BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008095
(578 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SKQ|A Chain A, Mdm38 Is A 14-3-3-Like Receptor And Associates With The
Protein Synthesis Machinery At The Inner Mitochondrial
Membrane
Length = 249
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 132/226 (58%), Gaps = 18/226 (7%)
Query: 106 KLFPNMLPSTFQDKMREEEALKRRLI-ARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAE 164
KLFPN+LPST++ ++++A + +LI R + ++FL +T++E N + + AE
Sbjct: 1 KLFPNLLPSTYESG-KDKQAKRNKLIEIRKKTSEFLHETLEE-----SNLITYNTIENAE 54
Query: 165 DLDEFMNKVRTGAGV--------SNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISP 216
+F+N R +DEI A A++F ++ LDN+SRP+L M K+M + P
Sbjct: 55 KKQKFLNFFRKLYSAKEGKIMTFQHDEISAIAQMFKNDSVLDNLSRPQLAAMSKFMSLRP 114
Query: 217 FGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQ 275
FG D LRY +R +L++I NDDK I EGVESLS+ EL QAC RG+ +S E++
Sbjct: 115 FGNDNMLRYQIRSKLKDIMNDDKTIDYEGVESLSQEELYQACVSRGMKAYGVSKEDLVDN 174
Query: 276 LRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDE 321
L+ WL+L L +PS L++LS F+ G P+E S L ++
Sbjct: 175 LKVWLELRLRQKIPSVLMVLSSTFTFGG--LPKENYSKAFSPLAEK 218
>pdb|1QB4|A Chain A, Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruvate
Carboxylase
pdb|1JQN|A Chain A, Crystal Structure Of E.Coli Phosphoenolpyruvate
Carboxylase In Complex With Mn2+ And Dcdp
pdb|1FIY|A Chain A, Three-Dimensional Structure Of Phosphoenolpyruvate
Carboxylase From Escherichia Coli At 2.8 A Resolution
Length = 883
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 400
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 371 TMMARKMKDTDSEE 384
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 400
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 371 TMMARKMKDTDSEE 384
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 307 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 366
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 367 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 337 TMMARKMKDTDSEE 350
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 307 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 366
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 367 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 337 TMMARKMKDTDSEE 350
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 304 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 363
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 364 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 410
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 334 TMMARKMKDTDSEE 347
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 342 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 401
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 402 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 372 TMMARKMKDTDSEE 385
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 332 GQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGY 391
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 392 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D +G I E +
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Query: 561 VKLASQTEDTETAE 574
+ +A + +DT++ E
Sbjct: 362 IMMARKMKDTDSEE 375
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK-IGDRWRLLDRDYDGKVTAEEVASAAMY 530
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 47 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTN 106
Query: 531 LKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I + D +G++ E+ V++ +
Sbjct: 107 LGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMT 141
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 66 TMMARKMKDTDSEE 79
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + +++ D D++ I + +R+ D+D +G
Sbjct: 340 GQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 399
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 400 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D +G I E +
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 370 TMMARKMKDTDSEE 383
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
++L D+D D K+TAEE+ + L K+ I E++ + KD GK
Sbjct: 20 FQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I + D +G++ E+ V++ +
Sbjct: 111 NLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMT 146
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL-ASQ 566
+ L D+D DG +T EE+A+ L +E +Q++I+ + D G I ++ + L A +
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 567 TEDTETAE 574
+DT+ E
Sbjct: 76 VKDTDAEE 83
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYL 531
+IN VDA L + +++ D + +I + +R+ D+D +G ++A E+ L
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL 110
Query: 532 KDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
+ L E + E+I D +G++ E+ V + +
Sbjct: 111 GEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 144
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ + + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L E + E+I D +G+I E+ VK+
Sbjct: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 498 DDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILV 557
DD ++ + + L D+D DG +T +E+ + L + +Q++I + D G I
Sbjct: 7 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 558 EDIVKL-ASQTEDTETAE 574
+ + L A + +DT++ E
Sbjct: 67 PEFLNLMARKMKDTDSEE 84
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 109 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 68 TMMARKMKDTDSEE 81
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 112 NLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 111 NLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 48 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 107
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 108 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 143
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 67 TMMARKMKDTDSEE 80
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 109 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 68 TMMARKMKDTDSEE 81
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 47 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 106
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 107 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 142
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 66 TMMARKMKDTDSEE 79
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 53 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 112
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 113 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 148
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 72 TMMARKMKDTDSEE 85
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 471 GEDVDEKVSSALINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGK 518
G++ E +IN VDA L + + + D D++ I + +R+ D+D +G
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGY 400
Query: 519 VTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
++A E+ L + L E + E+I D +G++ E+ V++ +
Sbjct: 401 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 561 VKLASQTEDTETAE 574
+A +DT++ E
Sbjct: 371 TMMARWMKDTDSEE 384
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 109 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 68 TMMARKMKDTDSEE 81
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 50 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 109
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 110 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 145
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 69 TMMARKMKDTDSEE 82
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 55 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 114
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 115 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 150
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 74 TMMARKMKDTDSEE 87
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 57 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 116
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 117 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 152
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 76 TMMARKMKDTDSEE 89
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL-ASQ 566
+ L D+D DG +T EE+A+ L +E +Q++I+ + D G I ++ + L A +
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 567 TEDT 570
+DT
Sbjct: 76 VKDT 79
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V++ +
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D +G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDA--KIGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D+ K+ + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L E + E+I D +G++ E+ V++
Sbjct: 111 NLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIV 561
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I + +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 562 KL-ASQTEDTETAE 574
L A + +DT++ E
Sbjct: 70 NLMARKMKDTDSEE 83
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLASQ 566
+ L D+D DG +T EE+A+ L +E +Q++I+ + D G I ++ + L ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ + + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L E + E+I D +G+I ++ VK+
Sbjct: 112 NLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V + +
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V + +
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLASQ 566
+R D+D DG +T +E+ A L L +E + +I D++G++ E+ ++ +Q
Sbjct: 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V + +
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 502 AKIGDR---------WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDRE 552
AK+G+R +RL D D GK++ + + A L + + E +QE+I +D +
Sbjct: 72 AKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGD 131
Query: 553 GKILVEDIVKLASQT 567
G++ E+ ++ +T
Sbjct: 132 GEVNEEEFFRIMKKT 146
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
+ L D D G + A+E+ A L KE I+++IA++ KD G I E+ +++ +
Sbjct: 14 FDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMT 71
>pdb|1WX0|A Chain A, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|B Chain B, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|C Chain C, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|D Chain D, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|E Chain E, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|F Chain F, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|G Chain G, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|H Chain H, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|I Chain I, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|J Chain J, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
Length = 223
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 268 SVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVG 327
S+EE+R+ + W LS V ++ ++++AF+ G+ EEA A L ++ + V V
Sbjct: 9 SLEEIRE-IAAWGVLS---GVTTNPTLVAKAFAAKGEALTEEAFAAHLRAICETVGGPVS 64
Query: 328 --VTALPSEDSISERRR 342
VTAL +E ++E RR
Sbjct: 65 AEVTALEAEAMVAEGRR 81
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V + +
Sbjct: 111 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 441 EFVQMMT 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 440 EFVQMMT 446
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D +G I E +
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 561 VKLASQTEDTETAE 574
+A + + T++ E
Sbjct: 370 TMMARKMKYTDSEE 383
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 440 EFVQMMT 446
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D +G I E +
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 561 VKLASQTEDTETAE 574
+A + + T++ E
Sbjct: 370 TMMARKMKYTDSEE 383
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 441 EFVQMMT 447
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ I + +R+ D+D +G ++A E+
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKLAS 565
L + L E + E+I D +G++ E+ V + +
Sbjct: 112 NLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMT 147
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 488 AMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANL 547
M+ + K+ D+ + +I + +R+ D+D +G V+A E+ L + L E + E+I
Sbjct: 70 GMMARKMKDTDN-EEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAA 128
Query: 548 SKDREGKILVEDIVKL 563
D +G++ E+ V++
Sbjct: 129 DTDGDGQVNYEEFVRV 144
>pdb|3IM6|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 Mutant
V186m
Length = 217
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 469 DAGEDVDE----KVSSALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEV 524
DAGE DE + ++ + A + K ++++ G+R L+ + K ++
Sbjct: 3 DAGEGEDEIQFLRTDDEVVLQCTATIHKEQQKLCLAAEGFGNRLCFLESTSNSKNVPPDL 62
Query: 525 ASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
+ L+ +L +QE++AN + EG++ VE
Sbjct: 63 SICTFVLEQSLSVRALQEMLANTVEKSEGQVDVE 96
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + ++ + +R+ D+D +G ++A E+ L + L E + E+I D +G+I E
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 559 DIVKL 563
+ VK+
Sbjct: 61 EFVKV 65
>pdb|3IM5|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 (Residues
1-217)
pdb|3IM5|B Chain B, Crystal Structure Of Mouse Ryanodine Receptor 2 (Residues
1-217)
Length = 217
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 469 DAGEDVDE----KVSSALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEV 524
DAGE DE + ++ + A + K ++++ G+R L+ + K ++
Sbjct: 3 DAGEGEDEIQFLRTDDEVVLQCTATIHKEQQKLCLAAEGFGNRLCFLESTSNSKNVPPDL 62
Query: 525 ASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
+ L+ +L +QE++AN + EG++ VE
Sbjct: 63 SICTFVLEQSLSVRALQEMLANTVEKSEGQVDVE 96
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + ++ + +++ DRD DG ++ E+ + L + + E I E+I D +G I E
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
Query: 559 DIVKLASQ 566
+ V + SQ
Sbjct: 140 EFVWMISQ 147
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ + + +R+ D+D +G ++A E+
Sbjct: 48 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 107
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L E + E+I D +G++ E+ V++
Sbjct: 108 NLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIV 561
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I + +
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 562 KL-ASQTEDTETAE 574
L A + +DT++ E
Sbjct: 67 NLMARKMKDTDSEE 80
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 62 EFVQMMT 68
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 482 LINRVDA----------MLQKLEKEIDDVDAK--IGDRWRLLDRDYDGKVTAEEVASAAM 529
+IN VDA L + +++ D D++ + + +R+ D+D +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 530 YLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L E + E+I D +G++ E+ V++
Sbjct: 111 NLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIV 561
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I + +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 562 KL-ASQTEDTETAE 574
L A + +DT++ E
Sbjct: 70 NLMARKMKDTDSEE 83
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 559 DIVKL 563
+ V++
Sbjct: 62 EFVQM 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A ++ L + L E + E+I D +G++ E
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 559 DIVKLAS 565
D V++ +
Sbjct: 64 DFVQMMT 70
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 65 EFVQMMT 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 63 EFVQMMT 69
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
+R+ DR+ DG + AEE+A + + E I+ L+ + K+ +G+I ++ +K+
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 66 EFVQMMT 72
>pdb|1U5T|A Chain A, Structure Of The Escrt-Ii Endosomal Trafficking Complex
pdb|1W7P|A Chain A, The Crystal Structure Of Endosomal Complex Escrt-Ii
(Vps22VPS25VPS36)
Length = 233
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 150 EVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMC 209
E+++ + D+ KT L++ ++R V + ++ FAK N EL R + ++MC
Sbjct: 11 ELKDGKYNDVNKTI--LEKQSVELRDQLMVFQERLVEFAKKHNSELQASPEFRSKFMHMC 68
Query: 210 KYMGISP---FGTDAYL 223
+GI P F D +L
Sbjct: 69 SSIGIDPLSLFDRDKHL 85
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
+R+ DR+ DG + AEE+A + + E I+ L+ + K+ +G+I ++ +K+
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 488 AMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANL 547
M QK+ ++ D +I ++L D D GK++ + + A L + L E +QE+I
Sbjct: 9 VMTQKMSEK--DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 66
Query: 548 SKDREGKILVEDIVKLASQT 567
+D +G++ ++ +++ +T
Sbjct: 67 DRDGDGEVSEQEFLRIMKKT 86
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
+I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E+ V+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 563 LAS 565
+ +
Sbjct: 63 MMT 65
>pdb|3IM7|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 N-Terminal
Domain (1-217) Disease Mutant A77v
Length = 217
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 469 DAGEDVDE----KVSSALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEV 524
DAGE DE + ++ + A + K ++++ G+R L+ + K ++
Sbjct: 3 DAGEGEDEIQFLRTDDEVVLQCTATIHKEQQKLCLAAEGFGNRLCFLESTSNSKNVPPDL 62
Query: 525 ASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
+ L+ +L +QE++AN + EG++ VE
Sbjct: 63 SICTFVLEQSLSVRVLQEMLANTVEKSEGQVDVE 96
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 70 TMMARKMKDTDSEE 83
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 37/66 (56%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I ++ ++
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 563 LASQTE 568
E
Sbjct: 156 FMKGVE 161
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 499 DVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D + +I + +R+ D+D +G ++A E+ L + L E + E+I D +G++ E
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 559 DIVKLAS 565
+ V++ +
Sbjct: 86 EFVQMMT 92
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 34/60 (56%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLASQT 567
++L D D GK++ + + A L + L E +QE+I +D +G++ ++ +++ +T
Sbjct: 17 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKT 76
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 37/66 (56%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I ++ ++
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 563 LASQTE 568
E
Sbjct: 76 FMKGVE 81
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 32/53 (60%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 32/53 (60%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 37/66 (56%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I ++ ++
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 563 LASQTE 568
E
Sbjct: 66 FMKGVE 71
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 561 VKLASQTEDTETAE 574
+A + +DT++ E
Sbjct: 71 TMMARKMKDTDSEE 84
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 36/61 (59%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + EE+ + + +E I++L+ + K+ +G+I ++ +K
Sbjct: 97 ELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 563 L 563
+
Sbjct: 157 M 157
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 493 LEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDRE 552
++ E ++ +I LLD D G + E ++A+ L +E ++ KD
Sbjct: 372 IQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGS 431
Query: 553 GKILVEDIVKLASQTEDT 570
GKI +++ KL SQ + +
Sbjct: 432 GKISTKELFKLFSQADSS 449
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 37/66 (56%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I ++ ++
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 563 LASQTE 568
E
Sbjct: 68 FMKGVE 73
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
K+ ++ D+D +GK++ +E+AS ++ D L+ + +E+I+ + + +G + E+ K
Sbjct: 144 KLESAFQKFDQDGNGKISVDELAS--VFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 201
Query: 563 L 563
+
Sbjct: 202 M 202
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 33/60 (55%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKLASQT 567
++L D D GK++ + + A L + L E +QE I +D +G++ ++ +++ +T
Sbjct: 110 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKKT 169
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 482 LINRVDA--------------MLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASA 527
+IN VDA M +K++++ D + ++ + +++ DRD +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLSLMARKMKEQ--DSEEELIEAFKVFDRDGNGLISAAELRHV 108
Query: 528 AMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L + + E+I D +G I E+ V++
Sbjct: 109 MTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 482 LINRVDA--------------MLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTAEEVASA 527
+IN VDA M +K++++ D + ++ + +++ DRD +G ++A E+
Sbjct: 51 MINEVDADGNGTIDFPEFLSLMARKMKEQ--DSEEELIEAFKVFDRDGNGLISAAELRHV 108
Query: 528 AMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
L + L + + E+I D +G I E+ V++
Sbjct: 109 MTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1YA9|A Chain A, Crystal Structure Of The 22kda N-Terminal Fragment Of
Mouse Apolipoprotein E
Length = 181
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 112 LPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSR---GGDIKKTAEDLDE 168
L + +D M E +A K+ L ++ ++T + KEVQ ++ G D++ L +
Sbjct: 51 LTALMEDTMTEVKAYKKELEEQL--GPVAEETRARLGKEVQAAQARLGADMEDLRNRLGQ 108
Query: 169 FMNKVRTGAGVSNDEILA 186
+ N+V T G S +EI A
Sbjct: 109 YRNEVHTMLGQSTEEIRA 126
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKD 533
A++ W L D D DGK+TAEE AM+L D
Sbjct: 48 AQLASIWNLSDIDQDGKLTAEEFI-LAMHLID 78
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 498 DDVDAKIGDR--WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
D D KIG + ++L+D D DGK+T EEV S + K ++K Q + A+ + D G I
Sbjct: 69 DLSDDKIGLKVLYKLMDVDGDGKLTKEEVTS--FFKKHGIEKVAEQVMKADANGD--GYI 124
Query: 556 LVEDIVKLA 564
+E+ ++ +
Sbjct: 125 TLEEFLEFS 133
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 498 DDVDAKIGDR--WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
D D KIG + ++L+D D DGK+T EEV S + K ++K Q + A+ + D G I
Sbjct: 69 DLSDDKIGLKVLYKLMDVDGDGKLTKEEVTS--FFKKHGIEKVAEQVMKADANGD--GYI 124
Query: 556 LVEDIVKLA 564
+E+ ++ +
Sbjct: 125 TLEEFLEFS 133
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 5.7, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 501 DAKIGDRWRLLDRDYDGKVTAEEVASA----AMYLKDTLDKEGIQELIANLSKDREGKIL 556
DA++ + + +LD+D G + EE+ + + +D D E + L+A D +GKI
Sbjct: 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTE-TKALLAAGDSDHDGKIG 98
Query: 557 VEDIVKLASQ 566
++ K+ +Q
Sbjct: 99 ADEFAKMVAQ 108
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D +G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 561 VKLASQTEDT 570
+A + +DT
Sbjct: 70 TMMARKMKDT 79
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 37/66 (56%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + EE+ +T+ ++ I+EL+ + K+ +G+I ++ ++
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 563 LASQTE 568
E
Sbjct: 71 FMKGVE 76
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
K+ ++ D+D +GK++ +E+AS ++ D L+ + +E+I+ + + +G + E+ K
Sbjct: 427 KLESAFQKFDQDGNGKISVDELAS--VFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Query: 563 L 563
+
Sbjct: 485 M 485
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 34/58 (58%)
Query: 506 DRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
D +R+ D++ DG + EE+ + + +E I++L+ + K+ +G+I ++ +K+
Sbjct: 100 DCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDTE 571
+A + +DT+
Sbjct: 70 TMMARKMKDTD 80
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 501 DAKIGDR--WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVE 558
D KIG + ++L+D D DGK+T EEV S + K ++K + E + + +G I +E
Sbjct: 2 DDKIGLKVLYKLMDVDGDGKLTKEEVTS--FFKKHGIEK--VAEQVMKADANGDGYITLE 57
Query: 559 DIVKLA 564
+ ++ +
Sbjct: 58 EFLEFS 63
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI-LVEDI 560
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I E +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 561 VKLASQTEDT 570
+A + +DT
Sbjct: 70 TMMARKMKDT 79
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 506 DRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
D +R LD++ +G + E+ + L D L ++EL+ +S +G I E V +
Sbjct: 80 DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDM 137
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 495 KEIDDVDAKIGDR--WRLLDRDYDGKVTAEEVAS 526
KE D D K+G + ++L+D D DGK+T EEV +
Sbjct: 66 KEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTT 99
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
+++ DRD +G ++A E+ L + L + + E+I D +G I E+ V++
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELI--ANLSKDREGKILVEDIVK 562
++ DR+ G ++ E+ L + L E + E+I +L +D EG + ED VK
Sbjct: 88 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 144
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELI--ANLSKDREGKILVEDIVK 562
++ DR+ G ++ E+ L + L E + E+I +L +D EG + ED VK
Sbjct: 87 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELI--ANLSKDREGKILVEDIVK 562
++ DR+ G ++ E+ L + L E + E+I +L +D EG + ED VK
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELI--ANLSKDREGKILVEDIVK 562
++ DR+ G ++ E+ L + L E + E+I +L +D EG + ED VK
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELI--ANLSKDREGKILVEDIVK 562
++ DR+ G ++ E+ L + L E + E+I +L +D EG + ED VK
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 502 AKIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKI 555
A+ + + L D+D DG +T +E+ + L + +Q++I + D G I
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 33/56 (58%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
+R+ D++ DG + EE+ + + +E I++L+ + K+ +G+I ++ +K+
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|3QIS|A Chain A, Recognition Of The F&h Motif By The Lowe Syndrome Protein
Ocrl
Length = 366
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 254 LRQACRDRGLLGLLSVEEMRQQLRDWLDLSL-------NHSVPSSLLILSRAFSVSGKVR 306
+ AC L ++E QQ+ D LD S+ NHSV +LLI A + V
Sbjct: 211 FKYACHQEDLFQTPGMQEELQQIIDCLDTSIPETIPGSNHSVAEALLIFLEA--LPEPVI 268
Query: 307 PEEAVQATLSSLPDEVVDTVGVTALP 332
E Q L S D + ++ LP
Sbjct: 269 CYELYQRCLDSAYDPRICRQVISQLP 294
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 33/56 (58%)
Query: 508 WRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVKL 563
+R+ D++ DG + EE+ + + +E I++L+ + K+ +G+I ++ +K+
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 154
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/66 (21%), Positives = 37/66 (56%)
Query: 503 KIGDRWRLLDRDYDGKVTAEEVASAAMYLKDTLDKEGIQELIANLSKDREGKILVEDIVK 562
++ D +R+ D++ DG + +E+ +T+ ++ I+EL+ + K+ +G+I ++ ++
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 563 LASQTE 568
E
Sbjct: 67 FMKGVE 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,765,275
Number of Sequences: 62578
Number of extensions: 513105
Number of successful extensions: 2001
Number of sequences better than 100.0: 154
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1778
Number of HSP's gapped (non-prelim): 221
length of query: 578
length of database: 14,973,337
effective HSP length: 104
effective length of query: 474
effective length of database: 8,465,225
effective search space: 4012516650
effective search space used: 4012516650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)