222333322221 00
Q ss_pred HHHHhc-cCCHHHHHhhhhhccCCCCC----HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE
Q 008093 313 WEGIKK-SRSIRDFDSHATCLVGKFET----VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVV 387 (578)
Q Consensus 313 ~~~i~~-~~s~~efd~~~~~~~~g~~~----~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~ 387 (578)
.+.... ...+..+...+.... .-.+ ++.|.++.+....++...||+|++.|+..|....- +.........+..
T Consensus 172 ~~~~~~n~Dlv~~yr~~l~~~~-Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v-v~~ns~Ldp~~tt 249 (283)
T PF03096_consen 172 KEEEENNSDLVQTYRQHLDERI-NPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV-VEMNSKLDPTKTT 249 (283)
T ss_dssp HHHHHCT-HHHHHHHHHHHT-T-THHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH-HHHHHHS-CCCEE
T ss_pred cccccccHHHHHHHHHHHhcCC-CHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH-HHHHhhcCcccce
Confidence 010000 001112222211111 0012 23333333444456677899999999998876432 2222223445688
Q ss_pred EEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 388 LATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 388 l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
++.++++|=+...|. |.+ +.+.+.=|++-+
T Consensus 250 llkv~dcGglV~eEq--P~k--laea~~lFlQG~ 279 (283)
T PF03096_consen 250 LLKVADCGGLVLEEQ--PGK--LAEAFKLFLQGM 279 (283)
T ss_dssp EEEETT-TT-HHHH---HHH--HHHHHHHHHHHT
T ss_pred EEEecccCCcccccC--cHH--HHHHHHHHHccC
Confidence 999999987777773 444 777777777654
No 123
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.68 E-value=3.2e-07 Score=90.70 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=74.0
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHh--------CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAK--------RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY- 230 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~--------~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~- 230 (578)
+..|||+||..|+... + +.++..+.+ ..++++.+|+...... .. ... -....+-+.+.++++.+.+
T Consensus 4 g~pVlFIhG~~Gs~~q-~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~~-l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQ-V-RSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GRT-LQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHhH-H-HHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-ccc-HHHHHHHHHHHHHHHHHhhh
Confidence 4569999999775443 3 566655522 2588999998764211 11 111 1123456777788887776
Q ss_pred ----CCCcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCcchh
Q 008093 231 ----PKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDLL 273 (578)
Q Consensus 231 ----~~~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~d~~ 273 (578)
+..++++|||||||.++-.++..... ...|+.+|.+++|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 67899999999999998887765442 22699999999997554
No 124
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.60 E-value=1.4e-06 Score=80.79 Aligned_cols=176 Identities=15% Similarity=0.187 Sum_probs=99.0
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
+.+|++||+.|+....|....-..+.. +-.+++. ....+ ....|++-+. +.+... ..++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w~~P--~~~dWi~~l~---~~v~a~--~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DWEAP--VLDDWIARLE---KEVNAA--EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CCCCC--CHHHHHHHHH---HHHhcc--CCCeEEEEe
Confidence 358999999888777774433333221 1111111 00101 0112222222 233222 346999999
Q ss_pred chHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccC
Q 008093 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (578)
Q Consensus 241 SmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~ 320 (578)
|+|+.++++|+.+... +|.|+.++++|.--... . . ..
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~---~-~-------------------------------------~~ 103 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPE---I-R-------------------------------------PK 103 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCCccccc---c-c-------------------------------------hh
Confidence 9999999999998877 89999999876421100 0 0 00
Q ss_pred CHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccc
Q 008093 321 SIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFF 400 (578)
Q Consensus 321 s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~ 400 (578)
....|+ .....+..-|.+++.+++||+++.+......... ...++.+.+|||+---
T Consensus 104 ~~~tf~----------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~ 159 (181)
T COG3545 104 HLMTFD----------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAE 159 (181)
T ss_pred hccccC----------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchh
Confidence 000000 0123344579999999999999988554432222 3467888899998755
Q ss_pred cccccCcccHHHHHHHHHHh
Q 008093 401 EGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 401 eg~~~~~~w~~~~v~eFL~~ 420 (578)
.|..+-+ .....+.+|+.+
T Consensus 160 sG~g~wp-eg~~~l~~~~s~ 178 (181)
T COG3545 160 SGFGPWP-EGYALLAQLLSR 178 (181)
T ss_pred hcCCCcH-HHHHHHHHHhhh
Confidence 5532211 133455555544
No 125
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=1e-06 Score=95.08 Aligned_cols=239 Identities=17% Similarity=0.118 Sum_probs=142.9
Q ss_pred CCCCCCeeE-EEE--EecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCC-------CccHHHHHHHH
Q 008093 114 RPPCFSYRR-QLF--RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSD-------SAASYIRHLVF 183 (578)
Q Consensus 114 ~~~~~~y~r-~~l--~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~-------s~~~yi~~l~~ 183 (578)
..+.+.|.- ++| ..+.|.++..-.+.|... ....+-|+|+++-|-.+- ..-.|+| ..
T Consensus 604 ~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-----------~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~ 670 (867)
T KOG2281|consen 604 APPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-----------QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FC 670 (867)
T ss_pred CCCCCccCChhheeeecCCCcEEEEEEEccccC-----------CCCCCCceEEEEcCCCceEEeeccccceehhh--hh
Confidence 344455544 444 665566665555555332 113457899999985431 1123333 24
Q ss_pred HHHhCCceEEEEeCCCCCCCCCCCCCC--C--CCCchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 184 NTAKRGWNVVVSNHRGLGGVSITSDCF--Y--NAGWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 184 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~--~~~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
.|+..||.|+++|.||...-...-... . ..-..+|-.+-++++..+++ -.++.+.|+|+||++++..+.++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 577899999999999955432221110 1 11234788888999988874 5689999999999999999999998
Q ss_pred CCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCC
Q 008093 257 KTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF 336 (578)
Q Consensus 257 ~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~ 336 (578)
-++.+|+=+ |.... ..|+. .+|.+.-|+
T Consensus 751 --IfrvAIAGa-pVT~W------------~~YDT-------------------------------------gYTERYMg~ 778 (867)
T KOG2281|consen 751 --IFRVAIAGA-PVTDW------------RLYDT-------------------------------------GYTERYMGY 778 (867)
T ss_pred --eeeEEeccC-cceee------------eeecc-------------------------------------cchhhhcCC
Confidence 555555433 32110 01111 111111222
Q ss_pred C-CHHHHHHhCCccc---ccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCccc
Q 008093 337 E-TVDTYYRNCSSST---YVGNVSIPLLCISSLDDPVCTVEAIPW---DECRANKNVVLATTWHGGHLAFFEGLTAAGMW 409 (578)
Q Consensus 337 ~-~~~~yy~~~s~~~---~l~~I~vPvLiI~g~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w 409 (578)
. .-++-|...|... .+.+=.-.+|++||-=|.-|...+... ...++++.-++.++|+-.|..=-- .....
T Consensus 779 P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~---es~~~ 855 (867)
T KOG2281|consen 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNP---ESGIY 855 (867)
T ss_pred CccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCC---ccchh
Confidence 2 1112222222222 233334569999999999888764433 356788889999999999965322 12236
Q ss_pred HHHHHHHHHHh
Q 008093 410 WVRAVNEYLGV 420 (578)
Q Consensus 410 ~~~~v~eFL~~ 420 (578)
+...+..|+++
T Consensus 856 yE~rll~FlQ~ 866 (867)
T KOG2281|consen 856 YEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhh
Confidence 78889999875
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.57 E-value=2.4e-07 Score=87.29 Aligned_cols=185 Identities=15% Similarity=0.102 Sum_probs=113.3
Q ss_pred CCCcEEEEECCC---CCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl---~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
...|+.||+||- .|+... . -..+..+.++||+|+.++|--+... +. ...-..|+..-++++.+.+++.+
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~-c-lsiv~~a~~~gY~vasvgY~l~~q~-----ht-L~qt~~~~~~gv~filk~~~n~k 136 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKM-C-LSIVGPAVRRGYRVASVGYNLCPQV-----HT-LEQTMTQFTHGVNFILKYTENTK 136 (270)
T ss_pred CCccEEEEEecchhhcCchhc-c-cchhhhhhhcCeEEEEeccCcCccc-----cc-HHHHHHHHHHHHHHHHHhcccce
Confidence 456899999992 122221 1 3567778899999999976322211 00 11234688888999999998764
Q ss_pred -EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCH
Q 008093 235 -LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANW 313 (578)
Q Consensus 235 -i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~ 313 (578)
+.+-|||.|+.+++....+..+ .+|.|+++.|+.+++..-...
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~~t----------------------------------- 180 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELSNT----------------------------------- 180 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHhCC-----------------------------------
Confidence 7778999999999998877543 379998888877665321000
Q ss_pred HHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcc-cccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008093 314 EGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS-TYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTW 392 (578)
Q Consensus 314 ~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~-~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~ 392 (578)
.+.. | -|..+ +--+.+||. ..+..+++|+|++.|+.|.---.+.- ++.........+..++
T Consensus 181 ------e~g~--d-------lgLt~--~~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQn-rdf~~q~~~a~~~~f~ 242 (270)
T KOG4627|consen 181 ------ESGN--D-------LGLTE--RNAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQN-RDFADQLRKASFTLFK 242 (270)
T ss_pred ------cccc--c-------cCccc--chhhhcCccHHHhcCceeeeeEeeecccCcHHHHhh-hhHHHHhhhcceeecC
Confidence 0000 0 00000 000122332 45678899999999998832111111 1223333457888999
Q ss_pred CCCccccccccc
Q 008093 393 HGGHLAFFEGLT 404 (578)
Q Consensus 393 ~GGH~~~~eg~~ 404 (578)
+.+|...++...
T Consensus 243 n~~hy~I~~~~~ 254 (270)
T KOG4627|consen 243 NYDHYDIIEETA 254 (270)
T ss_pred CcchhhHHHHhc
Confidence 999999888643
No 127
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.54 E-value=2.1e-07 Score=98.96 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=62.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC-C-C-CCC-----C-----C-------CCC---C
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV-S-I-TSD-----C-----F-------YNA---G 214 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S-~-~-~~~-----~-----~-------~~~---~ 214 (578)
..-|+|||-||++| +...| ..++..|+.+||-|+++|+|..-.. . . ... . . +.. .
T Consensus 98 ~~~PvvIFSHGlgg-~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGG-SRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT---TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCc-chhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 45799999999955 55567 7899999999999999999954211 0 0 000 0 0 000 0
Q ss_pred ------------chHHHHHHHHHHHHHC----------------------CCCcEEEEEEchHHHHHHHHHhhcCCCCCc
Q 008093 215 ------------WTEDAREVIGYLHHEY----------------------PKAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (578)
Q Consensus 215 ------------~~~Dl~~~i~~l~~~~----------------------~~~~i~lvGhSmGG~ial~ya~~~p~~~~V 260 (578)
...|+..+++.+.+.. .-.++.++|||+||..++..+.... ++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~---r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT---RF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T---T-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc---Cc
Confidence 0246777777775311 1236999999999999998887763 69
Q ss_pred cEEEEEcC
Q 008093 261 AGAAAICS 268 (578)
Q Consensus 261 ~~~Vlis~ 268 (578)
+++|++++
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99998854
No 128
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.53 E-value=5e-06 Score=84.85 Aligned_cols=118 Identities=19% Similarity=0.213 Sum_probs=81.5
Q ss_pred CeeEEEEEecCCcEE-EEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHH-----HHHHHHHHhCCceE
Q 008093 119 SYRRQLFRLSDGGMI-ALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI-----RHLVFNTAKRGWNV 192 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i-~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi-----~~l~~~l~~~Gy~V 192 (578)
.++|..+.. |+..| ++....+ + ..+...||++-|.++.-...++ ..+...+.+.|-+|
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~-~--------------a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNv 174 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQP-E--------------AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANV 174 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCC-C--------------CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcE
Confidence 457777776 77665 3332211 1 2345679999998544333222 23445555678999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC---CCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 193 VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 193 vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~---~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
+++||||.|.|.+... ......|..++++|++++. ....|++.|||+||.++...+..+.
T Consensus 175 l~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 175 LVFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred EEECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 9999999999976643 2466789999999998643 2357999999999999988766653
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.46 E-value=1.5e-06 Score=82.16 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=77.9
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
.+|++-|=+|-. ..-+.++..|+++|+.|+.+|-+-+=.+..+ | .....|+.+++++..++.+..+++++|+|
T Consensus 4 ~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-P----~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSERT-P----EQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhhCC-H----HHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 577888864433 3347889999999999999998765444333 2 23468999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCC--CCccEEEEEcCC
Q 008093 242 IGANILVKYLGEEGEK--TPVAGAAAICSP 269 (578)
Q Consensus 242 mGG~ial~ya~~~p~~--~~V~~~Vlis~p 269 (578)
+|+-++-....+.|.. .+|+.++++++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9998888777766642 268899988764
No 130
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.44 E-value=1.4e-07 Score=92.43 Aligned_cols=90 Identities=13% Similarity=0.174 Sum_probs=58.0
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
|||+||..++....| ..+++.|.++||. ++++++-...................+++++|+.+++..+. ++-+||
T Consensus 4 VVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred EEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 889999977566667 7889999999999 79999944433211100000112346888999999887777 999999
Q ss_pred EchHHHHHHHHHhhc
Q 008093 240 TSIGANILVKYLGEE 254 (578)
Q Consensus 240 hSmGG~ial~ya~~~ 254 (578)
|||||.++-.|+...
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999998887543
No 131
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.40 E-value=1.3e-05 Score=79.81 Aligned_cols=123 Identities=14% Similarity=0.136 Sum_probs=72.3
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCC-cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC---CCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTT-PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG---GVS 204 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~-PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G---~S~ 204 (578)
-|..+.+..+.|.+- ..+..- |.|||+||-+......+ ..+ + .|.-.++.+.+-.+ .++
T Consensus 170 tgneLkYrly~Pkdy-----------~pdkky~PLvlfLHgagq~g~dn~-~~l---~--sg~gaiawa~pedqcfVlAP 232 (387)
T COG4099 170 TGNELKYRLYTPKDY-----------APDKKYYPLVLFLHGAGQGGSDND-KVL---S--SGIGAIAWAGPEDQCFVLAP 232 (387)
T ss_pred cCceeeEEEeccccc-----------CCCCccccEEEEEecCCCCCchhh-hhh---h--cCccceeeecccCceEEEcc
Confidence 466777777777542 223333 99999999854444444 221 1 12333333333322 011
Q ss_pred CCCCCCCC------CCchHHHHHHHH-HHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 205 ITSDCFYN------AGWTEDAREVIG-YLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 205 ~~~~~~~~------~~~~~Dl~~~i~-~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
--.+ .+. .........+++ -+..+| +..+|+++|.|+||.-++.++.++|+ .+++++.||+.+|
T Consensus 233 Qy~~-if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d 305 (387)
T COG4099 233 QYNP-IFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGD 305 (387)
T ss_pred cccc-cccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCc
Confidence 0000 000 111122333333 444555 35689999999999999999999999 8999999998775
No 132
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.36 E-value=1.1e-06 Score=95.00 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 176 SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 176 ~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
.|+..+++.|.+.||.+ ..|++|+|.+-..... .....+++.+.++.+.+.++..+++++||||||.++..++..++
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 45689999999999866 7899999987443211 12345889999999988888889999999999999999998876
Q ss_pred CC--CCccEEEEEcCCcchhh
Q 008093 256 EK--TPVAGAAAICSPWDLLI 274 (578)
Q Consensus 256 ~~--~~V~~~Vlis~p~d~~~ 274 (578)
+. ..|+.+|++++|++...
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HhHHhHhccEEEECCCCCCCc
Confidence 52 25899999999987653
No 133
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.34 E-value=1.3e-06 Score=85.63 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=79.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC----C--
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----P-- 231 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~----~-- 231 (578)
..-|+|+|+||+. -..+.| ..+..+++.+||-|+++++-..-. + ......++..++++|+.... |
T Consensus 44 G~yPVilF~HG~~-l~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-----p--~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 44 GTYPVILFLHGFN-LYNSFY-SQLLAHIASHGFIVVAPQLYTLFP-----P--DGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CCccEEEEeechh-hhhHHH-HHHHHHHhhcCeEEEechhhcccC-----C--CchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 4569999999994 456666 888899999999999999865321 1 12345678889999987653 2
Q ss_pred ----CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 232 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 232 ----~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
-.++.++|||.||-.|..+|..+..+..+.++|.++|.
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35899999999999999988877655578888888764
No 134
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.30 E-value=4.7e-07 Score=94.49 Aligned_cols=108 Identities=18% Similarity=0.258 Sum_probs=67.4
Q ss_pred CCCCcEEEEECCCCCCC-ccHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCCCCCCCC--Cch----HHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDS-AASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSITSDCFYNA--GWT----EDAREVIGYL 226 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s-~~~yi~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~~~~~~~--~~~----~Dl~~~i~~l 226 (578)
+..+|++|++|||.++. ...|+..+...+.++ +++|+++|+...... .|.. ..+ ..+..++..+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFL 141 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHH
Confidence 46789999999998877 567778888876654 799999999643221 1221 112 3555666666
Q ss_pred HHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 227 HHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 227 ~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
... .+.+++++|||||||.++...........+|..++.++|..
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 633 35678999999999999986555544323688888888754
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.27 E-value=1.1e-06 Score=86.14 Aligned_cols=155 Identities=19% Similarity=0.112 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHH
Q 008093 217 EDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTI 294 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~ 294 (578)
+-+.+++++++++- ...+|.++|.|.||-+++.++..++. |+++|+++++.-............ +
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~~~~~~~~~~~~------~---- 70 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVVFQGIGFYRDSS------K---- 70 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB--SSEEEETTE------------
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeEecchhcccCCC------c----
Confidence 45788999998763 23689999999999999999999985 999999987653332211110000 0
Q ss_pred hHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCC
Q 008093 295 GLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (578)
Q Consensus 295 ~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~ 374 (578)
..+.+. .+....... ..........+....+- ....+.-.+++|++|+|+|.|+||.+.|...
T Consensus 71 --------~lp~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~a~IpvE~i~~piLli~g~dD~~WpS~~ 133 (213)
T PF08840_consen 71 --------PLPYLP--FDISKFSWN------EPGLLRSRYAFELADDK-AVEEARIPVEKIKGPILLISGEDDQIWPSSE 133 (213)
T ss_dssp --------EE------B-GGG-EE-------TTS-EE-TT-B--TTTG-GGCCCB--GGG--SEEEEEEETT-SSS-HHH
T ss_pred --------cCCcCC--cChhhceec------CCcceehhhhhhccccc-ccccccccHHHcCCCEEEEEeCCCCccchHH
Confidence 000000 000000000 00000000000000000 0111223578899999999999999998763
Q ss_pred cch----HHHh-cCC-CEEEEEeCCCCcccccc
Q 008093 375 IPW----DECR-ANK-NVVLATTWHGGHLAFFE 401 (578)
Q Consensus 375 ~~~----~~~~-~~~-~~~l~~~~~GGH~~~~e 401 (578)
... .+.+ ..+ +.+++.++++||+....
T Consensus 134 ~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~P 166 (213)
T PF08840_consen 134 MAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPP 166 (213)
T ss_dssp HHHHHHHHHHCTT-----EEEEETTB-S---ST
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCCCCceecCC
Confidence 332 1112 223 57889999999987543
No 136
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.23 E-value=3.8e-05 Score=76.58 Aligned_cols=218 Identities=16% Similarity=0.129 Sum_probs=120.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC--CcEEEEEE
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGT 240 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~lvGh 240 (578)
+|++=||.| +....+...+....+.|++++.+-.+-....... .+...-+..+++.+.+.... .++++..+
T Consensus 2 lvvl~gW~g-A~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMG-AKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCC-CCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 567778865 4544556667777789999999866532211110 12223334455555443322 38999999
Q ss_pred chHHHHHHHHHhh----cC---CCC-CccEEEEEcCCcchhh--hhHHHhhHHHHH----HH--HHHHHHhHHHHHhhhc
Q 008093 241 SIGANILVKYLGE----EG---EKT-PVAGAAAICSPWDLLI--GDRFIGRRLIQK----IY--DRALTIGLQDYAQLHE 304 (578)
Q Consensus 241 SmGG~ial~ya~~----~p---~~~-~V~~~Vlis~p~d~~~--~~~~l~~~~~~~----~~--~~~l~~~l~~~~~~~~ 304 (578)
|.||...+..+.+ .. ... +++|.|.-|+|..... ....+....... ++ ...+...+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 149 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLS----- 149 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-----
Confidence 9988887765442 11 111 3899999988854322 111111000000 00 00000000000
Q ss_pred ccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHh
Q 008093 305 PRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECR 381 (578)
Q Consensus 305 ~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~ 381 (578)
.......+......++.............+|-|+|.+++|++++.+.++.. ..+
T Consensus 150 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~ 206 (240)
T PF05705_consen 150 -----------------------IISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARR 206 (240)
T ss_pred -----------------------HHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHH
Confidence 000011233333344433322233345579999999999999999866542 234
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008093 382 ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYL 418 (578)
Q Consensus 382 ~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL 418 (578)
..-.+.....++++|++++. .++..+.+.+.+|+
T Consensus 207 ~G~~V~~~~f~~S~HV~H~r---~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 207 KGWDVRAEKFEDSPHVAHLR---KHPDRYWRAVDEFW 240 (240)
T ss_pred cCCeEEEecCCCCchhhhcc---cCHHHHHHHHHhhC
Confidence 45568888999999999998 34445778888773
No 137
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.19 E-value=1.3e-05 Score=80.98 Aligned_cols=135 Identities=19% Similarity=0.175 Sum_probs=90.4
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
.-..+|-.+...||.+|..-+...... ...+....||++-|..|--.- ..+..-++.||.|+.+|
T Consensus 211 ~~NG~R~kiks~dgneiDtmF~d~r~n-----------~~~ngq~LvIC~EGNAGFYEv----G~m~tP~~lgYsvLGwN 275 (517)
T KOG1553|consen 211 NKNGQRLKIKSSDGNEIDTMFLDGRPN-----------QSGNGQDLVICFEGNAGFYEV----GVMNTPAQLGYSVLGWN 275 (517)
T ss_pred cCCCeEEEEeecCCcchhheeecCCCC-----------CCCCCceEEEEecCCccceEe----eeecChHHhCceeeccC
Confidence 345677788888888775333322110 112445678888898664332 22233356799999999
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 197 ~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++|+++|.+.+- ......-+.+++++..+. ++...|++.|+|.||..++-.|..+|+ |+++|+-++--|+
T Consensus 276 hPGFagSTG~P~---p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 276 HPGFAGSTGLPY---PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred CCCccccCCCCC---cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 999999977632 222233445566666554 467789999999999999988888987 9998876554444
No 138
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.19 E-value=1.3e-05 Score=79.64 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=75.2
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCC-CCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSIT-SDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~-~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
+.+.++|++||+.. +-+.-+...+......|| .+++|.+|+.|....- ..+........++.++++.+....+..+
T Consensus 16 ~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 56789999999954 433333455554444455 7999999988863111 0111001112577888888877767889
Q ss_pred EEEEEEchHHHHHHHHHhhcCCC-------CCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEGEK-------TPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~-------~~V~~~Vlis~p~d~ 272 (578)
|.+++||||+.+++..+...... ..+..+++++|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999876543211 257788888776655
No 139
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.16 E-value=1.9e-06 Score=84.43 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=47.4
Q ss_pred CCcEEEEECCCCCCCccHHH---HHHHHHHHhCCceEEEEeCCCC-----CCCCC---------CCC---CCCCCC----
Q 008093 159 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRGL-----GGVSI---------TSD---CFYNAG---- 214 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi---~~l~~~l~~~Gy~Vvv~D~RG~-----G~S~~---------~~~---~~~~~~---- 214 (578)
.++-||++||+ |++.+.+- ..+...|.+.++..+-+|-+-- |-... ... ..+...
T Consensus 3 ~k~riLcLHG~-~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--T-T--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCC-CcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 45779999999 55665441 2333344433899988885431 11110 000 111111
Q ss_pred chHHHHHHHHH----HHHHCCCCcEEEEEEchHHHHHHHHHhhcC------CCCCccEEEEEcCCc
Q 008093 215 WTEDAREVIGY----LHHEYPKAPLFAIGTSIGANILVKYLGEEG------EKTPVAGAAAICSPW 270 (578)
Q Consensus 215 ~~~Dl~~~i~~----l~~~~~~~~i~lvGhSmGG~ial~ya~~~p------~~~~V~~~Vlis~p~ 270 (578)
...++.+.+++ +.+.-| =..++|+|.||.++..++.... ...+++.+|++|+..
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred cccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 12334444444 444333 2579999999999998875421 123688889887643
No 140
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.14 E-value=9.9e-06 Score=88.07 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=98.4
Q ss_pred CeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 119 ~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
.-+|..+...||..+.+-.....+. ..+.++|.+|..+|.-|-+-..+++.--..|.++|+-.+..|.|
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~-----------k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDI-----------KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechh-----------hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 3456677788999998887764331 22457898888887655554444343334466799999999999
Q ss_pred CCCCCCCC---CCCCCC-CCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 199 GLGGVSIT---SDCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 199 G~G~S~~~---~~~~~~-~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
|-|.-... ..+.-. -...+|+.+.++++.... ...++.+.|.|.||.++......+|+ .+.++|+=.+..|+
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDv 586 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDV 586 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceeh
Confidence 97764321 111111 133489999999998753 35689999999999999999999998 67777665555565
Q ss_pred h
Q 008093 273 L 273 (578)
Q Consensus 273 ~ 273 (578)
.
T Consensus 587 L 587 (712)
T KOG2237|consen 587 L 587 (712)
T ss_pred h
Confidence 4
No 141
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.14 E-value=2.4e-05 Score=78.40 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=87.4
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHH--HHH-HhCCceEEEEeC-------C
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV--FNT-AKRGWNVVVSNH-------R 198 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~--~~l-~~~Gy~Vvv~D~-------R 198 (578)
+|....+..+.|+.. +.+.|+||++||-.+ +...+ .+.. ..+ .+.||-|+.+|- -
T Consensus 43 ~g~~r~y~l~vP~g~-------------~~~apLvv~LHG~~~-sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~ 107 (312)
T COG3509 43 NGLKRSYRLYVPPGL-------------PSGAPLVVVLHGSGG-SGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNAN 107 (312)
T ss_pred CCCccceEEEcCCCC-------------CCCCCEEEEEecCCC-ChHHh-hcccchhhhhcccCcEEECcCccccccCCC
Confidence 556666667777553 345699999999855 44434 3333 333 456999999842 2
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCC--CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 199 G~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|++.+....++.-..+...++.++++.+..+|+- .++++.|.|-||.++..++.++++ .+.++..++...
T Consensus 108 ~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 108 GCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred cccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 3444433333333445667889999999999964 489999999999999999999998 788877777654
No 142
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.12 E-value=5.2e-05 Score=81.14 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=67.4
Q ss_pred CCCcEEEEEC------CCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHH----HHHHHHHH
Q 008093 158 DTTPIAIVIP------GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDA----REVIGYLH 227 (578)
Q Consensus 158 ~~~PiVVllH------Gl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl----~~~i~~l~ 227 (578)
..+|.||+=+ |++|-... +-+-.+.+.|+.|+.+...- .+.+. .-.+|+ .++++.+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~p-----~P~pg----QTl~DV~~ae~~Fv~~V~ 133 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFFP-----EPEPG----QTLEDVMRAEAAFVEEVA 133 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEecC-----CCCCC----CcHHHHHHHHHHHHHHHH
Confidence 4567666643 46443332 23344456699998887641 11111 122444 45666777
Q ss_pred HHCCCC-cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 228 HEYPKA-PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 228 ~~~~~~-~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
...|.. +.+++|-+.||..++.+|+..|+ .+.-+|+-++|.+...
T Consensus 134 ~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 134 ERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred HhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCccccc
Confidence 778765 89999999999999999999999 6767777777876654
No 143
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.12 E-value=2.6e-05 Score=85.50 Aligned_cols=228 Identities=20% Similarity=0.206 Sum_probs=140.9
Q ss_pred eEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 121 ~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
+|...+..||..|....+...+. ..+.+.|+++..-|--|.+....+....-.|.++||--....-||-
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~-----------~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG 488 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDT-----------KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG 488 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEeccc-----------CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc
Confidence 44455667999988777765441 2356789999999877776665556566678899998888888986
Q ss_pred CCCCCC---CCCCCC-CCchHHHHHHHHHHHHHC--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 201 GGVSIT---SDCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 201 G~S~~~---~~~~~~-~~~~~Dl~~~i~~l~~~~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
|.-... ..+..+ ..-..|+.++.+++.+.- ....++++|-|.||+++...+.+.|+ .++++|+-.|-.|...
T Consensus 489 gelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvlt 566 (682)
T COG1770 489 GELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLT 566 (682)
T ss_pred cccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhh
Confidence 653211 111111 112379999999998753 24479999999999999999999998 7888887766555532
Q ss_pred hhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCC
Q 008093 275 GDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGN 354 (578)
Q Consensus 275 ~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 354 (578)
.. .+ +.+ .-+..||++.-... -+..-+|....|+.+.+..
T Consensus 567 TM-----------lD---------------~sl-----------PLT~~E~~EWGNP~---d~e~y~yikSYSPYdNV~a 606 (682)
T COG1770 567 TM-----------LD---------------PSL-----------PLTVTEWDEWGNPL---DPEYYDYIKSYSPYDNVEA 606 (682)
T ss_pred hh-----------cC---------------CCC-----------CCCccchhhhCCcC---CHHHHHHHhhcCchhcccc
Confidence 21 00 000 11222333321000 1123345555566655544
Q ss_pred C-ccceEEEEeCCCCCCCCCC-cchH----HHhcCCCEEEEEe-CCCCcccccc
Q 008093 355 V-SIPLLCISSLDDPVCTVEA-IPWD----ECRANKNVVLATT-WHGGHLAFFE 401 (578)
Q Consensus 355 I-~vPvLiI~g~dDpivp~~~-~~~~----~~~~~~~~~l~~~-~~GGH~~~~e 401 (578)
- --|+|++.|.+|+-|..-. ..+. ......+..+..+ -.+||-|.-.
T Consensus 607 ~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~Sg 660 (682)
T COG1770 607 QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASG 660 (682)
T ss_pred CCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCC
Confidence 3 3578999999999998642 2221 1122233344444 5789976543
No 144
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.11 E-value=3.7e-05 Score=77.15 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=69.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCC------CC-CCC---------CCCCCCc-----
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV------SI-TSD---------CFYNAGW----- 215 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S------~~-~~~---------~~~~~~~----- 215 (578)
++.-|+|||-||+ |++..-| ..++-.++.+||-|.++.+|-+.-. +. ..+ +....+.
T Consensus 115 ~~k~PvvvFSHGL-ggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGL-GGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccc-ccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 3567999999999 5577777 7889999999999999999976532 11 000 0000010
Q ss_pred --------hHHHHHHHHHHHHH-----------------------CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 216 --------TEDAREVIGYLHHE-----------------------YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 216 --------~~Dl~~~i~~l~~~-----------------------~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
..+...+++-+.+- ...+++.++|||+||..++..++.+.+ ++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeee
Confidence 12333333333221 112478999999999999988777654 88888
Q ss_pred EEc
Q 008093 265 AIC 267 (578)
Q Consensus 265 lis 267 (578)
+++
T Consensus 270 ~lD 272 (399)
T KOG3847|consen 270 ALD 272 (399)
T ss_pred eee
Confidence 764
No 145
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.08 E-value=8.6e-06 Score=87.68 Aligned_cols=168 Identities=18% Similarity=0.263 Sum_probs=107.9
Q ss_pred CCCcEEEEECCCC-CCCccHHHHHHHHHHHhCC--ceEEEEeCCC-CCCCCCCCCCCCCCCchHHHHHH----HHHHHHH
Q 008093 158 DTTPIAIVIPGLT-SDSAASYIRHLVFNTAKRG--WNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREV----IGYLHHE 229 (578)
Q Consensus 158 ~~~PiVVllHGl~-G~s~~~yi~~l~~~l~~~G--y~Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~~----i~~l~~~ 229 (578)
...|++++.||.. -...+.++..+...+...| ..+..||++. +|+-... ...+-+..+ +..+..+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~-------h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIK-------HAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchH-------HHHHHHHHHhhhhhhhhhcc
Confidence 3568999999975 2233333345555555555 4567778775 4441111 011222222 2334456
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~ 309 (578)
|+..+|+++|.|||+.+++.....+.+. -|+++|+|+-|++.....
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgp--------------------------------- 292 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGP--------------------------------- 292 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCcc---------------------------------
Confidence 7899999999999998888776665542 388999887665442110
Q ss_pred cCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 310 ~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
.|. ..+.+-.++.|+||+.|.+|..|+...++....+.-...+++
T Consensus 293 ------------------------rgi-----------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elh 337 (784)
T KOG3253|consen 293 ------------------------RGI-----------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELH 337 (784)
T ss_pred ------------------------cCC-----------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEE
Confidence 011 113345678999999999999999987765444445567899
Q ss_pred EeCCCCcccccc
Q 008093 390 TTWHGGHLAFFE 401 (578)
Q Consensus 390 ~~~~GGH~~~~e 401 (578)
++.+++|..-..
T Consensus 338 VI~~adhsmaip 349 (784)
T KOG3253|consen 338 VIGGADHSMAIP 349 (784)
T ss_pred EecCCCccccCC
Confidence 999999976554
No 146
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.02 E-value=0.00017 Score=88.94 Aligned_cols=98 Identities=16% Similarity=0.159 Sum_probs=67.8
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHH-HHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE-VIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i~lv 238 (578)
.|.++++||++|+ ...| ..++..+. .+++|++++.+|+|.... ..+ ..+++.+ +++.+....+..+++++
T Consensus 1068 ~~~l~~lh~~~g~-~~~~-~~l~~~l~-~~~~v~~~~~~g~~~~~~---~~~---~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGF-AWQF-SVLSRYLD-PQWSIYGIQSPRPDGPMQ---TAT---SLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCc-hHHH-HHHHHhcC-CCCcEEEEECCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 4568999999664 4455 67777764 479999999999986521 111 1232322 23334444456689999
Q ss_pred EEchHHHHHHHHHhhc---CCCCCccEEEEEcC
Q 008093 239 GTSIGANILVKYLGEE---GEKTPVAGAAAICS 268 (578)
Q Consensus 239 GhSmGG~ial~ya~~~---p~~~~V~~~Vlis~ 268 (578)
||||||.++..++.+. +. .+..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecC
Confidence 9999999999998863 44 7888888765
No 147
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.99 E-value=0.00021 Score=68.84 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=47.4
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 352 VGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 352 l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
...|++|.|-|.|+.|.++|...... +...-++. .++.-.|||+. |...-+.+.+.+|+..+...
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~-L~~~~~~a-~vl~HpggH~V------P~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQ-LAESFKDA-TVLEHPGGHIV------PNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHH-HHHhcCCC-eEEecCCCccC------CCchHHHHHHHHHHHHHHHh
Confidence 45689999999999999999875543 34445555 44555689976 44445788999999887543
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.96 E-value=3.9e-05 Score=74.99 Aligned_cols=109 Identities=18% Similarity=0.304 Sum_probs=76.9
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCC-----ceEEEEeCCCC----CCCCCC--CC---------CCCCCCchHHH
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRG-----WNVVVSNHRGL----GGVSIT--SD---------CFYNAGWTEDA 219 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~G-----y~Vvv~D~RG~----G~S~~~--~~---------~~~~~~~~~Dl 219 (578)
-| .|++||.+|...+ +..++..+...+ --++.+|--|- |.-+.. .| +.....+..-+
T Consensus 46 iP-TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 46 IP-TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred cc-eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 35 5699999765544 477888887654 23555666652 111100 01 11112345678
Q ss_pred HHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCCcc
Q 008093 220 REVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWD 271 (578)
Q Consensus 220 ~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p~d 271 (578)
..++.+++++|.-.++-+|||||||.-+..|+..++.+ +++...|.++.|++
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 88999999999999999999999999999999988754 36999999999987
No 149
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.91 E-value=3.9e-05 Score=76.65 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=69.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC----ceEEEEeCCCCCCC--CCCC-----CCCCCCCc----hHHH-H
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGV--SITS-----DCFYNAGW----TEDA-R 220 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G----y~Vvv~D~RG~G~S--~~~~-----~~~~~~~~----~~Dl-~ 220 (578)
...-|+|+++||..+.....-+......+...| .-+|+++.-+.+.. .... ......+. .+.+ .
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 356799999999721111111223333334433 45666776555411 1000 01111111 1223 3
Q ss_pred HHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 221 EVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 221 ~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
+++.++.++++.. +..++|+||||..++.++.++|+ .+.+++++|+.++..
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESETT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcccccc
Confidence 6778888888522 27999999999999999999999 899999999766553
No 150
>PRK04940 hypothetical protein; Provisional
Probab=97.89 E-value=0.00039 Score=65.74 Aligned_cols=35 Identities=9% Similarity=-0.118 Sum_probs=29.4
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
.++.+||.||||+-|..++.+++- .+|+|+|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCCh
Confidence 479999999999999999988865 57889887654
No 151
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.88 E-value=7.2e-05 Score=75.01 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=76.4
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHH-HHHHHHHHHHHCCCCcEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTED-AREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~D-l~~~i~~l~~~~~~~~i~lvG 239 (578)
|+++++||..| +...| ..++..+... ..|+.++.||.|.-... ....+| +...++.|++..|..|++++|
T Consensus 1 ~pLF~fhp~~G-~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGG-SVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP------FASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCC-cHHHH-HHHHHHhccC-ceeeccccCcccccccc------cCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 45899999855 55556 7788887765 89999999999852211 122344 456788888888999999999
Q ss_pred EchHHHHHHHHHhhcCCC-CCccEEEEEcCCcc
Q 008093 240 TSIGANILVKYLGEEGEK-TPVAGAAAICSPWD 271 (578)
Q Consensus 240 hSmGG~ial~ya~~~p~~-~~V~~~Vlis~p~d 271 (578)
+|+||+++...|.+.... ..|..+++++++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999888653221 16889999988766
No 152
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.88 E-value=0.00019 Score=68.78 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=81.0
Q ss_pred CCcEEEEECCCCCCC-ccHHHHHHHHHHHhCCceEEEEeCCC----CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 159 TTPIAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSNHRG----LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 159 ~~PiVVllHGl~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG----~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
.+-.|||+-|++.+- ...|...++..+.+.+|..+-+-.|. +|.+... ...+|+..+++|+...--.+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk-------~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK-------DDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc-------ccHHHHHHHHHHhhccCccc
Confidence 345689999995443 34788899999999999999998764 4444332 45689999999987654456
Q ss_pred cEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.++++|||-|..=.+.|+...-....|.++|+.+|..|.+
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 8999999999999999994433323688888888776654
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.84 E-value=0.00069 Score=70.28 Aligned_cols=111 Identities=14% Similarity=0.219 Sum_probs=73.4
Q ss_pred CCCcEEEEECCCCCCCc-cHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCC-----------CCCCC-----------
Q 008093 158 DTTPIAIVIPGLTSDSA-ASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITS-----------DCFYN----------- 212 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~-~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~-----------~~~~~----------- 212 (578)
.....||++||.+.+.. ...+..+-..|.+.||.++.+..+. ....+... .....
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 55678999999954433 2456778888999999999999887 11111100 00000
Q ss_pred ---------CCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 213 ---------AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 213 ---------~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.....-+.+++.++.. ++..+++++||+.|+..+++|+.+.+.. .++++|+|++.+
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~ 229 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYW 229 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCC
Confidence 0011233444444443 4555699999999999999999998762 488999997654
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.82 E-value=4.5e-05 Score=75.02 Aligned_cols=40 Identities=23% Similarity=0.162 Sum_probs=26.3
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCC----------CCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEK----------TPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~----------~~V~~~Vlis~p~d~ 272 (578)
.+|.+|||||||.++-.++....+. ......+.+++|.-.
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G 127 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLG 127 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCC
Confidence 5899999999999986555432211 034456677887643
No 155
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.81 E-value=9.1e-05 Score=75.97 Aligned_cols=117 Identities=19% Similarity=0.218 Sum_probs=87.7
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhC---C------ceEEEEeCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR---G------WNVVVSNHRG 199 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~---G------y~Vvv~D~RG 199 (578)
.|-.|+.--..+++.+ ......| ++++|||.|+-.+-| .++..|.+. | |.|+++.++|
T Consensus 132 eGL~iHFlhvk~p~~k----------~~k~v~P-lLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK----------KKKKVKP-LLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred cceeEEEEEecCCccc----------cCCcccc-eEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCC
Confidence 5666766555554321 1123445 789999999877766 577777653 3 8999999999
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEE
Q 008093 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263 (578)
Q Consensus 200 ~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~ 263 (578)
+|-|+.++..-++. ..++.++.-+.-+.+-.+.++-|-.+|+.|+..++.-+|+ +|.|.
T Consensus 199 ygwSd~~sk~GFn~---~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~Gl 257 (469)
T KOG2565|consen 199 YGWSDAPSKTGFNA---AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLGL 257 (469)
T ss_pred cccCcCCccCCccH---HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhHh
Confidence 99999887765553 4566777777778888899999999999999999999999 56553
No 156
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.76 E-value=0.00013 Score=80.66 Aligned_cols=127 Identities=17% Similarity=0.124 Sum_probs=78.0
Q ss_pred CcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCC---CCCccHHHHHHHHHHHh-C-CceEEEEeCC-C-CCC
Q 008093 130 GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAK-R-GWNVVVSNHR-G-LGG 202 (578)
Q Consensus 130 G~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~-~-Gy~Vvv~D~R-G-~G~ 202 (578)
...+.++.+.|... ......|+||++||-+ |+... + ....+.. . |+.|+.+||| | .|.
T Consensus 76 Edcl~l~i~~p~~~-----------~~~~~~pv~v~ihGG~~~~g~~~~-~---~~~~~~~~~~~~~vv~~~yRlg~~g~ 140 (493)
T cd00312 76 EDCLYLNVYTPKNT-----------KPGNSLPVMVWIHGGGFMFGSGSL-Y---PGDGLAREGDNVIVVSINYRLGVLGF 140 (493)
T ss_pred CcCCeEEEEeCCCC-----------CCCCCCCEEEEEcCCccccCCCCC-C---ChHHHHhcCCCEEEEEeccccccccc
Confidence 34567777766431 1135679999999931 22222 1 1223333 3 3999999999 5 232
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHH---C--CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 203 VSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 203 S~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
-...........-..|..++++++++. + ...+|.++|+|.||.++..++........++++|+.+++..
T Consensus 141 ~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 141 LSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred ccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 211111111111247999999999875 2 34589999999999999887766433236888888887543
No 157
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.72 E-value=0.0019 Score=61.60 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=58.4
Q ss_pred CccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh
Q 008093 173 SAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 173 s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~ 252 (578)
+...| ..+...+.. ++.|++++.+|++.+..... .....+...++.+....+..+++++||||||.++...+.
T Consensus 11 ~~~~~-~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 11 GPHEY-ARLAAALRG-RRDVSALPLPGFGPGEPLPA-----SADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred cHHHH-HHHHHhcCC-CccEEEecCCCCCCCCCCCC-----CHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 33345 567777654 68999999999986543211 112223334455555566778999999999999988877
Q ss_pred hcCC-CCCccEEEEEcC
Q 008093 253 EEGE-KTPVAGAAAICS 268 (578)
Q Consensus 253 ~~p~-~~~V~~~Vlis~ 268 (578)
.... ...+.+++++.+
T Consensus 84 ~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 84 RLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHhCCCCCcEEEEEcc
Confidence 5322 115778877764
No 158
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.00054 Score=67.33 Aligned_cols=248 Identities=16% Similarity=0.186 Sum_probs=123.9
Q ss_pred CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeCCCCCCCCCC
Q 008093 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSIT 206 (578)
Q Consensus 129 DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 206 (578)
.-++....|+.|+. ..|+-+.+-|- |+.. |.+ -+...+.++|...+++..+=+|.....
T Consensus 98 ~~~~A~~~~liPQK----------------~~~KOG~~a~t-gdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~ 158 (371)
T KOG1551|consen 98 ESRTARVAWLIPQK----------------MADLCLSWALT-GDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPE 158 (371)
T ss_pred cccceeeeeecccC----------------cCCeeEEEeec-CCce--eEeeeeecCchhhhcchheeeecccccccCCH
Confidence 34667788988743 34555555554 4332 222 356677888999999999989876432
Q ss_pred CCCCCCCCchHHH----HHHHHHHHHHC------CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc-chhhh
Q 008093 207 SDCFYNAGWTEDA----REVIGYLHHEY------PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIG 275 (578)
Q Consensus 207 ~~~~~~~~~~~Dl----~~~i~~l~~~~------~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~-d~~~~ 275 (578)
......-....|+ ++.|+...+.+ +-.++.++|-||||.++-.....++. +|+-+=++++.- ....+
T Consensus 159 ~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~--Pva~~p~l~~~~asvs~t 236 (371)
T KOG1551|consen 159 EQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQK--PVATAPCLNSSKASVSAT 236 (371)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCC--Cccccccccccccchhhh
Confidence 1100000111233 12222222222 34689999999999999877766665 444333232211 01111
Q ss_pred hHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccccCCHHHHh---ccCCHHHHHhhhhhccCCCCCHHHHHHhC-Ccccc
Q 008093 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIK---KSRSIRDFDSHATCLVGKFETVDTYYRNC-SSSTY 351 (578)
Q Consensus 276 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~~~d~~~i~---~~~s~~efd~~~~~~~~g~~~~~~yy~~~-s~~~~ 351 (578)
+..+. ..+.+ +++.... ..+.... .+++.....+. ++ ..+-+....+.+.. +....
T Consensus 237 eg~l~-----~~~s~-----~~~~~~~--------t~~~~~~~r~p~Q~~~~~~~~-~s-rn~~~E~~~~Mr~vmd~~T~ 296 (371)
T KOG1551|consen 237 EGLLL-----QDTSK-----MKRFNQT--------TNKSGYTSRNPAQSYHLLSKE-QS-RNSRKESLIFMRGVMDECTH 296 (371)
T ss_pred hhhhh-----hhhHH-----HHhhccC--------cchhhhhhhCchhhHHHHHHH-hh-hcchHHHHHHHHHHHHhhch
Confidence 11110 01111 1111000 0000000 00000000000 00 01111111111111 11123
Q ss_pred cCCCccc-----eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhc
Q 008093 352 VGNVSIP-----LLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLH 422 (578)
Q Consensus 352 l~~I~vP-----vLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~ 422 (578)
+.+..+| +.++.+++|..+|....+. ..+.-|++++...+ |||+.-+- -..+.|.++|.|-|+++.
T Consensus 297 v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~-lQ~~WPg~eVr~~e-gGHVsayl---~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 297 VANFPVPVDPSLIIVVQAKEDAYIPRTGVRS-LQEIWPGCEVRYLE-GGHVSAYL---FKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred hhcCCCCCCCCeEEEEEecCCccccccCcHH-HHHhCCCCEEEEee-cCceeeee---hhchHHHHHHHHHHHhhh
Confidence 3444444 6788999999999977665 55677889888888 89987554 133468899999988764
No 159
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.61 E-value=0.0011 Score=63.42 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=40.6
Q ss_pred ccceEEEEeCCCCCCCCCCcc---hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 356 SIPLLCISSLDDPVCTVEAIP---WDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~---~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
.+|++..||++|++||..-.. .........+++..+++-+|.-.-+ -.+.+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~--------e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQ--------ELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHH--------HHHHHHHHHHH
Confidence 689999999999999987322 1233334448999999999966554 23566777765
No 160
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.58 E-value=0.00024 Score=67.60 Aligned_cols=129 Identities=20% Similarity=0.366 Sum_probs=73.0
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHH--HHHHHHHhCCceEEEEeC--CCC---CCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNH--RGL---GGV 203 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~--~l~~~l~~~Gy~Vvv~D~--RG~---G~S 203 (578)
..+....+.|++. +....-|++.++-|++. ..+.++. .+...+.++|+.||.+|- ||. |..
T Consensus 26 c~Mtf~vylPp~a-----------~~~k~~P~lf~LSGLTC-T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~ 93 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-----------PRGKRCPVLFYLSGLTC-THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDD 93 (283)
T ss_pred cceEEEEecCCCc-----------ccCCcCceEEEecCCcc-cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCc
Confidence 4456666766553 22345799999999975 4555543 234456678999999984 664 222
Q ss_pred CCC----CCCCCC----CCchHHHHHHHHHHHHHC-----------CCCcEEEEEEchHHHHHHHHHhhcCCCC-CccEE
Q 008093 204 SIT----SDCFYN----AGWTEDAREVIGYLHHEY-----------PKAPLFAIGTSIGANILVKYLGEEGEKT-PVAGA 263 (578)
Q Consensus 204 ~~~----~~~~~~----~~~~~Dl~~~i~~l~~~~-----------~~~~i~lvGhSmGG~ial~ya~~~p~~~-~V~~~ 263 (578)
+.- ...+|. .-|.. --.+.+|+.++. ...++.+.||||||.=++..+.+.+..- .|.+.
T Consensus 94 eswDFG~GAGFYvnAt~epw~~-~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAF 172 (283)
T KOG3101|consen 94 ESWDFGQGAGFYVNATQEPWAK-HYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAF 172 (283)
T ss_pred ccccccCCceeEEecccchHhh-hhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecc
Confidence 100 001111 01111 011223333222 2346999999999988876666655521 36677
Q ss_pred EEEcCCcch
Q 008093 264 AAICSPWDL 272 (578)
Q Consensus 264 Vlis~p~d~ 272 (578)
+-||.|.+.
T Consensus 173 API~NP~~c 181 (283)
T KOG3101|consen 173 APICNPINC 181 (283)
T ss_pred ccccCcccC
Confidence 777777644
No 161
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.54 E-value=0.00029 Score=76.60 Aligned_cols=157 Identities=18% Similarity=0.067 Sum_probs=97.2
Q ss_pred CCchhHHHhhhhhhcC-CCCCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc-H
Q 008093 99 LSSPHIQTAFLHFFGR-PPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA-S 176 (578)
Q Consensus 99 l~~ghlQT~~~~~~~~-~~~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~-~ 176 (578)
+...-++++-....+. ...+.-+...-+..||..|.+=... .+. ..+ +.|++|.--|-.+-+.. .
T Consensus 372 ~~~~eLe~ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-----------~~d-~~pTll~aYGGF~vsltP~ 438 (648)
T COG1505 372 LFGGELEVIREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-----------KKD-ENPTLLYAYGGFNISLTPR 438 (648)
T ss_pred cCCceehhhhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCC-----------cCC-CCceEEEeccccccccCCc
Confidence 3444466653222211 1223334445566799999876654 221 113 67876555543233333 3
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCC-------CchHHHHHHHHHHHHHCC--CCcEEEEEEchHHHHH
Q 008093 177 YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNA-------GWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANIL 247 (578)
Q Consensus 177 yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~-------~~~~Dl~~~i~~l~~~~~--~~~i~lvGhSmGG~ia 247 (578)
| ........++|..-+..|.||-|.-.. ....+ .-.+|..++.+.+.++.- .+++.+.|-|-||.++
T Consensus 439 f-s~~~~~WLerGg~~v~ANIRGGGEfGp---~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLv 514 (648)
T COG1505 439 F-SGSRKLWLERGGVFVLANIRGGGEFGP---EWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLV 514 (648)
T ss_pred c-chhhHHHHhcCCeEEEEecccCCccCH---HHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEE
Confidence 4 334477788999999999999876421 11111 123899999999987742 3479999999999999
Q ss_pred HHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 248 VKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 248 l~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
...+.+.|+ .+.++|+-.|-.|+..
T Consensus 515 g~alTQrPe--lfgA~v~evPllDMlR 539 (648)
T COG1505 515 GAALTQRPE--LFGAAVCEVPLLDMLR 539 (648)
T ss_pred EeeeccChh--hhCceeeccchhhhhh
Confidence 988889998 5656555445556543
No 162
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.52 E-value=0.0017 Score=71.09 Aligned_cols=112 Identities=15% Similarity=0.103 Sum_probs=71.9
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHH-----------HHH------hCCceEEEEeC-CCCCCCCCCCCCCCC--CCch
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVF-----------NTA------KRGWNVVVSNH-RGLGGVSITSDCFYN--AGWT 216 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~-----------~l~------~~Gy~Vvv~D~-RG~G~S~~~~~~~~~--~~~~ 216 (578)
..+.|+||+++|-.|+|... -.+.+ .+. .+-.+++.+|. +|+|.|......... ....
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~--G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a 151 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMF--ALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVS 151 (462)
T ss_pred CCCCCEEEEECCCCcHHHHH--hhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHH
Confidence 35679999999998877531 11110 010 11257888896 699988654332111 2345
Q ss_pred HHHHHHHHHHHHHCCC---CcEEEEEEchHHHHHHHHHhhcC--------CCCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPK---APLFAIGTSIGANILVKYLGEEG--------EKTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~---~~i~lvGhSmGG~ial~ya~~~p--------~~~~V~~~Vlis~p~ 270 (578)
+|+.++++...+++|. .+++++|+|+||..+..+|.+-- ....++|+++-++-.
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 7888888877777764 79999999999998877765421 123577877655433
No 163
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.49 E-value=0.00057 Score=70.51 Aligned_cols=114 Identities=12% Similarity=0.155 Sum_probs=75.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCC-CCCCCCCCchHHHHHHHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSIT-SDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~~-~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 234 (578)
..+-++||+||+.. +-+.-...+++-..+.|+ .+++|-++..|..-.- .++..+.....+++.++.+|..+.+..+
T Consensus 114 ~~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 56678999999954 433223456666666664 6888999987763211 1111111223689999999999888889
Q ss_pred EEEEEEchHHHHHHHHHhhcC---C---CCCccEEEEEcCCcch
Q 008093 235 LFAIGTSIGANILVKYLGEEG---E---KTPVAGAAAICSPWDL 272 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p---~---~~~V~~~Vlis~p~d~ 272 (578)
|++++||||..+++..+.+.. . ...++-+|+-++-.|.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 999999999999998775431 1 1245566666555544
No 164
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.45 E-value=0.0027 Score=68.46 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=67.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc----eEEEEeCCCCCCCCCCCCCCC-CCCchHHH-HHHHHHHHHHCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW----NVVVSNHRGLGGVSITSDCFY-NAGWTEDA-REVIGYLHHEYP 231 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy----~Vvv~D~RG~G~S~~~~~~~~-~~~~~~Dl-~~~i~~l~~~~~ 231 (578)
...|+|+++||-.- ....-+...+..+.+.|. .+|.+|..+.. . ...... ...+.+.+ .+++-++.++|+
T Consensus 207 ~~~PvlyllDG~~w-~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~-R~~el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 207 EERPLAILLDGQFW-AESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--H-RSQELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCCEEEEEECHHh-hhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--c-ccccCCchHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999531 111113445566666663 35666652211 1 101111 11222333 466677777764
Q ss_pred ----CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 232 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 232 ----~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
..+.+++|+||||..++..+..+|+ .+.+++++++.+
T Consensus 283 ~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 283 FSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred CCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 3468999999999999999999999 899999998653
No 165
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.43 E-value=0.0024 Score=62.59 Aligned_cols=110 Identities=16% Similarity=0.205 Sum_probs=80.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-C--ceEEEEeCCCCCCCCCCCCCCCC------CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-G--WNVVVSNHRGLGGVSITSDCFYN------AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-G--y~Vvv~D~RG~G~S~~~~~~~~~------~~~~~Dl~~~i~~l~~ 228 (578)
.+++++++++|..|... .| ..++..+... + ..++.+-+-||..-+.+.....+ .+..+.+..-++++++
T Consensus 27 ~~~~li~~IpGNPG~~g-FY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCchh-HH-HHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 57899999999987544 35 7788777653 2 56999999998876522111111 2334677788888887
Q ss_pred HCC-CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 229 EYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 229 ~~~-~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
-.| +.+++++|||.|+++.++.+-......+|..++++-|.
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 766 56899999999999999999866555578888888664
No 166
>PLN02606 palmitoyl-protein thioesterase
Probab=97.42 E-value=0.0087 Score=61.04 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=64.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~ 236 (578)
..| ||+.||++.+....-+..+.+.+.+ .|+-+..+- .|-+. ...+.....+.+..+.+.++..- -..-+.
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~~G~n 98 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELSEGYN 98 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhcCceE
Confidence 345 7799999522222235777777753 365444443 22111 11121222355566666555411 012499
Q ss_pred EEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 237 lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
++|+|.||.++-.++.+.+...+|+-+|.+++|..
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999988866457999999998753
No 167
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.38 E-value=0.0013 Score=71.64 Aligned_cols=112 Identities=22% Similarity=0.257 Sum_probs=70.8
Q ss_pred CCCcEEEEECCCCCCCccHHH-HHHHHHH-HhCCceEEEEeCCCCCCCCCCCCCCC------C-CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYI-RHLVFNT-AKRGWNVVVSNHRGLGGVSITSDCFY------N-AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi-~~l~~~l-~~~Gy~Vvv~D~RG~G~S~~~~~~~~------~-~~~~~Dl~~~i~~l~~ 228 (578)
++.|++|++-|= |.....++ ..+...+ .+.|=-++++.||-+|.|.+...... + .....|+..++++++.
T Consensus 27 ~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 27 PGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 347877777664 33332232 2233333 34577899999999999975432111 1 1224799999999997
Q ss_pred HC---CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 229 EY---PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 229 ~~---~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
++ ++.|++++|-|+||+++.-+-.++|+ .+.|+++-++|...
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a 150 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQA 150 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCH
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeee
Confidence 76 45699999999999999999999999 89999999988643
No 168
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.37 E-value=0.00057 Score=71.79 Aligned_cols=104 Identities=21% Similarity=0.227 Sum_probs=73.7
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
.++++||+ +.....+ ..+...+...||. ++.+++.+-.. .. + .....+.+...++.+....+..++.++
T Consensus 61 pivlVhG~-~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~--~---~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 61 PIVLVHGL-GGGYGNF-LPLDYRLAILGWLTNGVYAFELSGGDG-TY--S---LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred eEEEEccC-cCCcchh-hhhhhhhcchHHHhcccccccccccCC-Cc--c---ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 48899998 4444444 5666677777887 88888876511 11 1 112234555666666666667899999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
||||||.++..|++..+....|+.++.+++|-...
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999998888888544899999999886543
No 169
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.23 E-value=0.00081 Score=67.84 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=47.9
Q ss_pred cccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCC-CEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 348 SSTYVGNVS-IPLLCISSLDDPVCTVEAIPWDECRANK-NVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 348 ~~~~l~~I~-vPvLiI~g~dDpivp~~~~~~~~~~~~~-~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
....+.++. +|+|+++|.+|.++|............. +.....+++++|...... .+......+.+.+|+.+.
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERH 297 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHh
Confidence 344555565 8999999999999998754433222233 677888888999876531 011113567788888764
No 170
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.13 E-value=0.0011 Score=73.59 Aligned_cols=125 Identities=18% Similarity=0.111 Sum_probs=73.6
Q ss_pred cEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCC--C-CCC-ccHHHHHHHHHHHhCCceEEEEeCCC--CCCCC
Q 008093 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGL--T-SDS-AASYIRHLVFNTAKRGWNVVVSNHRG--LGGVS 204 (578)
Q Consensus 131 ~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl--~-G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG--~G~S~ 204 (578)
.-+.|+.+.|.... .....|++|++||- . |+. ...| .-...+.+++.-||.+|||= +|--.
T Consensus 107 DCL~LnI~~P~~~~-----------~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~ 173 (535)
T PF00135_consen 107 DCLYLNIYTPSNAS-----------SNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLS 173 (535)
T ss_dssp ---EEEEEEETSSS-----------STTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-B
T ss_pred hHHHHhhhhccccc-----------cccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEeccccccccccc
Confidence 46788888775421 12257999999992 2 222 1333 33445677899999999994 33221
Q ss_pred CCCCCCC-CCCchHHHHHHHHHHHHH---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 205 ITSDCFY-NAGWTEDAREVIGYLHHE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 205 ~~~~~~~-~~~~~~Dl~~~i~~l~~~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
....... ..--..|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..+.++|+.++
T Consensus 174 ~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 174 LGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp SSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred ccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 1111111 111236999999999875 33 3579999999999998877665433447999999997
No 171
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.08 E-value=0.0023 Score=68.69 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=73.8
Q ss_pred CCCcEEEEECC--CCCCCccHHHHHHHHHHHhCC-ceEEEEeCCC--CCCCC---CCCCCCCC-CCchHHHHHHHHHHHH
Q 008093 158 DTTPIAIVIPG--LTSDSAASYIRHLVFNTAKRG-WNVVVSNHRG--LGGVS---ITSDCFYN-AGWTEDAREVIGYLHH 228 (578)
Q Consensus 158 ~~~PiVVllHG--l~G~s~~~yi~~l~~~l~~~G-y~Vvv~D~RG--~G~S~---~~~~~~~~-~~~~~Dl~~~i~~l~~ 228 (578)
...|++|++|| +.+++.+.. ..-...|+++| +-||.+|||= +|--. ....+.+. .--..|...+++|+++
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 45799999998 222333321 11345677777 9999999994 34322 22112211 1224799999999987
Q ss_pred H---CC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 229 E---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 229 ~---~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
. ++ ...|.++|+|.||+.++.+++--.-+..+..+|+.|++..
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 4 33 4579999999999999988776433335777888877654
No 172
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.98 E-value=0.002 Score=69.14 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhCCceE------EEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 177 YIRHLVFNTAKRGWNV------VVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 177 yi~~l~~~l~~~Gy~V------vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
|+..+++.|.+.||.. .-+|+|---. ........+...|+.+.+.. +.|+++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~--------~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA--------ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh--------hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 4588999999988743 2257762211 11244577888888888776 7899999999999999999
Q ss_pred HhhcCCC----CCccEEEEEcCCcchh
Q 008093 251 LGEEGEK----TPVAGAAAICSPWDLL 273 (578)
Q Consensus 251 a~~~p~~----~~V~~~Vlis~p~d~~ 273 (578)
+...+.. ..|++.|.+++|+...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9887542 2699999999998643
No 173
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.0063 Score=58.20 Aligned_cols=115 Identities=16% Similarity=0.156 Sum_probs=73.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHH--------------HHHHHHhCCceEEEEeCCCCCCC--CCCCCCCCCCCchHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRH--------------LVFNTAKRGWNVVVSNHRGLGGV--SITSDCFYNAGWTEDARE 221 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~--------------l~~~l~~~Gy~Vvv~D~RG~G~S--~~~~~~~~~~~~~~Dl~~ 221 (578)
.....+|++||-+--....|.+. +++.+.+.||.|++.|.--+-.- ....+..|...-.+-+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 34568999999743233344443 35677788999999986422110 112233333333344444
Q ss_pred HHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 222 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 222 ~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+..++........+++|.||.||...+.++.+.++...|.++++-++++..
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 444444333345799999999999999999999887788888887777433
No 174
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.93 E-value=0.016 Score=56.46 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=48.3
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCce-EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
+-+||++-|+ |...+.+ .++. ...+|. ++++|||..--. .| + .. ...+.+|
T Consensus 11 ~~LilfF~GW-g~d~~~f-~hL~---~~~~~D~l~~yDYr~l~~d-------------~~-------~-~~--y~~i~lv 62 (213)
T PF04301_consen 11 KELILFFAGW-GMDPSPF-SHLI---LPENYDVLICYDYRDLDFD-------------FD-------L-SG--YREIYLV 62 (213)
T ss_pred CeEEEEEecC-CCChHHh-hhcc---CCCCccEEEEecCcccccc-------------cc-------c-cc--CceEEEE
Confidence 4689999999 4333322 3221 234554 566788743210 01 1 12 3479999
Q ss_pred EEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 239 GTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 239 GhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
|+|||-.+|.+++... +++..++|++
T Consensus 63 AWSmGVw~A~~~l~~~----~~~~aiAING 88 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI----PFKRAIAING 88 (213)
T ss_pred EEeHHHHHHHHHhccC----CcceeEEEEC
Confidence 9999999998887653 4677778875
No 175
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.87 E-value=0.0073 Score=63.56 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=67.9
Q ss_pred CCcEEEEECCCCC---CCcc--HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCC
Q 008093 159 TTPIAIVIPGLTS---DSAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 159 ~~PiVVllHGl~G---~s~~--~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
+.|+||++||.+= .... .++..+...+. ...++++||.-...-+. ...|. ....++.+..+++.+..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~--~~~yP-tQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEH--GHKYP-TQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccC--CCcCc-hHHHHHHHHHHHHHhccCCC
Confidence 4599999999421 1111 12223333333 45899999975431000 11111 34578888888998667788
Q ss_pred cEEEEEEchHHHHHHHHHhhcCC---CCCccEEEEEcCCcch
Q 008093 234 PLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDL 272 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~~~p~---~~~V~~~Vlis~p~d~ 272 (578)
.|+++|-|.||++++.++..... ...-+++|+|+|-.++
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999999999977654222 1234688999765444
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.79 E-value=0.0037 Score=69.95 Aligned_cols=102 Identities=18% Similarity=0.265 Sum_probs=61.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHh----------------CCceEEEEeCCC-----CCCCCCCCCCCCCCCchH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK----------------RGWNVVVSNHRG-----LGGVSITSDCFYNAGWTE 217 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~----------------~Gy~Vvv~D~RG-----~G~S~~~~~~~~~~~~~~ 217 (578)
++-+|+|+||..|+-.. +|.++..... ..|+.+++|.-+ ||++- ...++
T Consensus 88 sGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtE 157 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTE 157 (973)
T ss_pred CCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHH
Confidence 34458999999886554 5666665542 235556666533 22210 12346
Q ss_pred HHHHHHHHHHHHCCC---------CcEEEEEEchHHHHHHHHHhhcCC-CCCccEEEEEcCCc
Q 008093 218 DAREVIGYLHHEYPK---------APLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPW 270 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~---------~~i~lvGhSmGG~ial~ya~~~p~-~~~V~~~Vlis~p~ 270 (578)
-+.++|.+|...|.. ..+++|||||||.+|...+..... +..|.-++..++|.
T Consensus 158 YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 158 YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 677777777766532 239999999999999766543211 11466666666654
No 177
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.57 E-value=0.02 Score=60.63 Aligned_cols=105 Identities=19% Similarity=0.222 Sum_probs=70.4
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCC-------------------CC----C-C
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSD-------------------CF----Y-N 212 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~-------------------~~----~-~ 212 (578)
+.+.+|++++|++|+....|...+.+.++++ +..|+-+||-|.|.-+...+ .. . +
T Consensus 33 e~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~~~i~~ 112 (403)
T PF11144_consen 33 EIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDSESINT 112 (403)
T ss_pred CceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCcccccccc
Confidence 5677899999998888888877777777653 33445557777653222110 00 0 0
Q ss_pred ---------------------------------------------CCc--hHHHHHHHHHHHHHCC----CCcEEEEEEc
Q 008093 213 ---------------------------------------------AGW--TEDAREVIGYLHHEYP----KAPLFAIGTS 241 (578)
Q Consensus 213 ---------------------------------------------~~~--~~Dl~~~i~~l~~~~~----~~~i~lvGhS 241 (578)
.|. +-|...++.++.+.++ ..|++++|+|
T Consensus 113 ~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s 192 (403)
T PF11144_consen 113 YDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSS 192 (403)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecC
Confidence 000 2377777777777764 2489999999
Q ss_pred hHHHHHHHHHhhcCCCCCccEEE
Q 008093 242 IGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 242 mGG~ial~ya~~~p~~~~V~~~V 264 (578)
.||.++...+.-.|- .+++++
T Consensus 193 ~G~yla~l~~k~aP~--~~~~~i 213 (403)
T PF11144_consen 193 HGGYLAHLCAKIAPW--LFDGVI 213 (403)
T ss_pred cHHHHHHHHHhhCcc--ceeEEE
Confidence 999999988888887 566655
No 178
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.56 E-value=0.025 Score=57.76 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=66.9
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--CCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~ 234 (578)
...| +|+.||++.+....-+..+.+.+.+ .|..+.++-. |.+ . ...+.....+.+..+.+.++.. .. .-
T Consensus 24 ~~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~--~-~~s~~~~~~~Qve~vce~l~~~~~l~-~G 95 (314)
T PLN02633 24 VSVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG--V-GDSWLMPLTQQAEIACEKVKQMKELS-QG 95 (314)
T ss_pred CCCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC--c-cccceeCHHHHHHHHHHHHhhchhhh-Cc
Confidence 3455 7799999544333355666666644 2555555433 333 1 1222223335555555555541 12 24
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
+.++|+|.||.++-.++.+.+...+|+-+|.+++|-.
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999988876457999999998753
No 179
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.48 E-value=0.0075 Score=55.60 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCC--CCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~--~~V~~~Vlis~p~ 270 (578)
.++...++....++|..+++++||||||.++..++...... ..+..++..++|-
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45566666666668999999999999999999887766442 2456677777664
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.22 E-value=0.075 Score=56.15 Aligned_cols=153 Identities=12% Similarity=0.108 Sum_probs=95.2
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc-chhhhhHHHhhHHHHHHHHHHHHHhHHHHHhhhcccccc
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~-d~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~l~~ 309 (578)
.-.++++.|.|==|..++..|+.. + +|+|++-+.-.. ++... +... .+.|.......+..|....
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D-~--RV~aivP~Vid~LN~~~~---l~h~--y~~yG~~ws~a~~dY~~~g------ 235 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVD-P--RVKAIVPIVIDVLNMKAN---LEHQ--YRSYGGNWSFAFQDYYNEG------ 235 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccC-c--ceeEEeeEEEccCCcHHH---HHHH--HHHhCCCCccchhhhhHhC------
Confidence 456899999999999999888844 3 799988776432 33211 1110 0001100001111111100
Q ss_pred cCCHHHHhccCCHHHHHhhhhhccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008093 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLA 389 (578)
Q Consensus 310 ~~d~~~i~~~~s~~efd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~ 389 (578)
+ +.. .+-+......+..++..+.+++++|-++|+|..|++..++.......+......+.
T Consensus 236 ------i-------------~~~-l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 236 ------I-------------TQQ-LDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred ------c-------------hhh-cCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 0 000 01112233344556677778899999999999999999887766666677788999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 390 TTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 390 ~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
.+|+.+|-+-.. .+.+.+..|+..+...
T Consensus 296 ~vPN~~H~~~~~-------~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 296 YVPNAGHSLIGS-------DVVQSLRAFYNRIQNG 323 (367)
T ss_pred eCCCCCcccchH-------HHHHHHHHHHHHHHcC
Confidence 999999966432 4778899999987654
No 181
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.16 E-value=0.015 Score=45.36 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=28.5
Q ss_pred CCCeeEEEEEecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc
Q 008093 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA 175 (578)
Q Consensus 117 ~~~y~r~~l~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~ 175 (578)
..+.+...+++.||..+.+.-...+.. ..+....+|+|++.||+.++|..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~---------~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKN---------SSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTT---------CTTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCC---------CcccCCCCCcEEEECCcccChHH
Confidence 456789999999999999877765431 11234678999999999776654
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.06 E-value=0.0077 Score=66.33 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=62.3
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCC--CCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcC-
Q 008093 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG- 255 (578)
Q Consensus 179 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p- 255 (578)
..+++.|.+.||. -.|++|...-=....... ..++...+...|+.+.+..++.|++++||||||.+++.++....
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 7889999999996 345555432100111001 12344678888988887777789999999999999998876321
Q ss_pred ---------C---CCCccEEEEEcCCcch
Q 008093 256 ---------E---KTPVAGAAAICSPWDL 272 (578)
Q Consensus 256 ---------~---~~~V~~~Vlis~p~d~ 272 (578)
. +..|++.|.|++|+-.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccCC
Confidence 0 1148899999998743
No 183
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.02 E-value=0.016 Score=52.27 Aligned_cols=37 Identities=16% Similarity=0.344 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
+.+.+.++.+.++++..++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 4566667777788888899999999999998877654
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.96 E-value=0.059 Score=53.65 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=66.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEE
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFA 237 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~l 237 (578)
.| +|++||++.+..+.-+.++.+.+.+. |..|++++. |-| . ...+.....+.+..+.+.++..- -..-+.+
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~---~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--I---KDSSLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--c---chhhhccHHHHHHHHHHHHhcchhccCceEE
Confidence 55 77999996544443457777777664 778888876 222 0 11112223355555666665321 1224899
Q ss_pred EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+|.|.||.++-.++..-+. .+|+..|.+++|-
T Consensus 97 vg~SQGglv~Raliq~cd~-ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDN-PPVKNFISLGGPH 128 (296)
T ss_pred EEEccccHHHHHHHHhCCC-CCcceeEeccCCc
Confidence 9999999998666655544 6899999999875
No 185
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.91 E-value=0.043 Score=54.32 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=59.0
Q ss_pred CCcEEEEECCC-CCCC-ccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCch----HHHHHHHHHHHHHCC-
Q 008093 159 TTPIAIVIPGL-TSDS-AASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT----EDAREVIGYLHHEYP- 231 (578)
Q Consensus 159 ~~PiVVllHGl-~G~s-~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~----~Dl~~~i~~l~~~~~- 231 (578)
++.+|=|+-|. -|.. .-.| +.+.+.|+++||.|++.=+.- .+.+.... +....+++.+..+.+
T Consensus 16 P~gvihFiGGaf~ga~P~itY-r~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITY-RYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CCEEEEEcCcceeccCcHHHH-HHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44556666662 2332 3356 899999999999999986631 11111112 234445555555432
Q ss_pred ---CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEc
Q 008093 232 ---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (578)
Q Consensus 232 ---~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis 267 (578)
.-|++.+|||||+-+-+.+....+. .-++-++|+
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~--~r~gniliS 122 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDV--ERAGNILIS 122 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccC--cccceEEEe
Confidence 2478999999999988776655443 235666664
No 186
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.72 E-value=0.09 Score=53.40 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=63.5
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC----ceEEEEeCCCCCCCCCCCCCCCCC-CchHHH-HHHHHHHHHHC
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGVSITSDCFYNA-GWTEDA-REVIGYLHHEY 230 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G----y~Vvv~D~RG~G~S~~~~~~~~~~-~~~~Dl-~~~i~~l~~~~ 230 (578)
....|++++.||-.- -...=+..+.+.+...| -.++.+|+ .........+++. ...+.+ .+++=++.++|
T Consensus 95 ~~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~---~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 95 LEKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDY---IDVKKRREELHCNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred cccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCC---CCHHHHHHHhcccHHHHHHHHHHhhhhhhccC
Confidence 457899999999421 11111234555665554 23444443 2222111222221 222333 35666888888
Q ss_pred CC----CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 231 PK----APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 231 ~~----~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
|. ..-+++|.||||.+++..+..+|+ .+-.+++-++.+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~ 212 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSF 212 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCcc
Confidence 63 246899999999999999999998 676666665543
No 187
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.65 E-value=0.021 Score=56.37 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
.++...+..+.+++|+.++++.||||||.+|..++...
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 45566666677778899999999999999998777653
No 188
>COG0627 Predicted esterase [General function prediction only]
Probab=95.58 E-value=0.021 Score=59.19 Aligned_cols=115 Identities=18% Similarity=0.283 Sum_probs=66.7
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHH-HHHHhCCceEEEEeC--CCCC------------CCCC---CCCC-CCC-CCch
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLV-FNTAKRGWNVVVSNH--RGLG------------GVSI---TSDC-FYN-AGWT 216 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~-~~l~~~Gy~Vvv~D~--RG~G------------~S~~---~~~~-~~~-~~~~ 216 (578)
+.+-|++.++||.+++....|.+.=+ ....+.|+.++..|- |+.+ .+=. ..+. ... ..|.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 35678999999998765444433333 334557888888632 2222 1100 0000 000 1111
Q ss_pred HH-HHHHHHHHHHHCC-C---CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 217 ED-AREVIGYLHHEYP-K---APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 ~D-l~~~i~~l~~~~~-~---~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.= +.++-..+.+.++ . ..-.++||||||.=++++|..+|+ +++.+...++..+..
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--hhceecccccccccc
Confidence 10 1122223333444 1 268999999999999999999997 888888888766543
No 189
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.57 E-value=0.017 Score=49.70 Aligned_cols=61 Identities=25% Similarity=0.238 Sum_probs=48.4
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 355 VSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 355 I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
-..|+|+|+++.||+.|.+.... ..+..++..+++.++.||..+..+ ..-+.+.|.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~-~~~~l~~s~lvt~~g~gHg~~~~~----s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARA-MAARLPGSRLVTVDGAGHGVYAGG----SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHH-HHHHCCCceEEEEeccCcceecCC----ChHHHHHHHHHHHc
Confidence 36999999999999999886554 456677789999999999988631 12477889999874
No 190
>COG3150 Predicted esterase [General function prediction only]
Probab=95.55 E-value=0.079 Score=49.16 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=51.9
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEch
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSI 242 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSm 242 (578)
+|.+|||.++..+.-...+...+.. |.|-.+.+....+ -...++.+-++.+..+.......+||-|+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~--------~~~~i~y~~p~l~-----h~p~~a~~ele~~i~~~~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE--------DVRDIEYSTPHLP-----HDPQQALKELEKAVQELGDESPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc--------cccceeeecCCCC-----CCHHHHHHHHHHHHHHcCCCCceEEeecc
Confidence 7899999664444332222223322 2222222221111 12345555666666666666689999999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 243 GANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 243 GG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
||+.+..++...+- .+|+++|..
T Consensus 69 GGY~At~l~~~~Gi-----rav~~NPav 91 (191)
T COG3150 69 GGYYATWLGFLCGI-----RAVVFNPAV 91 (191)
T ss_pred hHHHHHHHHHHhCC-----hhhhcCCCc
Confidence 99999988888754 344565543
No 191
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.49 E-value=0.19 Score=54.00 Aligned_cols=135 Identities=17% Similarity=0.208 Sum_probs=75.6
Q ss_pred EEEEec--CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHH----HH----------
Q 008093 123 QLFRLS--DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN----TA---------- 186 (578)
Q Consensus 123 ~~l~~~--DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~----l~---------- 186 (578)
-.+... .+..+-+ |+...+. ...++|+||.+.|-+|+|... -.+.+. +.
T Consensus 14 Gyl~~~~~~~~~lfy-w~~~s~~------------~~~~~Pl~~wlnGGPG~SS~~--g~f~e~GP~~~~~~~~~~l~~n 78 (415)
T PF00450_consen 14 GYLPVNDNENAHLFY-WFFESRN------------DPEDDPLILWLNGGPGCSSMW--GLFGENGPFRINPDGPYTLEDN 78 (415)
T ss_dssp EEEEECTTTTEEEEE-EEEE-SS------------GGCSS-EEEEEE-TTTB-THH--HHHCTTSSEEEETTSTSEEEE-
T ss_pred EEEecCCCCCcEEEE-EEEEeCC------------CCCCccEEEEecCCceecccc--ccccccCceEEeeccccccccc
Confidence 356665 5556664 4443331 246789999999998877642 122110 00
Q ss_pred ----hCCceEEEEe-CCCCCCCCCCCCCCCCCCc---hHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHh---
Q 008093 187 ----KRGWNVVVSN-HRGLGGVSITSDCFYNAGW---TEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG--- 252 (578)
Q Consensus 187 ----~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~~---~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~--- 252 (578)
.+-.+++-+| .-|.|-|-......+..+. .+|+.+++...-.++| ..++++.|-|+||.-+-.+|.
T Consensus 79 ~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 79 PYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred ccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 1226788899 4589988665554332222 3566666665555665 458999999999986554442
Q ss_pred -hcCC----CCCccEEEEEcCCcch
Q 008093 253 -EEGE----KTPVAGAAAICSPWDL 272 (578)
Q Consensus 253 -~~p~----~~~V~~~Vlis~p~d~ 272 (578)
.... ...++|+++.++-.+.
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBH
T ss_pred hccccccccccccccceecCccccc
Confidence 2221 3468898877665544
No 192
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.49 E-value=0.17 Score=48.00 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.++..+++-|+... +..++.++|||+|+.++-..+...+. .++.+|++++|-
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCC
Confidence 58888888888877 77899999999999999887777444 788999998874
No 193
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.48 E-value=0.083 Score=55.57 Aligned_cols=105 Identities=21% Similarity=0.258 Sum_probs=73.5
Q ss_pred CcEEEEECCCCCCCc-----cHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC----------CCchHHHHHHHH
Q 008093 160 TPIAIVIPGLTSDSA-----ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----------AGWTEDAREVIG 224 (578)
Q Consensus 160 ~PiVVllHGl~G~s~-----~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~----------~~~~~Dl~~~i~ 224 (578)
.| |++--|..|+-. ..+|..+++.+ +--+|-..+|=+|.|-.-..+.+. ..-..|.++++.
T Consensus 81 gP-IffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GP-IFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred Cc-eEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 55 678888866432 12334444443 456888899999998543333221 112369999999
Q ss_pred HHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 225 ~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
+++.... ..+++++|-|.||+++.-+=.++|. -+.|+.+-+.|.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPv 202 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPV 202 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCce
Confidence 9988753 5689999999999999988888887 677777777664
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.34 E-value=0.56 Score=47.07 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=34.4
Q ss_pred HHHHHCC--CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 225 ~l~~~~~--~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
++.++|. ..+-.++||||||.+++..+..+|+ .+...++++|.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 4444453 4468999999999999999999988 78888888764
No 195
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.30 E-value=0.011 Score=63.25 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhCCce------EEEEeCCC-CCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHH
Q 008093 176 SYIRHLVFNTAKRGWN------VVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 248 (578)
Q Consensus 176 ~yi~~l~~~l~~~Gy~------Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial 248 (578)
+|+..+++.+..-||. -+.+|+|= +-.+... ......+...++...+.++..|++++||||||.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~r------d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEER------DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHH------HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 4678888888888886 44566663 1111100 122357888888888888889999999999999999
Q ss_pred HHHhhcCCCC------CccEEEEEcCCcc
Q 008093 249 KYLGEEGEKT------PVAGAAAICSPWD 271 (578)
Q Consensus 249 ~ya~~~p~~~------~V~~~Vlis~p~d 271 (578)
.++...+..+ .|++++.++.||-
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhc
Confidence 9998877631 3677777777663
No 196
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.08 E-value=0.037 Score=52.68 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC----CCCccEEEEEcCCcc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICSPWD 271 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~----~~~V~~~Vlis~p~d 271 (578)
.++...++....+.|+.+++++|+|.||.++..++...+- ..+|.++++++.|..
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 5777777777788899999999999999999999887111 116899999987753
No 197
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.83 E-value=0.066 Score=52.89 Aligned_cols=53 Identities=15% Similarity=0.271 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCC--CCCccEEEEEcCCc
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 270 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~--~~~V~~~Vlis~p~ 270 (578)
....+.++.+.+.++. ++.+.|||+||++|...+....+ ..+|..+...++|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3455566666666766 59999999999999977766432 22788888887763
No 198
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=94.64 E-value=0.065 Score=54.27 Aligned_cols=108 Identities=17% Similarity=0.220 Sum_probs=48.3
Q ss_pred CCCcEEEEECCCCCCCccH-HHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCC--C
Q 008093 158 DTTPIAIVIPGLTSDSAAS-YIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--K 232 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~-yi~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~ 232 (578)
..+| ||+.||++.+.... -+..+...+.+ -|--|..++. |-+.++-. ...+.....+.+..+.+.++.. | .
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~-~~s~f~~v~~Qv~~vc~~l~~~-p~L~ 79 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV-ENSFFGNVNDQVEQVCEQLAND-PELA 79 (279)
T ss_dssp SS---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH-HHHHHSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh-hhhHHHHHHHHHHHHHHHHhhC-hhhh
Confidence 3455 77999995332111 13334333332 2655555554 22111000 0000011113333344444331 2 1
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
.-+.++|+|-||.++-.++.+.+. .+|+-+|.+++|-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCcc
Confidence 359999999999999989988765 3799999999875
No 199
>PLN02454 triacylglycerol lipase
Probab=94.09 E-value=0.081 Score=56.45 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHHHCCCCc--EEEEEEchHHHHHHHHHhh
Q 008093 216 TEDAREVIGYLHHEYPKAP--LFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 216 ~~Dl~~~i~~l~~~~~~~~--i~lvGhSmGG~ial~ya~~ 253 (578)
.+++...++.+.++|+..+ |++.||||||.+|+..|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3577778888888898765 9999999999999988754
No 200
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.93 E-value=0.26 Score=53.26 Aligned_cols=111 Identities=20% Similarity=0.191 Sum_probs=79.8
Q ss_pred CCCcEEEEECCCCCCCccHHH----HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC-------CCchHHHHHHHHHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-------AGWTEDAREVIGYL 226 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi----~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-------~~~~~Dl~~~i~~l 226 (578)
++.|+-|++-|=+..+ ..|+ ......+.+.|-.|+.+.||=+|.|......... .....|++++|+.+
T Consensus 84 ~~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPES-DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCC-CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 5668777777743222 1121 1344555667889999999999988544332211 12237999999999
Q ss_pred HHHCC---CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcc
Q 008093 227 HHEYP---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (578)
Q Consensus 227 ~~~~~---~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d 271 (578)
..+++ +.|.+.+|-|+-|.++.-+=..+|+ .+.|+|+-+.|..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--l~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--LTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--hheeeccccccee
Confidence 98884 2489999999999999988888999 8899998888863
No 201
>PLN02162 triacylglycerol lipase
Probab=93.87 E-value=0.14 Score=55.29 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh---hcCCC---CCccEEEEEcCCc
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG---EEGEK---TPVAGAAAICSPW 270 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~---~~p~~---~~V~~~Vlis~p~ 270 (578)
.+.+.++.+..++|+.++++.|||+||.+|...+. .++.. .++.+++..++|-
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 45556666667788889999999999999987654 22221 1345666666653
No 202
>PLN00413 triacylglycerol lipase
Probab=93.84 E-value=0.14 Score=55.36 Aligned_cols=52 Identities=13% Similarity=0.303 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh---cCC-C--CCccEEEEEcCC
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGE-K--TPVAGAAAICSP 269 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~---~p~-~--~~V~~~Vlis~p 269 (578)
++...++.+.+++|+.++++.|||+||++|...+.. +.+ + .++.++...++|
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 466677777788999999999999999999977642 111 1 135566666665
No 203
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=93.81 E-value=0.15 Score=53.58 Aligned_cols=86 Identities=17% Similarity=0.146 Sum_probs=62.6
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEc
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhS 241 (578)
.-||.-|=+| -.. .=+....+|+++|+.|+.+|-.-+=-++.++ ....+|+..++++-..+.+..++.++|+|
T Consensus 262 ~av~~SGDGG-Wr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtP-----e~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGG-WRD-LDKEVAEALQKQGVPVVGVDSLRYFWSERTP-----EQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCc-hhh-hhHHHHHHHHHCCCceeeeehhhhhhccCCH-----HHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4556666533 222 2267888999999999999975554444432 24568999999999999988999999999
Q ss_pred hHHHHHHHHHhhc
Q 008093 242 IGANILVKYLGEE 254 (578)
Q Consensus 242 mGG~ial~ya~~~ 254 (578)
+|+-+.-......
T Consensus 335 fGADvlP~~~n~L 347 (456)
T COG3946 335 FGADVLPFAYNRL 347 (456)
T ss_pred ccchhhHHHHHhC
Confidence 9998875444333
No 204
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=93.57 E-value=0.6 Score=47.11 Aligned_cols=256 Identities=13% Similarity=0.214 Sum_probs=124.7
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 238 (578)
..|.|+++--+.| +....++..++.|.. -..|++-|+-..-..+.....+...+..+-+.++++++ .|+ ++++
T Consensus 102 pdPkvLivapmsG-H~aTLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~--~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSG-HYATLLRGTVEALLP-YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD--AHVM 174 (415)
T ss_pred CCCeEEEEecccc-cHHHHHHHHHHHhcc-ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC--CcEE
Confidence 3467888888865 444556888888765 35788888876555554433322222223333333333 333 5555
Q ss_pred EEchHHHHHH---HHHhhcCCCCCccEEEEEcCCcchhhhhHHHhh----H----H---------------HHHHH----
Q 008093 239 GTSIGANILV---KYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGR----R----L---------------IQKIY---- 288 (578)
Q Consensus 239 GhSmGG~ial---~ya~~~p~~~~V~~~Vlis~p~d~~~~~~~l~~----~----~---------------~~~~~---- 288 (578)
+.+.-+.-++ .+.++.++...-..++++++|.|.......... + + -+++|
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFl 254 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFL 254 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHH
Confidence 5555443222 223344443345688899999886543221110 0 0 00111
Q ss_pred --HHHHHHhHHHHHhhhcccccccCCHHHHhccCCHHHHHhhhhhccCC-----CCCHHHHHHhCCcc-----c-----c
Q 008093 289 --DRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK-----FETVDTYYRNCSSS-----T-----Y 351 (578)
Q Consensus 289 --~~~l~~~l~~~~~~~~~~l~~~~d~~~i~~~~s~~efd~~~~~~~~g-----~~~~~~yy~~~s~~-----~-----~ 351 (578)
...+..++.+.+..|...+..+..-+ -.++....+|.+.+.+.+.- .+++++.+.+.... . .
T Consensus 255 QlagFmsmNldrH~~aH~~~~~~Lv~~D-~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vd 333 (415)
T COG4553 255 QLAGFMSMNLDRHIDAHKDFFLSLVKND-GDSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVD 333 (415)
T ss_pred HhhhHhhcChhhhHHHHHHHHHHHHccc-chhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCC
Confidence 11222233333333333222211111 01122233443333222110 11222222222111 0 1
Q ss_pred cCCC-ccceEEEEeCCCCCCCCCCc--chHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 352 VGNV-SIPLLCISSLDDPVCTVEAI--PWDECRANKN--VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 352 l~~I-~vPvLiI~g~dDpivp~~~~--~~~~~~~~~~--~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
...| ++-++-+-|++|.|.-.... ...+|...+. ....+-++.||.|.+.|.. -+..+.-.+.+|+.....
T Consensus 334 p~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsr-fr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 334 PTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSR-FREEIVPRIRDFIRRYDR 409 (415)
T ss_pred hhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccch-HHHHHHHHHHHHHHHhCc
Confidence 1223 57788999999999765422 2234544432 2445668899999998732 123566788999887643
No 205
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.18 E-value=0.16 Score=50.88 Aligned_cols=52 Identities=27% Similarity=0.340 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+..+++..+++.||+++|.+.|||+||.+|..+-..++- -+|+..+|-|..
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 4677778888999999999999999999999876666654 245666676554
No 206
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.18 E-value=0.16 Score=50.88 Aligned_cols=52 Identities=27% Similarity=0.340 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchh
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+..+++..+++.||+++|.+.|||+||.+|..+-..++- -+|+..+|-|..
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 4677778888999999999999999999999876666654 245666676554
No 207
>PLN02934 triacylglycerol lipase
Probab=92.98 E-value=0.22 Score=54.36 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHh
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~ 252 (578)
.+...++.+.+++|+.++++.|||+||.+|...+.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 46777777888899999999999999999997764
No 208
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=92.91 E-value=0.19 Score=48.72 Aligned_cols=81 Identities=23% Similarity=0.204 Sum_probs=49.8
Q ss_pred CceEEEEeCCCCCCCCCC-CCC----CCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCC----CC
Q 008093 189 GWNVVVSNHRGLGGVSIT-SDC----FYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGE----KT 258 (578)
Q Consensus 189 Gy~Vvv~D~RG~G~S~~~-~~~----~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~----~~ 258 (578)
-.+|+++=||=....... ... .....-..|+.++.++-.+.+ ..+|++++|||.|+.++.+++.+.=+ ..
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~ 124 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRK 124 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHh
Confidence 358999988853322111 110 000111268988888666665 56799999999999999999987522 12
Q ss_pred CccEEEEEcCC
Q 008093 259 PVAGAAAICSP 269 (578)
Q Consensus 259 ~V~~~Vlis~p 269 (578)
++.++-+|+-+
T Consensus 125 rLVAAYliG~~ 135 (207)
T PF11288_consen 125 RLVAAYLIGYP 135 (207)
T ss_pred hhheeeecCcc
Confidence 44455555433
No 209
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.63 E-value=1.5 Score=47.72 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=64.3
Q ss_pred CCCCcEEEEECCCCCCCccHH-HHHHHHH-------------HH------hCCceEEEEe-CCCCCCCCCCCCCCCCCC-
Q 008093 157 DDTTPIAIVIPGLTSDSAASY-IRHLVFN-------------TA------KRGWNVVVSN-HRGLGGVSITSDCFYNAG- 214 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~y-i~~l~~~-------------l~------~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~- 214 (578)
..+.|+|+.+-|-.|+|...- +...... +. .+-.+++-+| .-|.|-|-...+..+...
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 356799999999988776311 0111111 10 0125788889 668888854433222211
Q ss_pred -chHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhh----cC----CCCCccEEEEEcC
Q 008093 215 -WTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGE----EG----EKTPVAGAAAICS 268 (578)
Q Consensus 215 -~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~----~p----~~~~V~~~Vlis~ 268 (578)
..+|+.+++...-+++| ..++++.|.|.||..+-.+|.+ .. ....++|+++-++
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 12455555555445555 4689999999999765555433 11 1236778775554
No 210
>PLN02571 triacylglycerol lipase
Probab=91.68 E-value=0.25 Score=52.87 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~ 253 (578)
+++.+.+..+.++|++. +|++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666666677777654 69999999999999987754
No 211
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=91.63 E-value=0.52 Score=50.01 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCC----CCchHHHHHHHHHHHHHCCC
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----AGWTEDAREVIGYLHHEYPK 232 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~----~~~~~Dl~~~i~~l~~~~~~ 232 (578)
+.++|+|+..-|..- +....-......+ +=+-+.+.+|=+|.|...+ ..+. ..-..|.+.+++.++..|+.
T Consensus 60 ~~drPtV~~T~GY~~-~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p-~DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNV-STSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEP-ADWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred CCCCCeEEEecCccc-ccCccccchhHhh---ccceEEEEEeeccCCCCCC-CCcccccHhHhhHHHHHHHHHHHhhccC
Confidence 467899999999854 3332313333333 2367889999999986553 2222 23347999999999999976
Q ss_pred CcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 233 ~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+.+--|.|=||+.++.|=.-+|+ .|++.|....|.|.
T Consensus 135 -kWISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 135 -KWISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred -CceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 79999999999999988888888 79999998888764
No 212
>PLN02408 phospholipase A1
Probab=91.63 E-value=0.26 Score=51.92 Aligned_cols=38 Identities=29% Similarity=0.293 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~ 254 (578)
+++.+.+..+.++|++. +|++.||||||.+|...|...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45666677777788764 599999999999999776543
No 213
>PLN02209 serine carboxypeptidase
Probab=91.56 E-value=2.5 Score=46.14 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=64.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH----------------HHHh------CCceEEEEe-CCCCCCCCCCCCCCCCC-
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVF----------------NTAK------RGWNVVVSN-HRGLGGVSITSDCFYNA- 213 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~----------------~l~~------~Gy~Vvv~D-~RG~G~S~~~~~~~~~~- 213 (578)
.+.|+|+++-|-.|+|.. + -.+.+ .+.. +-.+++-+| .-|.|-|-...+..+..
T Consensus 66 ~~~Pl~lWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 143 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCL-S-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSD 143 (437)
T ss_pred CCCCEEEEECCCCcHHHh-h-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCC
Confidence 567999999999887753 1 11110 0100 124778888 56788874333222211
Q ss_pred -CchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhhc---C-----CCCCccEEEEEcCCcc
Q 008093 214 -GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE---G-----EKTPVAGAAAICSPWD 271 (578)
Q Consensus 214 -~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~~---p-----~~~~V~~~Vlis~p~d 271 (578)
...+|+.+++...-+++| ..++++.|.|+||.-+-.+|..- . ....++|+++.++-.|
T Consensus 144 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 144 TSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 123455555555445565 46899999999997655444321 1 1235778776665444
No 214
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.41 E-value=2.6 Score=44.28 Aligned_cols=241 Identities=15% Similarity=0.036 Sum_probs=118.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--CCCcEE
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLF 236 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~ 236 (578)
.+|+| ++=||+| ..+.++......+.+.||.++-+-.+-+-.....+.+.. ...+....+..+...+ ...|++
T Consensus 38 ~k~Iv-~~~gWag-~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~---sl~~~~~~l~~L~~~~~~~~~pi~ 112 (350)
T KOG2521|consen 38 EKPIV-VLLGWAG-AIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRIL---SLSLASTRLSELLSDYNSDPCPII 112 (350)
T ss_pred cccEE-EEeeecc-ccchhHHHHHHHHhcCCceEEEecCcccccccccccccc---hhhHHHHHHHHHhhhccCCcCceE
Confidence 34655 5556655 444577788888899999999988776543322222111 1233434455554444 356888
Q ss_pred EEEEchHHHHHHHHH-hh--c--CCCC-CccEEEEEcCCcchhhhhHHHhhHH---HHHHHHHHHHHhHHHHHhhhcccc
Q 008093 237 AIGTSIGANILVKYL-GE--E--GEKT-PVAGAAAICSPWDLLIGDRFIGRRL---IQKIYDRALTIGLQDYAQLHEPRY 307 (578)
Q Consensus 237 lvGhSmGG~ial~ya-~~--~--p~~~-~V~~~Vlis~p~d~~~~~~~l~~~~---~~~~~~~~l~~~l~~~~~~~~~~l 307 (578)
..-+||||...+... .+ . +... ...+.+..+.|.............. ...-...+...+ .+...+
T Consensus 113 fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~------~~i~~~ 186 (350)
T KOG2521|consen 113 FHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLN------YHITLL 186 (350)
T ss_pred EEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcC------eEEEEE
Confidence 899999998876543 11 1 2211 2445666666554322110000000 000000000000 000000
Q ss_pred cccCCHHHHhccCCHHHHHhhhhhccCCCCC-HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcC
Q 008093 308 SRLANWEGIKKSRSIRDFDSHATCLVGKFET-VDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD---ECRAN 383 (578)
Q Consensus 308 ~~~~d~~~i~~~~s~~efd~~~~~~~~g~~~-~~~yy~~~s~~~~l~~I~vPvLiI~g~dDpivp~~~~~~~---~~~~~ 383 (578)
...... .....+.........+... .-++|.. .-.+...+.+.+.+..|.++|.+.+... .....
T Consensus 187 ~~~~~~------~~~~~~~~~~~~~~~~r~~~~~~r~~~-----~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g 255 (350)
T KOG2521|consen 187 TMAGNE------GGAYLLGPLAEKISMSRKYHFLDRYEE-----QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKG 255 (350)
T ss_pred Eeeecc------cchhhhhhhhhccccccchHHHHHHHh-----hhhcccccceeecCCccccccHHHHHHHHHHHHhcC
Confidence 000000 0000000000000011110 0111111 1112246778888999999998866543 23345
Q ss_pred CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcCC
Q 008093 384 KNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHSS 424 (578)
Q Consensus 384 ~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~~ 424 (578)
-++..+-...+-|++++.. .+..+.+...+|++.....
T Consensus 256 ~~v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 256 VNVKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred ceEEEeeccCccceeeecc---CcHHHHHHHHHHHHhcccc
Confidence 5667777788899998874 3446889999999987544
No 215
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.31 E-value=0.35 Score=51.10 Aligned_cols=84 Identities=15% Similarity=0.191 Sum_probs=43.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCCCC--CCchHHHHHHHHHHHHHCCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYPKA 233 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~~~ 233 (578)
.+.-.||+.||+-|+.. .|+...+....+. +..++....+|. .-.+...... .+..+++.+.+... .-.
T Consensus 78 k~~HLvVlthGi~~~~~-~~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~Gv~~lG~Rla~~~~e~~~~~----si~ 150 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADM-EYWKEKIEQMTKKMPDKLIVVRGKMNN--MCQTFDGVDVLGERLAEEVKETLYDY----SIE 150 (405)
T ss_pred CCceEEEeccccccccH-HHHHHHHHhhhcCCCcceEeeeccccc--hhhccccceeeecccHHHHhhhhhcc----ccc
Confidence 44568999999987333 4445555555543 343433333332 2112121111 22223333222211 135
Q ss_pred cEEEEEEchHHHHHH
Q 008093 234 PLFAIGTSIGANILV 248 (578)
Q Consensus 234 ~i~lvGhSmGG~ial 248 (578)
+|-.+|||+||.++.
T Consensus 151 kISfvghSLGGLvar 165 (405)
T KOG4372|consen 151 KISFVGHSLGGLVAR 165 (405)
T ss_pred eeeeeeeecCCeeee
Confidence 899999999998875
No 216
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.36 E-value=0.39 Score=50.49 Aligned_cols=59 Identities=19% Similarity=0.341 Sum_probs=42.6
Q ss_pred CCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh---cCCC-CCccEEEEEcCC
Q 008093 211 YNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGEK-TPVAGAAAICSP 269 (578)
Q Consensus 211 ~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~---~p~~-~~V~~~Vlis~p 269 (578)
+...|...+.+.++.+...+|+-.+.+.||||||.+|...|.. .+.. ..-.+++..+.|
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 3445557888999999999999999999999999999876643 3321 123355556555
No 217
>PLN02847 triacylglycerol lipase
Probab=90.14 E-value=0.52 Score=52.32 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhh
Q 008093 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 218 Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~ 253 (578)
++...+..+..++|+-+++++||||||.+|...+..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344445555667888899999999999998876543
No 218
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=90.05 E-value=0.37 Score=54.03 Aligned_cols=109 Identities=20% Similarity=0.136 Sum_probs=62.9
Q ss_pred CcEEEEECCCCC--CCccHH-HHHHHHHHHhCCceEEEEeCCC--CCCC-CCCCCCCCCCCchHHHHHHHHHHHHHC---
Q 008093 160 TPIAIVIPGLTS--DSAASY-IRHLVFNTAKRGWNVVVSNHRG--LGGV-SITSDCFYNAGWTEDAREVIGYLHHEY--- 230 (578)
Q Consensus 160 ~PiVVllHGl~G--~s~~~y-i~~l~~~l~~~Gy~Vvv~D~RG--~G~S-~~~~~~~~~~~~~~Dl~~~i~~l~~~~--- 230 (578)
.|++|++||.+- ++...+ .......+..+..-||.+++|= .|.- ........+.+ ..|...+++|+++.-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g-l~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG-LFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc-HHHHHHHHHHHHHHHHhc
Confidence 799999999421 121111 1223334445567888899983 3311 11111111222 258999999998753
Q ss_pred --CCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCC
Q 008093 231 --PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (578)
Q Consensus 231 --~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p 269 (578)
+..++.++|||.||..+.........+..+..+|..++.
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 245799999999999986554332221245566666543
No 219
>PLN02324 triacylglycerol lipase
Probab=89.96 E-value=0.45 Score=50.85 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~ 253 (578)
+.+.+.+..+.++|++. .|++.||||||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 45666677777888753 69999999999999977654
No 220
>PLN02719 triacylglycerol lipase
Probab=89.05 E-value=0.54 Score=51.35 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHCCC-----CcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYPK-----APLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~-----~~i~lvGhSmGG~ial~ya~~ 253 (578)
+++.+.+..+.++|++ .+|.+.||||||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5677777777778864 379999999999999987643
No 221
>PLN02802 triacylglycerol lipase
Probab=88.71 E-value=0.6 Score=50.99 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~--~i~lvGhSmGG~ial~ya~~~ 254 (578)
+++.+-+..+.++|++. +|++.||||||.+++..+...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 45566666667778653 699999999999999776543
No 222
>PLN02761 lipase class 3 family protein
Probab=87.80 E-value=0.7 Score=50.63 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHCC------CCcEEEEEEchHHHHHHHHHh
Q 008093 217 EDAREVIGYLHHEYP------KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~------~~~i~lvGhSmGG~ial~ya~ 252 (578)
+++.+.|..+...|+ ..+|++.||||||.+|+..|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 567777777777773 347999999999999997664
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=87.74 E-value=3 Score=45.49 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=62.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHH---HHhCC---------------ceEEEEe-CCCCCCCCC--CCCCCCCCCch
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFN---TAKRG---------------WNVVVSN-HRGLGGVSI--TSDCFYNAGWT 216 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~---l~~~G---------------y~Vvv~D-~RG~G~S~~--~~~~~~~~~~~ 216 (578)
.++|+++.+.|-.|+|.. + -.+.+. -...| =.++-+| .-|.|.|.. ........+..
T Consensus 99 ~~rPvi~wlNGGPGcSS~-~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSV-T-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCceEEEecCCCChHhh-h-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccc
Confidence 578999999999887664 2 122110 00001 2577778 667887753 22222233455
Q ss_pred HHHHHHHHHHHHHCC-----CCcEEEEEEchHHHHHHHHHhhc
Q 008093 217 EDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~-----~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
+|+..+.+.+.+.++ ..+.+++|-|+||.-+..+|.+.
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 899999988877654 24899999999998877776553
No 224
>PLN02753 triacylglycerol lipase
Probab=87.72 E-value=0.71 Score=50.62 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHCC-----CCcEEEEEEchHHHHHHHHHh
Q 008093 217 EDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~-----~~~i~lvGhSmGG~ial~ya~ 252 (578)
+++.+.+..+..+|+ ..+|++.||||||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 566666777777775 358999999999999997764
No 225
>PLN02310 triacylglycerol lipase
Probab=87.56 E-value=0.59 Score=49.95 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHCC----CCcEEEEEEchHHHHHHHHHhh
Q 008093 217 EDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~----~~~i~lvGhSmGG~ial~ya~~ 253 (578)
+.+.+.+..+...|+ ..+|.+.||||||.+|+..+..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445555555655553 4579999999999999877644
No 226
>PLN03037 lipase class 3 family protein; Provisional
Probab=86.21 E-value=0.72 Score=50.52 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHCC----CCcEEEEEEchHHHHHHHHHhh
Q 008093 218 DAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 253 (578)
Q Consensus 218 Dl~~~i~~l~~~~~----~~~i~lvGhSmGG~ial~ya~~ 253 (578)
++.+.+..+.+.|+ ..+|++.||||||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44444555555553 3479999999999999877644
No 227
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.64 E-value=1.9 Score=40.34 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcch
Q 008093 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 221 ~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~ 272 (578)
+.-.|+..+.-....++-|.||||..++++.-++|+ .+.++|+++..+|.
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYda 138 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeChh--HhhhheeecceeeH
Confidence 344456554422357889999999999999999999 88999999888876
No 228
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=83.94 E-value=11 Score=41.31 Aligned_cols=127 Identities=15% Similarity=0.242 Sum_probs=71.8
Q ss_pred EEEEec--CCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCC-----------
Q 008093 123 QLFRLS--DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----------- 189 (578)
Q Consensus 123 ~~l~~~--DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~G----------- 189 (578)
-.++.. +|..+-+..++... ....+|+||.+-|-.|+|.- ..+. .+.|
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~-------------~P~~dPlvLWLnGGPGCSSl---~G~~---~E~GPf~v~~~G~tL 107 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESEN-------------NPETDPLVLWLNGGPGCSSL---GGLF---EENGPFRVKYNGKTL 107 (454)
T ss_pred ceEECCCCCCceEEEEEEEccC-------------CCCCCCEEEEeCCCCCccch---hhhh---hhcCCeEEcCCCCcc
Confidence 355555 46666654444322 23568999999999998873 1222 2222
Q ss_pred ----------ceEEEEeCC-CCCCCCCCCCCCCCC---CchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHh
Q 008093 190 ----------WNVVVSNHR-GLGGVSITSDCFYNA---GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLG 252 (578)
Q Consensus 190 ----------y~Vvv~D~R-G~G~S~~~~~~~~~~---~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~ 252 (578)
-+++-+|.| |-|-|--.++..+.. +-++|..+++...-+++| ..++++.|-|.+|..+-.+|.
T Consensus 108 ~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 108 YLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred eeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 245555654 566664333322222 223566666554445665 578999999999965544443
Q ss_pred ----hcC----CCCCccEEEEEcC
Q 008093 253 ----EEG----EKTPVAGAAAICS 268 (578)
Q Consensus 253 ----~~p----~~~~V~~~Vlis~ 268 (578)
.+. ....++|+++=++
T Consensus 188 ~I~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 188 EILKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred HHHhccccccCCcccceEEEecCc
Confidence 321 1235777764433
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=83.76 E-value=3 Score=43.88 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=33.5
Q ss_pred CCCcEEEEEEchHHHHHHHHHhhcCCC---CCccEEEEEcCCcchh
Q 008093 231 PKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPWDLL 273 (578)
Q Consensus 231 ~~~~i~lvGhSmGG~ial~ya~~~p~~---~~V~~~Vlis~p~d~~ 273 (578)
+.+|+.+||||||+.+....+.+..+. ..|.-+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 677999999999999988766554332 2478999999887654
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=83.72 E-value=4.3 Score=40.13 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=46.9
Q ss_pred CceEEEEeCCC-CCCCCCCCCCCCCCCchHHHHHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhcCC---C-CCccE
Q 008093 189 GWNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGE---K-TPVAG 262 (578)
Q Consensus 189 Gy~Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~p~---~-~~V~~ 262 (578)
|+++..++++. ++-........+...-.+-+..+.+.++... ...+++++|+|.||.++...+.+... . ..-..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 67888888887 2221111111122222233333444444322 56789999999999999887765422 1 12346
Q ss_pred EEEEcCCcc
Q 008093 263 AAAICSPWD 271 (578)
Q Consensus 263 ~Vlis~p~d 271 (578)
+|+++.|..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 788887643
No 231
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=79.24 E-value=11 Score=38.75 Aligned_cols=98 Identities=19% Similarity=0.314 Sum_probs=64.1
Q ss_pred CCCCcEEEEECCCC---CCCccHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCC------------C-CCCCCCchHHH
Q 008093 157 DDTTPIAIVIPGLT---SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITS------------D-CFYNAGWTEDA 219 (578)
Q Consensus 157 ~~~~PiVVllHGl~---G~s~~~yi~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~------------~-~~~~~~~~~Dl 219 (578)
+..+-+|+++-|.. |.....-+-.+...+.. .|-+++++=-.|-|...... . -++..+....+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 34566788888842 11111122344455554 57889999888887542211 0 12223445678
Q ss_pred HHHHHHHHHHC-CCCcEEEEEEchHHHHHHHHHhhc
Q 008093 220 REVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 220 ~~~i~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
..+..++...| |...|+++|+|-|+.++--+|+..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHH
Confidence 88888998888 788999999999999997777653
No 232
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=79.16 E-value=4.8 Score=44.45 Aligned_cols=102 Identities=14% Similarity=0.105 Sum_probs=61.1
Q ss_pred CCCcEEEEECCCC-----CCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--
Q 008093 158 DTTPIAIVIPGLT-----SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-- 230 (578)
Q Consensus 158 ~~~PiVVllHGl~-----G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~-- 230 (578)
.++-+|+-|||-+ +-|++.|++.++..| |.-++.+||--....+.+ .-.+++--+..|+....
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaPFP-------RaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAPFP-------RALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCCCC-------cHHHHHHHHHHHHhcCHHH
Confidence 3455788899842 235678877766554 789999999533322211 23455555555554321
Q ss_pred ---CCCcEEEEEEchHHHHHHHHHhh---cCCCCCccEEEEEcCCc
Q 008093 231 ---PKAPLFAIGTSIGANILVKYLGE---EGEKTPVAGAAAICSPW 270 (578)
Q Consensus 231 ---~~~~i~lvGhSmGG~ial~ya~~---~p~~~~V~~~Vlis~p~ 270 (578)
-.++|+++|-|.||++.+..+.+ ++- ..-+|+++.-+|.
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gv-RvPDGl~laY~pt 508 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGV-RVPDGLMLAYPPT 508 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCC-CCCCceEEecChh
Confidence 24689999999999986654422 222 1234666554543
No 233
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=76.79 E-value=14 Score=35.01 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=33.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
..+|.+|++-|+.|+-.+.-...+.+.|.++|++++++|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4678899999998877776667778889999999999984
No 234
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=73.85 E-value=21 Score=36.43 Aligned_cols=94 Identities=18% Similarity=0.264 Sum_probs=55.5
Q ss_pred cEEEEECCCCCCCccH----HHHHHHHHH-HhCCceEEEEeCCCCCCC--------CCCCC----CCCCCCchHHHHHHH
Q 008093 161 PIAIVIPGLTSDSAAS----YIRHLVFNT-AKRGWNVVVSNHRGLGGV--------SITSD----CFYNAGWTEDAREVI 223 (578)
Q Consensus 161 PiVVllHGl~G~s~~~----yi~~l~~~l-~~~Gy~Vvv~D~RG~G~S--------~~~~~----~~~~~~~~~Dl~~~i 223 (578)
.+||++=|...+.... -+..+...+ ...+-+.+++=..|-|.. ..... .....+..+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 4566776653332211 123444444 223335556667777761 11101 111123456788888
Q ss_pred HHHHHHC-CCCcEEEEEEchHHHHHHHHHhhc
Q 008093 224 GYLHHEY-PKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 224 ~~l~~~~-~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
.++.+.| +...|+++|+|-||.+|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 8887776 677899999999999998877654
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=72.10 E-value=11 Score=39.15 Aligned_cols=79 Identities=16% Similarity=0.218 Sum_probs=48.7
Q ss_pred eEEEEeCC-CCCCCCCCCCCCCCC--CchHHHHHHHHHHHHHCC---CCcEEEEEEchHHHHHHHHHhh----cC----C
Q 008093 191 NVVVSNHR-GLGGVSITSDCFYNA--GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGE----EG----E 256 (578)
Q Consensus 191 ~Vvv~D~R-G~G~S~~~~~~~~~~--~~~~Dl~~~i~~l~~~~~---~~~i~lvGhSmGG~ial~ya~~----~p----~ 256 (578)
+++-+|.| |.|-|-...+..+.. ...+|+..++...-+++| ..++++.|-|.||.-+-.+|.+ .. .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 67888988 888875443322221 123677776666666665 5789999999999765554432 11 1
Q ss_pred CCCccEEEEEcCCc
Q 008093 257 KTPVAGAAAICSPW 270 (578)
Q Consensus 257 ~~~V~~~Vlis~p~ 270 (578)
...++|++ |+.++
T Consensus 83 ~inLkGi~-IGNg~ 95 (319)
T PLN02213 83 PINLQGYM-LGNPV 95 (319)
T ss_pred ceeeeEEE-eCCCC
Confidence 13577766 44443
No 236
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=71.43 E-value=6.2 Score=35.24 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=25.1
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW 190 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy 190 (578)
.+.+|.|+-+||++|.-...-.+.+++.+-..|.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 4678999999999886665444666677666663
No 237
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=67.23 E-value=27 Score=33.99 Aligned_cols=56 Identities=25% Similarity=0.335 Sum_probs=40.2
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCc-eEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW-NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE 229 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy-~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~ 229 (578)
..+.-+|+++||....+.+.| ..+-..+.+.|| +|++...-|+.. +..+++++++.
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~yP~----------------~d~vi~~l~~~ 191 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGYPL----------------VDTVIEYLRKN 191 (265)
T ss_pred CcCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCCCc----------------HHHHHHHHHHc
Confidence 345678999999876666667 566667778899 787777655532 66788888764
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=66.99 E-value=17 Score=40.19 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=57.4
Q ss_pred HHHhCCceEEEEeCCCCCCCCCCCCCCCCC----------CchHHHHHHHHHHHHHC---CCCcEEEEEEchHHHHHHHH
Q 008093 184 NTAKRGWNVVVSNHRGLGGVSITSDCFYNA----------GWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 184 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~----------~~~~Dl~~~i~~l~~~~---~~~~i~lvGhSmGG~ial~y 250 (578)
....+||.++.-|- ||..+.......+.. .-..+...+-+.|.+.| +...-+..|.|-||.-+++.
T Consensus 54 ~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~ 132 (474)
T PF07519_consen 54 TALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMA 132 (474)
T ss_pred hhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHH
Confidence 44567999998886 665553310111110 11123333444444443 34568999999999999999
Q ss_pred HhhcCCCCCccEEEEEcCCcchh
Q 008093 251 LGEEGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 251 a~~~p~~~~V~~~Vlis~p~d~~ 273 (578)
|.++|+ .++|+++-+|.++..
T Consensus 133 AQryP~--dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 133 AQRYPE--DFDGILAGAPAINWT 153 (474)
T ss_pred HHhChh--hcCeEEeCCchHHHH
Confidence 999999 899999998887653
No 239
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=65.15 E-value=11 Score=41.03 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=61.3
Q ss_pred CCCCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCce-EEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHC--C
Q 008093 155 SKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--P 231 (578)
Q Consensus 155 ~~~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~ 231 (578)
|++-..|..|.+-|+-. .+.+ .. ...+.+.|.- .+.-|.|=-|++=.... ....+-+.++|+.-.+.. .
T Consensus 284 PGD~KPPL~VYFSGyR~--aEGF-Eg-y~MMk~Lg~PfLL~~DpRleGGaFYlGs----~eyE~~I~~~I~~~L~~LgF~ 355 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP--AEGF-EG-YFMMKRLGAPFLLIGDPRLEGGAFYLGS----DEYEQGIINVIQEKLDYLGFD 355 (511)
T ss_pred CcCCCCCeEEeeccCcc--cCcc-hh-HHHHHhcCCCeEEeeccccccceeeeCc----HHHHHHHHHHHHHHHHHhCCC
Confidence 45556788999999853 3322 11 1122334544 44558887776521111 111234444444433333 3
Q ss_pred CCcEEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcCCc
Q 008093 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (578)
Q Consensus 232 ~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~ 270 (578)
...+++-|.|||..=|+.|++.... .+|.++-|.
T Consensus 356 ~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 356 HDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred HHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 5579999999999999999988765 566777664
No 240
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=63.95 E-value=6.8 Score=37.58 Aligned_cols=67 Identities=15% Similarity=0.150 Sum_probs=43.7
Q ss_pred CCC-ccceEEEEeCCCCCCCCCC--cchHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHh
Q 008093 353 GNV-SIPLLCISSLDDPVCTVEA--IPWDECRANKN--VVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGV 420 (578)
Q Consensus 353 ~~I-~vPvLiI~g~dDpivp~~~--~~~~~~~~~~~--~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~ 420 (578)
+.| ++++|-|-|+.|.|+.... ....+|...|. ....+.+++||.|.|.|..= ...+.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rw-r~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRW-REEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhh-hhhhhHHHHHHHHh
Confidence 345 6788889999999998762 22345544432 45567789999999986210 11244567788764
No 241
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=61.29 E-value=28 Score=42.01 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=57.7
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC--CCCCCCCCCCCCchHHHHH-HHHHHHHHCCCCc
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG--VSITSDCFYNAGWTEDARE-VIGYLHHEYPKAP 234 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~--S~~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~ 234 (578)
...|++.|+|-+.|. .... ..++..+. .+-+|. ++.. | .+..+++.+ .|+.+++-.|..|
T Consensus 2121 se~~~~Ffv~pIEG~-tt~l-~~la~rle----------~PaYglQ~T~~v-P----~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGF-TTAL-ESLASRLE----------IPAYGLQCTEAV-P----LDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred ccCCceEEEeccccc-hHHH-HHHHhhcC----------CcchhhhccccC-C----cchHHHHHHHHHHHHHhcCCCCC
Confidence 456779999988663 3222 34433321 222221 1111 1 123455554 5777887789999
Q ss_pred EEEEEEchHHHHHHHHHhhcCCCCCccEEEEEcC
Q 008093 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (578)
Q Consensus 235 i~lvGhSmGG~ial~ya~~~p~~~~V~~~Vlis~ 268 (578)
.-++|+|+|+.++..++....+....+.+++++.
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 9999999999999998876554334555777764
No 242
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=58.67 E-value=17 Score=33.81 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=31.2
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+|.||++-|+.|+-.+...+.+...|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 46799999999888877778888889999999999984
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=58.60 E-value=21 Score=39.83 Aligned_cols=54 Identities=20% Similarity=0.276 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHC-C-CCcEEEEEEchHHHHHHHHHhhc-----CC----CCCccEEEEEcCCcch
Q 008093 219 AREVIGYLHHEY-P-KAPLFAIGTSIGANILVKYLGEE-----GE----KTPVAGAAAICSPWDL 272 (578)
Q Consensus 219 l~~~i~~l~~~~-~-~~~i~lvGhSmGG~ial~ya~~~-----p~----~~~V~~~Vlis~p~d~ 272 (578)
..++++.+.+.- + +++++.+||||||.++=+.+-.. |+ ...-.|++.++.|...
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 345666665443 3 67999999999998876655332 22 1135688888888544
No 244
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=56.74 E-value=20 Score=31.37 Aligned_cols=35 Identities=11% Similarity=0.033 Sum_probs=18.2
Q ss_pred EecCCcEEEEEEecCCCCCCCccccccccCCCCCCcEEEEECCCCCCCcc
Q 008093 126 RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA 175 (578)
Q Consensus 126 ~~~DG~~i~ldw~~~~~~~~~~~~~~~~~~~~~~~PiVVllHGl~G~s~~ 175 (578)
+.-||..|+.-....+ .++..++|++||+.|+--+
T Consensus 73 t~I~g~~iHFih~rs~---------------~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 73 TEIDGLDIHFIHVRSK---------------RPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEETTEEEEEEEE--S----------------TT-EEEEEE--SS--GGG
T ss_pred EEEeeEEEEEEEeeCC---------------CCCCeEEEEECCCCccHHh
Confidence 3347888887655432 2455568999999886554
No 245
>PF03283 PAE: Pectinacetylesterase
Probab=51.45 E-value=31 Score=36.65 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHH-CC-CCcEEEEEEchHHHHHHHHH
Q 008093 217 EDAREVIGYLHHE-YP-KAPLFAIGTSIGANILVKYL 251 (578)
Q Consensus 217 ~Dl~~~i~~l~~~-~~-~~~i~lvGhSmGG~ial~ya 251 (578)
.-+.++++++..+ .+ .+++++.|.|.||.-++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 5678899999887 54 35799999999998887654
No 246
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=49.96 E-value=30 Score=31.30 Aligned_cols=45 Identities=24% Similarity=0.460 Sum_probs=34.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS 207 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~ 207 (578)
+|.+-|..++-.+..++.++..|.++||+|.++=+-+||+.....
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~ 46 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDP 46 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCC
Confidence 567778877777888999999999999999988887887765543
No 247
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=48.57 E-value=1.4e+02 Score=25.56 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=53.9
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchHHHH--HHHHHhhcCC
Q 008093 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANI--LVKYLGEEGE 256 (578)
Q Consensus 179 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~i--al~ya~~~p~ 256 (578)
..+.+.+..+||-.-.+.+|..|.+-. .....+..+-=.+.++.+.+.+|+.++++||=|=-.=. -..++.++|+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~---~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLS---GLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccc---ccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 566667777888887888888865421 22222222233567788889999999999998865532 2345778888
Q ss_pred CCCccEEE
Q 008093 257 KTPVAGAA 264 (578)
Q Consensus 257 ~~~V~~~V 264 (578)
+|.++.
T Consensus 91 --~i~ai~ 96 (100)
T PF09949_consen 91 --RILAIY 96 (100)
T ss_pred --CEEEEE
Confidence 776654
No 248
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.97 E-value=34 Score=37.57 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=33.0
Q ss_pred CCCCcEEEEEEchHHHHHHHHHhh---cCCCCCccEEEEEcCCcchh
Q 008093 230 YPKAPLFAIGTSIGANILVKYLGE---EGEKTPVAGAAAICSPWDLL 273 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya~~---~p~~~~V~~~Vlis~p~d~~ 273 (578)
.+.+|+.+||+|+|+-+....+.+ ..+-.-|.-+++++.|....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 478899999999999998866543 22323578899999887553
No 249
>PF13396 PLDc_N: Phospholipase_D-nuclease N-terminal
Probab=47.68 E-value=7.9 Score=27.74 Aligned_cols=26 Identities=38% Similarity=0.979 Sum_probs=18.7
Q ss_pred ccchhhhHHHHHHhcccchhhhHHHHHhhc
Q 008093 537 KRSMWLLAYVAIITTWPLVGSALRFIFGKK 566 (578)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (578)
.+-.|+++ +.--|.+|.+++++++||
T Consensus 21 ~k~~W~~~----i~~~P~iG~i~Yl~~gr~ 46 (46)
T PF13396_consen 21 SKILWLIV----ILFFPIIGPILYLIFGRK 46 (46)
T ss_pred hhhHHHHH----HHHHHHHHHhheEEEeCC
Confidence 34455543 334699999999999986
No 250
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=46.42 E-value=36 Score=37.60 Aligned_cols=64 Identities=16% Similarity=0.067 Sum_probs=45.5
Q ss_pred ccceEEEEeCCCCCCCCCCc-chHH---Hh-------cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhh
Q 008093 356 SIPLLCISSLDDPVCTVEAI-PWDE---CR-------ANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVL 421 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~-~~~~---~~-------~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~ 421 (578)
--.+|+.||..|+++|+... .++. .. ...-.++.++|+.+||+--.+ +...-...++++|+++=
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g--~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG--PDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC--CCCCCHHHHHHHHHhCC
Confidence 46799999999999998742 2221 11 133578999999999996554 33334778899998863
No 251
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=40.55 E-value=34 Score=34.69 Aligned_cols=40 Identities=15% Similarity=0.293 Sum_probs=34.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
...|+||++.|+.++....-++.+...+..+|++|+++.-
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 3469999999998877778889999999999999998843
No 252
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=40.36 E-value=1.4e+02 Score=29.56 Aligned_cols=92 Identities=18% Similarity=0.126 Sum_probs=50.7
Q ss_pred CCcEEEEECCCCC-CCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCC-CCCCCC-CCCchHHHHHH------HHHHHHH
Q 008093 159 TTPIAIVIPGLTS-DSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI-TSDCFY-NAGWTEDAREV------IGYLHHE 229 (578)
Q Consensus 159 ~~PiVVllHGl~G-~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~-~~~~~~-~~~~~~Dl~~~------i~~l~~~ 229 (578)
..|.|+|++--.. .....|++.+...+.+.|+.+..++...--.-.. .....| ..|.+--+... .+.+++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 3567999997532 2345788888888889999988887642100000 011111 12222222111 1223333
Q ss_pred CCCCcEEEEEEchHHHHHHHHH
Q 008093 230 YPKAPLFAIGTSIGANILVKYL 251 (578)
Q Consensus 230 ~~~~~i~lvGhSmGG~ial~ya 251 (578)
+.. -..++|.|.|++++....
T Consensus 110 ~~~-G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 VKN-GTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHC-CCEEEEECHHHHhhhccc
Confidence 222 378999999999976443
No 253
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=40.23 E-value=2.2 Score=42.55 Aligned_cols=95 Identities=20% Similarity=0.216 Sum_probs=52.1
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC----------CCCCCCCCCCCCCCCCCchHHHHHHHH---
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH----------RGLGGVSITSDCFYNAGWTEDAREVIG--- 224 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~----------RG~G~S~~~~~~~~~~~~~~Dl~~~i~--- 224 (578)
..-|.+++.||+++...... ..+..++..++.+...+. +|++.+..............+...++.
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSL--GYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY 124 (299)
T ss_pred ccCceEEeccCccccccCcc--hHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHH
Confidence 45788999999966544432 267788888888777764 333332221111111101111111111
Q ss_pred HHHHHCCCCcEEEEEEchHHHHHHHHHhhcC
Q 008093 225 YLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (578)
Q Consensus 225 ~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p 255 (578)
...... ..+....|+++|+..+..++...+
T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 125 RLLGAS-LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHhhh-cCcceEEEEEeeccchHHHhhcch
Confidence 111111 247888899999888888877765
No 254
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=39.52 E-value=2.2e+02 Score=29.81 Aligned_cols=94 Identities=16% Similarity=0.221 Sum_probs=60.0
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHH--------------HHHhCCceEEEEe-CCCCCCCCCCCCCCCCCCch---HHH
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVF--------------NTAKRGWNVVVSN-HRGLGGVSITSDCFYNAGWT---EDA 219 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~--------------~l~~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~~~---~Dl 219 (578)
..+|..+.+.|-.|.|...| -.+-+ .+.+ -.++-+| .-|.|.|-......|..... .|+
T Consensus 29 s~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl 105 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDL 105 (414)
T ss_pred cCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHH
Confidence 56789999999888777655 22221 1111 2445555 45788775444445554333 466
Q ss_pred HHHHHHHHHHC---CCCcEEEEEEchHHHHHHHHHhhc
Q 008093 220 REVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGEE 254 (578)
Q Consensus 220 ~~~i~~l~~~~---~~~~i~lvGhSmGG~ial~ya~~~ 254 (578)
.++++.+-..+ ...|++++--|.||-++.+++.+.
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 66666554433 467999999999999998877553
No 255
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=39.05 E-value=82 Score=32.14 Aligned_cols=64 Identities=23% Similarity=0.274 Sum_probs=42.6
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCceEEEE------eCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH--HCCCCcEE
Q 008093 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVS------NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH--EYPKAPLF 236 (578)
Q Consensus 165 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~------D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~--~~~~~~i~ 236 (578)
++||..|++.. +..+...|++|+++ |+.|+|...+.. .-.+++.++++.+.. ....-..+
T Consensus 10 Vv~G~vGn~AA------~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v------~~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 10 VVYGSVGNSAA------IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV------MPPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred EeecccccHhH------HHHHHHcCCceeeeceEEecCCCCCCCCCCcC------CCHHHHHHHHHHHHhcccccccCEE
Confidence 56788776554 34567789988776 688998754321 124777888887776 33445678
Q ss_pred EEEE
Q 008093 237 AIGT 240 (578)
Q Consensus 237 lvGh 240 (578)
+-|+
T Consensus 78 ltGY 81 (281)
T COG2240 78 LTGY 81 (281)
T ss_pred EEcc
Confidence 8887
No 256
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=37.44 E-value=40 Score=33.41 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=33.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
..|+||++.|+.++....-++.+...+..+|++|.++..
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~ 67 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPK 67 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 469999999998877777889999999999999988754
No 257
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=35.90 E-value=1.9e+02 Score=29.33 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=27.7
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
++++++|+..+..+.+...+++.|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 46667776434455566889999999999998887654
No 258
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=35.82 E-value=50 Score=33.67 Aligned_cols=41 Identities=15% Similarity=0.253 Sum_probs=35.4
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
...+|++|++-|+.|+....|++.+..++.+.+-+.+++|+
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 15 AIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred cccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 35678899999999998889999999999988887888876
No 259
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=35.79 E-value=2.2e+02 Score=27.54 Aligned_cols=85 Identities=15% Similarity=0.208 Sum_probs=50.6
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhC-CceEEEEeCCCCCCCCC-----CCCCCCCCCchHHHHHHHHHH------
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSI-----TSDCFYNAGWTEDAREVIGYL------ 226 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~-----~~~~~~~~~~~~Dl~~~i~~l------ 226 (578)
..+-|++++--.+ ....|...+...+.+. |+.+..++... .... .....+..| .+...+++.+
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G--G~~~~~~~~l~~~~l~ 104 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG--GNTFNLLAQWREHGLD 104 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC--chHHHHHHHHHHcCHH
Confidence 4566889987644 4556778888889999 99999988754 1110 011111111 1222222222
Q ss_pred ---HHHCCCCcEEEEEEchHHHHHHH
Q 008093 227 ---HHEYPKAPLFAIGTSIGANILVK 249 (578)
Q Consensus 227 ---~~~~~~~~i~lvGhSmGG~ial~ 249 (578)
+..+ .....++|.|.|+.++..
T Consensus 105 ~~l~~~~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 105 AILKAAL-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHH-HCCCEEEEECHhHHhhCC
Confidence 2222 224789999999999875
No 260
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=35.43 E-value=1.3e+02 Score=28.66 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=39.0
Q ss_pred EEECCCCCCCccHHHHHHHHHHHh----CCceEEEEeCCCCCCCCCCC-CCCC---CCCchHHHHHHHHHHHH
Q 008093 164 IVIPGLTSDSAASYIRHLVFNTAK----RGWNVVVSNHRGLGGVSITS-DCFY---NAGWTEDAREVIGYLHH 228 (578)
Q Consensus 164 VllHGl~G~s~~~yi~~l~~~l~~----~Gy~Vvv~D~RG~G~S~~~~-~~~~---~~~~~~Dl~~~i~~l~~ 228 (578)
+++-|-+|+-.+.+++.++..++. ...+++++|..|.+...... +... .....+++.++++++..
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVE 113 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHH
Confidence 467788788888888888888887 68999999999764332221 1111 12334566666665543
No 261
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=35.38 E-value=1e+02 Score=32.66 Aligned_cols=66 Identities=9% Similarity=0.090 Sum_probs=47.2
Q ss_pred ccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHhhcC
Q 008093 351 YVGNVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAAGMWWVRAVNEYLGVLHS 423 (578)
Q Consensus 351 ~l~~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~~~~v~eFL~~~~~ 423 (578)
+-.++.+|-.+++|..|.+.+++....+.........+..+|+..|..--. ...+.+.-|++.+..
T Consensus 324 y~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~-------~i~esl~~flnrfq~ 389 (507)
T COG4287 324 YQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ-------FIKESLEPFLNRFQM 389 (507)
T ss_pred hhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH-------HHHHHHHHHHHHHhc
Confidence 346778999999999999888876655455566778889999999965322 344566667666643
No 262
>PRK00889 adenylylsulfate kinase; Provisional
Probab=34.70 E-value=73 Score=29.52 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=30.6
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+.+|++.|+.|+..+...+.++..+...|+.++.+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4488899999988888888888888888888888864
No 263
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.09 E-value=63 Score=33.36 Aligned_cols=64 Identities=20% Similarity=0.157 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCC--CCCCCchHHHHHHHHHHHHHCCCCc-----EEEEEEch
Q 008093 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDC--FYNAGWTEDAREVIGYLHHEYPKAP-----LFAIGTSI 242 (578)
Q Consensus 179 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~--~~~~~~~~Dl~~~i~~l~~~~~~~~-----i~lvGhSm 242 (578)
.+.+..|.+.||.|+++|.--.|........ .+..+...|-..+-+.+.+..+..- ...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv 84 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESV 84 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhh
Confidence 4567888899999999999887765433221 2233445554444444444334332 34566665
No 264
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=30.89 E-value=2.2e+02 Score=25.93 Aligned_cols=75 Identities=13% Similarity=0.257 Sum_probs=45.2
Q ss_pred cEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEE
Q 008093 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (578)
Q Consensus 161 PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 239 (578)
+.-++-.|.+|.....+...+-..+......++++-. |.-.... . .....+.+++..+++.+++.+|..++++++
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~-G~ND~~~--~-~~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFL-GTNDIGK--E-VSSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEe-ccccCCC--C-CCHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3456788988877666655554555566666666653 3222111 1 111234578888888888877776777665
No 265
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=30.34 E-value=80 Score=29.08 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=30.9
Q ss_pred EEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 164 VllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
+.+-|..|+.....+..++..+.++|++|.++.+-+|+
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45668877777777788999998999999999976654
No 266
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=30.07 E-value=26 Score=34.74 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=31.3
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
..|+||++.|+.|+....-++.+...+..+|++|.++.-+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4579999999988777777788888888899999998754
No 267
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=30.06 E-value=71 Score=33.00 Aligned_cols=32 Identities=19% Similarity=0.418 Sum_probs=21.5
Q ss_pred CCCCcEEEEECCCCCCCccHHH-HHHHHHHHhCC
Q 008093 157 DDTTPIAIVIPGLTSDSAASYI-RHLVFNTAKRG 189 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi-~~l~~~l~~~G 189 (578)
.+.+|.|+=+||++|... .|+ +.+++.+...|
T Consensus 106 ~p~KPLvLSfHG~tGTGK-N~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGK-NYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCeEEEecCCCCCch-hHHHHHHHHHHHhcc
Confidence 478999999999988555 453 44444554444
No 268
>PRK07933 thymidylate kinase; Validated
Probab=29.34 E-value=1.1e+02 Score=29.80 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=35.5
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 204 (578)
+|.+=|.-|+..+.-++.+++.|..+|+.|++...+++|+++
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~~ 43 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRSV 43 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 567778888878888899999999999999999999877643
No 269
>CHL00175 minD septum-site determining protein; Validated
Probab=29.27 E-value=1e+02 Score=31.03 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=30.4
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~R 198 (578)
...+|.+..|-+|...+....+++..|++.|++|+++|.=
T Consensus 14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3456777777766556666678899999999999999873
No 270
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=29.08 E-value=1.1e+02 Score=28.88 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=35.1
Q ss_pred CcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 160 ~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
.+.|+.+=|..|+-.+..++.++..+..+|++|-++-+-|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 3456777798888888888999999988899998888877764
No 271
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.74 E-value=82 Score=34.12 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=27.3
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008093 357 IPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEG 402 (578)
Q Consensus 357 vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg 402 (578)
.-+++.+|..||....... ...+..+...++++|+||.-+..
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeeccccC
Confidence 4799999999999776522 22456677788999999987764
No 272
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=28.68 E-value=85 Score=32.62 Aligned_cols=60 Identities=22% Similarity=0.039 Sum_probs=38.0
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHH-----------------------hcCCC-EEEEEeCCCCccccccccccCcccHH
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDEC-----------------------RANKN-VVLATTWHGGHLAFFEGLTAAGMWWV 411 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~-----------------------~~~~~-~~l~~~~~GGH~~~~eg~~~~~~w~~ 411 (578)
.+++|+.+|..|-+|+.-....... +...+ ..++.+.++||+.. . .|. ...
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~--qP~--~al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y--RPN--ETF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c--CHH--HHH
Confidence 4899999999999888632111000 11123 78888889999884 2 233 355
Q ss_pred HHHHHHHHh
Q 008093 412 RAVNEYLGV 420 (578)
Q Consensus 412 ~~v~eFL~~ 420 (578)
+.+..|+..
T Consensus 308 ~m~~~fi~~ 316 (319)
T PLN02213 308 IMFQRWISG 316 (319)
T ss_pred HHHHHHHcC
Confidence 667777653
No 273
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=28.36 E-value=47 Score=33.88 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=45.4
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCc-------eEEEEeCCCCCCCCCCC--C-C-CCCC----CchHHHHHHHHHHH
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGW-------NVVVSNHRGLGGVSITS--D-C-FYNA----GWTEDAREVIGYLH 227 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy-------~Vvv~D~RG~G~S~~~~--~-~-~~~~----~~~~Dl~~~i~~l~ 227 (578)
-|++.|. |+..-.-.+.+...+.+.|. +++.+|..|.=...... + + .|.. ....++.++++.++
T Consensus 27 ~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 4567776 44443344556666666687 89999999942221110 0 0 0000 01235666666553
Q ss_pred HHCCCCcEEEEEEch-HHHHHHHHHh
Q 008093 228 HEYPKAPLFAIGTSI-GANILVKYLG 252 (578)
Q Consensus 228 ~~~~~~~i~lvGhSm-GG~ial~ya~ 252 (578)
+=+++|.|- ||.+.-.++.
T Consensus 106 ------ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 106 ------PTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred ------CCEEEEeCCCCCCCCHHHHH
Confidence 459999994 6755444443
No 274
>PRK03846 adenylylsulfate kinase; Provisional
Probab=28.34 E-value=2.7e+02 Score=26.36 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=30.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
..+|.+|.+.|..|+..+...+.+...+...|+.++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 356789999999887777776777777777788888876
No 275
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=27.49 E-value=3.1e+02 Score=28.12 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=27.6
Q ss_pred cEEEEEEchHHHHHHHHHh---hcCCCCCccEEEEEcCCcch
Q 008093 234 PLFAIGTSIGANILVKYLG---EEGEKTPVAGAAAICSPWDL 272 (578)
Q Consensus 234 ~i~lvGhSmGG~ial~ya~---~~p~~~~V~~~Vlis~p~d~ 272 (578)
++++.|.|+|+.-+..... .... +++|++..++|...
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~--~vdGalw~GpP~~s 149 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRD--RVDGALWVGPPFFS 149 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhh--hcceEEEeCCCCCC
Confidence 6999999999987664432 2233 69999999988643
No 276
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=27.30 E-value=93 Score=24.73 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=25.2
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCceEEEEe
Q 008093 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (578)
Q Consensus 165 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D 196 (578)
++-|..|...+.....++..+++.|++|+++|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 44455566666677888999999999999999
No 277
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=26.72 E-value=1.1e+02 Score=28.56 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=34.8
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
.|+=+=|+.++-....+..+++.|.++||+|.++-+-+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 3667778877667788899999999999999999999998
No 278
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=25.95 E-value=7.1e+02 Score=28.19 Aligned_cols=106 Identities=21% Similarity=0.206 Sum_probs=65.5
Q ss_pred CCCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC-CCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcE
Q 008093 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG-GVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPL 235 (578)
Q Consensus 157 ~~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G-~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 235 (578)
+.+.|.|+-+-|=.|...+..++.+++.+.+.-. -+.+|-= -+.+...++....+.+|+.++|+-.+.. .+
T Consensus 65 d~PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti----~~i~GPiTvvsgK~RRiTflEcp~Dl~~miDvaKIa----DL 136 (1077)
T COG5192 65 DLPPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTI----DEIRGPITVVSGKTRRITFLECPSDLHQMIDVAKIA----DL 136 (1077)
T ss_pred cCCCCeEEEeecCCCCChhHHHHHHHHHHHHhhh----hccCCceEEeecceeEEEEEeChHHHHHHHhHHHhh----he
Confidence 3455777778887777788889999998876422 1333311 1112223333334558999999877653 22
Q ss_pred EE------EEEchHHHHHHHHHhhcCCCCCccEEEEEcCCcchhh
Q 008093 236 FA------IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (578)
Q Consensus 236 ~l------vGhSmGG~ial~ya~~~p~~~~V~~~Vlis~p~d~~~ 274 (578)
++ +|+-|-.+=-+..+..++-. +|-|++ .-.|+..
T Consensus 137 VlLlIdgnfGfEMETmEFLnil~~HGmP-rvlgV~---ThlDlfk 177 (1077)
T COG5192 137 VLLLIDGNFGFEMETMEFLNILISHGMP-RVLGVV---THLDLFK 177 (1077)
T ss_pred eEEEeccccCceehHHHHHHHHhhcCCC-ceEEEE---eeccccc
Confidence 22 58888888888888888652 455554 3445543
No 279
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=25.81 E-value=90 Score=29.05 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=23.4
Q ss_pred EECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 165 llHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+..+=+|...+.....++..++++|++|+++|.
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 444444444555556788999999999999998
No 280
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=25.74 E-value=2.2e+02 Score=25.92 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=42.9
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEE
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGh 240 (578)
.-++-.|+.|.........+...+......++++-. |.... . .........+.+.++++.+++..|..++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~-G~ND~--~-~~~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYA-GDNDL--A-SGRTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEEE-ecCcc--c-CCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 346788998876655544444444444555555522 22211 1 001122345778888998888888778887764
No 281
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.73 E-value=1.8e+02 Score=27.34 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=40.9
Q ss_pred HHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEEEEEchH
Q 008093 184 NTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIG 243 (578)
Q Consensus 184 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvGhSmG 243 (578)
.|.+.|++.+++|.=.+=-. + +......++.+.++.+++.++..++.+|--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~----~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTP----P--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCC----C--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 37789999999998654211 1 222334789999999999988778999999986
No 282
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=25.45 E-value=2.7e+02 Score=27.86 Aligned_cols=90 Identities=13% Similarity=0.165 Sum_probs=47.9
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCce-EEEEeCCCCCCC--CCC------CCCC-CCCCchHHHH------HH
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGGV--SIT------SDCF-YNAGWTEDAR------EV 222 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~-Vvv~D~RG~G~S--~~~------~~~~-~~~~~~~Dl~------~~ 222 (578)
..|-|++++--.+ ....|.+.....+.+.|+. |-.++.+.-... +.. .... ...+.+.-+. .+
T Consensus 27 ~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~l 105 (250)
T TIGR02069 27 EDAIIVIITSASE-EPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTPL 105 (250)
T ss_pred CCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCcH
Confidence 3467889996533 4456667778888889984 666666431111 100 0011 1122222222 11
Q ss_pred HHHHHHHCCCCcEEEEEEchHHHHHHHH
Q 008093 223 IGYLHHEYPKAPLFAIGTSIGANILVKY 250 (578)
Q Consensus 223 i~~l~~~~~~~~i~lvGhSmGG~ial~y 250 (578)
.+.+++.+.. -.+++|.|.|++++...
T Consensus 106 ~~~l~~~~~~-G~vi~G~SAGA~i~~~~ 132 (250)
T TIGR02069 106 LDRLRKRVHE-GIILGGTSAGAAVMSDT 132 (250)
T ss_pred HHHHHHHHHc-CCeEEEccHHHHhcccc
Confidence 1223333322 37899999999987643
No 283
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=25.17 E-value=80 Score=34.05 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=40.3
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccC-cccHHHHHHHHH
Q 008093 354 NVSIPLLCISSLDDPVCTVEAIPWDECRANKNVVLATTWHGGHLAFFEGLTAA-GMWWVRAVNEYL 418 (578)
Q Consensus 354 ~I~vPvLiI~g~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~~~eg~~~~-~~w~~~~v~eFL 418 (578)
+-.--+|+|+|++||..-... ..-....+....+.++|.|-+-+.++.+. +......|.+|.
T Consensus 349 ~~~~rmlFVYG~nDPW~A~~f---~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAEPF---RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred hCCCeEEEEeCCCCCcccCcc---ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 334579999999999864331 12223457788888999999888776443 223445555553
No 284
>PF13721 SecD-TM1: SecD export protein N-terminal TM region
Probab=24.78 E-value=53 Score=28.05 Aligned_cols=24 Identities=25% Similarity=0.510 Sum_probs=17.6
Q ss_pred ccchhHHHHHHHHHHHHhheeeee
Q 008093 29 LIPISHYVLALSLLFVIVIYNFLE 52 (578)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~y~~l~ 52 (578)
.-|.|+|++.+++++++++|-.=+
T Consensus 3 ~yp~WKyllil~vl~~~~lyALPn 26 (101)
T PF13721_consen 3 RYPLWKYLLILVVLLLGALYALPN 26 (101)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhh
Confidence 348899999777776777765554
No 285
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=23.84 E-value=1.2e+02 Score=30.57 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=30.0
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~ 202 (578)
++.++ |=+|...+....+++..|+++|++|+++|.=-.|.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n 42 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKAD 42 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccc
Confidence 35555 76555566666789999999999999999865554
No 286
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=23.50 E-value=5.9e+02 Score=23.53 Aligned_cols=39 Identities=18% Similarity=0.305 Sum_probs=31.2
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
..+.++++.|..|+-.+...+.+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 456799999998888887778888888778888777753
No 287
>PRK10824 glutaredoxin-4; Provisional
Probab=23.31 E-value=4.4e+02 Score=23.06 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=48.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
...|+|||..|........|-+.....|.+.|...-.+|.-. ..++.+.+..+....--.+|++
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~----------------d~~~~~~l~~~sg~~TVPQIFI 76 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ----------------NPDIRAELPKYANWPTFPQLWV 76 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC----------------CHHHHHHHHHHhCCCCCCeEEE
Confidence 356899999996544555665666666777774433334310 0234444333322111225999
Q ss_pred EEEchHHHHHHHHHhhcCC
Q 008093 238 IGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p~ 256 (578)
=|...||.--+.-+.+.++
T Consensus 77 ~G~~IGG~ddl~~l~~~G~ 95 (115)
T PRK10824 77 DGELVGGCDIVIEMYQRGE 95 (115)
T ss_pred CCEEEcChHHHHHHHHCCC
Confidence 9999999987766666554
No 288
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=23.10 E-value=1.4e+02 Score=24.69 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=21.8
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCC
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG 199 (578)
.++|+|++|++ |... ...+..|.+.||. +.++.|
T Consensus 60 ~~~~ivv~C~~--G~rs----~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAK--EGSS----QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCC--CCcH----HHHHHHHHHcCce--eEEeCC
Confidence 45688888875 2222 2456678889998 555554
No 289
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=23.00 E-value=1.3e+02 Score=32.69 Aligned_cols=39 Identities=13% Similarity=0.262 Sum_probs=32.8
Q ss_pred CCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 159 ~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
.+|.+|++-|..|...+.-...++..+.++|++|.+++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 457899999999888877778888888889999988853
No 290
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=22.71 E-value=87 Score=30.70 Aligned_cols=35 Identities=14% Similarity=0.396 Sum_probs=31.2
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
+|++-|++|+....+.+.+++.|.+.+++|+...-
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 67899999988888999999999999999987754
No 291
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=22.22 E-value=63 Score=34.41 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=35.1
Q ss_pred ccceEEEEeCCCCCCCCCCcchHH-------------------------HhcCCCEEEEEeCCCCccccccccccCcccH
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDE-------------------------CRANKNVVLATTWHGGHLAFFEGLTAAGMWW 410 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~-------------------------~~~~~~~~l~~~~~GGH~~~~eg~~~~~~w~ 410 (578)
.+++|+.+|..|-+|+.-...... .+...+..++.+.++||+...+. | ...
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dq--P--~~a 405 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQ--P--EAA 405 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHS--H--HHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhC--H--HHH
Confidence 389999999999999842111000 01225678899999999987762 3 235
Q ss_pred HHHHHHHHH
Q 008093 411 VRAVNEYLG 419 (578)
Q Consensus 411 ~~~v~eFL~ 419 (578)
.+.+..||+
T Consensus 406 ~~m~~~fl~ 414 (415)
T PF00450_consen 406 LQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 566666653
No 292
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=21.71 E-value=1.5e+02 Score=27.19 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=25.1
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeC
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~ 197 (578)
|.+..+-+|...+....+++..++++|++|+++|.
T Consensus 2 i~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~ 36 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDA 36 (179)
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 34444444544555567889999999999999976
No 293
>KOG3491 consensus Predicted membrane protein [Function unknown]
Probab=21.60 E-value=83 Score=23.92 Aligned_cols=22 Identities=36% Similarity=0.578 Sum_probs=17.9
Q ss_pred hhhhHHHHHHhcccchhhhHHHHHhh
Q 008093 540 MWLLAYVAIITTWPLVGSALRFIFGK 565 (578)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (578)
-|||++.-+|. .||++|=++|-
T Consensus 39 PwLlglFvFVV----cGSa~FqIIr~ 60 (65)
T KOG3491|consen 39 PWLLGLFVFVV----CGSALFQIIRT 60 (65)
T ss_pred hHHHHHHHHHh----hcHHHHHHHHH
Confidence 49999988875 69999988763
No 294
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=21.48 E-value=4.5e+02 Score=21.39 Aligned_cols=82 Identities=17% Similarity=0.236 Sum_probs=49.5
Q ss_pred CCCcEEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCCcEEE
Q 008093 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (578)
Q Consensus 158 ~~~PiVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 237 (578)
...|+|||..|..+.....|-....+.|.+.|...-.+|.... .++.+.+.......--..+++
T Consensus 6 ~~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~----------------~~~~~~l~~~~g~~tvP~vfi 69 (90)
T cd03028 6 KENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED----------------EEVRQGLKEYSNWPTFPQLYV 69 (90)
T ss_pred ccCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC----------------HHHHHHHHHHhCCCCCCEEEE
Confidence 3568999999987777777767777788888876666664310 123333322221111123666
Q ss_pred EEEchHHHHHHHHHhhcC
Q 008093 238 IGTSIGANILVKYLGEEG 255 (578)
Q Consensus 238 vGhSmGG~ial~ya~~~p 255 (578)
=|.-+||.--+.-+.+.+
T Consensus 70 ~g~~iGG~~~l~~l~~~g 87 (90)
T cd03028 70 NGELVGGCDIVKEMHESG 87 (90)
T ss_pred CCEEEeCHHHHHHHHHcC
Confidence 677788887776665544
No 295
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.39 E-value=1.9e+02 Score=26.88 Aligned_cols=44 Identities=20% Similarity=0.359 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEEchHHHHHHHHHhhcCCCCCccEEE
Q 008093 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (578)
Q Consensus 217 ~Dl~~~i~~l~~~~~~~~i~lvGhSmGG~ial~ya~~~p~~~~V~~~V 264 (578)
+++.+.++.++.+ ..+++++|-|..|.+.+.+++..++ .|..++
T Consensus 55 ~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~--~I~~vv 98 (160)
T PF08484_consen 55 AELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDND--LIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TT--TS--EE
T ss_pred HHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcc--eeEEEE
Confidence 4555555555554 4679999999999999999988766 465555
No 296
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=21.38 E-value=1.5e+02 Score=32.41 Aligned_cols=60 Identities=20% Similarity=0.065 Sum_probs=39.0
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHH-----------------------hcCC-CEEEEEeCCCCccccccccccCcccHH
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDEC-----------------------RANK-NVVLATTWHGGHLAFFEGLTAAGMWWV 411 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~-----------------------~~~~-~~~l~~~~~GGH~~~~eg~~~~~~w~~ 411 (578)
.+++|+.+|..|-+|+.-....... +... +..++++.++||+... .|. ...
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~---qP~--~al 421 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY---RPN--ETF 421 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCC---CHH--HHH
Confidence 4899999999999998642111000 1113 3788889999999842 243 366
Q ss_pred HHHHHHHHh
Q 008093 412 RAVNEYLGV 420 (578)
Q Consensus 412 ~~v~eFL~~ 420 (578)
+.+..|++.
T Consensus 422 ~m~~~Fi~~ 430 (433)
T PLN03016 422 IMFQRWISG 430 (433)
T ss_pred HHHHHHHcC
Confidence 777777753
No 297
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=21.37 E-value=1.3e+02 Score=24.41 Aligned_cols=44 Identities=18% Similarity=0.324 Sum_probs=34.0
Q ss_pred CCchHHHHHHHHHHHHHC---CCCcEEEEEEchHHHHHHHHHhhcCC
Q 008093 213 AGWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGEEGE 256 (578)
Q Consensus 213 ~~~~~Dl~~~i~~l~~~~---~~~~i~lvGhSmGG~ial~ya~~~p~ 256 (578)
.++...+.+.+++++.+- +..++.++|-|-|=.++.+.++..+.
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 366788999999998753 23579999999999999988887755
No 298
>TIGR03063 srtB_target sortase B cell surface sorting signal. Two different classes of sorting signal, both analogous to the sortase A signal LPXTG, may be recognized by the sortase SrtB. These are given as NXZTN and NPKXZ. Proteins sorted by this class of sortase are less common than the sortase A and LPXTG system. This model describes a number of cell surface protein C-terminal regions from Gram-positive bacteria that appear to be sortase B (SrtB) sorting signals.
Probab=21.17 E-value=45 Score=21.71 Aligned_cols=11 Identities=36% Similarity=0.473 Sum_probs=7.5
Q ss_pred chhhhHHHHHh
Q 008093 554 LVGSALRFIFG 564 (578)
Q Consensus 554 ~~~~~~~~~~~ 564 (578)
++||++|++.|
T Consensus 17 ~~~s~~~Li~k 27 (29)
T TIGR03063 17 FLGSGLFLIRK 27 (29)
T ss_pred HHHHHHHHhhc
Confidence 47888877743
No 299
>PLN02209 serine carboxypeptidase
Probab=21.17 E-value=1.5e+02 Score=32.45 Aligned_cols=59 Identities=20% Similarity=0.108 Sum_probs=38.7
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHH-----------------------hcCCC-EEEEEeCCCCccccccccccCcccHH
Q 008093 356 SIPLLCISSLDDPVCTVEAIPWDEC-----------------------RANKN-VVLATTWHGGHLAFFEGLTAAGMWWV 411 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~~~~~~-----------------------~~~~~-~~l~~~~~GGH~~~~eg~~~~~~w~~ 411 (578)
.+++|+.+|..|-+|+.-....... +...+ ..++.+.++||+... .|. ...
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~---qP~--~al 425 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEY---LPE--ESS 425 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCc---CHH--HHH
Confidence 4899999999999998642111000 11244 788889999998832 243 356
Q ss_pred HHHHHHHH
Q 008093 412 RAVNEYLG 419 (578)
Q Consensus 412 ~~v~eFL~ 419 (578)
+.+..|+.
T Consensus 426 ~m~~~fi~ 433 (437)
T PLN02209 426 IMFQRWIS 433 (437)
T ss_pred HHHHHHHc
Confidence 67777764
No 300
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=21.01 E-value=1.2e+02 Score=33.39 Aligned_cols=60 Identities=15% Similarity=0.345 Sum_probs=39.9
Q ss_pred ccceEEEEeCCCCCCCCCCc-------chH--------------HH--------hcCC-----CEEEEEeCCCCcccccc
Q 008093 356 SIPLLCISSLDDPVCTVEAI-------PWD--------------EC--------RANK-----NVVLATTWHGGHLAFFE 401 (578)
Q Consensus 356 ~vPvLiI~g~dDpivp~~~~-------~~~--------------~~--------~~~~-----~~~l~~~~~GGH~~~~e 401 (578)
.+++|+.+|..|-+|+.... .+. .. +... +..++.+.++||+...+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 58999999999999886311 100 00 0112 67788888999998877
Q ss_pred ccccCcccHHHHHHHHHH
Q 008093 402 GLTAAGMWWVRAVNEYLG 419 (578)
Q Consensus 402 g~~~~~~w~~~~v~eFL~ 419 (578)
. |. ...+.+.+|+.
T Consensus 444 ~--P~--~~~~~i~~fl~ 457 (462)
T PTZ00472 444 Q--PA--VALTMINRFLR 457 (462)
T ss_pred H--HH--HHHHHHHHHHc
Confidence 2 33 36677777765
No 301
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=20.63 E-value=46 Score=30.88 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=27.1
Q ss_pred eCCCCCCCCCCCCCCCCCCchHHHHHHH----HHHHHHCC----CCcEEEEEEchHHH
Q 008093 196 NHRGLGGVSITSDCFYNAGWTEDAREVI----GYLHHEYP----KAPLFAIGTSIGAN 245 (578)
Q Consensus 196 D~RG~G~S~~~~~~~~~~~~~~Dl~~~i----~~l~~~~~----~~~i~lvGhSmGG~ 245 (578)
-.-|||..... ...+.....+.+...+ +.++++++ ..+|.++|.||+..
T Consensus 60 ~lVGHG~~~~~-~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFN-NQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTS-SSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCC-CceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34577765222 2222223347788778 77776652 34799999999887
No 302
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=20.55 E-value=1.6e+02 Score=28.72 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=29.3
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCC
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G 201 (578)
+|.+..+-+|...+....+++..++++|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4555555555555555678899999999999999985544
No 303
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=20.53 E-value=2.9e+02 Score=28.47 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=44.8
Q ss_pred EEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC----------CCCC-CCCCchHHHHHHHHHHHHHCC
Q 008093 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT----------SDCF-YNAGWTEDAREVIGYLHHEYP 231 (578)
Q Consensus 163 VVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~----------~~~~-~~~~~~~Dl~~~i~~l~~~~~ 231 (578)
+-++-|.+|... .| +++.|.++||.|..+..|..-.+... .+++ ...+...|...+++.+....|
T Consensus 4 ~ALITGITGQDG-sY---La~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 4 VALITGITGQDG-SY---LAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred eEEEecccCCch-HH---HHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 568899987444 56 78899999999999998843322221 0001 122344566667776666556
Q ss_pred CCcEEEEEE
Q 008093 232 KAPLFAIGT 240 (578)
Q Consensus 232 ~~~i~lvGh 240 (578)
+.-..+.+.
T Consensus 80 dEIYNLaAQ 88 (345)
T COG1089 80 DEIYNLAAQ 88 (345)
T ss_pred hhheecccc
Confidence 544444333
No 304
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=20.48 E-value=8.1e+02 Score=23.94 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=28.1
Q ss_pred EEEEECCCCCCCccHHHHHHHHHHHhCCceEEEEeCCCC
Q 008093 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (578)
Q Consensus 162 iVVllHGl~G~s~~~yi~~l~~~l~~~Gy~Vvv~D~RG~ 200 (578)
++++.+++.++....++..++..|.+.|+.|.++.....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~ 40 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDE 40 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCC
Confidence 466777764444555668899999899999988876543
No 305
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=20.35 E-value=1.4e+02 Score=29.05 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=30.3
Q ss_pred EECCCCCCCccHHHHHHHHHHH-hCCceEEEEeCCC
Q 008093 165 VIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNHRG 199 (578)
Q Consensus 165 llHGl~G~s~~~yi~~l~~~l~-~~Gy~Vvv~D~RG 199 (578)
.+=|.+|+-.+..+..+++.+. +.|+.++++|.=|
T Consensus 27 ~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 27 AIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4568888888888999999999 8999999999944
No 306
>PF06624 RAMP4: Ribosome associated membrane protein RAMP4; InterPro: IPR010580 This entry contains Serp1/Ramp4, which has been shown to interacts with target proteins during their translocation into the lumen of the endoplasmic reticulum. It has also been shown to protect unfolded target proteins against degradation during ER stress. It may facilitate glycosylation of target proteins after termination of ER stress and may modulate the use of N-glycosylation sites on target proteins [, ].
Probab=20.33 E-value=60 Score=25.27 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=20.1
Q ss_pred cccchhhhHHHHHHhcccchhhhHHHHHh
Q 008093 536 NKRSMWLLAYVAIITTWPLVGSALRFIFG 564 (578)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (578)
.--+-|||+++.+| .+||++|=++|
T Consensus 35 ~pVgp~~L~l~iFV----V~Gs~ifqiir 59 (63)
T PF06624_consen 35 YPVGPWLLGLFIFV----VCGSAIFQIIR 59 (63)
T ss_pred CCcCHHHHhhhhee----eEcHHHHHHHH
Confidence 44578999999988 58999987765
Done!