Query 008096
Match_columns 577
No_of_seqs 142 out of 2044
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 19:25:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008096.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008096hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3.7E-44 7.9E-49 388.9 40.2 533 12-557 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.1E-38 2.4E-43 329.6 29.9 461 13-551 17-490 (498)
3 PRK10207 dipeptide/tripeptide 100.0 2.5E-35 5.4E-40 319.6 39.4 462 11-553 8-481 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 7.3E-35 1.6E-39 315.6 37.1 454 11-551 4-471 (475)
5 PRK15462 dipeptide/tripeptide 100.0 6.5E-34 1.4E-38 304.6 37.9 454 15-547 7-477 (493)
6 PRK09584 tppB putative tripept 100.0 6.1E-33 1.3E-37 302.3 38.8 459 12-553 16-484 (500)
7 PRK03545 putative arabinose tr 99.9 4.2E-25 9.1E-30 233.7 32.3 373 15-549 7-381 (390)
8 PRK11551 putative 3-hydroxyphe 99.9 5.4E-25 1.2E-29 233.9 32.1 361 10-505 8-369 (406)
9 TIGR01299 synapt_SV2 synaptic 99.9 3.3E-25 7.2E-30 248.2 30.8 157 36-221 185-354 (742)
10 PRK12382 putative transporter; 99.9 1.4E-24 3.1E-29 229.7 32.8 374 17-547 15-388 (392)
11 PRK05122 major facilitator sup 99.9 2E-24 4.4E-29 229.1 33.4 375 15-547 13-388 (399)
12 PRK10489 enterobactin exporter 99.9 4.7E-25 1E-29 235.5 28.3 391 19-560 19-411 (417)
13 TIGR00887 2A0109 phosphate:H+ 99.9 4.2E-25 9E-30 241.6 27.7 183 14-219 13-222 (502)
14 PRK10054 putative transporter; 99.9 1.1E-24 2.3E-29 231.1 28.6 355 15-507 5-360 (395)
15 PRK10504 putative transporter; 99.9 3.5E-24 7.6E-29 232.4 33.1 179 16-224 9-187 (471)
16 PRK11646 multidrug resistance 99.9 5.8E-24 1.3E-28 225.8 33.6 348 20-507 13-360 (400)
17 PRK10077 xylE D-xylose transpo 99.9 5.4E-25 1.2E-29 239.1 26.1 155 49-220 51-213 (479)
18 PRK11663 regulatory protein Uh 99.9 4.9E-24 1.1E-28 228.9 30.6 160 25-214 31-190 (434)
19 TIGR00903 2A0129 major facilit 99.9 5.3E-24 1.2E-28 223.2 29.7 159 35-223 8-166 (368)
20 PRK10642 proline/glycine betai 99.9 6E-24 1.3E-28 231.8 28.9 176 16-213 15-204 (490)
21 PRK09874 drug efflux system pr 99.9 1.4E-23 2.9E-28 223.0 30.1 378 19-549 16-399 (408)
22 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1E-23 2.2E-28 224.8 29.2 181 13-223 4-190 (412)
23 TIGR00926 2A1704 Peptide:H+ sy 99.9 3E-24 6.6E-29 237.6 25.6 335 31-423 1-342 (654)
24 PRK14995 methyl viologen resis 99.9 1.2E-23 2.6E-28 229.6 29.6 400 16-506 5-413 (495)
25 PRK09705 cynX putative cyanate 99.9 1.7E-23 3.7E-28 221.8 29.8 358 34-552 26-385 (393)
26 PRK10213 nepI ribonucleoside t 99.9 4.6E-23 9.9E-28 218.6 32.3 177 10-216 13-189 (394)
27 TIGR00891 2A0112 putative sial 99.9 2E-23 4.4E-28 220.7 28.8 175 11-215 6-182 (405)
28 TIGR00900 2A0121 H+ Antiporter 99.9 2.4E-23 5.1E-28 216.7 28.7 358 21-506 3-363 (365)
29 TIGR00899 2A0120 sugar efflux 99.9 6.7E-23 1.4E-27 214.9 31.2 169 23-220 3-174 (375)
30 COG2814 AraJ Arabinose efflux 99.9 1.1E-22 2.4E-27 209.0 31.9 183 11-223 7-189 (394)
31 PRK09556 uhpT sugar phosphate 99.9 8.6E-24 1.9E-28 229.2 25.1 178 19-220 27-210 (467)
32 TIGR00890 2A0111 Oxalate/Forma 99.9 1.2E-23 2.6E-28 219.8 25.1 338 33-506 19-357 (377)
33 TIGR00893 2A0114 d-galactonate 99.9 3.7E-23 8E-28 217.0 28.8 158 36-222 12-169 (399)
34 PRK10406 alpha-ketoglutarate t 99.9 6.7E-23 1.5E-27 220.0 30.9 168 25-214 30-211 (432)
35 TIGR00894 2A0114euk Na(+)-depe 99.9 3.9E-23 8.4E-28 223.9 29.3 149 47-222 70-219 (465)
36 PF07690 MFS_1: Major Facilita 99.9 7.7E-24 1.7E-28 219.5 22.8 170 23-221 2-171 (352)
37 PRK12307 putative sialic acid 99.9 3.7E-23 8.1E-28 221.2 28.7 168 13-210 14-181 (426)
38 TIGR00879 SP MFS transporter, 99.9 2.2E-23 4.7E-28 224.8 27.0 145 50-220 68-215 (481)
39 PRK11273 glpT sn-glycerol-3-ph 99.9 9.4E-23 2E-27 220.1 31.1 157 38-220 49-206 (452)
40 PRK15402 multidrug efflux syst 99.9 1.3E-22 2.8E-27 215.9 30.3 176 15-220 8-186 (406)
41 PLN00028 nitrate transmembrane 99.9 8.4E-23 1.8E-27 221.8 28.9 177 13-220 32-217 (476)
42 TIGR00711 efflux_EmrB drug res 99.9 8.7E-23 1.9E-27 222.0 28.1 394 23-505 8-409 (485)
43 TIGR00892 2A0113 monocarboxyla 99.9 3.9E-23 8.4E-28 223.2 25.1 151 42-222 43-194 (455)
44 PRK03699 putative transporter; 99.9 3.6E-22 7.8E-27 211.7 31.7 174 14-217 4-178 (394)
45 KOG2532 Permease of the major 99.9 3.5E-23 7.5E-28 221.1 23.8 376 47-548 67-447 (466)
46 PRK10091 MFS transport protein 99.9 4.3E-22 9.4E-27 210.2 31.7 174 17-220 3-176 (382)
47 PRK03893 putative sialic acid 99.9 1.2E-22 2.6E-27 221.7 28.3 169 13-211 16-184 (496)
48 TIGR00898 2A0119 cation transp 99.9 1E-22 2.2E-27 223.0 27.5 147 42-220 113-262 (505)
49 COG2271 UhpC Sugar phosphate p 99.9 3.7E-23 7.9E-28 209.8 21.5 411 11-553 19-439 (448)
50 cd06174 MFS The Major Facilita 99.9 3.7E-22 8.1E-27 206.0 29.0 347 21-545 3-349 (352)
51 PRK15011 sugar efflux transpor 99.9 8.7E-22 1.9E-26 208.7 32.2 180 16-223 14-195 (393)
52 TIGR00895 2A0115 benzoate tran 99.9 3.4E-22 7.4E-27 210.5 28.3 178 13-220 13-190 (398)
53 TIGR00710 efflux_Bcr_CflA drug 99.9 8.4E-22 1.8E-26 207.2 31.1 178 15-222 3-180 (385)
54 PRK09952 shikimate transporter 99.9 1.1E-21 2.4E-26 210.8 32.6 179 13-213 18-211 (438)
55 KOG1330 Sugar transporter/spin 99.9 7.7E-24 1.7E-28 216.6 14.7 182 13-224 29-211 (493)
56 PRK15403 multidrug efflux syst 99.9 2.5E-21 5.4E-26 206.5 33.2 162 32-223 31-192 (413)
57 TIGR00897 2A0118 polyol permea 99.9 3.9E-21 8.5E-26 204.3 33.8 174 11-210 7-181 (402)
58 PRK11652 emrD multidrug resist 99.9 1.7E-21 3.7E-26 206.4 30.8 176 12-217 3-178 (394)
59 PRK03633 putative MFS family t 99.9 2.2E-21 4.8E-26 204.7 30.8 156 16-201 5-160 (381)
60 PRK09528 lacY galactoside perm 99.9 8.9E-22 1.9E-26 210.4 27.8 392 17-549 10-404 (420)
61 PRK11195 lysophospholipid tran 99.9 4.3E-21 9.3E-26 203.4 31.9 165 18-216 4-168 (393)
62 TIGR00712 glpT glycerol-3-phos 99.9 7.5E-22 1.6E-26 212.2 26.2 159 39-223 48-207 (438)
63 KOG0254 Predicted transporter 99.9 2.5E-21 5.5E-26 212.2 29.5 420 35-562 64-497 (513)
64 KOG0569 Permease of the major 99.9 1.4E-21 3E-26 206.7 25.6 397 55-560 62-466 (485)
65 PRK11043 putative transporter; 99.9 1.1E-20 2.3E-25 200.7 32.3 148 44-220 32-179 (401)
66 TIGR00881 2A0104 phosphoglycer 99.9 1.4E-21 3.1E-26 204.2 24.6 154 38-220 15-169 (379)
67 PRK15075 citrate-proton sympor 99.9 9.6E-21 2.1E-25 203.4 31.1 172 16-209 14-199 (434)
68 PRK10473 multidrug efflux syst 99.9 2E-20 4.2E-25 198.1 31.7 170 21-220 7-176 (392)
69 TIGR00902 2A0127 phenyl propri 99.9 1.5E-20 3.3E-25 198.4 30.7 343 21-507 8-356 (382)
70 PRK11102 bicyclomycin/multidru 99.9 5.9E-21 1.3E-25 200.6 26.5 159 32-220 6-164 (377)
71 TIGR00792 gph sugar (Glycoside 99.9 4E-20 8.7E-25 198.4 31.9 355 26-508 8-382 (437)
72 TIGR00889 2A0110 nucleoside tr 99.9 4.4E-20 9.5E-25 197.2 31.9 393 21-550 6-404 (418)
73 COG2223 NarK Nitrate/nitrite t 99.9 1E-20 2.3E-25 192.4 24.5 391 12-550 9-403 (417)
74 PRK15034 nitrate/nitrite trans 99.9 4.5E-20 9.8E-25 196.0 30.2 179 17-221 34-231 (462)
75 TIGR00882 2A0105 oligosacchari 99.9 5.7E-20 1.2E-24 194.9 31.1 387 18-545 3-392 (396)
76 PRK10133 L-fucose transporter; 99.9 5.5E-20 1.2E-24 197.5 29.7 155 13-194 22-176 (438)
77 PF05977 MFS_3: Transmembrane 99.9 1.4E-19 3E-24 196.6 31.7 360 17-507 10-370 (524)
78 PF00854 PTR2: POT family; In 99.9 8.5E-22 1.8E-26 207.2 13.0 366 84-489 1-369 (372)
79 PRK08633 2-acyl-glycerophospho 99.9 2E-19 4.3E-24 215.9 34.9 360 16-503 8-381 (1146)
80 PRK06814 acylglycerophosphoeth 99.9 5.3E-20 1.2E-24 220.6 29.2 347 43-505 41-395 (1140)
81 TIGR00886 2A0108 nitrite extru 99.9 1.9E-20 4E-25 195.8 20.1 159 19-206 3-171 (366)
82 PRK11128 putative 3-phenylprop 99.9 2.6E-19 5.7E-24 189.0 29.0 341 22-507 9-356 (382)
83 PRK11010 ampG muropeptide tran 99.9 2.4E-18 5.1E-23 187.5 35.8 178 15-220 10-193 (491)
84 TIGR00883 2A0106 metabolite-pr 99.8 2.7E-19 5.9E-24 188.0 25.5 157 39-216 14-185 (394)
85 PF00083 Sugar_tr: Sugar (and 99.8 6.3E-24 1.4E-28 229.0 -10.6 398 53-561 46-449 (451)
86 TIGR00885 fucP L-fucose:H+ sym 99.8 2.2E-18 4.8E-23 183.5 31.2 165 25-216 11-201 (410)
87 TIGR00896 CynX cyanate transpo 99.8 3.2E-19 6.9E-24 186.2 22.7 147 35-212 17-165 (355)
88 TIGR00901 2A0125 AmpG-related 99.8 1.4E-18 3.1E-23 181.3 26.3 154 39-220 10-176 (356)
89 PRK11902 ampG muropeptide tran 99.8 2.8E-17 6.1E-22 174.7 34.9 168 22-217 4-177 (402)
90 TIGR01301 GPH_sucrose GPH fami 99.8 6.4E-17 1.4E-21 173.1 32.4 442 19-551 6-474 (477)
91 PRK10429 melibiose:sodium symp 99.8 4E-17 8.7E-22 177.3 30.3 364 24-509 13-396 (473)
92 PRK09848 glucuronide transport 99.8 7.5E-17 1.6E-21 174.0 30.5 358 24-508 15-390 (448)
93 KOG0255 Synaptic vesicle trans 99.8 4E-17 8.7E-22 179.5 28.4 140 46-217 111-250 (521)
94 KOG0252 Inorganic phosphate tr 99.8 2.9E-18 6.2E-23 175.1 17.2 448 15-563 36-512 (538)
95 PRK09669 putative symporter Ya 99.8 8.4E-17 1.8E-21 173.4 29.2 172 24-217 16-199 (444)
96 TIGR00788 fbt folate/biopterin 99.8 8.3E-17 1.8E-21 174.2 29.2 386 13-508 21-415 (468)
97 TIGR00806 rfc RFC reduced fola 99.8 2.1E-17 4.5E-22 172.9 22.8 177 14-222 23-203 (511)
98 KOG2615 Permease of the major 99.8 2E-17 4.4E-22 165.3 21.0 118 49-196 64-181 (451)
99 PF03825 Nuc_H_symport: Nucleo 99.8 1.9E-16 4.1E-21 167.2 29.1 384 22-550 7-397 (400)
100 KOG0253 Synaptic vesicle trans 99.8 3.7E-16 8.1E-21 155.1 27.0 425 25-556 85-527 (528)
101 TIGR00805 oat sodium-independe 99.8 4E-17 8.7E-22 182.4 22.3 201 14-221 29-280 (633)
102 PF06609 TRI12: Fungal trichot 99.7 4.5E-16 9.7E-21 169.0 27.3 150 38-218 64-213 (599)
103 TIGR02718 sider_RhtX_FptX side 99.7 2.4E-15 5.2E-20 159.2 31.0 178 19-222 3-184 (390)
104 PF13347 MFS_2: MFS/sugar tran 99.7 6.8E-16 1.5E-20 165.5 25.4 396 26-551 10-424 (428)
105 KOG2504 Monocarboxylate transp 99.7 1.7E-15 3.6E-20 164.1 26.8 419 23-548 48-476 (509)
106 COG0738 FucP Fucose permease [ 99.7 4.4E-15 9.5E-20 150.6 27.4 138 33-196 28-165 (422)
107 KOG2533 Permease of the major 99.7 2.5E-15 5.4E-20 161.3 27.0 152 44-224 72-229 (495)
108 PF01306 LacY_symp: LacY proto 99.7 6.8E-16 1.5E-20 160.7 20.7 390 19-551 9-403 (412)
109 PTZ00207 hypothetical protein; 99.7 5.4E-14 1.2E-18 153.8 35.7 175 13-216 24-199 (591)
110 COG2807 CynX Cyanate permease 99.7 1.2E-14 2.6E-19 145.3 26.8 367 23-549 18-386 (395)
111 KOG3764 Vesicular amine transp 99.7 7.8E-16 1.7E-20 154.9 16.6 149 46-222 99-247 (464)
112 COG2211 MelB Na+/melibiose sym 99.7 7.5E-14 1.6E-18 146.8 30.3 368 15-507 10-397 (467)
113 PRK11462 putative transporter; 99.7 5.7E-14 1.2E-18 151.9 29.5 175 24-219 16-201 (460)
114 KOG4686 Predicted sugar transp 99.6 5E-15 1.1E-19 142.2 9.1 147 28-199 54-200 (459)
115 PF11700 ATG22: Vacuole efflux 99.5 7.5E-12 1.6E-16 135.0 31.4 362 54-546 71-466 (477)
116 PRK10642 proline/glycine betai 99.5 1.2E-13 2.5E-18 150.9 16.8 181 15-221 248-429 (490)
117 PF03209 PUCC: PUCC protein; 99.5 3.9E-11 8.4E-16 123.2 31.7 345 44-507 6-364 (403)
118 PRK15011 sugar efflux transpor 99.5 1.2E-12 2.5E-17 138.9 18.8 179 13-221 212-390 (393)
119 KOG2325 Predicted transporter/ 99.4 1.4E-12 3.1E-17 137.5 14.6 193 7-224 24-231 (488)
120 PRK05122 major facilitator sup 99.4 4.9E-12 1.1E-16 134.2 15.6 168 27-226 226-393 (399)
121 PRK09556 uhpT sugar phosphate 99.4 5E-12 1.1E-16 137.2 15.9 174 19-219 260-446 (467)
122 cd06174 MFS The Major Facilita 99.4 8.5E-12 1.8E-16 128.6 16.9 172 18-218 176-348 (352)
123 TIGR00899 2A0120 sugar efflux 99.4 1.4E-11 3.1E-16 129.0 17.0 167 24-220 206-372 (375)
124 TIGR00883 2A0106 metabolite-pr 99.4 5.2E-12 1.1E-16 132.6 13.7 170 15-211 217-390 (394)
125 PRK03699 putative transporter; 99.4 1.1E-11 2.3E-16 131.5 16.2 168 20-217 208-375 (394)
126 TIGR01299 synapt_SV2 synaptic 99.4 7.1E-12 1.5E-16 141.2 15.3 136 56-221 598-733 (742)
127 PRK09952 shikimate transporter 99.4 1.4E-11 3.1E-16 132.5 17.1 182 15-221 248-432 (438)
128 TIGR00890 2A0111 Oxalate/Forma 99.4 8.7E-12 1.9E-16 130.1 14.9 168 19-214 207-374 (377)
129 COG2270 Permeases of the major 99.4 2E-10 4.4E-15 117.7 24.1 344 36-508 34-405 (438)
130 KOG2563 Permease of the major 99.3 7.9E-11 1.7E-15 121.3 20.6 387 37-558 64-460 (480)
131 KOG3626 Organic anion transpor 99.3 5.4E-11 1.2E-15 130.5 20.1 201 14-225 93-346 (735)
132 TIGR00889 2A0110 nucleoside tr 99.3 1.9E-11 4.2E-16 130.6 15.7 177 21-223 212-403 (418)
133 PRK09874 drug efflux system pr 99.3 3.1E-11 6.7E-16 128.1 17.1 170 25-223 227-399 (408)
134 COG2271 UhpC Sugar phosphate p 99.3 1.5E-11 3.2E-16 125.8 13.3 180 17-222 252-434 (448)
135 TIGR00880 2_A_01_02 Multidrug 99.3 4.4E-12 9.6E-17 112.4 8.4 134 59-221 4-137 (141)
136 PRK09705 cynX putative cyanate 99.3 6.5E-11 1.4E-15 125.6 18.5 175 19-224 207-383 (393)
137 PRK09528 lacY galactoside perm 99.3 1.8E-11 3.8E-16 131.0 13.5 160 31-219 237-400 (420)
138 PF03137 OATP: Organic Anion T 99.3 2.8E-13 6E-18 148.0 -0.6 199 17-226 2-254 (539)
139 PRK03545 putative arabinose tr 99.3 9.7E-11 2.1E-15 123.9 18.6 171 22-223 210-381 (390)
140 PRK11551 putative 3-hydroxyphe 99.3 5.5E-11 1.2E-15 126.3 16.5 167 24-220 227-394 (406)
141 TIGR00891 2A0112 putative sial 99.3 2.3E-11 5E-16 128.5 13.6 158 21-206 242-400 (405)
142 PRK03893 putative sialic acid 99.3 6.4E-11 1.4E-15 129.4 17.1 150 34-210 292-441 (496)
143 PRK12382 putative transporter; 99.3 3.7E-11 7.9E-16 127.2 14.5 161 28-220 227-387 (392)
144 TIGR00893 2A0114 d-galactonate 99.3 6.4E-11 1.4E-15 124.0 16.2 177 17-219 215-396 (399)
145 PRK03633 putative MFS family t 99.3 1.4E-10 3E-15 122.4 18.0 158 30-220 213-370 (381)
146 KOG2816 Predicted transporter 99.3 3.1E-09 6.7E-14 113.7 27.2 366 17-507 18-393 (463)
147 PRK10489 enterobactin exporter 99.3 7.1E-11 1.5E-15 126.1 14.7 162 33-223 239-400 (417)
148 TIGR00902 2A0127 phenyl propri 99.2 1.6E-10 3.4E-15 122.1 17.0 169 17-217 205-374 (382)
149 PRK11663 regulatory protein Uh 99.2 1.3E-10 2.8E-15 124.9 16.0 177 20-222 246-424 (434)
150 PF03092 BT1: BT1 family; Int 99.2 3.6E-09 7.8E-14 113.4 26.8 162 39-223 11-176 (433)
151 TIGR00897 2A0118 polyol permea 99.2 2.8E-10 6.1E-15 121.0 17.5 175 19-220 224-399 (402)
152 PF11700 ATG22: Vacuole efflux 99.2 2.4E-10 5.2E-15 123.3 16.9 187 15-222 279-468 (477)
153 PRK11273 glpT sn-glycerol-3-ph 99.2 1.5E-10 3.2E-15 125.2 14.9 175 19-219 255-432 (452)
154 TIGR01272 gluP glucose/galacto 99.2 3.8E-10 8.3E-15 115.6 17.2 80 128-213 9-104 (310)
155 PRK11010 ampG muropeptide tran 99.2 4.5E-10 9.8E-15 122.6 18.2 179 20-223 225-404 (491)
156 COG2814 AraJ Arabinose efflux 99.2 5.4E-10 1.2E-14 115.6 17.5 179 15-223 209-387 (394)
157 PRK15075 citrate-proton sympor 99.2 3.2E-10 6.9E-15 121.9 16.4 152 24-201 245-398 (434)
158 TIGR00892 2A0113 monocarboxyla 99.2 1.8E-10 4E-15 124.5 14.0 170 19-217 243-416 (455)
159 PRK10406 alpha-ketoglutarate t 99.2 5.5E-10 1.2E-14 120.0 17.4 168 26-220 252-422 (432)
160 TIGR00879 SP MFS transporter, 99.2 3.9E-10 8.4E-15 121.5 15.8 166 39-223 305-471 (481)
161 PRK10504 putative transporter; 99.1 8.1E-10 1.7E-14 119.9 16.6 157 18-200 262-418 (471)
162 PF05977 MFS_3: Transmembrane 99.1 9.4E-10 2E-14 120.0 16.0 172 19-219 220-391 (524)
163 KOG4686 Predicted sugar transp 99.1 8.9E-10 1.9E-14 106.5 13.5 185 7-222 254-443 (459)
164 TIGR00712 glpT glycerol-3-phos 99.1 8.9E-10 1.9E-14 118.6 14.3 180 19-223 253-434 (438)
165 TIGR00900 2A0121 H+ Antiporter 99.1 9E-10 2E-14 114.4 13.5 153 19-199 212-365 (365)
166 PLN00028 nitrate transmembrane 99.1 1.9E-09 4.1E-14 117.3 16.5 171 21-222 256-433 (476)
167 PRK11128 putative 3-phenylprop 99.1 2.8E-09 6E-14 112.5 16.9 165 19-215 207-372 (382)
168 PRK12307 putative sialic acid 99.1 2.8E-09 6.2E-14 113.9 16.7 148 32-207 246-393 (426)
169 PRK15402 multidrug efflux syst 99.1 6.3E-09 1.4E-13 110.7 19.0 168 24-216 222-389 (406)
170 COG2270 Permeases of the major 99.1 2E-09 4.3E-14 110.5 13.9 176 13-218 249-425 (438)
171 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.8E-09 3.8E-14 115.4 13.8 162 20-210 245-409 (412)
172 COG2223 NarK Nitrate/nitrite t 99.0 3.1E-09 6.6E-14 109.1 14.5 186 16-224 217-403 (417)
173 PRK10077 xylE D-xylose transpo 99.0 4.6E-09 9.9E-14 114.1 17.0 160 38-223 292-458 (479)
174 PRK10091 MFS transport protein 99.0 6.5E-09 1.4E-13 109.7 17.2 167 24-220 206-374 (382)
175 TIGR00881 2A0104 phosphoglycer 99.0 2.7E-09 5.8E-14 111.3 13.9 161 18-204 217-379 (379)
176 TIGR02718 sider_RhtX_FptX side 99.0 6.8E-09 1.5E-13 109.8 17.1 174 19-216 210-385 (390)
177 TIGR01272 gluP glucose/galacto 99.0 4.5E-09 9.8E-14 107.7 14.7 160 19-210 142-303 (310)
178 TIGR00882 2A0105 oligosacchari 99.0 5E-09 1.1E-13 111.1 15.6 164 25-217 223-390 (396)
179 PRK10054 putative transporter; 99.0 5.4E-09 1.2E-13 110.9 15.7 174 17-219 206-381 (395)
180 TIGR00711 efflux_EmrB drug res 99.0 3E-09 6.4E-14 115.7 13.7 156 17-197 255-410 (485)
181 PRK14995 methyl viologen resis 99.0 4.6E-09 9.9E-14 114.9 14.9 154 17-196 259-412 (495)
182 PRK11902 ampG muropeptide tran 99.0 1.5E-08 3.2E-13 107.8 18.1 154 38-220 230-388 (402)
183 TIGR00895 2A0115 benzoate tran 99.0 4E-09 8.6E-14 110.9 13.1 146 19-194 252-397 (398)
184 TIGR00792 gph sugar (Glycoside 99.0 3E-09 6.6E-14 114.0 12.2 161 18-201 223-384 (437)
185 TIGR00896 CynX cyanate transpo 99.0 1.3E-08 2.7E-13 106.2 15.6 152 19-199 199-350 (355)
186 PF05631 DUF791: Protein of un 99.0 2.3E-07 5.1E-12 94.2 23.8 153 46-224 62-218 (354)
187 TIGR00887 2A0109 phosphate:H+ 99.0 6.5E-09 1.4E-13 113.9 13.8 167 25-217 296-484 (502)
188 KOG3762 Predicted transporter 98.9 3.4E-08 7.5E-13 103.8 18.1 137 362-548 410-547 (618)
189 TIGR00894 2A0114euk Na(+)-depe 98.9 1.4E-08 3.1E-13 110.1 16.1 177 17-220 261-448 (465)
190 PRK10213 nepI ribonucleoside t 98.9 3.1E-08 6.7E-13 105.1 18.3 164 20-213 219-382 (394)
191 TIGR00710 efflux_Bcr_CflA drug 98.9 3.5E-08 7.7E-13 103.6 17.6 159 21-205 210-369 (385)
192 PRK10133 L-fucose transporter; 98.9 2.2E-08 4.7E-13 107.8 15.9 164 21-216 262-427 (438)
193 PRK08633 2-acyl-glycerophospho 98.9 1.6E-08 3.4E-13 122.0 16.2 161 20-209 235-397 (1146)
194 PRK11646 multidrug resistance 98.9 2.3E-08 5E-13 106.3 15.1 153 35-216 226-382 (400)
195 PRK09848 glucuronide transport 98.9 8.9E-09 1.9E-13 111.1 11.4 162 18-200 229-391 (448)
196 PRK06814 acylglycerophosphoeth 98.9 2E-08 4.3E-13 121.1 15.3 182 18-209 226-409 (1140)
197 PRK15034 nitrate/nitrite trans 98.9 7.8E-08 1.7E-12 102.9 17.7 184 19-221 254-453 (462)
198 PRK11195 lysophospholipid tran 98.9 8.8E-08 1.9E-12 101.6 18.1 160 30-219 218-377 (393)
199 COG2807 CynX Cyanate permease 98.8 1.3E-07 2.8E-12 95.4 17.2 173 13-214 202-377 (395)
200 TIGR00901 2A0125 AmpG-related 98.8 2.6E-08 5.7E-13 103.8 12.9 144 19-181 211-355 (356)
201 TIGR00903 2A0129 major facilit 98.8 1.1E-07 2.4E-12 99.9 16.7 166 17-218 192-361 (368)
202 PF13347 MFS_2: MFS/sugar tran 98.8 6.1E-08 1.3E-12 104.0 15.1 163 17-201 225-388 (428)
203 KOG2504 Monocarboxylate transp 98.8 4.4E-08 9.4E-13 106.6 12.7 176 17-222 298-476 (509)
204 PF07690 MFS_1: Major Facilita 98.8 3.7E-08 8E-13 101.8 10.9 141 22-188 211-352 (352)
205 KOG0253 Synaptic vesicle trans 98.7 1.4E-07 3E-12 94.9 13.7 175 15-220 324-517 (528)
206 PRK11102 bicyclomycin/multidru 98.7 5.2E-07 1.1E-11 94.6 17.5 143 24-192 201-344 (377)
207 TIGR00898 2A0119 cation transp 98.7 7.5E-08 1.6E-12 105.5 11.0 143 46-220 351-493 (505)
208 PF03825 Nuc_H_symport: Nucleo 98.7 6E-07 1.3E-11 95.1 17.2 179 19-221 209-394 (400)
209 PRK11043 putative transporter; 98.7 1E-06 2.2E-11 93.5 18.7 146 27-198 213-358 (401)
210 PRK10473 multidrug efflux syst 98.7 7.6E-07 1.6E-11 94.2 17.5 143 33-209 219-361 (392)
211 PRK10429 melibiose:sodium symp 98.7 1.2E-07 2.5E-12 103.2 11.2 165 17-200 231-396 (473)
212 KOG1330 Sugar transporter/spin 98.6 1.9E-08 4.2E-13 104.2 3.3 150 360-558 70-219 (493)
213 PRK09669 putative symporter Ya 98.6 2.9E-07 6.3E-12 99.3 12.5 159 21-201 233-392 (444)
214 KOG0569 Permease of the major 98.6 1E-06 2.3E-11 94.1 16.3 194 13-228 265-460 (485)
215 KOG3098 Uncharacterized conser 98.6 3.3E-05 7.2E-10 82.0 26.9 104 58-191 55-158 (461)
216 TIGR00880 2_A_01_02 Multidrug 98.6 9.3E-07 2E-11 77.9 12.6 132 367-548 7-138 (141)
217 PF06813 Nodulin-like: Nodulin 98.6 3.2E-06 6.9E-11 83.1 17.0 162 38-223 22-183 (250)
218 TIGR00886 2A0108 nitrite extru 98.5 7.9E-07 1.7E-11 92.8 12.4 139 19-183 227-365 (366)
219 PRK11652 emrD multidrug resist 98.5 4.8E-06 1E-10 88.1 17.5 141 34-201 224-364 (394)
220 PF01306 LacY_symp: LacY proto 98.5 1.9E-06 4E-11 90.4 13.4 178 17-223 220-401 (412)
221 KOG2532 Permease of the major 98.4 2.1E-06 4.6E-11 92.4 12.7 175 18-221 259-446 (466)
222 COG2211 MelB Na+/melibiose sym 98.4 2.6E-06 5.7E-11 90.3 12.5 161 19-200 238-399 (467)
223 TIGR00924 yjdL_sub1_fam amino 98.4 2.7E-06 5.9E-11 92.6 12.9 187 18-223 273-469 (475)
224 TIGR00885 fucP L-fucose:H+ sym 98.4 5.5E-06 1.2E-10 88.4 14.8 158 23-212 238-402 (410)
225 COG0477 ProP Permeases of the 98.3 1E-05 2.2E-10 80.4 15.1 153 31-211 16-174 (338)
226 KOG3764 Vesicular amine transp 98.3 4.3E-06 9.3E-11 85.4 10.4 144 360-553 108-252 (464)
227 PF02487 CLN3: CLN3 protein; 98.3 0.00038 8.1E-09 72.9 24.9 155 23-212 6-185 (402)
228 PRK15403 multidrug efflux syst 98.3 2.4E-05 5.2E-10 83.6 16.2 165 19-210 220-385 (413)
229 PRK11462 putative transporter; 98.2 2.6E-05 5.7E-10 84.5 14.8 156 23-200 234-390 (460)
230 PF01770 Folate_carrier: Reduc 98.1 0.00049 1.1E-08 72.1 21.7 155 38-222 24-182 (412)
231 PF03209 PUCC: PUCC protein; 98.1 0.00011 2.3E-09 76.2 15.9 155 41-220 232-396 (403)
232 PRK09584 tppB putative tripept 98.1 3.2E-05 7E-10 84.7 12.8 178 26-223 281-480 (500)
233 PRK10207 dipeptide/tripeptide 98.1 1.7E-05 3.6E-10 86.6 10.4 149 26-194 278-438 (489)
234 KOG0637 Sucrose transporter an 98.1 1.8E-05 3.9E-10 82.3 9.8 167 17-194 32-202 (498)
235 TIGR01301 GPH_sucrose GPH fami 98.0 0.00011 2.3E-09 79.4 15.8 204 13-224 254-473 (477)
236 KOG4332 Predicted sugar transp 98.0 0.00022 4.8E-09 69.1 15.4 93 43-159 62-155 (454)
237 TIGR00788 fbt folate/biopterin 98.0 8.4E-06 1.8E-10 88.5 6.6 145 45-208 280-429 (468)
238 TIGR00805 oat sodium-independe 98.0 4.2E-05 9E-10 86.1 11.7 137 360-507 70-235 (633)
239 PF06963 FPN1: Ferroportin1 (F 97.9 0.0018 4E-08 68.9 22.4 187 19-217 4-195 (432)
240 TIGR00806 rfc RFC reduced fola 97.9 0.00026 5.6E-09 75.4 15.4 101 369-503 73-173 (511)
241 COG0738 FucP Fucose permease [ 97.9 0.00015 3.2E-09 74.7 12.9 139 35-205 254-392 (422)
242 PF12832 MFS_1_like: MFS_1 lik 97.9 7.4E-05 1.6E-09 59.4 8.5 67 25-93 8-74 (77)
243 PF00083 Sugar_tr: Sugar (and 97.9 1.7E-07 3.6E-12 101.1 -9.2 187 17-225 252-439 (451)
244 KOG3574 Acetyl-CoA transporter 97.9 0.0033 7.2E-08 64.2 21.6 156 13-191 27-189 (510)
245 PRK15462 dipeptide/tripeptide 97.8 0.00012 2.5E-09 79.5 10.8 133 367-548 54-189 (493)
246 KOG2615 Permease of the major 97.8 5E-05 1.1E-09 77.3 7.3 112 360-505 70-181 (451)
247 KOG3762 Predicted transporter 97.8 6.2E-05 1.3E-09 79.8 7.9 172 23-224 377-549 (618)
248 TIGR00769 AAA ADP/ATP carrier 97.7 0.011 2.4E-07 63.7 24.1 164 17-195 7-189 (472)
249 PTZ00207 hypothetical protein; 97.7 0.0004 8.6E-09 76.8 13.1 126 382-549 81-206 (591)
250 PF06609 TRI12: Fungal trichot 97.7 0.00087 1.9E-08 73.9 15.0 150 16-192 309-462 (599)
251 KOG2533 Permease of the major 97.7 0.00018 4E-09 77.9 9.6 163 19-209 275-443 (495)
252 KOG0254 Predicted transporter 97.6 0.0005 1.1E-08 75.6 13.0 195 14-225 291-486 (513)
253 KOG0255 Synaptic vesicle trans 97.4 0.00052 1.1E-08 75.6 9.3 128 363-543 123-250 (521)
254 KOG2563 Permease of the major 97.4 0.0012 2.6E-08 69.0 10.7 182 20-226 269-454 (480)
255 KOG0252 Inorganic phosphate tr 97.3 0.00037 8E-09 72.8 6.2 173 23-220 310-496 (538)
256 KOG2325 Predicted transporter/ 97.1 0.015 3.3E-07 62.3 16.3 161 360-553 73-234 (488)
257 PF05978 UNC-93: Ion channel r 97.0 0.012 2.5E-07 53.6 11.8 113 51-193 35-147 (156)
258 PF06779 DUF1228: Protein of u 96.8 0.0092 2E-07 48.0 8.2 67 38-105 12-78 (85)
259 KOG2816 Predicted transporter 96.8 0.007 1.5E-07 65.2 9.9 127 39-195 263-390 (463)
260 PRK03612 spermidine synthase; 96.7 0.078 1.7E-06 58.3 17.4 168 28-221 25-197 (521)
261 PF03137 OATP: Organic Anion T 96.6 0.00037 8E-09 76.7 -1.4 137 360-507 40-204 (539)
262 KOG3626 Organic anion transpor 96.2 0.048 1E-06 61.1 12.2 139 360-509 134-302 (735)
263 TIGR00926 2A1704 Peptide:H+ sy 96.0 0.039 8.4E-07 62.2 10.8 66 437-502 558-623 (654)
264 PF06813 Nodulin-like: Nodulin 95.8 0.12 2.6E-06 50.9 11.8 99 382-503 56-154 (250)
265 PF00854 PTR2: POT family; In 95.5 0.11 2.4E-06 54.6 11.1 124 401-554 3-129 (372)
266 TIGR00939 2a57 Equilibrative N 95.3 5 0.00011 43.1 31.2 57 444-500 372-428 (437)
267 COG3104 PTR2 Dipeptide/tripept 95.2 0.02 4.4E-07 60.9 4.3 142 367-555 70-213 (498)
268 PF13000 Acatn: Acetyl-coenzym 94.6 4.7 0.0001 43.5 19.8 64 445-508 406-469 (544)
269 PF03092 BT1: BT1 family; Int 94.5 0.23 5.1E-06 53.3 10.4 113 402-550 62-177 (433)
270 KOG0637 Sucrose transporter an 93.9 0.22 4.7E-06 52.6 8.3 130 360-501 69-200 (498)
271 KOG3880 Predicted small molecu 93.8 1.8 3.9E-05 43.6 13.9 158 18-209 13-186 (409)
272 PF06963 FPN1: Ferroportin1 (F 93.0 1.9 4.2E-05 46.1 13.8 138 35-192 276-413 (432)
273 KOG2601 Iron transporter [Inor 92.9 3.6 7.9E-05 42.6 14.6 84 17-101 27-110 (503)
274 PF05978 UNC-93: Ion channel r 92.6 2.4 5.2E-05 38.6 11.9 61 443-503 88-148 (156)
275 PF03219 TLC: TLC ATP/ADP tran 92.4 8.1 0.00018 42.1 17.8 136 51-196 56-205 (491)
276 TIGR00769 AAA ADP/ATP carrier 91.7 7.4 0.00016 42.2 16.5 58 449-506 133-191 (472)
277 KOG3810 Micronutrient transpor 91.7 0.54 1.2E-05 48.0 7.1 95 443-546 325-419 (433)
278 KOG3097 Predicted membrane pro 90.9 2.8 6E-05 42.6 11.2 113 18-160 29-141 (390)
279 KOG1479 Nucleoside transporter 90.8 24 0.00053 37.2 23.2 57 443-499 342-398 (406)
280 COG3202 ATP/ADP translocase [E 90.7 27 0.00059 37.7 23.3 166 13-196 23-209 (509)
281 PF02487 CLN3: CLN3 protein; 90.6 1.8 3.8E-05 45.7 10.2 61 128-194 334-394 (402)
282 KOG3098 Uncharacterized conser 89.9 4.8 0.0001 43.3 12.7 112 64-187 290-404 (461)
283 PF01770 Folate_carrier: Reduc 89.8 12 0.00025 39.8 15.4 81 402-505 74-154 (412)
284 PF05631 DUF791: Protein of un 86.9 35 0.00075 35.4 16.2 93 443-550 120-218 (354)
285 KOG4332 Predicted sugar transp 86.7 4.3 9.3E-05 40.2 9.0 141 55-217 284-426 (454)
286 PF07672 MFS_Mycoplasma: Mycop 85.7 12 0.00026 37.0 11.6 56 169-224 4-64 (267)
287 COG0477 ProP Permeases of the 85.7 8.8 0.00019 37.2 11.3 62 444-505 94-157 (338)
288 TIGR00939 2a57 Equilibrative N 78.4 10 0.00022 40.8 9.0 144 29-190 278-427 (437)
289 KOG3574 Acetyl-CoA transporter 73.2 14 0.00029 38.7 7.7 49 452-500 141-189 (510)
290 PF03219 TLC: TLC ATP/ADP tran 73.1 1.5E+02 0.0032 32.4 17.6 45 461-505 161-205 (491)
291 COG5336 Uncharacterized protei 67.4 11 0.00024 31.5 4.5 43 56-98 45-87 (116)
292 KOG1479 Nucleoside transporter 61.6 1.5E+02 0.0033 31.4 12.9 38 443-480 116-153 (406)
293 PF13000 Acatn: Acetyl-coenzym 58.3 1.1E+02 0.0023 33.4 11.2 37 468-504 142-178 (544)
294 COG5336 Uncharacterized protei 57.0 77 0.0017 26.7 7.7 35 473-507 35-69 (116)
295 PRK03612 spermidine synthase; 53.9 1.9E+02 0.0042 31.9 12.9 51 453-504 119-169 (521)
296 PF07857 DUF1632: CEO family ( 50.8 81 0.0017 31.2 8.3 16 535-550 123-138 (254)
297 KOG1237 H+/oligopeptide sympor 50.7 95 0.0021 34.7 9.9 97 442-555 150-252 (571)
298 KOG4830 Predicted sugar transp 44.6 51 0.0011 32.7 5.6 73 13-88 14-95 (412)
299 PF01733 Nucleoside_tran: Nucl 44.3 7.2 0.00015 39.8 -0.1 116 57-189 186-302 (309)
300 PRK10263 DNA translocase FtsK; 40.4 67 0.0014 39.0 6.9 31 10-40 12-42 (1355)
301 PF09527 ATPase_gene1: Putativ 40.2 75 0.0016 23.0 4.8 36 61-96 8-43 (55)
302 PF06800 Sugar_transport: Suga 37.1 4.4E+02 0.0095 26.3 13.4 22 399-420 136-157 (269)
303 PF07672 MFS_Mycoplasma: Mycop 34.4 3.3E+02 0.0071 27.1 9.6 90 56-163 144-237 (267)
304 PF06645 SPC12: Microsomal sig 33.1 88 0.0019 24.6 4.5 44 174-220 11-54 (76)
305 KOG3880 Predicted small molecu 32.8 76 0.0016 32.4 4.9 58 128-191 341-398 (409)
306 PF11283 DUF3084: Protein of u 31.2 67 0.0014 25.4 3.3 50 370-419 8-65 (79)
307 PF06912 DUF1275: Protein of u 30.0 4.7E+02 0.01 24.6 13.7 36 176-212 167-202 (209)
308 PRK11588 hypothetical protein; 29.8 2E+02 0.0044 31.5 7.9 24 370-393 124-147 (506)
309 KOG1287 Amino acid transporter 29.5 4.3E+02 0.0093 28.7 10.2 30 129-158 304-333 (479)
310 PF01891 CbiM: Cobalt uptake s 29.2 4.8E+02 0.01 24.6 9.8 30 446-475 175-204 (205)
311 PF11947 DUF3464: Protein of u 26.5 3.1E+02 0.0066 24.8 7.3 92 73-186 54-145 (153)
312 PF03606 DcuC: C4-dicarboxylat 26.4 2.1E+02 0.0046 31.0 7.6 22 534-555 205-226 (465)
313 TIGR02230 ATPase_gene1 F0F1-AT 26.4 1.3E+02 0.0028 25.1 4.5 33 64-96 53-85 (100)
314 PRK11469 hypothetical protein; 25.6 4.4E+02 0.0096 24.7 8.6 52 49-101 130-182 (188)
315 PRK15049 L-asparagine permease 24.4 7.4E+02 0.016 27.0 11.5 15 397-411 351-365 (499)
316 KOG4112 Signal peptidase subun 22.8 4.3E+02 0.0093 21.7 7.4 28 533-560 56-83 (101)
317 KOG4112 Signal peptidase subun 20.6 1.8E+02 0.004 23.7 4.1 28 173-201 25-52 (101)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-44 Score=388.87 Aligned_cols=533 Identities=50% Similarity=0.843 Sum_probs=475.7
Q ss_pred cCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHH
Q 008096 12 KKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVAS 91 (577)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (577)
+.+.|+++.++++.+.++++++|++..++..|+.+.+|.+..++...+..+.......++++++++|.|.||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCC---CCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhh
Q 008096 92 IIYQIGMFSLTLSAILPQLRPPPC---QGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 168 (577)
Q Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (577)
++..+|.+++.++..+|.++++.| ..+..|...+......++.++-+..+|.|+..|+..++.+|++++.+++.++.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999999999999887 44557777777788889999999999999999999999999999777666777
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhh
Q 008096 169 TWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRK 248 (577)
Q Consensus 169 r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (577)
+...++++|...+.|..++..+..++.++.||.+.|.++.+++++++++++...+.++..+|.++++.++.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccc--cCCCCCcccccchhhhhhhhhhhhhhhHHHH
Q 008096 249 RNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEED--DIKSPNLWRLNTVHRVEELKSVIRMGPIWAS 326 (577)
Q Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~ 326 (577)
++...+.++..+ .. .........+++...++|++.+..+.. ++...++|+.++.+.+|+.|.+++.++++..
T Consensus 272 ~~~~~~~~~~~~--~~----~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~ 345 (571)
T KOG1237|consen 272 RKAVVSLDPEEL--YY----DCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLT 345 (571)
T ss_pred HhccCCCcchhc--cc----cccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHH
Confidence 887776654333 00 111112223355667888887765532 3446789999999999999999999999999
Q ss_pred HHHHHHHhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHH
Q 008096 327 GILLITAYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGF 406 (577)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~ 406 (577)
.+.+++.+.|+.+++..|+..++++.+.++.++++.+..+..+...+..|+++++..|+.+|..+++.+++++.++.+|+
T Consensus 346 ~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~ 425 (571)
T KOG1237|consen 346 TIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGL 425 (571)
T ss_pred HHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccc
Confidence 99999999999999999999999999845999999999999999999999999999999999998777789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH
Q 008096 407 VISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW 486 (577)
Q Consensus 407 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~ 486 (577)
.+..+++...+.++.+|...+.. +++.+.+++.+|++++++++|++|.+......++.++++|+++|+.+++++.
T Consensus 426 ~~si~sm~~aa~vE~krl~~~~~-----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l 500 (571)
T KOG1237|consen 426 VLSILSMAVAGIVEAKRLKTAVS-----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWL 500 (571)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhh-----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHH
Confidence 99999999999999888777665 2334567999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccccccc
Q 008096 487 TANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFKPIQ 557 (577)
Q Consensus 487 ~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 557 (577)
...++|+.++..++..+...++. ..+|...+++|.++++++||+++....+....+..+.++++.++.+
T Consensus 501 ~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 501 LTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 99999999999999988766543 4589993399999999999999999999999999998887766544
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=329.64 Aligned_cols=461 Identities=20% Similarity=0.296 Sum_probs=347.3
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLH----MPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTIT 88 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg----~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~ 88 (577)
-+|+|.+..+++++++|+++|||+...+..|+..+++ +|++++..+.++|....++.++++||++||+.|+|+++.
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 5589999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhh
Q 008096 89 VASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 168 (577)
Q Consensus 89 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (577)
.|.+++++|++.++..+ ......++++.++.++|.|++.|+..++++|++|++|+||+
T Consensus 97 lGail~~iGh~~L~~~~--------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD-- 154 (498)
T COG3104 97 LGAILMAIGHLVLAISS--------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD-- 154 (498)
T ss_pred HHHHHHHHHHHHHhccc--------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC--
Confidence 99999999999999652 01355689999999999999999999999999999987754
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCC--CChh--hH----HHH
Q 008096 169 TWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPA--GSPF--VR----LMQ 240 (577)
Q Consensus 169 r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~----~~~ 240 (577)
..++++|++.|+|++++|++.+++.+++||+..|..+++.+.++++.++.+++........ ..+. .. ...
T Consensus 155 --~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (498)
T COG3104 155 --GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGG 232 (498)
T ss_pred --CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHH
Confidence 5599999999999999999999999999999999999999999999888887665443221 1111 11 011
Q ss_pred HHHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhh
Q 008096 241 VCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRM 320 (577)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 320 (577)
.+.....-. ++.....+ +....+....+.....--.....|. ... ++||+++..
T Consensus 233 ~~~~~~~~~----------~~~~l~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~---~~~-~er~r~~~~ 286 (498)
T COG3104 233 LVVMILAAL----------LTLLLNQN------------TFSGVLLVISILIAIIYFAEAFRSP---KVF-DERRRLLAA 286 (498)
T ss_pred HHHHHHHHH----------HHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhccC---ccH-HHHHHHHHH
Confidence 110000000 00000000 0000000000000000000000110 112 678889999
Q ss_pred hhHHHHHHHHHHHhhccceeEEe-eccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCch
Q 008096 321 GPIWASGILLITAYAQQGTFSLQ-QAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFL 399 (577)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 399 (577)
+++++..+.||+.+.|.++.+.. .....+++.. ++++++++++++|++.+++++|++++++.++.++. |.+ ++.
T Consensus 287 ~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~--~~p--s~~ 361 (498)
T COG3104 287 IPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN--KQP--STP 361 (498)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC--CCC--Ccc
Confidence 99999999999999999865443 4445555533 58899999999999999999999999999988775 333 788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHH
Q 008096 400 HRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRS 479 (577)
Q Consensus 400 ~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg 479 (577)
.|+..|+.+++.+++++..... + +. +..+..+.+|+++.++++++||.+.+|+..+++.+.+|++..+
T Consensus 362 ~KFalGl~l~g~~fl~l~~~~~----~--~~------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s 429 (498)
T COG3104 362 IKFALGLILAGLGFLILLLAGI----W--FG------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKS 429 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH----h--hc------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHH
Confidence 8899999999999888776531 0 11 1134578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 008096 480 TATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIY 551 (577)
Q Consensus 480 ~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 551 (577)
..+|++...+..|..++..+.+.... . +. ..+......+|+..+..+++..+..+...|+.
T Consensus 430 ~~ma~wfLt~a~~~~l~g~va~~~~~-~-----~~-----~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~ 490 (498)
T COG3104 430 FIMAMWFLTVAAGQTLGGQVAGLTAV-T-----DP-----AYTAFIEGRVFGTIGVVAIVIGILLLLLSPKL 490 (498)
T ss_pred HHHHHHHHHHHHHHHhhceecccccc-c-----ch-----hhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 99999999999999999888664211 0 00 12223335567777777777777766666653
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=2.5e-35 Score=319.57 Aligned_cols=462 Identities=14% Similarity=0.190 Sum_probs=324.6
Q ss_pred ccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHH
Q 008096 11 RKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVA 90 (577)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (577)
..++|||.++.++..++++++++|++.++++.|+++++|++.++++++.+.+.....+.++++|+++||++||||++.++
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 34579999999999999999999999999999999999999999999999999999999999999999933999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
.+++.++.++++++.+ ....++++|+++++|.|+..|+..++++|+||+++++ |.
T Consensus 88 ~~~~~~g~~~~~~~~~---------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~ 142 (489)
T PRK10207 88 AIVLAIGYFMTGMSLL---------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LD 142 (489)
T ss_pred HHHHHHHHHHHHHhcc---------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hh
Confidence 9999999999998651 1233568899999999999999999999999987522 56
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccccccc--CCCCChhhHHHHHH------
Q 008096 171 KYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNL--NPAGSPFVRLMQVC------ 242 (577)
Q Consensus 171 ~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------ 242 (577)
++++++|++.|+|..+||.+++++.++.||++.|++..+.++++++.+...++..++. +|++++. |....+
T Consensus 143 ~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~l~~~~~ 221 (489)
T PRK10207 143 GAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPM-SFSKLLLVLLGS 221 (489)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccch-hhhhHHHHHHHH
Confidence 7899999999999999999999999999999999998776666665555554443332 2222221 111110
Q ss_pred ---HHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhh
Q 008096 243 ---VAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIR 319 (577)
Q Consensus 243 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 319 (577)
........ +............ ...-......+ ..+.++ ..+++.+.
T Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~i~~~~f~~~-----------~~~~~~-~~r~r~~~ 270 (489)
T PRK10207 222 VVMIFVCAWLM-HNVEVANLVLIVL------------------SIVVTIIFFRE-----------AFKLDK-TGRNKMFV 270 (489)
T ss_pred HHHHHHHHHHH-hhhhHHHHHHHHH------------------HHHHHHHHHHH-----------HhcCCH-HHHHHHHH
Confidence 00000000 0000000000000 00000000000 000111 22344555
Q ss_pred hhhHHHHHHHHHHHhhccceeEEeecc-ccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCc
Q 008096 320 MGPIWASGILLITAYAQQGTFSLQQAK-SMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITF 398 (577)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 398 (577)
.+.++...+.+|..+.|.......+.. ..+.+.. ++.++++.+.++|++.+++..|+.++ +.+|.++|+.+.++
T Consensus 271 ~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~----l~~rl~~r~~~~~~ 345 (489)
T PRK10207 271 AFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAG----IYTHLGSKGKDLSM 345 (489)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHH----HHHHHhhCCCCCCc
Confidence 556666678888888887544333332 3444443 67778899999999999999999766 55555555444588
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccH
Q 008096 399 LHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMR 478 (577)
Q Consensus 399 ~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~r 478 (577)
..++.+|+++.+++++.+..... .....+ ...+.+++++.+++.++||.+.+|..++++.+.+|++++
T Consensus 346 ~~k~~~G~~l~~~~~~~~~~~~~---~~~~~~---------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 346 PMKFTLGMFLCSLGFLTAAAAGM---WFADAQ---------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hhcCCC---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 88999999998888765543220 000000 135678888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 008096 479 STATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTF 553 (577)
Q Consensus 479 g~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 553 (577)
|.++|++++.+++|+.++..+...... . .. ...+ ....+.+.++|..+++.+++..+++++..++.++
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~~~-~-~~---~~~~--~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 481 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFTAV-P-DN---ITDP--LETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNR 481 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-c-cc---cccc--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988765421 0 00 0000 0112346778888888888888888777665443
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=7.3e-35 Score=315.56 Aligned_cols=454 Identities=16% Similarity=0.189 Sum_probs=324.8
Q ss_pred ccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHH
Q 008096 11 RKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTIT 88 (577)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~ 88 (577)
+..+|+|.++.++..++++++++|++.++++.|++++ +|+|..+++++.+.+.++..++++++|+++||++|||+++.
T Consensus 4 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 4 TFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 3456888999999999999999999999999999988 99999999999999999999999999999999339999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhh
Q 008096 89 VASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 168 (577)
Q Consensus 89 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (577)
++.++..++.++++++. +.+.++++|++.|+|.|+..|+..++++|++|++++++
T Consensus 84 ~~~~~~~~g~~~~~~~~----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~--- 138 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSI----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR--- 138 (475)
T ss_pred HHHHHHHHHHHHHHhcc----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc---
Confidence 99999999999888765 45668889999999999999999999999999765333
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhh----HH-HH---
Q 008096 169 TWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFV----RL-MQ--- 240 (577)
Q Consensus 169 r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~--- 240 (577)
|+++++++|++.|+|.++||.+++++.+++||++.|++.++.++++.+.+...++..++.++++++.+ +. .+
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA 218 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence 77889999999999999999999999998999999999887777666665555544332221111110 00 00
Q ss_pred ---HHHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhh
Q 008096 241 ---VCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSV 317 (577)
Q Consensus 241 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 317 (577)
.+........ ...+.. ..+ . . ............... ..++ +.+.. ++++.
T Consensus 219 ~~~~~~~~~~~~~-~~~~~~---~~~-~----------~-----~~~~~~~~~~~~~~~--~~~~----~~~~~-~~~~~ 271 (475)
T TIGR00924 219 LLAALALVFFCAW-LMHHVV---IAN-I----------L-----LMTVTLAVIIFFFRL--AFKP----RLDAV-ARNKM 271 (475)
T ss_pred HHHHHHHHHHHHH-HHhccH---HHH-H----------H-----HHHHHHHHHHHHHHH--HHhc----cCCHH-HHhHH
Confidence 0000000000 000000 000 0 0 000000000000000 0000 01112 22333
Q ss_pred hhhhhHHHHHHHHHHHhhcccee-EEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCC
Q 008096 318 IRMGPIWASGILLITAYAQQGTF-SLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGI 396 (577)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 396 (577)
...+++++...++|+.+.|..+. ..++...++.+.. +++++++++.++|++.+++.+|+.+++..++.+| ..+.
T Consensus 272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~----~~~~ 346 (475)
T TIGR00924 272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK----GKDP 346 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC----CCCC
Confidence 44677777788889999888653 3444444566654 6788999999999999999999988755444444 1222
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcc
Q 008096 397 TFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPES 476 (577)
Q Consensus 397 ~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~ 476 (577)
+...|+.+|+++.++++...++.. +.... +...+++|+++.+++.++||.+..|..++++.+.+|++
T Consensus 347 ~~~~k~~~G~~l~~~~~~~~~~~~----~~~~~---------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~ 413 (475)
T TIGR00924 347 TTPLKFTLGMLFCGASFLTFAASI----WFADA---------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR 413 (475)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH----hhcCC---------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH
Confidence 666678999999999988776542 11111 12468899999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 008096 477 MRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIY 551 (577)
Q Consensus 477 ~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 551 (577)
.||+++|++.....+|..+++.+.....+. .++.++|...++.+++..+++++..|+.
T Consensus 414 ~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 414 LMGQMLGMWFLAQAMGSLLGGYLATFGAVP-----------------QGVTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------cchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887764321 1234457777777777777776665543
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=6.5e-34 Score=304.58 Aligned_cols=454 Identities=15% Similarity=0.206 Sum_probs=320.3
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
|++.++.++..++++++++|++..+++.|+++++|+|..+++.+.+.+.....++++++|+++||+.||||++.++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999779999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.++++... .+...++++..+..+|.|...|+..++++|+||+++++ |.++++
T Consensus 87 ~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~ 141 (493)
T PRK15462 87 AIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFS 141 (493)
T ss_pred HHHHHHHHHhh---------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceeh
Confidence 99987776432 01222445555666788888899999999999986433 677899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCC-CCChh--hHHHHH------HHHH
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNP-AGSPF--VRLMQV------CVAA 245 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~------~~~~ 245 (577)
++|++.|+|+.++|.+++++.+.+||++.|.++++.++++.+.++..++...+..+ +.++. ++.... +...
T Consensus 142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (493)
T PRK15462 142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLV 221 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888777777666655544322111 11111 110000 0000
Q ss_pred ----HhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhh-hhhccccccCCCCCcccccchhhhhhhhhhhhh
Q 008096 246 ----FRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDK-AAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRM 320 (577)
Q Consensus 246 ----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 320 (577)
........ +....+.. ..+..-. ..-+...+....++||++...
T Consensus 222 ~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~er~r~~~~ 270 (493)
T PRK15462 222 ATPALITVLFWK--------------------------EWSVYALIVATIIGLG-----VLAKIYRKAENQKQRKELGLI 270 (493)
T ss_pred HHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHH-----HHHHHHHhcCCHHHHhhHHHH
Confidence 00000000 00000000 0000000 000000000123567888888
Q ss_pred hhHHHHHHHHHHHhhccce-eEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCch
Q 008096 321 GPIWASGILLITAYAQQGT-FSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFL 399 (577)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 399 (577)
++++...+.||..++|.++ ...+.....|+++. +++++++++.++|++.+++.+|++.+++.++.+| +|. .+..
T Consensus 271 ~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~--~~~--~s~~ 345 (493)
T PRK15462 271 VTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG--NRT--VRIW 345 (493)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC--CCC--CCcH
Confidence 8999999999999999874 44555567788876 8999999999999999999999988866555433 222 3788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHH
Q 008096 400 HRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRS 479 (577)
Q Consensus 400 ~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg 479 (577)
.|+.+|+++++++++++.... .....+ ...+.+|++..++++++||.+.+|...+++.+.+|++.+|
T Consensus 346 ~Kfa~g~~~~g~~f~~l~~~~----~~~~~~---------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g 412 (493)
T PRK15462 346 GKFALGLGLMSAGFCILTLSA----RWSAMY---------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTG 412 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hhcCCC---------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHH
Confidence 899999999999988776544 111111 2368889999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHH-HHHHhhh
Q 008096 480 TATALFWTA-NSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVN-VIYYFFC 547 (577)
Q Consensus 480 ~~~gi~~~~-~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 547 (577)
+.+|++... ..+|+.++..+..........++ ... ..+...+..+|...+..+++. .++.+.+
T Consensus 413 ~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~----~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 477 (493)
T PRK15462 413 VLTGIYMLLSGAIANYLAGVIADQTSQASFDAS----GAI-NYSINAYIEVFDQITWGALACVGVVLMIW 477 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCcc----ccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999774 46787777777665422100000 000 001234556777777777666 5554444
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=6.1e-33 Score=302.31 Aligned_cols=459 Identities=17% Similarity=0.235 Sum_probs=319.0
Q ss_pred cCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHH
Q 008096 12 KKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVAS 91 (577)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (577)
..+|++.++.+++.++++++++|++.++++.|+++++|+|.++++++.+.+.......++++|+++||++|||+++.++.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~ 95 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 34677888999999999999999999999999999999999999999999887777878899999999339999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhh
Q 008096 92 IIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 171 (577)
Q Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 171 (577)
++..++.++++++. .+...++++|+++|+|.|...|+..++++|++|+++.+ |..
T Consensus 96 ~~~~ig~~l~~~~~---------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~ 150 (500)
T PRK09584 96 IVLAIGYALVAWSG---------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDG 150 (500)
T ss_pred HHHHHHHHHHHHhc---------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhh
Confidence 99999988888753 13455678899999999999999999999999876422 456
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccccccc--CCCCChhh--HHHH----HH-
Q 008096 172 YFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNL--NPAGSPFV--RLMQ----VC- 242 (577)
Q Consensus 172 ~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~----~~- 242 (577)
+++++|++.++|..+||++++++.+++||++.|++.++..+++++.+....+..++. ++.+++.+ .... ..
T Consensus 151 ~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
T PRK09584 151 AFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVA 230 (500)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHH
Confidence 789999999999999999999999999999999998876666655544443322221 22222211 1100 00
Q ss_pred HHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhh
Q 008096 243 VAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGP 322 (577)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 322 (577)
...........++ ..... ............ ... ....+ ..++++.+..+.
T Consensus 231 ~~~~~~~~~~~~~----~~~~~-----------~~~~~~~~~~~~---~~~-----------~~~~~-~~~~~~~~~~~~ 280 (500)
T PRK09584 231 LIAIATWLLHNQE----IARMA-----------LGVVALGIVVIF---GKE-----------AFAMK-GAARRKMIVAFI 280 (500)
T ss_pred HHHHHHHHHhcch----HHHHH-----------HHHHHHHHHHHH---HHH-----------HhhcC-HHHHHHHHHHHH
Confidence 0000000000000 00000 000000000000 000 00011 124455555566
Q ss_pred HHHHHHHHHHHhhccceeEEeecc-ccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhH
Q 008096 323 IWASGILLITAYAQQGTFSLQQAK-SMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHR 401 (577)
Q Consensus 323 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 401 (577)
+++..+.+|+.+.|.++....+.. ..+++.. ++.++++++.++|++.+++.+|+.++...++.+|. ++..+
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-------~~~~~ 352 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-------PMPHK 352 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-------CcHHH
Confidence 677788899999998876554433 2344443 67788999999999999999999877554444442 56678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHH
Q 008096 402 MGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTA 481 (577)
Q Consensus 402 ~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~ 481 (577)
+.+|+++.+++++.+.... ..... ....+.+++++.+++.++||++..|...+++.+.+|++.||.+
T Consensus 353 ~~~G~~l~~l~f~~l~~~~----~~~~~---------~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~ 419 (500)
T PRK09584 353 FAIGMVLCSGAFLVLPLGA----KFAND---------AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFI 419 (500)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhcCC---------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHH
Confidence 9999999999988876654 11111 1346788899999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 008096 482 TALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTF 553 (577)
Q Consensus 482 ~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 553 (577)
+|++.....+|+.++..+...+.. . .-..+.....+.+.++|...++.+++..+++++..++.++
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~~~~~---~----~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVANLMAV---P----DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc---c----cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888888887654321 0 0000101112336677888888777666666666655443
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.95 E-value=4.2e-25 Score=233.73 Aligned_cols=373 Identities=12% Similarity=0.056 Sum_probs=244.5
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
+|...+.+....++.....+...+.+| .+.+++|.|.++.+++.+.+.++..+++++.|+++||+ |||+++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 454444544455555455554444444 56779999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+.++++. +++.+++.|+++|++.+...|...+++.|++|+++ |+++++
T Consensus 85 ~~~~~~~~~~~----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g 136 (390)
T PRK03545 85 IASHVLSALAW----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALS 136 (390)
T ss_pred HHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHH
Confidence 99999998876 78889999999999999999999999999999887 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCC
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMV 254 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (577)
++..+.++|..++|.+++.+.+.+|||+.|++.++..++..+......|+.+++ ++++.++.
T Consensus 137 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~---------------- 198 (390)
T PRK03545 137 LLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLKSL---------------- 198 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHHHH----------------
Confidence 999999999999999999998889999999998876655544433332221110 00000000
Q ss_pred CCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhh-hhHHHHHHHHHHH
Q 008096 255 SDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRM-GPIWASGILLITA 333 (577)
Q Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~l~~~~~~~~~~ 333 (577)
+.....+..... ..........+..
T Consensus 199 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 199 ------------------------------------------------------PLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred ------------------------------------------------------HHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 000000111111 1111111111111
Q ss_pred hhccceeEEeecccccccccccccc-ccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHH
Q 008096 334 YAQQGTFSLQQAKSMDRHLTKSFQI-PAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLA 412 (577)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~ 412 (577)
....+.+ ..... +.+. ..+.+.....+..+++..+.+ ++.||.++|. +..+..+..++
T Consensus 225 ~~~~~~~-------l~~~~--g~s~~~~~~~~~~~~~~~~~g~~~~g----~l~dr~~~~~--------~~~~~~~~~~~ 283 (390)
T PRK03545 225 YSYIEPF-------VQQVA--GLSENFATLLLLLFGGAGIIGSVLFS----RLGNRHPSGF--------LLIAIALLLVC 283 (390)
T ss_pred HHHHHHH-------HHHhc--CCCccHHHHHHHHHHHHHHHHHHHHH----HHhhccchhH--------HHHHHHHHHHH
Confidence 1111111 01111 1111 123333334444455555544 4666654321 44454444444
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHH
Q 008096 413 TLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIG 492 (577)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg 492 (577)
........ .+.+.+.+..++.|++.....+.....+.+..| +.|++++|+.+....+|
T Consensus 284 ~~~l~~~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 341 (390)
T PRK03545 284 LLLLLPAA---------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIG 341 (390)
T ss_pred HHHHHHHh---------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHH
Confidence 43332222 134444556667788877777777788888877 57899999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008096 493 NYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAK 549 (577)
Q Consensus 493 ~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 549 (577)
..+|+.+.|.+.+.. ++...|+..+++.++++++.++..+
T Consensus 342 ~~~G~~~~G~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 342 IGAGALLGNQVSLHL-----------------GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHhcc-----------------ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999987654 2245577777778887777766654
No 8
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=5.4e-25 Score=233.94 Aligned_cols=361 Identities=12% Similarity=0.058 Sum_probs=237.6
Q ss_pred cccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHH
Q 008096 10 NRKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITV 89 (577)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~ 89 (577)
++.+.+|..+.......+++.+..+..-...| .+.+++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~ 85 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIV 85 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHH
Confidence 45567888777777788888887777666655 45578999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 169 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (577)
+.++..++.++++++. +.+.+++.|++.|++.+...+...+++.|++|+++ |
T Consensus 86 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r 137 (406)
T PRK11551 86 SVALFGLFSLATAQAW----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------R 137 (406)
T ss_pred HHHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------H
Confidence 9998888888888765 67789999999999999999999999999999877 9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhc
Q 008096 170 WKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKR 249 (577)
Q Consensus 170 ~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (577)
++++++++.+..+|..+++.+++.+.+..+|++.|++.+++.++..+......|+.+..++.++
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------------- 201 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG---------------- 201 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC----------------
Confidence 9999999999999999999999888888999999988776555444443333332111000000
Q ss_pred cccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHH
Q 008096 250 NLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGIL 329 (577)
Q Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~ 329 (577)
+ .+++ ...++.. .+....++..............
T Consensus 202 ~---~~~~------------------------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (406)
T PRK11551 202 A---GKQR------------------------------------------APVLRAL-FGEGRATATLLLWISYFFTLIV 235 (406)
T ss_pred c---chhh------------------------------------------hhhHHHH-hhhhhhhHHHHHHHHHHHHHHH
Confidence 0 0000 0000000 0000001111111111111111
Q ss_pred HHHHhhccceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHH
Q 008096 330 LITAYAQQGTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVI 408 (577)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~ 408 (577)
.+......+.+ ... . +++ ...+.......+..+++..+.++ +.||.++|+. +..+.+.
T Consensus 236 ~~~~~~~~p~~-------~~~-~--g~s~~~~~~~~~~~~~~~~~~~~~~g~----l~dr~g~~~~-------~~~~~~~ 294 (406)
T PRK11551 236 LYFLLNWLPSL-------LVG-Q--GLSRSQAGLVQIAFNIGGALGSLLIGA----LMDRLRPRRV-------VLLIYAG 294 (406)
T ss_pred HHHHHHHHHHH-------HHh-C--CCChhhhhHHHHHHHHHHHHHHHHHHH----HHHHHhHHHH-------HHHHHHH
Confidence 22211111111 110 1 111 11233334444445555555444 5555543321 3444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHH
Q 008096 409 SVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTA 488 (577)
Q Consensus 409 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~ 488 (577)
..++++...... +.+.+....++.+++.....+..+.++.+..|++.||++.|+.+..
T Consensus 295 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 295 ILASLAALAAAP----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred HHHHHHHHHhcC----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 444444333222 3334444556677777777888889999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHhh
Q 008096 489 NSIGNYVSTLLVTLVHK 505 (577)
Q Consensus 489 ~~lg~~l~~~i~~~v~~ 505 (577)
+.+|..+++.+.+.+.+
T Consensus 353 ~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 353 GRLGSMAGPLLAGQLLA 369 (406)
T ss_pred hhHHHHHHhhhHhhhhc
Confidence 99999999999998754
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=3.3e-25 Score=248.16 Aligned_cols=157 Identities=14% Similarity=0.118 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 008096 36 FHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPC 115 (577)
Q Consensus 36 ~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (577)
....+.+++.+++|++..+.+++.+++.++.+++++++|+++||+ |||+++++++++..++.++++++.
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~---------- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ---------- 253 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 344555677789999999999999999999999999999999998 999999999999999999988876
Q ss_pred CCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc
Q 008096 116 QGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ 195 (577)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~ 195 (577)
+++.++++|++.|+|.|+..|...++++|.+|++. |++.+++..++..+|.++++.++..+.
T Consensus 254 ------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 254 ------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999777 999999999999999999988765554
Q ss_pred cc-------------ccchhhhHHHHHHHHHHHHHHHHc
Q 008096 196 DN-------------VGWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 196 ~~-------------~gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
.. .+||+.+++.++..++.++..++.
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~l 354 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFM 354 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 32 368888888777666555544443
No 10
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=1.4e-24 Score=229.69 Aligned_cols=374 Identities=13% Similarity=0.104 Sum_probs=243.5
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
+..+.+.+..++..+......+.+|.|+++++|+|.++.+++.+.+.++..+++++.|+++||+ ||||.+..+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 4444555577777777888889999999999999999999999999999999999999999999 999999999887777
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+.+........+. ....+++.+++.|+++|++.+...+...+++.|.+|+++ |+++++++
T Consensus 94 ~~~~~~~~~~~~~--------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~~~ 153 (392)
T PRK12382 94 AGLAYLLAAILPV--------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMSWN 153 (392)
T ss_pred HHHHHHhhhcccc--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhhHH
Confidence 6554433211110 011367889999999999999999999999999999887 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCC
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSD 256 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (577)
+.+.++|..+||.+++++.+.+||++.+.+..+..++.+. ... +.++.+++++...+
T Consensus 154 ~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~------------------- 210 (392)
T PRK12382 154 GMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FNG-TVRKVPAHAGERPS------------------- 210 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HHH-hccCCCCCcccCch-------------------
Confidence 9999999999999999998888999876655443322221 111 11110000000000
Q ss_pred CcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhc
Q 008096 257 PNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQ 336 (577)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~ 336 (577)
.++.. +.. .+... . .......+......
T Consensus 211 ---------------------------------------------~~~~~--~~~-~~~~~-~---~~l~~~~~~~~~~~ 238 (392)
T PRK12382 211 ---------------------------------------------LWSVV--GLI-WKPGL-G---LALQGVGFAVIGTF 238 (392)
T ss_pred ---------------------------------------------HHHHH--HHH-HHhHH-H---HHHHHHHHhHHHHH
Confidence 00000 000 00000 0 00111111111111
Q ss_pred cceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHH
Q 008096 337 QGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVA 416 (577)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~ 416 (577)
.+.+.. +... . ..+.......+..++..++.+ ++.||+++|+. +..+..+.++++++.
T Consensus 239 ~~~~~~------~~~~----~-~~~~~~~~~~~~~~~~~~~~g----~l~~r~g~~~~-------~~~~~~~~~~~~~~~ 296 (392)
T PRK12382 239 VSLYFA------SKGW----A-MAGFTLTAFGGAFVLMRVLFG----WMPDRFGGVKV-------AIVSLLVETVGLLLL 296 (392)
T ss_pred HHHHHH------hcCC----c-hhHHHHHHHHHHHHHHHHHHH----HHHHhcCCCee-------hHHHHHHHHHHHHHH
Confidence 011100 0001 0 011222223333444455544 46666665543 566666666666554
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHH
Q 008096 417 GFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVS 496 (577)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~ 496 (577)
...+ +.+...+..++.+++.+...+.....+.+..|++.||++.|+.++...+|..++
T Consensus 297 ~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 297 WLAP----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred HHcc----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4332 334445566778888888888888888999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhh
Q 008096 497 TLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFC 547 (577)
Q Consensus 497 ~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 547 (577)
+.+.+.+.+.. + +...|.+.+++.+++.++.++.
T Consensus 355 ~~~~g~l~~~~------g-----------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 355 GPLAGMLATSF------G-----------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHh------C-----------chHHHHHHHHHHHHHHHHHHhh
Confidence 99999987653 1 2445777777777777666544
No 11
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=2e-24 Score=229.06 Aligned_cols=375 Identities=14% Similarity=0.073 Sum_probs=247.5
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
.++.+..+....+...++.....+.+|.|+++++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 345556666688888888888899999999999999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+.+.++..... ....+...+++.|+++|++.+...+...+++.|.+|+++ |+++.+
T Consensus 92 ~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~ 151 (399)
T PRK05122 92 ALSGLLYLLAGLLAA--------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVIS 151 (399)
T ss_pred HHHHHHHHHhhhhhc--------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchh
Confidence 888777665431110 001246678999999999999999999999999999888 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCC
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMV 254 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (577)
++..+..+|..+|+.+++++.+.+||++.+++..+..++..+. ..+. +..++++++..
T Consensus 152 ~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~------------------ 209 (399)
T PRK05122 152 WNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL---ARPR-PAVPPVKGERL------------------ 209 (399)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH---HhcC-CCCCCCCccch------------------
Confidence 9999999999999999999998899999887766544333222 1111 10000000000
Q ss_pred CCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhh-hhHHHHHHHHHHH
Q 008096 255 SDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRM-GPIWASGILLITA 333 (577)
Q Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~l~~~~~~~~~~ 333 (577)
+++ +..|..... ....+....+...
T Consensus 210 -----------------------------------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
T PRK05122 210 -----------------------------------------------PFR-------RVLGRVWPYGMGLALASIGFGTI 235 (399)
T ss_pred -----------------------------------------------hHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000000000 0011111111111
Q ss_pred hhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHH
Q 008096 334 YAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLAT 413 (577)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~ 413 (577)
....+.+.. +. +. ...........+..++..++. .++.||.++|+ .+..+.++.++++
T Consensus 236 ~~~~~~~~~------~~----~~-~~~~~~~~~~~~~~~~~~~~~----g~l~~r~~~~~-------~~~~~~~~~~~~~ 293 (399)
T PRK05122 236 ATFITLYYA------AR----GW-DGAALALTLFGVAFVGARLLF----GNLINRLGGLR-------VAIVSLLVEILGL 293 (399)
T ss_pred HHHHHHHHH------Hc----cc-ccchHHHHHHHHHHHHHHHHH----HHHHHHhccHH-------HHHHHHHHHHHHH
Confidence 111111100 00 00 001122223333344444443 34666654332 2556666666666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHH
Q 008096 414 LVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGN 493 (577)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~ 493 (577)
++..... +.+..++..++.|++.+...+.....+.+..|++.||+++|+.+....+|.
T Consensus 294 ~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 294 LLLWLAP----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HHHHHhc----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 5554433 344455566788888888888877888899999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhh
Q 008096 494 YVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFC 547 (577)
Q Consensus 494 ~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 547 (577)
.+++.+.+.+.+.. ++.+.|+..+++.+++.+..+++
T Consensus 352 ~~~~~~~g~l~~~~-----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 352 GITGPLAGLVASWF-----------------GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHHHHHHc-----------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988876543 23455777777777766665544
No 12
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=4.7e-25 Score=235.46 Aligned_cols=391 Identities=13% Similarity=0.074 Sum_probs=246.7
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
...++...++..+........+|.+.+ +++.|..+.+++.+.+.++..+++++.|+++||+ |||+.+..+.++..++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGF 96 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHH
Confidence 344555566777776666677777664 6778999999999999999999999999999998 99999998888777776
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+.+++..... ..+++.+++.|+++|++.+...++..+++.|++|+++ |+++.++.+.
T Consensus 97 ~~~~~~~~~~-----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 153 (417)
T PRK10489 97 IGLALNAFLP-----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITML 153 (417)
T ss_pred HHHHHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHH
Confidence 6655321000 1256778899999999998888999999999999776 8899999999
Q ss_pred HHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccC-CCCChhhHHHHHHHHHHhhccccCCCCC
Q 008096 179 VMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLN-PAGSPFVRLMQVCVAAFRKRNLDMVSDP 257 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (577)
..++|..+||.+++.+.+..+|++.|++.++..++..++....+ +.++.+ ++.++.++..+
T Consensus 154 ~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~----------------- 215 (417)
T PRK10489 154 TVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLP-ALPPPPQPREHPLRSLLA----------------- 215 (417)
T ss_pred HHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC-CCCCCCcccccchHHHHH-----------------
Confidence 99999999999999998888999999887776665554443322 111000 00000000000
Q ss_pred cccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhcc
Q 008096 258 NVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQ 337 (577)
Q Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~ 337 (577)
.+ +...+.+.+...................
T Consensus 216 --------------------------------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (417)
T PRK10489 216 --------------------------------------------GF-----RFLLASPVVGGIALLGGLLTMASAVRVL- 245 (417)
T ss_pred --------------------------------------------HH-----HHHHcChHHHHHHHHHHHHHHHHhHHHh-
Confidence 00 0000011111111110110011111111
Q ss_pred ceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHH
Q 008096 338 GTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVA 416 (577)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~ 416 (577)
.+.+..... +.+ ...+.+.....++.+++..+.+ ++.||..++ +.+..+.++.++++++.
T Consensus 246 ------~p~~~~~~~--g~~~~~~g~~~~~~~~g~~ig~~~~~----~l~~~~~~~-------~~l~~~~~~~~~~~~~~ 306 (417)
T PRK10489 246 ------YPALADEVW--QMGAAQIGLLYAAVPLGAALGALTSG----WLAHSARPG-------LLMLLSTLGSFLAVGLF 306 (417)
T ss_pred ------hHHHHHhcc--CCChhHhHHHHHHHHHHHHHHHHHHH----HhhhccCcc-------hHHHHHHHHHHHHHHHH
Confidence 111112111 111 1123333444444455554433 344442211 22556666666665544
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHH
Q 008096 417 GFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVS 496 (577)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~ 496 (577)
...+ +++......++.+++.+...+..+.++.+..|++.||++.|++++.+.+|..++
T Consensus 307 ~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g 364 (417)
T PRK10489 307 GLMP----------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIG 364 (417)
T ss_pred Hccc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHH
Confidence 4322 444445566777888777778888899999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhccccccccccc
Q 008096 497 TLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFKPIQMHQ 560 (577)
Q Consensus 497 ~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 560 (577)
+.+.|.+.+..+. ...++..+++.++..++.+...++.|+++.||.+
T Consensus 365 ~~l~G~l~~~~g~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (417)
T PRK10489 365 AALLGGLGAMMTP-----------------VASASASGFGLLIIGVLLLLVLGELRRFRQTPPE 411 (417)
T ss_pred HHHHHHHHHHhch-----------------hhHHHHHHHHHHHHHHHHHHhccccccccccccc
Confidence 9999998765411 2235555655555555555566766766666554
No 13
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=4.2e-25 Score=241.64 Aligned_cols=183 Identities=14% Similarity=0.073 Sum_probs=137.7
Q ss_pred CCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHH
Q 008096 14 GGIITMPFIFANEVCEKLAVVGFHANMISYLTTQ----LHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITV 89 (577)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~ 89 (577)
.|++.+..+....+.+.+....+-...+..-.+. .+.+..+.+++.+.+.++..+++++.|+++||+ |||+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 3444444444455555554443344344332222 245677889999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 169 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (577)
++++..++.++++++.+.. +..+...++++|+++|++.|+..+...++++|.+|+++ |
T Consensus 92 ~~~~~~v~~~~~~~~~~~~----------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------R 149 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSS----------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------R 149 (502)
T ss_pred HHHHHHHHHHHHHHccCcc----------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------H
Confidence 9999999998888764100 01136789999999999999999999999999999988 9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhcc-----------------------cccchhhhHHHHHHHHHHHHHHH
Q 008096 170 WKYFNWYYFVMGAAVLVAVTVLVYIQD-----------------------NVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 170 ~~~~~~~~~~~~ig~~lg~~i~~~l~~-----------------------~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
+++.++.+....+|..+++.+..++.. +++||+.|.+.++..++.++...
T Consensus 150 g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~ 222 (502)
T TIGR00887 150 GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRL 222 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888765421 24799999887776665544433
No 14
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1.1e-24 Score=231.06 Aligned_cols=355 Identities=11% Similarity=0.075 Sum_probs=236.5
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
.+|+.+.++...++...+.+...++++.|+++++|+|..+.+++.+.+.+++.+++++.|+++||+ |||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 446677878889999999999999999999999999999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+.+++++ +.+.+++.|.+.+.+.+...++..++..|.+|+++ |+++++
T Consensus 84 ~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g 135 (395)
T PRK10054 84 ASGFIAIPLVN----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFS 135 (395)
T ss_pred HHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHH
Confidence 88888888766 56677788888888878888889999999999777 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCC
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMV 254 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (577)
+.+...++|..+||.+++++.+ .+|+.+|++.++..++..+......++.++++++++ ++ .
T Consensus 136 ~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~--~~------------~---- 196 (395)
T PRK10054 136 LNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET--GS------------V---- 196 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccch--hh------------h----
Confidence 9999999999999999998874 799999998887766665444333332111100000 00 0
Q ss_pred CCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhh-hHHHHHHHHHHH
Q 008096 255 SDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMG-PIWASGILLITA 333 (577)
Q Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~l~~~~~~~~~~ 333 (577)
|+ .+...+.|...... ...+........
T Consensus 197 ------------------------------------------------~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~ 225 (395)
T PRK10054 197 ------------------------------------------------WS---PSVLLQDKALLWFTCSGFLASFVSGAF 225 (395)
T ss_pred ------------------------------------------------hh---hhhhccCceehHHHHHHHHHHHHHHHh
Confidence 00 00000111111111 111111111111
Q ss_pred hhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHH
Q 008096 334 YAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLAT 413 (577)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~ 413 (577)
......+.. ...+.... +...+.+...+....+.. .....++.||.++|+ .+..++.+.++++
T Consensus 226 ~~~~~~~~~---~~~~~~~~---~~~~g~~~~~~~~~~~~~----~~~~g~~~~~~~~~~-------~l~~~~~~~~~~~ 288 (395)
T PRK10054 226 ASCISQYVM---VVADSDFA---EKVVAVVLPVNAAMVVSL----QYSVGRRLNAANIRP-------LMTAGTLCFVIGL 288 (395)
T ss_pred hhhHHHHHH---HhcccchH---HHHHHHHHHhhhhheeee----hhHHHHHHccCCchh-------HHHHHHHHHHHHH
Confidence 000011100 00010010 000112222222222222 223344555554333 2667776666666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHH
Q 008096 414 LVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGN 493 (577)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~ 493 (577)
....... .+++.+.+..++.++++....|..+..+.+.+|++.|+++.+..+ ...+|.
T Consensus 289 ~~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~ 346 (395)
T PRK10054 289 VGFIFSG---------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGA 346 (395)
T ss_pred HHHHHcc---------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHH
Confidence 5554322 133334456678999999989999999999999999999998765 566899
Q ss_pred HHHHHHHHHHhhhc
Q 008096 494 YVSTLLVTLVHKFS 507 (577)
Q Consensus 494 ~l~~~i~~~v~~~~ 507 (577)
.+||.+.|.+.|..
T Consensus 347 ~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 347 AINPLVSGVILTTL 360 (395)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988765
No 15
>PRK10504 putative transporter; Provisional
Probab=99.94 E-value=3.5e-24 Score=232.38 Aligned_cols=179 Identities=13% Similarity=0.097 Sum_probs=153.6
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ 95 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (577)
.+..+.+....++..+..+.+.+.+|.+.+ ++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 345566666777788888888888888875 6999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
++.+.+.++. +.+.+++.|+++|++.+...|...+++.|.+|+++ |++++++
T Consensus 87 ~~~~~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 138 (471)
T PRK10504 87 LGSLFCALSG----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTF 138 (471)
T ss_pred HHHHHHHHhC----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 8888877654 67778999999999999999999999999999766 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccc
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
.+...++|..+||.+++++.+..||++.|++..+...+..+......++
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998999999998877665555544444443
No 16
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=5.8e-24 Score=225.83 Aligned_cols=348 Identities=13% Similarity=0.094 Sum_probs=235.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF 99 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 99 (577)
..++...++...+.+...++++.|+++++|+|..+.|++.+.+.+...+.+++.|+++||+ |||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5566788899999999999999999999999999999999999999999999999999998 999999999999999998
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
++.++. +.+.+++.|+++|++.+...|...+++.|.+|+++ |+++.++.+..
T Consensus 92 ~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~ 143 (400)
T PRK11646 92 TMAIAH----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQ 143 (400)
T ss_pred HHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHH
Confidence 888765 67788999999999999899999999999999877 99999999999
Q ss_pred HHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcc
Q 008096 180 MGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNV 259 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (577)
.++|..+||.+++++. .+||++.|++.++..++..++.....|+.+. ++..++.++
T Consensus 144 ~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~---------------------- 199 (400)
T PRK11646 144 DSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPVRE---------------------- 199 (400)
T ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhhHH----------------------
Confidence 9999999999999998 7899999998877655544433333222110 000000000
Q ss_pred cccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccce
Q 008096 260 LYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGT 339 (577)
Q Consensus 260 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~ 339 (577)
.+ +...+.+........ ...++....+...
T Consensus 200 ------------------------------------------~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 229 (400)
T PRK11646 200 ------------------------------------------GM-----TRVLRDKRFVTYVLT---LTGYYMLAVQVML 229 (400)
T ss_pred ------------------------------------------HH-----HHHHcCchHHHHHHH---HHHHHHHHHHHHH
Confidence 00 000001111111111 1111111111100
Q ss_pred eEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 008096 340 FSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFV 419 (577)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~ 419 (577)
+ .+.+..... +.+...+.+.....+..+..... ..+..+|+. +..+.+..+..+.++++++....
T Consensus 230 ~---~p~~~~~~~--~~~~~~g~l~~~~~~~~~~~~~~----~~~~~~~r~------~~~~~~~~~~~~~~~~~~~l~~~ 294 (400)
T PRK11646 230 M---LPIMVNDIA--GSPSAVKWMYAIEACLSLTLLYP----IARWSEKRF------RLEHRLMAGLLIMSLSMFPIGMV 294 (400)
T ss_pred h---hhhhHHhhc--CCchHHHHHHHHHHHHHHHHHHH----HHHHHHHhc------chhHHHHHHHHHHHHHHHHHHHh
Confidence 0 111111111 11111222222232222222222 233333321 12223566666666666555443
Q ss_pred HHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHH
Q 008096 420 EMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLL 499 (577)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i 499 (577)
. +.+.+....++.+++.+...|....++.+.+|++.||+++|+.+....+|..+++.+
T Consensus 295 ~----------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 295 S----------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred h----------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccc
Confidence 3 333444455667888888888999999999999999999999999999999999999
Q ss_pred HHHHhhhc
Q 008096 500 VTLVHKFS 507 (577)
Q Consensus 500 ~~~v~~~~ 507 (577)
.|.+.+..
T Consensus 353 ~G~l~~~~ 360 (400)
T PRK11646 353 GGWLFDLG 360 (400)
T ss_pred hHHHHHHH
Confidence 99998764
No 17
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=5.4e-25 Score=239.10 Aligned_cols=155 Identities=13% Similarity=0.172 Sum_probs=125.6
Q ss_pred CCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccch
Q 008096 49 HMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQ 128 (577)
Q Consensus 49 g~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (577)
+.+..+.+++.+.+.++..+++++.|+++||+ |||+++..+.+++.++.+.++++...-.-. ...+...
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~----------~~~~~~~ 119 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSI----------GPDNTGY 119 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccc----------cccchhH
Confidence 89999999999999999999999999999998 999999999999999888877642000000 0001224
Q ss_pred hHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc--------ccccc
Q 008096 129 LAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ--------DNVGW 200 (577)
Q Consensus 129 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~--------~~~gw 200 (577)
+..++++|+++|++.|+..|...++++|++|+++ |++++++.+.+..+|.++++.+++.+. +.+||
T Consensus 120 ~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 193 (479)
T PRK10077 120 VPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGW 193 (479)
T ss_pred HHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCCh
Confidence 5678899999999999999999999999999888 999999999999999999987765443 35799
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q 008096 201 NWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 201 ~~~f~~~~~~~~~~~~~~~~ 220 (577)
|+.|++.++..++..+..++
T Consensus 194 r~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 194 RYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999887766655444333
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=4.9e-24 Score=228.94 Aligned_cols=160 Identities=16% Similarity=0.141 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLS 104 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~ 104 (577)
..++..+..+.....+|.+. +++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++.++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~ 108 (434)
T PRK11663 31 GYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFS 108 (434)
T ss_pred HHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHH
Confidence 34444444445555565555 57999999999999999999999999999999998 99999999999999999988887
Q ss_pred hhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHH
Q 008096 105 AILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAV 184 (577)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 184 (577)
. +++.+++.|++.|++.|...+...+++.|++|+++ |+++.++++.+.++|.
T Consensus 109 ~----------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g~ 160 (434)
T PRK11663 109 S----------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHNVGG 160 (434)
T ss_pred h----------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHH
Confidence 6 67788899999999999999999999999999877 9999999999999999
Q ss_pred HHHHHHHHhhcccccchhhhHHHHHHHHHH
Q 008096 185 LVAVTVLVYIQDNVGWNWGLGIPTVAMFLS 214 (577)
Q Consensus 185 ~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~ 214 (577)
.+++.+.+++.+.+|||+.|++.++..++.
T Consensus 161 ~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 161 ALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 999999999998899999998877655443
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=5.3e-24 Score=223.21 Aligned_cols=159 Identities=15% Similarity=0.067 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 008096 35 GFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPP 114 (577)
Q Consensus 35 ~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 114 (577)
.......+.+++++|+|.++.+++.+.+.+++.+++++.|+++||+ |||+++..+.+....+.. +....
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~--------- 76 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP--------- 76 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh---------
Confidence 3444444556779999999999999999999999999999999998 999887655544444332 22221
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 115 CQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
.++..+++.|+++|+|.+. .+...+.++|++|+++ |++++++.+.+..+|..+++++++++
T Consensus 77 ------------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l 137 (368)
T TIGR00903 77 ------------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKI 137 (368)
T ss_pred ------------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1678899999999999986 4566666799999877 99999999999999999999999999
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 195 QDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 195 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
.+.+|||+.|++.+++.++..+++....|
T Consensus 138 ~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 138 YTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999998876665554444444333
No 20
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.93 E-value=6e-24 Score=231.79 Aligned_cols=176 Identities=15% Similarity=0.101 Sum_probs=130.6
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHH-HHH-----HHHHHhHhhhhchhhhhhhhhhccchhHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTK-AAN-----TLTNFGGTGSLTPLIGAFVADTYAGRFWTITV 89 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~-~~~-----i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~ 89 (577)
++......+..+++.+.+. +..+...++.++++.+.++ ..+ +.++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4444444456666665544 4556667888887543322 122 24667788999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 169 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (577)
+++++.++++++++++++.. ........+++.|+++|+|.|+..++..++++|++|+++ |
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~--------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------R 152 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYAT--------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------R 152 (490)
T ss_pred HHHHHHHHHHHHHhcccHHH--------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------C
Confidence 99999999999998762211 000011247899999999999999999999999999888 9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhc--------ccccchhhhHHHHHHHHH
Q 008096 170 WKYFNWYYFVMGAAVLVAVTVLVYIQ--------DNVGWNWGLGIPTVAMFL 213 (577)
Q Consensus 170 ~~~~~~~~~~~~ig~~lg~~i~~~l~--------~~~gw~~~f~~~~~~~~~ 213 (577)
+++.++...+..+|..+|+.+...+. ..+|||+.|++.++..++
T Consensus 153 g~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 153 GFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 99999988888888888876654432 257999999987665443
No 21
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=1.4e-23 Score=223.02 Aligned_cols=378 Identities=13% Similarity=0.064 Sum_probs=243.6
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHH-----HHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTK-----AANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~-----~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
...+....++..++.....+++|.|.+ ++|.+..+ .+++.+.+.++..+++++.|+++||+ |||+.+..+.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 93 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHH
Confidence 444445777788888888889999885 58888655 48889999999999999999999998 999999999998
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
..++.+++.++. +++.+++.|++.|++.+ ..+...+++.|.+|+++ |+++.
T Consensus 94 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~ 144 (408)
T PRK09874 94 MGIVMVLMGLAQ----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWAL 144 (408)
T ss_pred HHHHHHHHHHHh----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHH
Confidence 888888877765 67889999999999865 46788888999998877 89999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccC
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDM 253 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (577)
++++.+.++|..++|.+++.+.+.++|++.|++.++..++..+......++.+..+++++ ..+..+
T Consensus 145 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------- 210 (408)
T PRK09874 145 GTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-MLHMRE------------- 210 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-hhHHHH-------------
Confidence 999999999999999999999888899999988887766555544443332111000000 000000
Q ss_pred CCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhH-HHHHHHHHH
Q 008096 254 VSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPI-WASGILLIT 332 (577)
Q Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l-~~~~~~~~~ 332 (577)
. + +..++.+........ .........
T Consensus 211 ------------------------------~------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 211 ------------------------------V------------------V-----TSLKNPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred ------------------------------H------------------H-----HhCcCCchHHHHHHHHHHHHHHHHH
Confidence 0 0 000011111101110 010111000
Q ss_pred HhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHH
Q 008096 333 AYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLA 412 (577)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~ 412 (577)
.....+.+..... .... ......+.+.....+..++..+..++ +.||.++|+. +..+..+..++
T Consensus 238 ~~~~~~~~~~~~~----~~~~-~~~~~~g~~~~~~~l~~~~~~~~~g~----l~dr~g~~~~-------~~~~~~~~~~~ 301 (408)
T PRK09874 238 IAPILTLYVRELA----GNVS-NIAFISGMIASVPGVAALLSAPRLGK----LGDRIGPEKI-------LITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHh----ccch-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHhccccchh-------HHHHHHHHHHH
Confidence 0000000100000 0000 00000122223333444455555444 6666655443 55565555555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHH
Q 008096 413 TLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIG 492 (577)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg 492 (577)
++...... +.+.+.+..++.+++.+...+.....+.+..|++.+|+.+|+.+....+|
T Consensus 302 ~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 359 (408)
T PRK09874 302 LIPMSFVQ----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIG 359 (408)
T ss_pred HHHHHHhc----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHH
Confidence 44433322 34444556677888888889998888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008096 493 NYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAK 549 (577)
Q Consensus 493 ~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 549 (577)
..+++.+.+.+.+.. ++...|++.+++.+++.+..++..+
T Consensus 360 ~~~gp~~~G~l~~~~-----------------g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 360 NVTGPLMGAAISANY-----------------GFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHhhHHHHHHHHhhc-----------------chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999875533 2345577777777777766655443
No 22
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1e-23 Score=224.83 Aligned_cols=181 Identities=13% Similarity=0.093 Sum_probs=150.5
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
|.+|+.++...+..+++..... ...+....+++++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++..+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRI-NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhh-hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 4456655555555555544444 444455589999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++.+++++++ +.+.+++.|++.|++.+...|...+++.|++|+++ |+++
T Consensus 82 ~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~ 133 (412)
T TIGR02332 82 LWGIASTATMFAT----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARA 133 (412)
T ss_pred HHHHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHH
Confidence 9999999999876 67789999999999999999999999999999777 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcc------cccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQD------NVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
.++++.+..+|..+++.+++++.+ ..|||+.|++.++..++..++..+..|
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999988763 369999999987766554444433333
No 23
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.93 E-value=3e-24 Score=237.63 Aligned_cols=335 Identities=27% Similarity=0.480 Sum_probs=268.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 008096 31 LAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQL 110 (577)
Q Consensus 31 ~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~ 110 (577)
+++|++.+.+..|+.+.+|++.+++..+...+.....+.++++|+++|++.||++++.++.+++.+|..+++++. .|..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 468999999999999999999999999999999999999999999999999999999999999999999988754 2210
Q ss_pred CCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 008096 111 RPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTV 190 (577)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i 190 (577)
.........+++..+.++|.|+..|+..+..+|++++++.++ |.++++++|++.|+|+++++++
T Consensus 80 -------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~---~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 80 -------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSL---RSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred -------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 011234557788999999999999999999999998654333 8889999999999999999999
Q ss_pred HHhhccc-------ccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccc
Q 008096 191 LVYIQDN-------VGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQN 263 (577)
Q Consensus 191 ~~~l~~~-------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (577)
.+++.++ .+|..+|.+++++++++++++...++++++.+|.+++..+..+++..+.+++....++.
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~------- 216 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH------- 216 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc-------
Confidence 9998744 36999999999999999998888888777777777777776666666665432211100
Q ss_pred cchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEe
Q 008096 264 EELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQ 343 (577)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 343 (577)
...+++|.+.... ..+.++++|++++.+++++..+.+|..+.|+.+.+..
T Consensus 217 ----------------~~~~~ld~a~~~~--------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~ 266 (654)
T TIGR00926 217 ----------------WPLHWLDYAKDKH--------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTL 266 (654)
T ss_pred ----------------cchhHHHHhcccc--------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 0012333221110 1234567889999999999999999999999988788
Q ss_pred eccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008096 344 QAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKR 423 (577)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~ 423 (577)
|+..++.+++ ++.+++.++..++++.+++..|++++.+.|..+|.+.+ .+++.++.+|+++.++++.++...+.+.
T Consensus 267 qa~~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~~ 342 (654)
T TIGR00926 267 QATRMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLKV 342 (654)
T ss_pred HHHHhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777765 67889999999999999999999987777777665432 3789999999999999998888876554
No 24
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=1.2e-23 Score=229.60 Aligned_cols=400 Identities=13% Similarity=0.017 Sum_probs=243.5
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ 95 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (577)
|..+..+....++..+..-.+..-+| .+.+++|.+.++.+|+.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 44444444455555555444444444 45678999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCC-CCCchhhhhhhhhhh
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFD-ETDPKQATKTWKYFN 174 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~ 174 (577)
++.++++++. +.+.++++|+++|+|.++..|...+.+.+.++ +++ |+++++
T Consensus 83 ~~~~~~~~a~----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~g 134 (495)
T PRK14995 83 LASLAAAFSP----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMALG 134 (495)
T ss_pred HHHHHHHHcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHHH
Confidence 9999999876 78889999999999999999988888888774 444 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHH------HHHHHHhh
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQ------VCVAAFRK 248 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 248 (577)
++....++|..+||.+++++.+.+|||+.|++.....++..++.....|+.+.++.++.+...... .+.....+
T Consensus 135 ~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~ 214 (495)
T PRK14995 135 VWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKT 214 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998777666555544444432221111111111000 00111111
Q ss_pred ccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhh-HHHHH
Q 008096 249 RNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGP-IWASG 327 (577)
Q Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-l~~~~ 327 (577)
.. +...+...... .-. .. ..+.......+.+...+..+++.++ .+....... .+...
T Consensus 215 ~~-~~~~~~~~~~~-~~~---------~~-----~~~l~~f~~~e~~~~~p~~~~~lf~------~~~~~~~~~~~~~~~ 272 (495)
T PRK14995 215 AL-KGFLSLWVTSL-TLL---------TG-----ALLLGLFIRTQLAASRPMIDMRLFT------HRIILSGVVMAMTAM 272 (495)
T ss_pred cc-ccCCchHHHHH-HHH---------HH-----HHHHHHHHHHHhcCCCCCcCHHHhC------CcccHHHHHHHHHHH
Confidence 00 00000000000 000 00 0000000001100111112222111 111111111 11111
Q ss_pred HHHHHHhhccceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHH
Q 008096 328 ILLITAYAQQGTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGF 406 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~ 406 (577)
..++......+. ++.... +++ ...+.......+...+..++.++ +.||+++|+. +..|+
T Consensus 273 ~~~~~~~~~~~~-------~lq~v~--g~s~~~ag~~~~~~~~~~~~~~~~~g~----l~~r~g~~~~-------~~~g~ 332 (495)
T PRK14995 273 ITLVGFELLMAQ-------ELQFVH--GLSPLEAGMFMLPVMVASGFSGPIAGI----LVSRLGLRLV-------ATGGM 332 (495)
T ss_pred HHHHHHHHHHHH-------HHHHHc--CCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHcCchHH-------HHHHH
Confidence 111111110011 111111 111 12333444444555566666554 6666654332 56677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH
Q 008096 407 VISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW 486 (577)
Q Consensus 407 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~ 486 (577)
++.++++.+..... ...+.+......++.|++.+...+.....+.+.+|++.++.+.++.+
T Consensus 333 ~~~~~~~~~l~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (495)
T PRK14995 333 ALSALSFYGLAMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIET 393 (495)
T ss_pred HHHHHHHHHHHHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHH
Confidence 77766665544332 11233344556788899999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhh
Q 008096 487 TANSIGNYVSTLLVTLVHKF 506 (577)
Q Consensus 487 ~~~~lg~~l~~~i~~~v~~~ 506 (577)
+.+.+|+.+|+.+.+.+.+.
T Consensus 394 ~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 394 MAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998653
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=1.7e-23 Score=221.77 Aligned_cols=358 Identities=13% Similarity=0.051 Sum_probs=229.8
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 008096 34 VGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPP 113 (577)
Q Consensus 34 ~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 113 (577)
+.+.+.+| .+++++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++..+.+++.++.+.+++++
T Consensus 26 ~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~-------- 95 (393)
T PRK09705 26 TSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP-------- 95 (393)
T ss_pred hccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc--------
Confidence 44444444 56789999999999999999999999999999999999 999999999999999999999977
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 008096 114 PCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVY 193 (577)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~ 193 (577)
+++.++++|+++|+|.+...+...+++.|++| ++ |+++.+.+..+.+.|..+|+.++++
T Consensus 96 --------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~~~~ 154 (393)
T PRK09705 96 --------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAITPW 154 (393)
T ss_pred --------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67779999999999999999999999999987 66 8999999999999999999999998
Q ss_pred hcccc-cchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccchhhhhhc
Q 008096 194 IQDNV-GWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEELDASICL 272 (577)
Q Consensus 194 l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 272 (577)
+.+.. +||+.+.+.++..++....+....++ +|+.+ ++++
T Consensus 155 l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------------------~~~~-------------- 195 (393)
T PRK09705 155 LVQHSETWYQTLAWWALPAVVALFAWWWQSAR----EVASS---------------------HKTT-------------- 195 (393)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCccc---------------------cCCC--------------
Confidence 87765 89988766555444333333222211 11100 0000
Q ss_pred CCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeecccccccc
Q 008096 273 DGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAKSMDRHL 352 (577)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (577)
..+.+.. .+.+.........+....++......+.+.. + ...+
T Consensus 196 ---------------------------~~~~~~l-----~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~-~-~g~s--- 238 (393)
T PRK09705 196 ---------------------------TTPVRVV-----FTPRAWTLGVYFGLINGGYASLIAWLPAFYI-E-IGAS--- 238 (393)
T ss_pred ---------------------------cCCcccc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-cCCC---
Confidence 0000000 0111111111111112222222222222211 0 0111
Q ss_pred ccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008096 353 TKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGL 432 (577)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~ 432 (577)
....+.......+..+++..+. +++.||.++|+. +.+++.+..+++.+.....
T Consensus 239 ----~~~ag~~~~~~~i~~i~g~~~~----g~l~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~------------ 291 (393)
T PRK09705 239 ----AQYSGSLLALMTLGQAAGALLM----PAMARHQDRRKL-------LMLALVLQLVGFCGFIWLP------------ 291 (393)
T ss_pred ----hhhhhHHHHHHHHHHHHHHHHH----HHHHhhccchHH-------HHHHHHHHHHHHHHHHHcc------------
Confidence 1113334444555555555554 446666554332 5566666666655443222
Q ss_pred CCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccC-cccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCC
Q 008096 433 VDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAP-ESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPN 511 (577)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P-~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~ 511 (577)
.+...+ ..++.+++.+...+.......+..| ++.+|+.+|+.+....++..++|.+.+++.|..+
T Consensus 292 ---------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g--- 357 (393)
T PRK09705 292 ---------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG--- 357 (393)
T ss_pred ---------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 111111 2244567777777777766667764 6889999999999999999999999999887652
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhccc
Q 008096 512 GSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYT 552 (577)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 552 (577)
++...|...+..+++..++.+.+.+|++
T Consensus 358 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 358 -------------NYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 1233455656666666666666655543
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=4.6e-23 Score=218.55 Aligned_cols=177 Identities=10% Similarity=0.121 Sum_probs=154.7
Q ss_pred cccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHH
Q 008096 10 NRKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITV 89 (577)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~ 89 (577)
.+.|..|+....+....++.....|...+.+|.+ .+++|+|.++.++..+.+.++..+++++.|+++||+ |||+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~ 90 (394)
T PRK10213 13 AITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVIL 90 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHH
Confidence 4557788877766666666666667777777664 568999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 169 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (577)
+.++..++.+.++++. +.+.+++.|+++|++.+...|...+++.|++|+++ |
T Consensus 91 ~~~~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~ 142 (394)
T PRK10213 91 FAVLLTLSCLLVSFAN----------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------V 142 (394)
T ss_pred HHHHHHHHHHHHHHHC----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------H
Confidence 9999999988888765 78889999999999999999999999999999877 9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHH
Q 008096 170 WKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 170 ~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~ 216 (577)
+++.++...+.++|..+||.+++++.+.+|||+.|++.++..++..+
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887765554433
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=2e-23 Score=220.73 Aligned_cols=175 Identities=11% Similarity=0.160 Sum_probs=152.7
Q ss_pred ccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHH
Q 008096 11 RKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVA 90 (577)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (577)
..+.+|+......+..+.+.+..+......+ .+++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 4467788877877888888887776666655 56789999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
.++..++.++++++. +++.+++.|++.|++.+...+...+++.|++|+++ |+
T Consensus 84 ~~~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~ 135 (405)
T TIGR00891 84 IVLFSAGTLACGFAP----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RN 135 (405)
T ss_pred HHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hh
Confidence 999999988888765 67889999999999999999999999999999887 99
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhccccc--chhhhHHHHHHHHHHH
Q 008096 171 KYFNWYYFVMGAAVLVAVTVLVYIQDNVG--WNWGLGIPTVAMFLSI 215 (577)
Q Consensus 171 ~~~~~~~~~~~ig~~lg~~i~~~l~~~~g--w~~~f~~~~~~~~~~~ 215 (577)
++.++++.+..+|..+++.+.+.+.+..+ |++.|++.++..++.+
T Consensus 136 ~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 136 KASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998877665 9999987665544443
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=2.4e-23 Score=216.74 Aligned_cols=358 Identities=13% Similarity=0.058 Sum_probs=235.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
.++...++..++.......+|.|.. +++.|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++..++.++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 3455677777777777777888776 5799999999999999999999999999999998 9999999999988888877
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
+++....+ ..+.+.+++.|+++|++.+...|...+++.|++|+++ |++++++.+.+.
T Consensus 81 ~~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 137 (365)
T TIGR00900 81 LPFVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVR 137 (365)
T ss_pred HHHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHH
Confidence 77654111 1267889999999999999999999999999999877 999999999999
Q ss_pred HHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhh-HHHHHHHHHHhhccccCCCCCcc
Q 008096 181 GAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFV-RLMQVCVAAFRKRNLDMVSDPNV 259 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 259 (577)
.+|.++||.+++++.+..||++.|++.++..+++.+.....+++.++++ +.++.+ +..+
T Consensus 138 ~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------------- 197 (365)
T TIGR00900 138 SLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-EIQALSNAVLR------------------- 197 (365)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-cccccchhHHH-------------------
Confidence 9999999999999998899999998887766655544443322111100 000000 0000
Q ss_pred cccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhH-HHHHHHHHHHh-hcc
Q 008096 260 LYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPI-WASGILLITAY-AQQ 337 (577)
Q Consensus 260 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l-~~~~~~~~~~~-~~~ 337 (577)
+ .. ..+ +...+.+.+...... ........... ...
T Consensus 198 -----~------------------~~---------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (365)
T TIGR00900 198 -----D------------------TR---------------EGI-----KFVLKNPLLRTLLLLALLFNLVFAPAIVALF 234 (365)
T ss_pred -----H------------------HH---------------hHH-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 000 000011111111111 11111111111 111
Q ss_pred ceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008096 338 GTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAG 417 (577)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~ 417 (577)
+.+ .....+ ......+.+.....+..++..++.+ ++.||.++++ .+..+..+.+++++...
T Consensus 235 ~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~-------~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 235 PYV-------QSKYLG-RGSTHYGWVLAAFGLGALLGALLLG----LLGRYFKRMA-------LMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHH-------HHHHhC-CchHHHHHHHHHHHHHHHHHHHHHH----HHHHHhchhH-------HHHHHHHHHHHHHHHHH
Confidence 111 111111 0001123333334444455555544 4555554332 24555555555555544
Q ss_pred HHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHH
Q 008096 418 FVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVST 497 (577)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~ 497 (577)
... + +.+...+..++.+++.+...+..+.++.+..|++.||++.|+.++...++..+++
T Consensus 296 ~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~ 354 (365)
T TIGR00900 296 LTP--------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGL 354 (365)
T ss_pred hhc--------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433 1 2445566678889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh
Q 008096 498 LLVTLVHKF 506 (577)
Q Consensus 498 ~i~~~v~~~ 506 (577)
.+.+.+.|.
T Consensus 355 ~~~g~l~~~ 363 (365)
T TIGR00900 355 ILAGPLADH 363 (365)
T ss_pred HHHHHHHHH
Confidence 999987664
No 29
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=6.7e-23 Score=214.94 Aligned_cols=169 Identities=10% Similarity=0.060 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHH-HHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITV-ASIIYQIGMFSL 101 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~-~~~~~~i~~~~~ 101 (577)
+...++..++.....+.++.|+++++|.|..+.+++.+.+.+...+.+++.|+++||+ ||||.++. +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3457778888888899999999999999999999999999999999999999999998 98887654 555555666677
Q ss_pred HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhh--hhhHHHHH
Q 008096 102 TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK--YFNWYYFV 179 (577)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~ 179 (577)
+++. +++.+++.|++++.+.+...|...++..|..|+++ |.+ ..+..+.+
T Consensus 82 ~~~~----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 133 (375)
T TIGR00899 82 AWNR----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQ 133 (375)
T ss_pred Hhcc----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHH
Confidence 7654 67778888999888888888888888888877544 443 36777788
Q ss_pred HHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 180 MGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
.++|..+||.+++++.+.+|||+.|++.++..++..+...+
T Consensus 134 ~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998899999999988776655554444
No 30
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.1e-22 Score=208.97 Aligned_cols=183 Identities=13% Similarity=0.110 Sum_probs=165.7
Q ss_pred ccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHH
Q 008096 11 RKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVA 90 (577)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (577)
..+..|..++.+-+..|+....=+.....+|. +.+++|.|..++|+.++.|.++..++.++...+.||+ .||+.++..
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~ 84 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGL 84 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHH
Confidence 34455666666666777777777777777765 5579999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
+.++.++.++++++. |++.+.++|++.|+..|.+++...++.+++.|+++ |+
T Consensus 85 l~lFi~~n~l~alAp----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~ 136 (394)
T COG2814 85 LALFIVSNLLSALAP----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RG 136 (394)
T ss_pred HHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hh
Confidence 999999999999988 88999999999999999999999999999999998 99
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 171 KYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 171 ~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
++.++...+..++..+|..++.++.+.+|||.+|++.+...++.++..+...|
T Consensus 137 ~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 137 RALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999888888777776666
No 31
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=8.6e-24 Score=229.20 Aligned_cols=178 Identities=10% Similarity=-0.001 Sum_probs=138.1
Q ss_pred ehHHHHHHHHHHHHHHHH---HHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGF---HANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ 95 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (577)
.+.++...++.....|.. .....+.+.+++|+|.++.+++.+.+.+++.+++++.|+++||+ |||+++.+++++..
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 105 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHH
Confidence 343444444443333432 22334567789999999999999999999999999999999999 99999999988888
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
++.+.+++... . ...+.+.+++.|++.|++.+...|...++++|++|+++ |++++++
T Consensus 106 ~~~~~~~~~~~-~----------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi 162 (467)
T PRK09556 106 ICMLGFGASLG-S----------------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGF 162 (467)
T ss_pred HHHHHHHHHHh-c----------------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEe
Confidence 77776665310 0 01278889999999999999999999999999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc---cchhhhHHHHHHHHHHHHHHHH
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNV---GWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
+..+.++|.++++.+..++.+.+ +|+..|.+.++..++..+++++
T Consensus 163 ~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 163 WNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred eecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998887765543 5888887766655444343333
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=1.2e-23 Score=219.80 Aligned_cols=338 Identities=12% Similarity=0.069 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008096 33 VVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRP 112 (577)
Q Consensus 33 ~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 112 (577)
.|. ...+.+++.+++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 19 ~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------- 89 (377)
T TIGR00890 19 VYT-WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------- 89 (377)
T ss_pred Hhh-hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-------
Confidence 444 44556778889999999999999999999999999999999998 999999999999999999999877
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 113 PPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
+.+.+++.|++.|++.+...+.....+.+++| ++ |+++.++...+.++|..+++.+.+
T Consensus 90 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~ 147 (377)
T TIGR00890 90 ---------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLIT 147 (377)
T ss_pred ---------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHH
Confidence 78889999999999999888888888888887 44 889999999999999888777777
Q ss_pred hhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccchhhhhhc
Q 008096 193 YIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEELDASICL 272 (577)
Q Consensus 193 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 272 (577)
.+.+..|||+.|++.++..++..+......++.++++.+. +.+. + .
T Consensus 148 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~---~-----~--------- 193 (377)
T TIGR00890 148 SVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKT-----------------NIEV---S-----V--------- 193 (377)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhcccc-----------------Cccc---c-----h---------
Confidence 7777789999999888776555444433322211100000 0000 0 0
Q ss_pred CCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeecccccccc
Q 008096 273 DGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAKSMDRHL 352 (577)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (577)
+. ...+ +..++++........................+ . .+.
T Consensus 194 -------~~------------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~ 235 (377)
T TIGR00890 194 -------KD------------------YTVW-----EMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPY-------G-QSL 235 (377)
T ss_pred -------hh------------------hhHH-----HHHcCccHHHHHHHHHHHhHHHHHHHHHHHHH-------H-HHc
Confidence 00 0000 00001111111111111111110000000000 0 011
Q ss_pred ccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008096 353 TKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHG 431 (577)
Q Consensus 353 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~ 431 (577)
+.+ ...+.+.....+..++..++.++ +.||+++|+. +.++.++.++++++.....
T Consensus 236 --~~~~~~~~~~~~~~~~~~~~~~~~~g~----l~dr~g~~~~-------~~~~~~~~~~~~~~~~~~~----------- 291 (377)
T TIGR00890 236 --GLSDGFLVLAVSISSIFNGGGRPFLGA----LSDKIGRQKT-------MSIVFGISAVGMAAMLFIP----------- 291 (377)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhhhhh-------hhHHHHHHHHHHHHHHHcc-----------
Confidence 111 11233444455555666666555 5566554433 5666666666665544332
Q ss_pred CCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Q 008096 432 LVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKF 506 (577)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~ 506 (577)
..+....+...++.+++.+...+....++.|..|++.|+++.|+.+....+|..+++.+.+.+.+.
T Consensus 292 ---------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 292 ---------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred ---------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 112222233345556666666666777889999999999999999999999999999999987653
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=3.7e-23 Score=216.95 Aligned_cols=158 Identities=13% Similarity=0.171 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 008096 36 FHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPC 115 (577)
Q Consensus 36 ~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (577)
......+++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++..+++++.
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~---------- 80 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG---------- 80 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc----------
Confidence 334445568889999999999999999999999999999999998 999999999999999999888876
Q ss_pred CCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc
Q 008096 116 QGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ 195 (577)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~ 195 (577)
+++.+++.|++.|++.+...+...+++.|.+|+++ |++++++.+...++|..+++.+.+++.
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~ 142 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWIL 142 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999877 999999999999999999999999988
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 196 DNVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 196 ~~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
+..+|++.|++.++..++..+......
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 143 IHFSWQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HhCCchHHHHHHHHHHHHHHHHhhhee
Confidence 889999999888776655555444433
No 34
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=6.7e-23 Score=219.97 Aligned_cols=168 Identities=17% Similarity=0.181 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHhHhh---hhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLH---MPLTKAANTLTNFGGTG---SLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg---~s~~~~~~i~~~~~~~~---~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
..+++.+... ..++...++.++++ .+..+.+.+.+.+..+. .++++++|+++||+ |||+++..+.+++.+++
T Consensus 30 ~~~~~~~d~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~ 107 (432)
T PRK10406 30 GNLVEWFDFY-VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGS 107 (432)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 3555555544 46677778888874 56665555444444444 49999999999999 99999999999999999
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
++++++.++.. ....+...+++.|+++|++.|+..|...++++|++|+++ |+++.++.+.
T Consensus 108 ~~~~~~~~~~~--------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~ 167 (432)
T PRK10406 108 LVIACLPGYET--------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYV 167 (432)
T ss_pred HHHhhcCCchh--------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHH
Confidence 99998652211 001134568899999999999999999999999999888 9999999888
Q ss_pred HHHHHHHHHHHHHHhhc--------ccccchhhhHHHHHHHHHH
Q 008096 179 VMGAAVLVAVTVLVYIQ--------DNVGWNWGLGIPTVAMFLS 214 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~--------~~~gw~~~f~~~~~~~~~~ 214 (577)
+.+.|.++++++...+. +.+|||++|++.++..++.
T Consensus 168 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 168 TLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 88888888887655543 2579999999877765543
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=3.9e-23 Score=223.92 Aligned_cols=149 Identities=9% Similarity=0.105 Sum_probs=131.2
Q ss_pred hcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccc
Q 008096 47 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADT 126 (577)
Q Consensus 47 ~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (577)
++++|..+.|++.+.+.+++.++++++|+++||+ |||+++..+.++..++.+++.++. .
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------~ 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------G 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH--------------------H
Confidence 6899999999999999999999999999999998 999999999999888887776543 0
Q ss_pred chhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccc-cchhhhH
Q 008096 127 GQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNV-GWNWGLG 205 (577)
Q Consensus 127 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~-gw~~~f~ 205 (577)
.+...+++.|+++|++.+...|....+++|++|+++ |+++.++.+.+.++|..+++.+++++.+.+ ||++.|+
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~ 202 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFY 202 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehh
Confidence 145678999999999999999999999999999888 999999999999999999999999998884 9999999
Q ss_pred HHHHHHHHHHHHHHHcc
Q 008096 206 IPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 206 ~~~~~~~~~~~~~~~~~ 222 (577)
+.++..++..++++...
T Consensus 203 i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 203 VFGIVGCAWSLLWFVFP 219 (465)
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 98887665555544443
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=7.7e-24 Score=219.45 Aligned_cols=170 Identities=16% Similarity=0.314 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLT 102 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 102 (577)
+...++..+......+.++.++.+++|.|.++.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4456667777777777777788899999999999999999999999999999999998 999999999999999966666
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHH
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 182 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 182 (577)
++. +.+.+++.|++.|++.+...+...+++.|++|+++ |++++++.+...++
T Consensus 81 ~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 132 (352)
T PF07690_consen 81 FAS----------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSL 132 (352)
T ss_dssp HHC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHH
T ss_pred hhh----------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhh
Confidence 543 56689999999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHc
Q 008096 183 AVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 183 g~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
|..++|.+++++.+.+||++.|++.++..++..++....
T Consensus 133 g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~ 171 (352)
T PF07690_consen 133 GSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILF 171 (352)
T ss_dssp HHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCC
T ss_pred hhhcccchhhhhhhccccccccccccchhhhhhhhHhhh
Confidence 999999999999988999999999998877776643333
No 37
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.92 E-value=3.7e-23 Score=221.22 Aligned_cols=168 Identities=13% Similarity=0.153 Sum_probs=146.6
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+.+|+......+..+.+.+..+.. .++..++++++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 455666666666666666666555 4444567789999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++.++++++. +.+.++++|+++|++.+...+...+++.|++|+++ |+++
T Consensus 92 ~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~ 143 (426)
T PRK12307 92 AYSVGTGLSGLAS----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKA 143 (426)
T ss_pred HHHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHh
Confidence 9999999988876 67889999999999999999999999999999887 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVA 210 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~ 210 (577)
.++++.+..+|.++++.+.+.+.+.+|||+.|++....
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999999998889999999875543
No 38
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=2.2e-23 Score=224.80 Aligned_cols=145 Identities=18% Similarity=0.302 Sum_probs=125.2
Q ss_pred CChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchh
Q 008096 50 MPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQL 129 (577)
Q Consensus 50 ~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (577)
.+..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++.+++.++.+ ..+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 127 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF-------------------ALSV 127 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc-------------------ccch
Confidence 3389999999999999999999999999998 9999999999999999888876541 1245
Q ss_pred HHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH---HhhcccccchhhhHH
Q 008096 130 AILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL---VYIQDNVGWNWGLGI 206 (577)
Q Consensus 130 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~---~~l~~~~gw~~~f~~ 206 (577)
+.++++|+++|+|.+...+...++++|++|+++ |+++.++++.+.++|..+++.++ +...+..+||+.|++
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 678999999999999999999999999999888 99999999999999999999998 676677899999998
Q ss_pred HHHHHHHHHHHHHH
Q 008096 207 PTVAMFLSIIAFVF 220 (577)
Q Consensus 207 ~~~~~~~~~~~~~~ 220 (577)
.++..++..+..++
T Consensus 202 ~~~~~~~~~~~~~~ 215 (481)
T TIGR00879 202 QLIPAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHHHHHHhc
Confidence 66655554444333
No 39
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=9.4e-23 Score=220.15 Aligned_cols=157 Identities=14% Similarity=0.090 Sum_probs=126.8
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
.+..+|+.++ |+|..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++.+.++++...
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~---------- 116 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA---------- 116 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc----------
Confidence 3444577777 99999999999999999999999999999998 99999999999999988888875311
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHH-HHHHHHHhhcc
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVL-VAVTVLVYIQD 196 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-lg~~i~~~l~~ 196 (577)
+.+.+.+++.|++.|++.+...|...+.+.|++|+++ |++++++++.+.++|.. .+|+++..+..
T Consensus 117 --------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 117 --------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred --------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 1256778899999999999999988899999999877 99999999999999864 45554433333
Q ss_pred cccchhhhHHHHHHHHHHHHHHHH
Q 008096 197 NVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 197 ~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
..|||+.|++.++..++..++..+
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHH
Confidence 458999999887765554444333
No 40
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.3e-22 Score=215.87 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=143.1
Q ss_pred CcceehHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHH
Q 008096 15 GIITMPFIFANEVCEK---LAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVAS 91 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (577)
|.+..+..+...++.. ++...+.+.++. +.+++|.|..+.++..+.+.++..+++++.|+++||+ |||+.+.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHH
Confidence 3333444444444433 344455555554 4578999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhh
Q 008096 92 IIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 171 (577)
Q Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 171 (577)
++..++.+++.++. +.+.+++.|+++|++.+...+...+++.|.+|+++ |.+
T Consensus 86 ~~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~ 137 (406)
T PRK15402 86 AFFILTCLAILLAQ----------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIK 137 (406)
T ss_pred HHHHHHHHHHHHHc----------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHH
Confidence 99999888888765 67778999999999999988999999999999877 788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 172 YFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 172 ~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
..++.+....+|..++|.+++++.+..+|++.|++.++..++..+....
T Consensus 138 ~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 138 ITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999988889999998877776665554443
No 41
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=8.4e-23 Score=221.79 Aligned_cols=177 Identities=8% Similarity=0.025 Sum_probs=138.5
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+++++.+.......++..+..+...+.++ ++.+++|+|.++.+++.+.+.+++.+++++.|+++||+ |||+++.++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~ 109 (476)
T PLN00028 32 RPHMRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLM 109 (476)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 45555666555566666666665554444 66789999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++.++++++. +...+++.|+++|++.+... ....+++|++|+++ |+++
T Consensus 110 ~~~~~~~~~~~~~----------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a 160 (476)
T PLN00028 110 LTAPAVFCMSLVS----------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTA 160 (476)
T ss_pred HHHHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHH
Confidence 9999988888766 67778899999999988654 45667899999887 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcc---------cccchhhhHHHHHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQD---------NVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~---------~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
+++.+...++|..+++.+.+.+.. ..|||+.|++.+++.++..+...+
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999888778888777666554421 258999999888776555444443
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=8.7e-23 Score=221.98 Aligned_cols=394 Identities=13% Similarity=0.145 Sum_probs=239.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLT 102 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 102 (577)
....++..+........ .+++.+++|.|.++.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 8 MLGTFMAVLDSTIVNVA-IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHh
Confidence 33444454544444444 4556678999999999999999999999999999999998 999999999999999999988
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHH
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 182 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 182 (577)
++. +...+++.|+++|++.+...+...+++.|.+|+++ |+++.++++.+..+
T Consensus 86 ~~~----------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~ 137 (485)
T TIGR00711 86 VAP----------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVLV 137 (485)
T ss_pred CcC----------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHH
Confidence 765 67889999999999999999999999999999777 99999999999999
Q ss_pred HHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHH-HH-----HHHHHHhhccccCCCC
Q 008096 183 AVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRL-MQ-----VCVAAFRKRNLDMVSD 256 (577)
Q Consensus 183 g~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~ 256 (577)
|..+||.+++++.+++|||+.|++.++..++..++..+..++.++++..+.+.... .. .+.....+.+..
T Consensus 138 g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~---- 213 (485)
T TIGR00711 138 APALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPER---- 213 (485)
T ss_pred HhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCC----
Confidence 99999999999999999999999887766655555444444322111111111100 00 000011111000
Q ss_pred CcccccccchhhhhhcCCcccccccchhh-hhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhh
Q 008096 257 PNVLYQNEELDASICLDGKLLHTKHMKFL-DKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYA 335 (577)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~ 335 (577)
.+......... ...... -......+.++.++..+++. .++++........+.....++....
T Consensus 214 -~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T TIGR00711 214 -GWFDSNEILIL-----------SITGLVAIIAFVVWELTDDNPLVDLRL-----FKYRNFTIGCVYMSLLGLGLYGSFY 276 (485)
T ss_pred -CCCCchHHHHH-----------HHHHHHHHHHHHHHHHcCCCCccCHHH-----HcCCChHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 000000 00000000001111111111 1111111111111111111111111
Q ss_pred ccceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHH
Q 008096 336 QQGTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATL 414 (577)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~ 414 (577)
..+.+ ..... +++ ...+.......+..+++.++.++ +.||.++|+ .+.+|..+.++++.
T Consensus 277 ~~p~~-------~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~g~----l~~r~~~~~-------~~~~g~~~~~~~~~ 336 (485)
T TIGR00711 277 LLPLY-------LQQVL--GYTALQAGLHILPVGLAPMLSSPIAGR----MGDKIDPRK-------LVTIGLILYAVGFY 336 (485)
T ss_pred HHHHH-------HHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhcCcHH-------HHHHHHHHHHHHHH
Confidence 11111 11111 111 11334444455555666666554 555654332 26677777777666
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHH
Q 008096 415 VAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNY 494 (577)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~ 494 (577)
+..... ....+.+......++.+++.+...+.......+..|++.+|+++|+.++.+.+|+.
T Consensus 337 ~~~~~~------------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 398 (485)
T TIGR00711 337 WRAFTF------------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS 398 (485)
T ss_pred HHhccC------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH
Confidence 554211 01234444555677889998888888888888899999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 008096 495 VSTLLVTLVHK 505 (577)
Q Consensus 495 l~~~i~~~v~~ 505 (577)
+++.+.+.+.+
T Consensus 399 ig~~i~g~~~~ 409 (485)
T TIGR00711 399 IGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHH
Confidence 99999988765
No 43
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=3.9e-23 Score=223.21 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=129.0
Q ss_pred HHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcc
Q 008096 42 SYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVC 121 (577)
Q Consensus 42 ~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (577)
..+.+++|.|.++.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.+.+++++
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 445679999999999999999999999999999999998 999999999999999988888866
Q ss_pred cccccchhHHHHH-HHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 008096 122 KEADTGQLAILYA-SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGW 200 (577)
Q Consensus 122 ~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw 200 (577)
+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+..+|..++|.+++++.+.+||
T Consensus 106 ------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 106 ------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred ------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 5555654 5688999999877777888889885 45 89999999999999999999999999998999
Q ss_pred hhhhHHHHHHHHHHHHHHHHcc
Q 008096 201 NWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 201 ~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
|++|++.+++.++..+..++..
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998887666555444443
No 44
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=3.6e-22 Score=211.67 Aligned_cols=174 Identities=11% Similarity=0.135 Sum_probs=145.4
Q ss_pred CCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 14 GGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
+|||..+...+..++.....+.+-..+|. +.+++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 45666666666666666665555555555 5678999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
..++.++++++. +.+.+++.|+++|++.+...+...+++.|.+|+++ |+++.
T Consensus 82 ~~i~~~l~~~~~----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~ 133 (394)
T PRK03699 82 MILAVAGLMFSH----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRL 133 (394)
T ss_pred HHHHHHHHHHcc----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHH
Confidence 999988888765 67788999999999999999999999999998777 88889
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc-ccccchhhhHHHHHHHHHHHHH
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQ-DNVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~-~~~gw~~~f~~~~~~~~~~~~~ 217 (577)
+..+....+|..++|.+.+++. +..|||+.|.+.++..++..+.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999888765 4579999998877665544433
No 45
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.5e-23 Score=221.08 Aligned_cols=376 Identities=15% Similarity=0.198 Sum_probs=252.1
Q ss_pred hcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccc
Q 008096 47 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADT 126 (577)
Q Consensus 47 ~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (577)
++++|.+|.+++.+.+..|+.++++++|+++||| |-|+++.++.++.++++++.+++...
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------------------- 126 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------------------- 126 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 5889999999999999999999999999999999 99999999999999999999998732
Q ss_pred chhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc-ccchhhhH
Q 008096 127 GQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN-VGWNWGLG 205 (577)
Q Consensus 127 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~-~gw~~~f~ 205 (577)
+.+.+++.|+++|++.|...|+...+.+++.|++| |++..++.+.+..+|.+++..+.|++.+. +||++.|+
T Consensus 127 -~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY 199 (466)
T KOG2532|consen 127 -GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFY 199 (466)
T ss_pred -cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHH
Confidence 33467999999999999999999999999999999 99999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhh
Q 008096 206 IPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFL 285 (577)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 285 (577)
+.++..++..++++......+.+++.-++... +++
T Consensus 200 ~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El---------------------------------------------~~I 234 (466)
T KOG2532|consen 200 VFGIVGLIWFILWFLFYSDSPSKHPNISEKEL---------------------------------------------KYI 234 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCHHHH---------------------------------------------HHH
Confidence 99998888777776665433332222211110 000
Q ss_pred hhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeecccccccccccccc-ccchhh
Q 008096 286 DKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQI-PAGSMS 364 (577)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 364 (577)
+.....++. ..+...||+ .+++..+++..-+..++-......+..+.+.+++..+ ++++ .++.+.
T Consensus 235 ~~~k~~~~~-~~~~~vP~~-----------~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL--~f~v~~~G~~s 300 (466)
T KOG2532|consen 235 EKGKSEAHV-KKKPPVPYK-----------AILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL--GFDVRETGFLS 300 (466)
T ss_pred Hhccccccc-CCCCCCCHH-----------HHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh--CCChhhhhHHH
Confidence 000000000 111355664 2222222222211111111111112233344455444 5555 477888
Q ss_pred hhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccc
Q 008096 365 VFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRM--GIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPI 442 (577)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~--~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (577)
+++.+...+...+.+.+.|++..| . .+.+..+|+ .++....++.++++++.. ..
T Consensus 301 alP~l~~~~~k~~~g~lsD~l~~~-~---ls~t~~rkifn~i~~~~~ai~l~~l~~~~--------------------~~ 356 (466)
T KOG2532|consen 301 ALPFLAMAIVKFVAGQLSDRLTFR-I---LSETTVRKIFNTIAFGGPAVFLLVLAFTS--------------------DE 356 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-c---CchHhHHHHHHhHHHHHHHHHHHeeeecC--------------------CC
Confidence 888888888888877766666554 1 111333333 555666666666655543 11
Q ss_pred hhhHHHHHHHHHHHHHH-HHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCC
Q 008096 443 SVLWLVPQYSLHGIAEA-FMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNL 521 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~-~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~ 521 (577)
+. +..+..+..+.+.. +..+..+.-..+.+| +.-+..+|+.+....+.++++|++++.+.. . +
T Consensus 357 ~~-~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~------------~- 420 (466)
T KOG2532|consen 357 HR-LLAVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT-D------------N- 420 (466)
T ss_pred cc-hHHHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C------------C-
Confidence 11 11111222222222 233333333333356 557999999999999999999999887642 1 1
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHhhhh
Q 008096 522 NKGKLEYFYWLITLLQVVNVIYYFFCA 548 (577)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~i~~~~~~ 548 (577)
+...+..+|++.+++.+++.+++.++.
T Consensus 421 t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 421 TREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred CHHHHHHHHHHHHHHHHHhchheeEee
Confidence 334567789999999999998888875
No 46
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=4.3e-22 Score=210.18 Aligned_cols=174 Identities=13% Similarity=0.130 Sum_probs=149.1
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
+.++.+....+......+...+.+|. +++++|.|.++.+++.+.+.++..+++++.|+++||+ |||+++.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 33445555666666776777777765 5578999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+.++++++. +++.+++.|++.|++.+...+...+++.|++|+++ |+++.+.+
T Consensus 81 ~~~l~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 132 (382)
T PRK10091 81 GNAMFTLSS----------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGM 132 (382)
T ss_pred HHHHHHHhC----------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHH
Confidence 999998876 78889999999999999988888999999998766 88899999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
..+..+|..++|.+++++.+..|||++|++.++..++..+....
T Consensus 133 ~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 133 VSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998899999999888766555444333
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.91 E-value=1.2e-22 Score=221.72 Aligned_cols=169 Identities=12% Similarity=0.176 Sum_probs=145.0
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+.+|+.+..+....++..+..+.+. .+..++.+++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4556655555556666656555444 444567789999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++.+.++++. +++.+++.|++.|++.++..+...+++.|.+|+++ |+++
T Consensus 94 ~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~ 145 (496)
T PRK03893 94 LFSVGTLACGFAP----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKA 145 (496)
T ss_pred HHHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 9999999888876 67889999999999999999999999999999877 8999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAM 211 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~ 211 (577)
.++++.+.++|..++|.+.+++.+.+|||+.|++..+..
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999998755443
No 48
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=1e-22 Score=222.96 Aligned_cols=147 Identities=17% Similarity=0.242 Sum_probs=129.9
Q ss_pred HHHHHhcCCC---hHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCC
Q 008096 42 SYLTTQLHMP---LTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGD 118 (577)
Q Consensus 42 ~~l~~~lg~s---~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 118 (577)
..+.+++|++ ..+.+++.+++.++..+++++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3466789998 99999999999999999999999999998 999999999999999998888876
Q ss_pred CcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccc
Q 008096 119 QVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNV 198 (577)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~ 198 (577)
+++.+++.|++.|++.++..+...+++.|++|+++ |+++.++...+..+|.++++.++..+.+
T Consensus 179 ---------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 241 (505)
T TIGR00898 179 ---------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD-- 241 (505)
T ss_pred ---------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 78889999999999999999999999999999888 9999999988999999999988766643
Q ss_pred cchhhhHHHHHHHHHHHHHHHH
Q 008096 199 GWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 199 gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
||+.|++.++..++..+..++
T Consensus 242 -wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 242 -WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred -HHHHHHHHHHHHHHHHHHHHh
Confidence 999998888776665555443
No 49
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.7e-23 Score=209.85 Aligned_cols=411 Identities=12% Similarity=0.057 Sum_probs=264.2
Q ss_pred ccCCCcceehHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHH
Q 008096 11 RKKGGIITMPFIFANEVCEKLAVVGFHAN---MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTI 87 (577)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~ 87 (577)
.++.+.|.-+.++...++....+|.+.-. ..+++.++.++|.+|.|.+.+.+.+++.++-.+.|.++||. +.|+.+
T Consensus 19 ~~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm 97 (448)
T COG2271 19 IDKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceee
Confidence 34556666667777888888888877544 46788899999999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhh
Q 008096 88 TVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 167 (577)
Q Consensus 88 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (577)
.+++++.++..+++.+++ +.+.+.+..++.|..+|.-.|.+...++.++|.+|
T Consensus 98 ~~gLilsai~nil~Gfs~----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e----- 150 (448)
T COG2271 98 AFGLILSAIVNILFGFSP----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE----- 150 (448)
T ss_pred hHHHHHHHHHHHHHhhhh----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc-----
Confidence 999999999999999987 77889999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHH--HhhcccccchhhhHHHHHHHHHH-HHHHHHccccccccCCCCChhhHHHHHHHH
Q 008096 168 KTWKYFNWYYFVMGAAVLVAVTVL--VYIQDNVGWNWGLGIPTVAMFLS-IIAFVFGYPLYRNLNPAGSPFVRLMQVCVA 244 (577)
Q Consensus 168 ~r~~~~~~~~~~~~ig~~lg~~i~--~~l~~~~gw~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (577)
||+..++.+.+-|+|+.+.|++. +++..+.+||..|++++++.++. ++++...+.+ ++...- ++..++.
T Consensus 151 -RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~-Pqs~GL-P~ie~~~----- 222 (448)
T COG2271 151 -RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR-PQSEGL-PPIEEYR----- 222 (448)
T ss_pred -cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC-ccccCC-CCHHHhh-----
Confidence 99999999999999999999999 89988889999999999876554 4444443332 111100 1111100
Q ss_pred HHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHH
Q 008096 245 AFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIW 324 (577)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~ 324 (577)
+++.+.++.++ +.+....|+++. +-+...|.+ +.+.
T Consensus 223 ----------~d~~e~~~~~~------------------------------~~~~ls~~~i~~-~YVL~Nk~i---W~la 258 (448)
T COG2271 223 ----------GDPLEIYEEEK------------------------------ENEGLTAWQIFV-KYVLKNKLI---WLLA 258 (448)
T ss_pred ----------cCchhhhhhhc------------------------------cCCCccHHHHHH-HHHHcChHH---HHHH
Confidence 00100100000 000111121111 111111211 2222
Q ss_pred HHHHHHHHHhhccceeEEeecccccccccccccc-ccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHH
Q 008096 325 ASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQI-PAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMG 403 (577)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 403 (577)
+..+..|.+-.... ...+.+..+.. +++. .+....++...+.+.+..+.+++.|++.+ .+| .+. -+
T Consensus 259 ~a~vfvYivR~gi~---dW~p~YL~e~k--~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfk----grR--~p~--~~ 325 (448)
T COG2271 259 LANVFVYVVRYGIN---DWGPLYLSEVK--GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFK----GRR--GPM--AL 325 (448)
T ss_pred HHHHHHHHHHHHHh---hhHHHHHHHhc--CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc----ccc--chH--HH
Confidence 22333333322211 11111222222 3332 24445555666777777777775555442 222 121 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhh--hhhhcccCcccHHHH
Q 008096 404 IGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHL--EFLYDQAPESMRSTA 481 (577)
Q Consensus 404 ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~--~~v~~~~P~~~rg~~ 481 (577)
+.+++..++...+-..+ ..+++. ...++..+|.....|... ....|.+|++..|++
T Consensus 326 i~~~~i~~~~~~~w~~~--------------------~~~~~l--~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA 383 (448)
T COG2271 326 IFMLLITASLVLYWLAP--------------------NGSYLL--DAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTA 383 (448)
T ss_pred HHHHHHHHHHHHHHcCC--------------------CccHHH--HHHHHHHHHHHHhhHHHHHHHHHhccccHhhccch
Confidence 33333333333222211 113333 333444555555555533 368899999999999
Q ss_pred HHHHHHHHhH-HHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 008096 482 TALFWTANSI-GNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTF 553 (577)
Q Consensus 482 ~gi~~~~~~l-g~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 553 (577)
.|+...+..+ |+..+....+.+.|.. +|. ..|.++.+.++++.+.+..+.+..++
T Consensus 384 ~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~------gW~-----------g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 384 TGFVGLFAYLIGAALAGLPLGYIADTW------GWD-----------GGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred hchhhhHHHHhhHHhcCCcceeeEecC------CCc-----------chHHHHHHHHHHHHHHHHHHHhhcch
Confidence 9999998888 8888888877765532 443 34888888888888887777664433
No 50
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=3.7e-22 Score=206.04 Aligned_cols=347 Identities=17% Similarity=0.257 Sum_probs=255.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
.+....++..+..+...+.++.|.+ ++|.+..+.+++.+...++..+++++.|+++||+ |||+.+.++.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 4455677788888888888888774 6799999999999999999999999999999998 9999999999999999998
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
+.+.. +.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...
T Consensus 81 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 132 (352)
T cd06174 81 LAFAS----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGF 132 (352)
T ss_pred HHHhc----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHH
Confidence 88765 67889999999999999999999999999999887 999999999999
Q ss_pred HHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCccc
Q 008096 181 GAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVL 260 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (577)
++|..++|.+.+.+.+..+|++.+++.++..++..+...... +++.
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~--------------------- 178 (352)
T cd06174 133 GLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------RLLL--------------------- 178 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------HHHH---------------------
Confidence 999999999999999888999999888877666555443321 0000
Q ss_pred ccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhcccee
Q 008096 261 YQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTF 340 (577)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~ 340 (577)
....................+.+
T Consensus 179 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 201 (352)
T cd06174 179 ---------------------------------------------------------LLALAFFLLSFGYYGLLTYLPLY 201 (352)
T ss_pred ---------------------------------------------------------HHHHHHHHHHhHHHHHHHHHHHH
Confidence 00000001111111111111111
Q ss_pred EEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008096 341 SLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVE 420 (577)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~ 420 (577)
.+...+ ......+.......+...+..++.++ +.||.++|+. .+..+..+..++++......
T Consensus 202 -------~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 202 -------LQEVLG-LSAAEAGLLLSLFGLGGILGALLGGL----LSDRLGRRRL------LLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred -------HHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhhH------HHHHHHHHHHHHHHHHHHhc
Confidence 010000 00111334455555666666666554 5566654430 27778777777776665544
Q ss_pred HHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHH
Q 008096 421 MKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLV 500 (577)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~ 500 (577)
+.+...+..++.+++.+...+....++.|..|++.|++.+|+.+..+.+|..+++.+.
T Consensus 264 ----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 321 (352)
T cd06174 264 ----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA 321 (352)
T ss_pred ----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677888899999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 008096 501 TLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYF 545 (577)
Q Consensus 501 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 545 (577)
+.+.+.. ++...+.+.+++.+++.+..+
T Consensus 322 g~l~~~~-----------------~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 322 GLLLDTG-----------------GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHhccc-----------------CcchHHHHHHHHHHHHHHHhe
Confidence 9875422 224446777777777666554
No 51
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.91 E-value=8.7e-22 Score=208.68 Aligned_cols=180 Identities=9% Similarity=0.055 Sum_probs=131.2
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhH-hhhhchhhhhhhhhhccchhHHH-HHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADTYAGRFWTI-TVASII 93 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~-~~~~~~ 93 (577)
......++...++.+++...+.+.++.|+.+++|.|.++.|++.+.+.+ +..+.++++|+ +||+ ||||.+ ..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 4555666777899999989999999999999999999999999877655 55555555665 9998 998875 455555
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
..++..+++++. +++.+++.+.+.+...+...|...++..|+.++++ | ..+...
T Consensus 92 ~~~~~~~~~~~~----------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 145 (393)
T PRK15011 92 GVLACTLFAWNR----------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG--R--EAVMFS 145 (393)
T ss_pred HHHHHHHHHHhh----------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc--c--hHHHHH
Confidence 556666666655 55555555444444445667888888888665433 0 123455
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
++.+.+.++|.++||.+++++.+.+|||..|++.++..++..+.+....|
T Consensus 146 ~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 146 SFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 78888999999999999999998899999998888766555444444333
No 52
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=3.4e-22 Score=210.52 Aligned_cols=178 Identities=12% Similarity=0.099 Sum_probs=146.4
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+.+|+.........+......+.. .+..+++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+.+..+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHH
Confidence 445555555444555554444433 4445566678999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++.+++.++. +.+.+++.|++.|++.+...+...+++.|.+|+++ |+++
T Consensus 91 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~ 142 (398)
T TIGR00895 91 LFSVFTLLCALAT----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTA 142 (398)
T ss_pred HHHHHHHHHHHcc----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchh
Confidence 8888888887755 67778899999999999999999999999999877 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
.++.+.+..+|..+++.+++++.+..||++.|++.++..++..++...
T Consensus 143 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMR 190 (398)
T ss_pred HhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999998886554444443333
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=8.4e-22 Score=207.23 Aligned_cols=178 Identities=17% Similarity=0.154 Sum_probs=150.0
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
+++.++.+.+..+...+......+.+|. +.+++|.|.++.+++.+.+.++..+++++.|+++||+ |||+.+..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 3344455555555566666666666654 5678999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+.++++. +.+.+++.|++.|++.+...+...+++.|.+|+++ |++.++
T Consensus 81 ~~~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 132 (385)
T TIGR00710 81 ALSSLGLALSN----------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYS 132 (385)
T ss_pred HHHHHHHHHHc----------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHH
Confidence 99998888765 67789999999999999999999999999999877 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
+.+....+|..++|.+++++.+.++|++.|++.++..++..+......
T Consensus 133 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 133 ILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998889999999887776655544444433
No 54
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=1.1e-21 Score=210.83 Aligned_cols=179 Identities=11% Similarity=0.058 Sum_probs=131.7
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHH-----HHHhHhhhhchhhhhhhhhhccchhH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQL--HMPLTKAANTL-----TNFGGTGSLTPLIGAFVADTYAGRFW 85 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l--g~s~~~~~~i~-----~~~~~~~~~~~~~~G~laDr~~Grk~ 85 (577)
..+|+......+..+++.+....+-...+.++.+++ +.++.+ +++. ++..++..+++++.|+++||+ |||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~ 95 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHH
Confidence 344555555555666666666554445555666554 677663 5443 234455667888899999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh
Q 008096 86 TITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ 165 (577)
Q Consensus 86 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 165 (577)
++.++.+++.++.+++++++++.. ........+++.|+++|++.|+..|...+++.|++|+++
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~--- 158 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFST--------------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK--- 158 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHH--------------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC---
Confidence 999999999999999998762221 000112358889999999999999999999999999887
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhhc--------ccccchhhhHHHHHHHHH
Q 008096 166 ATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ--------DNVGWNWGLGIPTVAMFL 213 (577)
Q Consensus 166 ~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~--------~~~gw~~~f~~~~~~~~~ 213 (577)
|++..+..+.+..+|..++..+...+. +.+|||++|++.++..++
T Consensus 159 ---rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 159 ---KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 899999988888999888877766554 357999999887765443
No 55
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.91 E-value=7.7e-24 Score=216.63 Aligned_cols=182 Identities=14% Similarity=0.175 Sum_probs=162.0
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+..++.+..+.+.++++...-|.+-..+ +-.++.+|.+++..|++.+.+.+..++.+|+.|+++||| .||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 3445556666778888888888776644 567788999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
++.++.+.++++. .+|++.+.|.+.|+|.+.+.|.++++++|.||+.+ |++.
T Consensus 107 iW~~Av~~~~fs~----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~ 158 (493)
T KOG1330|consen 107 IWTLAVFASGFSN----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRV 158 (493)
T ss_pred HHHHHHHHHHHHH----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHH
Confidence 9999999999987 88999999999999999999999999999999988 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHHcccc
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
++++|++.++|.++|.+++..+....+ |||+|+..+++.++..++.++..++
T Consensus 159 ~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 159 LGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred HHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 999999999999999999998887766 9999999999887766666555543
No 56
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=2.5e-21 Score=206.51 Aligned_cols=162 Identities=10% Similarity=0.149 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008096 32 AVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLR 111 (577)
Q Consensus 32 ~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 111 (577)
......+.+|. +.+++|.|.++.++..+.+.++..+++++.|+++||+ |||+++..+.++..++.++++++.
T Consensus 31 ~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------ 102 (413)
T PRK15403 31 TTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------ 102 (413)
T ss_pred HHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------
Confidence 33444444444 6778999999999999999999999999999999998 999999999999999999998866
Q ss_pred CCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 112 PPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
+.+.++++|+++|++.+...+...+++.|.+|+++ |++.+++++.+.++|..+||.++
T Consensus 103 ----------------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 103 ----------------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred ----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999998777777888999999877 88999999999999999999999
Q ss_pred HhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 192 VYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 192 ~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
+.+.+.+|||+.|++.++..+++.+...+..|
T Consensus 161 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 161 AALMHFVHWKVLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99988889999999888776666554443333
No 57
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=3.9e-21 Score=204.31 Aligned_cols=174 Identities=13% Similarity=0.153 Sum_probs=145.2
Q ss_pred ccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHH
Q 008096 11 RKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVA 90 (577)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (577)
+|.+-||++....+..++..++.+....+++.++ +++|.|.++.+++.+.+.++..++.++.|+++||+ |||+++..+
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~ 84 (402)
T TIGR00897 7 QKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIG 84 (402)
T ss_pred HHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHH
Confidence 4556777788888888888888888888899988 57899999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
.++..++.+++.+.. .. ..+++.+++.|++.|+|.+...+...+.+.+.+|+++ |+
T Consensus 85 ~~~~~~~~~~~~~~~-~~-----------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g 140 (402)
T TIGR00897 85 LLLWCVGHAAFIVFG-LG-----------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LS 140 (402)
T ss_pred HHHHHHHHHHHHHHh-cc-----------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HH
Confidence 999888876654321 00 1256778889999999998888888888999999877 99
Q ss_pred hhhhHHHHHHHHHH-HHHHHHHHhhcccccchhhhHHHHHH
Q 008096 171 KYFNWYYFVMGAAV-LVAVTVLVYIQDNVGWNWGLGIPTVA 210 (577)
Q Consensus 171 ~~~~~~~~~~~ig~-~lg~~i~~~l~~~~gw~~~f~~~~~~ 210 (577)
++.++++.+.++|. .++|.+++++.+.+||+..++.....
T Consensus 141 ~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 141 SAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999999999996 68999999988888977666555443
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=1.7e-21 Score=206.37 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=149.4
Q ss_pred cCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHH
Q 008096 12 KKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVAS 91 (577)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (577)
+++.+|..+.+.....+..+......+.+|.+ .+++|.|..+.+++.+.+.++..+++++.|+++||+ |||+.+.++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~ 80 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGM 80 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHH
Confidence 34466777777777777777766666666655 478999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhh
Q 008096 92 IIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 171 (577)
Q Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 171 (577)
++..++.+.+.++. +.+.+++.|++.|++.+...+....+..|.+++++ |++
T Consensus 81 ~~~~~~~~~~~~~~----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 132 (394)
T PRK11652 81 SIFILGTLVALFAH----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRH 132 (394)
T ss_pred HHHHHHHHHHHHHc----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHH
Confidence 99999988888765 67789999999999999888888888899888766 888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHH
Q 008096 172 YFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 172 ~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 217 (577)
+.++++.+..+|..++|.+++++.+..||++.|++.++..++..+.
T Consensus 133 ~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 133 ANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999988889999998877655544333
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=2.2e-21 Score=204.69 Aligned_cols=156 Identities=14% Similarity=0.125 Sum_probs=138.7
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ 95 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (577)
.|.++++++..++..++...+.+++|.|++ ++|.|.+++|++.+.+.++..+++++.|+++||+ |||+.+..+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 355778888888888888888899998886 6899999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
++...++++. +++.+++.|+++|++.+...|...+.+.+..++++ |+++++.
T Consensus 83 ~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 134 (381)
T PRK03633 83 AGCAGLGLMV----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAA 134 (381)
T ss_pred HHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHH
Confidence 9988888765 67889999999999999998888888888888766 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccch
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWN 201 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~ 201 (577)
++.+.++|..+||.+++.+.+...|.
T Consensus 135 ~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 135 YMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHhcccccccch
Confidence 99999999999999999987654333
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=8.9e-22 Score=210.44 Aligned_cols=392 Identities=8% Similarity=-0.024 Sum_probs=226.7
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
+..+......++..++++.+.++++.|+++++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++.++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 5666666778888888888999999999999999999999999999999999999999999998 999998887666554
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhH-HHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLA-ILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
+..........+ ... ....+..+.++..+...+.....+.++.++. .++++..++.
T Consensus 89 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~ 145 (420)
T PRK09528 89 LFGPFFIYVFAP-------------------LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV----SRRSGFEYGR 145 (420)
T ss_pred HHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH----Hhhccccchh
Confidence 433221110000 000 0112222233333333333333333332211 1126677888
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCC
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVS 255 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (577)
.+...++|..++|.+++++.+ .+|++.|++.++..++..+..+...++.++++... +++ .++
T Consensus 146 ~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~ 207 (420)
T PRK09528 146 ARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA---------------NAL--GAN 207 (420)
T ss_pred hHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhc---------------cch--hcc
Confidence 888899999999999998875 58999998888776665555444333211100000 000 000
Q ss_pred CCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHH-Hh
Q 008096 256 DPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLIT-AY 334 (577)
Q Consensus 256 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~-~~ 334 (577)
.+ +..++. .....+.+.+.............+. ..
T Consensus 208 ~~------------------------------------------~~~~~~--~~~~l~~~~~~~l~l~~~~~~~~~~~~~ 243 (420)
T PRK09528 208 AS------------------------------------------AVSLKD--ALALLKLPKFWFLVLYVIGVACFYDVFD 243 (420)
T ss_pred cc------------------------------------------cccHHH--HHHHccCCCeEeehHHHHHHHHHHHHHH
Confidence 00 000000 0000011111111111111111111 11
Q ss_pred hccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHH
Q 008096 335 AQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATL 414 (577)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~ 414 (577)
.+.+.+.. ....+...+ ....+.+.....+...+..++.+ ++.||+++|+. +.++.++..++.+
T Consensus 244 ~~~~~~~~--~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g----~l~dr~g~~~~-------~~~~~~l~~~~~~ 307 (420)
T PRK09528 244 QQFPNFFA--SFFATPEQG---TRVFGYLNSFQVFLEALIMFFAP----FIINRIGAKNA-------LLLAGTIMAVRII 307 (420)
T ss_pred HHHHHHHH--HHHhccCcc---hHHHHHHHHHHHHHHHHHHHHHH----HHHHHhCcchh-------hHHHHHHHHHHHH
Confidence 11122111 000010110 00112333334444445555544 46677765543 6666777777666
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHH-HHHHHhHHH
Q 008096 415 VAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATAL-FWTANSIGN 493 (577)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi-~~~~~~lg~ 493 (577)
+..+.+ +++.++...++.+++.....+....++.+..|++.+++..+. +++...+|.
T Consensus 308 l~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 308 GSGFAT----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA 365 (420)
T ss_pred HHHhcc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence 665543 455556667778888877778888899999999999998766 678889999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008096 494 YVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAK 549 (577)
Q Consensus 494 ~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 549 (577)
.+++.+.|.+.|.. + +...|...+++.++..++.+...+
T Consensus 366 ~ig~~~~G~l~~~~------G-----------~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 366 VFLSTLAGNLYDSI------G-----------FQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHHHHhh------C-----------chHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999987754 2 244477777777666666555444
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=4.3e-21 Score=203.40 Aligned_cols=165 Identities=15% Similarity=0.100 Sum_probs=136.0
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
..+.+....++..++...+...++.. .+++|.+..+.+++.+.+.+.+.++.++.|+++||+ |||+++.++.++..++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 34555666777666555555555544 578999999999999999999999999999999999 9999999999999888
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
.+.++++. + .++.|+++|++.+...|+..+++.|++|+++ |+++.++.+
T Consensus 82 ~~~~~~~~----------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~ 130 (393)
T PRK11195 82 CLLMLFGI----------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWME 130 (393)
T ss_pred HHHHHHHH----------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 88777644 3 2678999999999999999999999999887 999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHH
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~ 216 (577)
...++|.++||.++|++.+. .|+..+.+.+...+++.+
T Consensus 131 ~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 131 GSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 477776666554444433
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.90 E-value=7.5e-22 Score=212.23 Aligned_cols=159 Identities=11% Similarity=0.058 Sum_probs=130.7
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCC
Q 008096 39 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGD 118 (577)
Q Consensus 39 ~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 118 (577)
...+++++ +|+|.++.+++.+.+.++..+++++.|+++||+ |||+.+..+.++..++.+++++..+..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT---------- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc----------
Confidence 33456665 599999999999999999999999999999998 999999999998888888776543111
Q ss_pred CcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc-cc
Q 008096 119 QVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ-DN 197 (577)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~-~~ 197 (577)
.+...+++.|++.|++.+...+....++.|++|+++ |++++++++.+.++|..+++.+.+... ..
T Consensus 116 --------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 116 --------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred --------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 256677889999999999999999999999999888 999999999999999999988876544 34
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 198 VGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 198 ~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
.+||+.|++.++..++..+...+..+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 68999999988776665444444333
No 63
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=2.5e-21 Score=212.19 Aligned_cols=420 Identities=13% Similarity=0.102 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHHhc-----CCCh--HHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 008096 35 GFHANMISYLTTQL-----HMPL--TKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAIL 107 (577)
Q Consensus 35 ~~~~~l~~~l~~~l-----g~s~--~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 107 (577)
+....+..++++.. ..+. ++.+++.+...+++.+++++.|+++|++ |||++++++.+++.+|.++++++.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 44455555555532 2222 4559999999999999999999999998 999999999999999999999987
Q ss_pred CCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 008096 108 PQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVA 187 (577)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg 187 (577)
++..++++|++.|+|.|+.....+.+++|..|++. |+...+.++....+|..++
T Consensus 141 --------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 141 --------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLG 194 (513)
T ss_pred --------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999888 9999999999999999999
Q ss_pred HHHHHhhccc-ccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccch
Q 008096 188 VTVLVYIQDN-VGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEEL 266 (577)
Q Consensus 188 ~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 266 (577)
.+++....+. ++||..+++..+..++..+.+++. | |+|+++.+.++.
T Consensus 195 ~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~-p-------------------------------esp~~L~~~g~~ 242 (513)
T KOG0254|consen 195 YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFL-P-------------------------------ESPRWLIEKGRL 242 (513)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhC-C-------------------------------CChHHHHHcCCh
Confidence 6555444332 489988888777766655553332 2 222222222222
Q ss_pred hhhhhcCCcccc---cccchhhhhhh--hccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeE
Q 008096 267 DASICLDGKLLH---TKHMKFLDKAA--IVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFS 341 (577)
Q Consensus 267 ~~~~~~~~~~~~---~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (577)
.+++....++.. .+....++... ...+.........|..+.. ...+|+.+ +......+.. +.......
T Consensus 243 ~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~----i~~~l~~fqq-~tG~~~~~ 315 (513)
T KOG0254|consen 243 EEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS--PKVRKRLI----IGLLLQLFQQ-LTGINYVF 315 (513)
T ss_pred HHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC--cchHHHHH----HHHHHHHHHH-HhCCceEE
Confidence 222222111111 00000000000 0000000000111111111 01112121 1111111112 22222222
Q ss_pred EeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008096 342 LQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEM 421 (577)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~ 421 (577)
.+....++.. +.+.+.........+..++...+... +.||.+||+. ++.|...+.+++++++....
T Consensus 316 ~Y~~~if~~~---g~~~~~~~~~~~~~~v~~~~t~~~~~----lvd~~gRr~l-------ll~s~~~m~~~~~~~~~~~~ 381 (513)
T KOG0254|consen 316 YYSTTIFKSA---GLKSDTFLASIILGVVNFLGTLVATY----LVDRFGRRKL-------LLFGAAGMSICLVILAVVGV 381 (513)
T ss_pred eehHHHHHhc---CCCCchHHHHHHHHHHHHHHHHHHHH----HHHHhccHHH-------HHHhHHHHHHHHHHHHHHHH
Confidence 2222222211 11111112222222222223233233 4555555443 78888888888887776541
Q ss_pred HHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHH
Q 008096 422 KRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVT 501 (577)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~ 501 (577)
. ...+. +......+..+....++.........+..|.+..|..|.+.|+++.++...++++.+++......
T Consensus 382 ~----~~~~~-----~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 382 F----ALYYP-----NSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred H----hccCC-----CcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1 11100 00112334444455555666677788889999999999999999999999999999988877766
Q ss_pred HHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHH-HHhhhhhccccccccccccC
Q 008096 502 LVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVI-YYFFCAKIYTFKPIQMHQKG 562 (577)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~ 562 (577)
...+..+ ....|..+++...+... +.+++.||+|+++.||.++.
T Consensus 453 ~~~~~~~-----------------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~ 497 (513)
T KOG0254|consen 453 FITEALG-----------------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINEL 497 (513)
T ss_pred HHHHhcc-----------------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHH
Confidence 6543321 12235666666666666 78888999999999987643
No 64
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-21 Score=206.71 Aligned_cols=397 Identities=12% Similarity=0.089 Sum_probs=243.0
Q ss_pred HHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHH
Q 008096 55 AANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYA 134 (577)
Q Consensus 55 ~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (577)
.+.+++.+.+++++++...|+++||+ |||..+.++.++..++.+++.++...+ +...+++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~-------------------~~e~li~ 121 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP-------------------SFEMLIL 121 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHH
Confidence 45677888999999999999999999 999999999999999988888876222 6888999
Q ss_pred HHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH--hhcccccchhhhHHHHHHHH
Q 008096 135 SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV--YIQDNVGWNWGLGIPTVAMF 212 (577)
Q Consensus 135 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~--~l~~~~gw~~~f~~~~~~~~ 212 (577)
+|++.|+..|......+-++.|..|++- ||..-.....+..+|..+|..++. .+.+.-.|.+.+.+..+.++
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPAL 195 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999998 999999999999999999976653 34455569999888888777
Q ss_pred HHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCccccc-ccchhhhhhcCCcccccc-cchhhhhh-h
Q 008096 213 LSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQ-NEELDASICLDGKLLHTK-HMKFLDKA-A 289 (577)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~-~ 289 (577)
+.++.+.++ ||||++++. .++.++++...+..+-.+ ..+..+.. .
T Consensus 196 ~~l~~l~~~--------------------------------PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~ 243 (485)
T KOG0569|consen 196 LQLALLPFL--------------------------------PESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLR 243 (485)
T ss_pred HHHHHHhcC--------------------------------CCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHH
Confidence 766665543 344444444 333333433333332111 11111100 0
Q ss_pred -hccccccCCCCC-cccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeeccccccccccccccccchhhhh-
Q 008096 290 -IVTEEDDIKSPN-LWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVF- 366 (577)
Q Consensus 290 -~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 366 (577)
..++..+.++.. .++.++.+ ..|+... ....+.+.+.+........ ....+-.+. ++....+...+.
T Consensus 244 e~~~~~~~~~~~~sl~~~~~~~--~lR~~~~-----i~~~v~~~qq~sGi~ai~~-Yst~i~~~a--G~~~~~a~~an~~ 313 (485)
T KOG0569|consen 244 EIEEEELEKKKQISLRQLLKNP--TLRRPLL-----IGIVVSFAQQFSGINAIFF-YSTSIFKTA--GFTPEEAQYANLG 313 (485)
T ss_pred HHHHhccccccCCcHHHHhcCc--chhHHHH-----HHHHHHHHHHhcCcceeHH-HHHHHHHHc--CCCHHHHHHHHHH
Confidence 000000111111 11111111 1112111 1111122222221111100 010111111 222222222222
Q ss_pred hHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhH
Q 008096 367 TMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLW 446 (577)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (577)
.....++...+. ..+.||.+||+. ++++..++.+..+++....... .+-+ ....+..
T Consensus 314 ~g~v~~~~t~~~----~~lid~~gRRpL-------ll~~~~~~~~~~~~~~~~~~l~----~~~~--------~~~~y~~ 370 (485)
T KOG0569|consen 314 IGIVNLLSTLVS----PFLIDRLGRRPL-------LLISLSLMAVALLLMSIALFLS----NSFG--------SWLSYLC 370 (485)
T ss_pred HHHHHHHHHHHH----HHHHHhcCCcHH-------HHHHHHHHHHHHHHHHHHHHHH----HHhh--------hHHHHHH
Confidence 122222222222 235566665543 7777777777666555443110 0000 0011112
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchh
Q 008096 447 LVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKL 526 (577)
Q Consensus 447 l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~ 526 (577)
+...+++.........|..+-+..|.+|++.|+.++++...++++.+++.....+.+.+..+
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g------------------ 432 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG------------------ 432 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 22233333334556688899999999999999999999999999999999999999877652
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccccccccccc
Q 008096 527 EYFYWLITLLQVVNVIYYFFCAKIYTFKPIQMHQ 560 (577)
Q Consensus 527 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 560 (577)
.++|..+.+..+++.++.+...||+|+|+.++..
T Consensus 433 ~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 433 PYVFILFVIPLAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 2558889999999999999999999999877654
No 65
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=1.1e-20 Score=200.71 Aligned_cols=148 Identities=15% Similarity=0.193 Sum_probs=130.6
Q ss_pred HHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccc
Q 008096 44 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKE 123 (577)
Q Consensus 44 l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (577)
+++++|.|.++.+++.+++.++..+++++.|+++||+ |||+.+..+.++..++.+.++++.
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------ 92 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE------------------ 92 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 6689999999999999999999999999999999998 999999999999988888888765
Q ss_pred cccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhh
Q 008096 124 ADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWG 203 (577)
Q Consensus 124 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~ 203 (577)
+.+.+++.|+++|++.+...+...+++.|.+|+++ +++.++.......+|..++|.+++++.+.+||++.
T Consensus 93 ----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~ 162 (401)
T PRK11043 93 ----SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAI 162 (401)
T ss_pred ----CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Confidence 67788999999999998888888899999999776 77888888888899999999999999988999999
Q ss_pred hHHHHHHHHHHHHHHHH
Q 008096 204 LGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 204 f~~~~~~~~~~~~~~~~ 220 (577)
|++..+..++..+....
T Consensus 163 ~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 163 FATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 98887766655544443
No 66
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.89 E-value=1.4e-21 Score=204.25 Aligned_cols=154 Identities=15% Similarity=0.186 Sum_probs=135.3
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
....+++++++|+|.++.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++++++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 3344578889999999999999999999999999999999998 999999999999999999998876
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHH-HHHHhhcc
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAV-TVLVYIQD 196 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~-~i~~~l~~ 196 (577)
+.+.+++.|++.|++.+...+...+++.|++|+++ |+++.++.+.+.++|..++| ++++.+.+
T Consensus 82 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 82 ----------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred ----------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 67889999999999999999999999999999877 99999999999999999999 56777777
Q ss_pred cccchhhhHHHHHHHHHHHHHHHH
Q 008096 197 NVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 197 ~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
..+|++.|++.++..++..+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 146 LYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhe
Confidence 789999998877765554444333
No 67
>PRK15075 citrate-proton symporter; Provisional
Probab=99.89 E-value=9.6e-21 Score=203.40 Aligned_cols=172 Identities=13% Similarity=0.091 Sum_probs=125.6
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH-HHHhHh-----hhhchhhhhhhhhhccchhHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTL-TNFGGT-----GSLTPLIGAFVADTYAGRFWTITV 89 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~-~~~~~~-----~~~~~~~~G~laDr~~Grk~~~~~ 89 (577)
|+.........+++.+... ......+.+.++++.+..+.+... +...++ ..+++++.|+++||+ |||+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFF-LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHH
Confidence 3444444445555544443 455556678889998887765443 322222 236788999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 169 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (577)
+.+++.++.++++++.++... .......+++.|+++|++.+...++..++++|++|+++ |
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r 151 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATI--------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------K 151 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHH--------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------c
Confidence 999999999999987622110 00001246889999999999999999999999999988 9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhc--------ccccchhhhHHHHH
Q 008096 170 WKYFNWYYFVMGAAVLVAVTVLVYIQ--------DNVGWNWGLGIPTV 209 (577)
Q Consensus 170 ~~~~~~~~~~~~ig~~lg~~i~~~l~--------~~~gw~~~f~~~~~ 209 (577)
+++.+++..+.++|..+|+.+++.+. +.+|||++|++..+
T Consensus 152 g~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 152 GFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999988888888888887776652 46899999987544
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.89 E-value=2e-20 Score=198.09 Aligned_cols=170 Identities=14% Similarity=0.113 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
..+...+....+.....+.+|.+ .+++|.|.++.+++.+.+.++..+++++.|+++||+ |||+.+..+.++..++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHH
Confidence 34445556666666666666655 567999999999999999999999999999999998 9999999999999999888
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
+.++. +.+.+++.|+++|++.+...+...+++.|.+|+++ |+++.++.+...
T Consensus 85 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~ 136 (392)
T PRK10473 85 CSLAE----------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGIT 136 (392)
T ss_pred HHHhC----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHH
Confidence 88755 56778899999999999999999999999999877 999999999999
Q ss_pred HHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 181 GAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
++|..++|.+++.+.+..||++.|++.++..++..++...
T Consensus 137 ~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 137 CIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888889999998887766555444433
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=1.5e-20 Score=198.39 Aligned_cols=343 Identities=12% Similarity=-0.030 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHH----HHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTI----TVASIIYQI 96 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~----~~~~~~~~i 96 (577)
.+....++...++-...+++|.|++ ++|+|..+.+++.+.+.+...+.+++.|.++||+ ||++.. ..+..+..+
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~ 85 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAA 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHH
Confidence 3444566666666777888999995 6899999999999999999999999999999998 875433 222222221
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
..+..++ +.+.+++.|++++.+.+...|...++..+. .++ |++.++..
T Consensus 86 --~~~~~~~----------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~ 133 (382)
T TIGR00902 86 --AFSAGAH----------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKV 133 (382)
T ss_pred --HHHHhhh----------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHH
Confidence 1222333 678888999999999988889988887553 233 78889999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCC
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSD 256 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (577)
....++|.+++|.+++++.+.+|||..|++......+.++ .....++.++++ ++++ + +
T Consensus 134 ~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~--~-----------------~- 191 (382)
T TIGR00902 134 RLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIPPKD-AIPE--D-----------------E- 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCCCCc-cccc--c-----------------c-
Confidence 9999999999999999999999999998876554332222 222222110000 0000 0 0
Q ss_pred CcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhh-hHHHHHHHHHHHhh
Q 008096 257 PNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMG-PIWASGILLITAYA 335 (577)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~l~~~~~~~~~~~~ 335 (577)
+ ..++ ......+.|+..... ..++........+.
T Consensus 192 ~-------------------------------------------~~~~--~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~ 226 (382)
T TIGR00902 192 S-------------------------------------------QGDS--AFIALLKNPMNLRFLAAVCLIQGAHAAYYG 226 (382)
T ss_pred c-------------------------------------------ccch--hHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000011112221111 11111222222221
Q ss_pred ccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHH
Q 008096 336 QQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLV 415 (577)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~ 415 (577)
..+.+ .+. .+ ......+.......+..++..++ .+++.||++. .+.+.+|.++..+...+
T Consensus 227 ~~~~~-------l~~-~g-~s~~~~g~l~~~~~~~~i~~~~~----~~~l~~r~g~-------~~~l~~~~~~~~~~~~~ 286 (382)
T TIGR00902 227 FSAIY-------WQA-AG-ISASATGLLWGIGVLAEIIIFAF----SNKLFQNCSA-------RDLLLISAIACVGRWAI 286 (382)
T ss_pred HHHHH-------HHH-CC-CCHhHHHHHHHHHHHHHHHHHHH----hHHHHhhCCH-------HHHHHHHHHHHHHHHHH
Confidence 11111 111 11 00011222233333333444333 4456666543 33377888888888777
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH-HHHhHHHH
Q 008096 416 AGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW-TANSIGNY 494 (577)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~-~~~~lg~~ 494 (577)
....+ +++.++...+++++..+...+....++.+. |++.|++++|+++ +..++|..
T Consensus 287 ~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~ 343 (382)
T TIGR00902 287 IGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIA 343 (382)
T ss_pred HHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHH
Confidence 76654 666677778999999999999999999988 9999999999987 56889999
Q ss_pred HHHHHHHHHhhhc
Q 008096 495 VSTLLVTLVHKFS 507 (577)
Q Consensus 495 l~~~i~~~v~~~~ 507 (577)
+++.+.|.+.+..
T Consensus 344 ~g~~~~G~l~~~~ 356 (382)
T TIGR00902 344 IFTAFAGFIYPTL 356 (382)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987754
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=5.9e-21 Score=200.65 Aligned_cols=159 Identities=16% Similarity=0.186 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008096 32 AVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLR 111 (577)
Q Consensus 32 ~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 111 (577)
+.....+.+|.+.+ ++|+|..+.+++.+.+.++..+++++.|+++||+ |||+.+..+.++..++...+.++.
T Consensus 6 ~~~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~------ 77 (377)
T PRK11102 6 AIDMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ------ 77 (377)
T ss_pred HHHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc------
Confidence 34455577777764 6899999999999999999999999999999998 999999999999999999888765
Q ss_pred CCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 112 PPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
+.+.+++.|+++|++.+...+...+++.|.+|+++ |++++++.+....+|..++|.++
T Consensus 78 ----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~ 135 (377)
T PRK11102 78 ----------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIG 135 (377)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999999877 99999999999999999999999
Q ss_pred HhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 192 VYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 192 ~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
+++.+..||++.|++.++..++..+....
T Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 136 GWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 99998889999998877766555444433
No 71
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.88 E-value=4e-20 Score=198.39 Aligned_cols=355 Identities=14% Similarity=0.129 Sum_probs=221.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc---cchh-HHHHHHHHHHHHHHHHH
Q 008096 26 EVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY---AGRF-WTITVASIIYQIGMFSL 101 (577)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~---~Grk-~~~~~~~~~~~i~~~~~ 101 (577)
.+..++....+.++++.|+++++|+|..++|++.++..+..++..|+.|+++||. +||| +.+..+.+..+++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 4556666777778899999999999999999999999999999999999999983 2774 46777888888887777
Q ss_pred HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCC-CCchhhhhhhhhhhHHHHHH
Q 008096 102 TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~ 180 (577)
....+.+. ......+++.+++.+++.+...+...++..|+.++ ++ |++..++.+.+.
T Consensus 88 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~~~~~ 145 (437)
T TIGR00792 88 FTTPDFSA----------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFRRFGA 145 (437)
T ss_pred HhCCCCCc----------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHHHHHH
Confidence 65431111 12355667778888999998888889999998754 34 888888888888
Q ss_pred HHHHHHHHHHHHhhc-------ccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccC
Q 008096 181 GAAVLVAVTVLVYIQ-------DNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDM 253 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~-------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (577)
++|..+++.+.+.+. +..||++.+.+.+++.++..+......++.+.+++..+
T Consensus 146 ~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~-------------------- 205 (437)
T TIGR00792 146 TLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNI-------------------- 205 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc--------------------
Confidence 888877776655443 24589998887777665554444333332110000000
Q ss_pred CCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhH-HHHHHHHHH
Q 008096 254 VSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPI-WASGILLIT 332 (577)
Q Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l-~~~~~~~~~ 332 (577)
.+ + .+..+ .+ +...+.|.+...... ++.......
T Consensus 206 --~~-----------------~------~~~~~---------------~~-----~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (437)
T TIGR00792 206 --EK-----------------K------LSLKQ---------------IF-----KALFKNDQLLILCLAYLFYNLAFNI 240 (437)
T ss_pred --cc-----------------C------CCHHH---------------HH-----HHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00000 00 001111222111111 111111111
Q ss_pred HhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHH
Q 008096 333 AYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLA 412 (577)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~ 412 (577)
......++.... . +.....+.+..+..+..+++.++.++ +.+|+++|+. +.++.++.+++
T Consensus 241 -~~~~~~~~~~~~------~--~~~~~~~~~~~~~~i~~ii~~~~~~~----l~~r~g~~~~-------~~~~~~~~~~~ 300 (437)
T TIGR00792 241 -KNGVQVYYFTYV------L--GDPELFSYMGSIAIVAGLIGVLLFPR----LVKKFGRKIL-------FAGGILLMVLG 300 (437)
T ss_pred -HcchhheeEeee------c--CChHHHHHHHHHHHHHHHHHHHHHHH----HHHHhCcHHH-------HHHHHHHHHHH
Confidence 111112222111 1 10011223344445555666666544 6666654432 66677766666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccC-------cccHHHHHHHH
Q 008096 413 TLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAP-------ESMRSTATALF 485 (577)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P-------~~~rg~~~gi~ 485 (577)
++...+.. .+.+..++..++.+++.+...+..++++.|..| ++.+|++.|+.
T Consensus 301 ~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 301 YLIFFFAG---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred HHHHHHcc---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 65544322 133344555677888888888888888888765 56789999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhhcC
Q 008096 486 WTANSIGNYVSTLLVTLVHKFSA 508 (577)
Q Consensus 486 ~~~~~lg~~l~~~i~~~v~~~~~ 508 (577)
++...+|..+++.+.+.+.+..+
T Consensus 360 ~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 360 TFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999887653
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=4.4e-20 Score=197.19 Aligned_cols=393 Identities=12% Similarity=0.064 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
-+-...++...++-...++++.|+++++|+|..|.|++.+++.++..+++++.|+++||+.+||+++.++.++..++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 34456666767767777999999999999999999999999999999999999999999823477888888877777777
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCC--CchhhhhhhhhhhHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDET--DPKQATKTWKYFNWYYF 178 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~ 178 (577)
+.+.. +.+.+++.|++.+++.+...+...++..+...+. +..+..+|.+.+|
T Consensus 86 ~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G---- 139 (418)
T TIGR00889 86 AAQVT----------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG---- 139 (418)
T ss_pred HHHhc----------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh----
Confidence 77654 5677888888989987777776666543222110 0011112444444
Q ss_pred HHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCC-ChhhHHHHHHHHHHhhccccCCCCC
Q 008096 179 VMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAG-SPFVRLMQVCVAAFRKRNLDMVSDP 257 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (577)
.+|.++||.+++.+.....|. +|++.++..++..++.. ..|+.++.++++ ++.++ +
T Consensus 140 --~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~----------~--------- 196 (418)
T TIGR00889 140 --TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAKMSIKV----------M--------- 196 (418)
T ss_pred --hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCccccccCHHH----------H---------
Confidence 478899999988884433354 45555555444443322 223211100000 00000 0
Q ss_pred cccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhH-HHHHHHHHHHhhc
Q 008096 258 NVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPI-WASGILLITAYAQ 336 (577)
Q Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l-~~~~~~~~~~~~~ 336 (577)
.++. .+...+.+........ ++...........
T Consensus 197 -------------------------------------------~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 230 (418)
T TIGR00889 197 -------------------------------------------LGLD---AFILFKNKRMAIFFFFSMLLGAPLQITNIF 230 (418)
T ss_pred -------------------------------------------hhhh---HHHHhcCCCeeeHHHHHHHHHhHHHHHHHh
Confidence 0000 0000011111111111 1111111111110
Q ss_pred cceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHH
Q 008096 337 QGTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLV 415 (577)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~ 415 (577)
.+.+ .... ..+.....++. ...+...+...+..++..... .++.||+++|+. +.++.++..+++.+
T Consensus 231 ~~~~-~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~----g~l~dr~g~r~~-------l~~~~~~~~v~~~l 297 (418)
T TIGR00889 231 GNGF-LHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTI----PFFLKRFGIKKV-------MLLSLVAWALRFGF 297 (418)
T ss_pred HHHH-HHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHH----HHHHHHhCcHHH-------HHHHHHHHHHHHHH
Confidence 0111 0000 00000000000 012333444444445555554 446677655443 67777777666555
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH-HHHhHHHH
Q 008096 416 AGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW-TANSIGNY 494 (577)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~-~~~~lg~~ 494 (577)
..... ....+++.+++..++.+++++...+....++.+.+|++.|++++|+.+ ....+|..
T Consensus 298 ~~~~~------------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 298 FAYGD------------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSL 359 (418)
T ss_pred HHHcC------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHH
Confidence 54322 001123344556778889988888888999999999999999999997 67889999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 008096 495 VSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKI 550 (577)
Q Consensus 495 l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 550 (577)
++|.+.|.+.+..+..+ ..++...|...+++.+++.+.++++.++
T Consensus 360 iGp~l~G~l~~~~g~~~-----------~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYG-----------TFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHHHHHhcccc-----------CCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999887652211 1124566778878877777777777664
No 73
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.88 E-value=1e-20 Score=192.44 Aligned_cols=391 Identities=12% Similarity=0.048 Sum_probs=267.6
Q ss_pred cCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHH
Q 008096 12 KKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVAS 91 (577)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (577)
|+.++|+++. -...+..++..+.+.+.+..++.+++|+|+.|.+++...-.+.+.+..++-|.+.||| |-|++..++.
T Consensus 9 k~~~~~~L~~-S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWL-STLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSM 86 (417)
T ss_pred ccchhHHHHH-HHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHH
Confidence 3445555444 4466667788888999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhh
Q 008096 92 IIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 171 (577)
Q Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 171 (577)
++..+-.+..+++...| +++.+++.++++|++ |+.+++..++++++||+++ +|.
T Consensus 87 ~l~~IP~~~~~~a~~~~-------------------~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~ 140 (417)
T COG2223 87 LLLLIPCLGLAFAVTYP-------------------STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGL 140 (417)
T ss_pred HHHHHHHHHHHHHccCC-------------------chHHHHHHHHHHhcc-cceehcccccccccCChhh------hhH
Confidence 99999999999987333 357899999999999 5567899999999999988 999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccccc---chhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhh
Q 008096 172 YFNWYYFVMGAAVLVAVTVLVYIQDNVG---WNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRK 248 (577)
Q Consensus 172 ~~~~~~~~~~ig~~lg~~i~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (577)
+.|++. ..|+|..+...++.++....| |+....+..+.+++..+..++..+..+..++..++...
T Consensus 141 AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~----------- 208 (417)
T COG2223 141 ALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP----------- 208 (417)
T ss_pred HHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-----------
Confidence 999999 889999999999999988888 99999888888888777766655433222111110000
Q ss_pred ccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhh-hhhhhhhhhhHHHHH
Q 008096 249 RNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVE-ELKSVIRMGPIWASG 327 (577)
Q Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~~~l~~~~ 327 (577)
. . .+... +++.....+....++
T Consensus 209 ---------------~-------------------~-----------------------~~~v~~~~~~W~lsllY~~tF 231 (417)
T COG2223 209 ---------------A-------------------Q-----------------------LKAVFSNKDTWLLSLLYFATF 231 (417)
T ss_pred ---------------h-------------------H-----------------------HHHHhcCcchHHHHHHHHHHH
Confidence 0 0 00011 112222222222222
Q ss_pred HHHHHHhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHH
Q 008096 328 ILLITAYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFV 407 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~ 407 (577)
-.+...-.+.+.+ ...+++ -....++.+....++...+.-|+.++ +.||++.++. +.+.+.
T Consensus 232 G~Fvgfs~~l~~~-------~~~~fg-~~~~~Ag~~a~~f~~~g~l~Rp~GG~----LsDR~Gg~rv-------~~~~f~ 292 (417)
T COG2223 232 GGFVGFSAYLPMY-------LVTQFG-LSPVTAGLIAFLFPLIGALARPLGGW----LSDRIGGRRV-------TLAVFV 292 (417)
T ss_pred HHHHHHHHHHHHH-------HHHhcC-CChhhHHHHHHHHHHHHHHHHhccch----hhhhccchhH-------HHHHHH
Confidence 2222222222222 222221 11233556667777777778888766 6666665543 666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHH
Q 008096 408 ISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWT 487 (577)
Q Consensus 408 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~ 487 (577)
.++++..++....+ ....+.+.+..+..++..++..+.-+...+-++..+.|+ +-|...|+...
T Consensus 293 ~~~~~~~~l~~~~~---------------~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga 356 (417)
T COG2223 293 GMALAAALLSLFLT---------------GFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGA 356 (417)
T ss_pred HHHHHHHHHHcccc---------------ccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHH
Confidence 66666665554330 000112333444444555555555566666677777765 67899999999
Q ss_pred HHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 008096 488 ANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKI 550 (577)
Q Consensus 488 ~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 550 (577)
.+++|++.-|...+...+.++ .+...|+.+....+++.+..+....+
T Consensus 357 ~G~lGGf~lp~~~g~~~~~tg----------------~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 357 IGGLGGFFLPLAFGVSLDLTG----------------SYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred hccccccchhHHHHHHHHhcc----------------cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998766552 23445777777777777777766543
No 74
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=4.5e-20 Score=196.04 Aligned_cols=179 Identities=12% Similarity=-0.003 Sum_probs=135.3
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ 95 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (577)
|++++ -...+...+..+.+.+.+...+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~-s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWI-SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 43333 445566666666666766667655 8999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
+.++.++++.. ....+++.+++.|++.|++ +...+.....++++||+++ |++++++
T Consensus 112 i~~~~~~~a~~-----------------~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi 167 (462)
T PRK15034 112 IPCVWLGIAVQ-----------------NPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGI 167 (462)
T ss_pred HHHHHHHHHHc-----------------ccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHH
Confidence 99998887620 0012788899999999998 7788999999999999888 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc-----c-------------cccchhhhHHHHHHHHHHHHHHHHc
Q 008096 176 YYFVMGAAVLVAVTVLVYIQ-----D-------------NVGWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~-----~-------------~~gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
+....++|..+++.+...+. . ..+|+.++++..+..++..+..++.
T Consensus 168 ~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 168 NGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 86666666665555543322 2 2346666666666655555444443
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.88 E-value=5.7e-20 Score=194.90 Aligned_cols=387 Identities=9% Similarity=-0.013 Sum_probs=230.9
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.++......++...+.....++++.|+++++|+|..+.+++.+.+.++..+++++.|+++||+ |||+.+..+....+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 345556678888888888999999999999999999999999999999999999999999998 9999998877666554
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
..........+. .........++.+++.|++.+...|...++..|..++ ++..++..+
T Consensus 82 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~ 139 (396)
T TIGR00882 82 FAPFFIYVFGPL--------------LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYGKAR 139 (396)
T ss_pred HHHHHHHHhhhH--------------HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccchhh
Confidence 433221110000 0001233456678888999888888888777664321 334567777
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCC
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDP 257 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (577)
...++|..+||.+++.+.+ ++|+.+|++.+.+.++..++.+...++.++ +++.++ +.+. +++
T Consensus 140 ~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------------~~~~-~~~ 201 (396)
T TIGR00882 140 MFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPS----SATVAN------------ALGA-NAS 201 (396)
T ss_pred hhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCch----hhhhhc------------cccc-ccC
Confidence 7889999999999998864 699999998887766655444433322111 000000 0000 000
Q ss_pred cccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHH-HHHHHHHhhc
Q 008096 258 NVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWAS-GILLITAYAQ 336 (577)
Q Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~-~~~~~~~~~~ 336 (577)
+ .+..++ .+..+.|........... ...+.....+
T Consensus 202 ----------------------~-----------------~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (396)
T TIGR00882 202 ----------------------A-----------------FSLKLA-----LELFRQRKFWMFVLYVVGVACVYDVFDQQ 237 (396)
T ss_pred ----------------------C-----------------CCHHHH-----HHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000 000011112111111111 1111111111
Q ss_pred cceeEEeeccccc-cccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHH
Q 008096 337 QGTFSLQQAKSMD-RHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLV 415 (577)
Q Consensus 337 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~ 415 (577)
.+.+.. .... ...+ . ...+...+...+...+.... ..++.||+++|+. +.++.++.++++.+
T Consensus 238 ~~~y~~---~~~~~~~~~--~-~~~g~~~~~~~i~~~~~~~~----~g~l~~r~g~~~~-------l~~~~~l~~l~~~~ 300 (396)
T TIGR00882 238 FANFFT---SFFATPQQG--T-RVFGYVTTMGELLNALIMFC----APLIINRIGAKNA-------LLIAGTIMSVRIIG 300 (396)
T ss_pred HHHHHH---Hhccccccc--h-HHHHHHHHHHHHHHHHHHHH----HHHHHHHhccchh-------HHHHHHHHHHHHHH
Confidence 111100 0000 0000 0 00122233333333334444 3457777765543 66777766666655
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHH-HHHHHhHHHH
Q 008096 416 AGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATAL-FWTANSIGNY 494 (577)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi-~~~~~~lg~~ 494 (577)
....+ +.+++.+..++.+++..........+..+..|++.++++.+. .+....+|+.
T Consensus 301 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~ 358 (396)
T TIGR00882 301 SSFAT----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI 358 (396)
T ss_pred HHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH
Confidence 44332 455556667788888777777777788888999999988877 6788999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 008096 495 VSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYF 545 (577)
Q Consensus 495 l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 545 (577)
+++.+.|.+.|.. ++...|.+.+++.++..++..
T Consensus 359 ~~~~l~G~l~~~~-----------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 359 FLSTLAGNMYDSI-----------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHhHHHHHHhc-----------------ccHHHHHHHHHHHHHHHHHHH
Confidence 9999999987643 124456666666666555443
No 76
>PRK10133 L-fucose transporter; Provisional
Probab=99.87 E-value=5.5e-20 Score=197.55 Aligned_cols=155 Identities=12% Similarity=0.038 Sum_probs=122.5
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+++...+..+..+.+...+........+| .+++++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~ 99 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLF 99 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 33445445555555555555544445555 45899999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
++.++.+++.... . ..++..++++|+++|+|.|...+...+++.|..|+++ |...
T Consensus 100 ~~~~~~~l~~~~~-~------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~ 154 (438)
T PRK10133 100 LYALGAALFWPAA-E------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFR 154 (438)
T ss_pred HHHHHHHHHHHHH-h------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHH
Confidence 9999988764221 0 1267889999999999999999999999998766544 5556
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l 194 (577)
.+++.....+|..+|+.+++.+
T Consensus 155 ~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 155 LNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888889999998887654
No 77
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=1.4e-19 Score=196.63 Aligned_cols=360 Identities=14% Similarity=0.058 Sum_probs=242.4
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
|.+..+....++.+++.+....-++-++. ++.-|+...+++..+..+-..+..+++|.++||+ .|||.++.+-++..+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 45566667777777777766666665554 5677999999999999999999999999999999 999999999988877
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
....+++..... ..+.+.+++.-++.|++.+...|+.++++.|.+|+++ ...+.++.
T Consensus 88 ~~~~L~~l~~~~-----------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~ 144 (524)
T PF05977_consen 88 VALLLAVLAFFG-----------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALN 144 (524)
T ss_pred HHHHHHHHHHhC-----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHH
Confidence 666655543121 2367888899999999999999999999999999888 88999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCC
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSD 256 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (577)
+...|+..++||.++|.+...+|-.++|.+.++..++++.++...+++.++.+...+ ++.+.++..++.
T Consensus 145 s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e---~~~~~l~~G~ry-------- 213 (524)
T PF05977_consen 145 SISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLPRE---RFFSALREGLRY-------- 213 (524)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchh---hhhhhHHHHHHH--------
Confidence 999999999999999999888898889998888776665555444332211111111 111111111000
Q ss_pred CcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhh-hhhhhHHHHHHHHHHHhh
Q 008096 257 PNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSV-IRMGPIWASGILLITAYA 335 (577)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~~~~~l~~~~~~~~~~~~ 335 (577)
.+.+ ...+.+ .+...+.+.. .....
T Consensus 214 -------------------------------------------------v~~~--~~l~~~l~~~~~~~l~~---~a~~a 239 (524)
T PF05977_consen 214 -------------------------------------------------VRSS--PPLRSVLLRSFLFNLFA---SAVWA 239 (524)
T ss_pred -------------------------------------------------Hhcc--hHHHHHHHHHHHHHHhh---hHHHH
Confidence 0000 001111 1111111111 01110
Q ss_pred ccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHH
Q 008096 336 QQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLV 415 (577)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~ 415 (577)
..+......++ +-....+.+.+...++.++++.+..+ +.+|... .+.+..+.++.+++++.
T Consensus 240 -------LlPl~a~~~l~-~~a~~yGll~a~~gvGai~Gal~~~~----l~~~~~~-------~~lv~~~~~~~a~~~~~ 300 (524)
T PF05977_consen 240 -------LLPLFARDVLG-GGASGYGLLLAAFGVGAILGALLLPR----LRRRLSS-------RRLVLLASLLFALALLL 300 (524)
T ss_pred -------hhhHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHH----hhcccCc-------chhhHHHHHHHHHHHHH
Confidence 11111222221 11112334444455555555555333 4444322 22256677777777776
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHH
Q 008096 416 AGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYV 495 (577)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l 495 (577)
+++.. +.+...+..++.|.+........++.+.+..|++.||...+++++....+..+
T Consensus 301 lal~~----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l 358 (524)
T PF05977_consen 301 LALSP----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL 358 (524)
T ss_pred Hhcch----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH
Confidence 66654 55666677788899989999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc
Q 008096 496 STLLVTLVHKFS 507 (577)
Q Consensus 496 ~~~i~~~v~~~~ 507 (577)
|.++.|.+.+..
T Consensus 359 Gsll~G~la~~~ 370 (524)
T PF05977_consen 359 GSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 78
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.86 E-value=8.5e-22 Score=207.17 Aligned_cols=366 Identities=35% Similarity=0.600 Sum_probs=233.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCc
Q 008096 84 FWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDP 163 (577)
Q Consensus 84 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 163 (577)
.|++.++.+++.+|+++++++. .|... .++.+...++++..+.++|.|+..|+..++++|++++++.
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~-~~~~~------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~ 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSA-IPPSL------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-TSSSC------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHH-hcchh------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch
Confidence 4789999999999999988877 34311 1233567899999999999999999999999999998752
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccccccc-CCCCChhhH-HHHH
Q 008096 164 KQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNL-NPAGSPFVR-LMQV 241 (577)
Q Consensus 164 ~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 241 (577)
++ |.++++++|++.|+|..+++.+.+++.+++||.+.|.++.+.++++++.+...+++++.. ++.+++..+ ....
T Consensus 68 ~~---~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~ 144 (372)
T PF00854_consen 68 SR---RDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLV 144 (372)
T ss_dssp TH---HHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHH
T ss_pred hh---hhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHH
Confidence 33 788899999999999999999999999999999999999999999999999998888777 566666665 3334
Q ss_pred HHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccc-cchhhhhhhhhhhhh
Q 008096 242 CVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRL-NTVHRVEELKSVIRM 320 (577)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k~~~~~ 320 (577)
+....+++....+....++.......+ ........ .... ..... ......|.. ++.++.+..|.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~k~~~~~ 213 (372)
T PF00854_consen 145 LVAAFKKRKLAVPKGSSWLDWALFQYS----ERSIFGII--VFIR-AAVIF----FPEIFFWALFCQVQRVEELKALIRF 213 (372)
T ss_dssp HHHHHHHHCCCH-HHHHHHHHHHHHHC----CCCCCCCC--CHHH-HHHHH----CCCHHHHTTTSSTTTHHHCCHHHCH
T ss_pred HHHHHHHhhcccccchHHHHHhhhhhh----hhhhhhhh--hhcc-chhhh----hhhhhhcccCCccceeeeeeeeeec
Confidence 444444444333222212221111000 00000000 0000 00000 000011111 123345566677777
Q ss_pred hhHHHHHHHHHHHhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchh
Q 008096 321 GPIWASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLH 400 (577)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 400 (577)
++.+.+.+.+.+...+...+...+...++....+.+++++..+.+++.+.+++..|+++++++|+.++ ++. .++..
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~--~~~--~~~~~ 289 (372)
T PF00854_consen 214 LPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR--GIQ--PSPPQ 289 (372)
T ss_dssp HHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HH
T ss_pred cccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh--ccc--chhhh
Confidence 77777777777777777776667777777667633889999999999999999999999999999882 222 37888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHH
Q 008096 401 RMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRST 480 (577)
Q Consensus 401 ~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~ 480 (577)
++.+|+++..++.+....++.+|......++ ..+.++.+..+++..++|.+..+...+...|.+|++..+.
T Consensus 290 k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~ 360 (372)
T PF00854_consen 290 KFGIGMVFAILAMFVAAIVEIRRLCYAQPCG---------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSS 360 (372)
T ss_dssp HHHHH-HHHHHHHHTTTHHHH---HH----T---------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSS
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhcccccC---------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHH
Confidence 9999999999998888877765554444443 2344677799999999999999999997777777766666
Q ss_pred HHHHHHHHH
Q 008096 481 ATALFWTAN 489 (577)
Q Consensus 481 ~~gi~~~~~ 489 (577)
.+|++....
T Consensus 361 m~~~~~~~~ 369 (372)
T PF00854_consen 361 MMGIWFALS 369 (372)
T ss_dssp STHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666665443
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=2e-19 Score=215.86 Aligned_cols=360 Identities=12% Similarity=0.044 Sum_probs=220.3
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~--~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
.+.+..++...++.++...+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 3455666667777777666666677777777777654 4478999999999999999999999999 999999998877
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
..++.+++.++.. ..+++.+++.|+++|++.+...|+..++++|++|+++ |++++
T Consensus 87 ~~~~~~~~~~~~~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 141 (1146)
T PRK08633 87 EVGLTLLIVLAYY-------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRAN 141 (1146)
T ss_pred HHHHHHHHHHHHH-------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhh
Confidence 6666655554321 1157889999999999999999999999999999888 99999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccc--------c-cchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHH
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDN--------V-GWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVA 244 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~--------~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (577)
+++..+.++|.++|+.+++++.+. + +|.+.+.+..+...+..+++.+..++.+..++..+...+
T Consensus 142 ~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 214 (1146)
T PRK08633 142 GLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK------- 214 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc-------
Confidence 999999999999999999998765 2 343333333322222222222222221110000000000
Q ss_pred HHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhh-hH
Q 008096 245 AFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMG-PI 323 (577)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~l 323 (577)
. . ...... ..+ +.....+.+.... ..
T Consensus 215 -----------~-----~-----------------~~~~~~---------------~~~-----~~l~~~~~~~~~~~~~ 241 (1146)
T PRK08633 215 -----------Y-----L-----------------FPKLLW---------------RNL-----KLLRSDRVLWLAIIGL 241 (1146)
T ss_pred -----------c-----c-----------------cHHHHH---------------HHH-----HHHhcCcHHHHHHHHH
Confidence 0 0 000000 000 0000111111111 11
Q ss_pred HHHHHHHHHHhhccceeEEeecccccccccccccc--ccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhH
Q 008096 324 WASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQI--PAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHR 401 (577)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 401 (577)
.+.....+......+. +....+ +.+. ..+.+.....++.+++..+ .+++.+|.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~-------~~~~~~--g~s~~~~~g~~~~~~~ig~~~g~~~----~g~l~~r~~~~~~------- 301 (1146)
T PRK08633 242 SYFWFISQLAQANFPA-------YAKEVL--GLDNTFQVQYLLAASAIGIGIGSLL----AGRLSGRHIELGL------- 301 (1146)
T ss_pred HHHHHHHHHHHHhhHH-------HHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHH----HHHHhCCceEccc-------
Confidence 1111111111111111 111111 1111 1233334444444455555 4446666654433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHH
Q 008096 402 MGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTA 481 (577)
Q Consensus 402 ~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~ 481 (577)
+.++.++.+++++++.... +.+.+++..++.+++.++..+..+.++.+.+|++.||++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~ 359 (1146)
T PRK08633 302 VPLGALGLALSLFLLPTAP----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKV 359 (1146)
T ss_pred hhHHHHHHHHHHHHHHHhh----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhh
Confidence 5666666666665555433 455556667788888888888899999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHH
Q 008096 482 TALFWTANSIGNYVSTLLVTLV 503 (577)
Q Consensus 482 ~gi~~~~~~lg~~l~~~i~~~v 503 (577)
+|+.++...+|..+++.+.+.+
T Consensus 360 ~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 360 LAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887776654
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=5.3e-20 Score=220.57 Aligned_cols=347 Identities=13% Similarity=-0.008 Sum_probs=200.5
Q ss_pred HHHHhcCCCh-HHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH--HHHHHHHHHHHhhhcCCCCCCCCCCCC
Q 008096 43 YLTTQLHMPL-TKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI--IYQIGMFSLTLSAILPQLRPPPCQGDQ 119 (577)
Q Consensus 43 ~l~~~lg~s~-~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~ 119 (577)
.+..+.+.+. ...++..+++.+...++++++|+++||| |||+++..... +........++..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------- 105 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------- 105 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 3444444333 4578888899999999999999999999 99997643222 1111212222211
Q ss_pred cccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccccc
Q 008096 120 VCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVG 199 (577)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~g 199 (577)
.+++.+++.|+++|++.++..|+..+++.|++|+++ |++++++.+++.++|.++||.++|++....|
T Consensus 106 -------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~ 172 (1140)
T PRK06814 106 -------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGN 172 (1140)
T ss_pred -------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 168889999999999999999999999999999988 9999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHccccccccCCCCC----hhhHHHHHHHHHHhhccccCCCCCcccccccchhhhhhcCCc
Q 008096 200 WNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGS----PFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGK 275 (577)
Q Consensus 200 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 275 (577)
|++.|+...+..++++++.....+. +..++..+ ..++...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------------------------- 216 (1140)
T PRK06814 173 FVILVALLMGIAVLGWLASLFIPKT-GNAAPDLKIDRNIIRSTIT----------------------------------- 216 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCCCeeccchHHHHHH-----------------------------------
Confidence 9998855544444444443333221 11100000 0000000
Q ss_pred ccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhh-hhHHHHHHHHHHHhhccceeEEeecccccccccc
Q 008096 276 LLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRM-GPIWASGILLITAYAQQGTFSLQQAKSMDRHLTK 354 (577)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (577)
.+ +...+.+.+... +...+....+.....+.+.+ ....++
T Consensus 217 --------------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~g- 257 (1140)
T PRK06814 217 --------------------------LL-----KYAKADKRIWLAILGISWFWLVGAVVLSQLPLL-------AKETLG- 257 (1140)
T ss_pred --------------------------HH-----HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHcC-
Confidence 00 000011111111 11111111111111111111 121121
Q ss_pred ccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 008096 355 SFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVD 434 (577)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 434 (577)
......+.+.+...++.+++..+.++ +.+|..+++. +..+.++.++..+.+.+... ........+..
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~~g~----l~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~ 324 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFLASK----LSEGRITLLY-------VPIGALLMGLFGLDLAFASS--SVPAEPAQLKS 324 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHH----HhCCceeeee-------ehHHHHHHHHHHHHHHhccc--ccccccccccc
Confidence 00112344455555666666666554 4444332221 33444444333332222100 00000000000
Q ss_pred CCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 008096 435 KPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHK 505 (577)
Q Consensus 435 ~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~ 505 (577)
--......+.+.+.+..++.|++.++..+..++++.+.+|++.||+++|+.++.+.++..+++.+.+.+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000002334556667778999999999999999999999999999999999999999999999888753
No 81
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.86 E-value=1.9e-20 Score=195.83 Aligned_cols=159 Identities=15% Similarity=0.167 Sum_probs=132.7
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+......++.....+...+++|.++++++|+|..+.+++.+.+.++..+++++.|+++||+ |||+.+.++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 34455566666677777788888789999999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
++++++. .+++.+++.|+++|++.+. .+...++++|++|+++ |+++.+++..
T Consensus 82 ~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~~~~~~~~ 133 (366)
T TIGR00886 82 LWAGLAV---------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGTALGLAAG 133 (366)
T ss_pred HHHHHHh---------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhHHHHHHHH
Confidence 8888754 1467788999999999665 4667889999999887 9999999888
Q ss_pred HHHHHHHHHHHHHHhhcc----------cccchhhhHH
Q 008096 179 VMGAAVLVAVTVLVYIQD----------NVGWNWGLGI 206 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~----------~~gw~~~f~~ 206 (577)
..++|..+++.+++.+.. ..+||+.|++
T Consensus 134 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 134 WGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 888888888777765543 3489999943
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.86 E-value=2.6e-19 Score=188.97 Aligned_cols=341 Identities=13% Similarity=0.044 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchh----HHHHHHHHHHHHH
Q 008096 22 IFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRF----WTITVASIIYQIG 97 (577)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk----~~~~~~~~~~~i~ 97 (577)
.....++..++...+.+++|.|++ ++|.|..+.|++.+.+.+...+++++.|+++||+ ||+ +.+.++..+..
T Consensus 9 ~~~~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~-- 84 (382)
T PRK11128 9 LALSYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA-- 84 (382)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH--
Confidence 344466666777888889999995 5899999999999999999999999999999998 984 33322222111
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
...+..+ .+.+.+++.|++.|++.+...|...++..++. ++ |+++++..+
T Consensus 85 ~~~~~~~----------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~--~~------~~~a~~~~~ 134 (382)
T PRK11128 85 VAFWFGA----------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ--KQ------IGLDYGKVR 134 (382)
T ss_pred HHHHHhc----------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHH--hh------ccCCcchHH
Confidence 1111111 26788889999999999999999888877762 23 667788888
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCC
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDP 257 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (577)
...++|..+||.+++++.+++|||..|++.++..++..+... ..++. +|++++.++ .+
T Consensus 135 ~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~----------------~~-- 192 (382)
T PRK11128 135 LWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPTI---MPQGESRQQ----------------ES-- 192 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCCC---CCccccccc----------------cc--
Confidence 888999999999999999999999999877765444433322 22211 111000000 00
Q ss_pred cccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhh-HHHHHHHHHHHhhc
Q 008096 258 NVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGP-IWASGILLITAYAQ 336 (577)
Q Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-l~~~~~~~~~~~~~ 336 (577)
+....+ ++..+.|....... .++...........
T Consensus 193 ----------------------------------------~~~~~~-----~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 193 ----------------------------------------AGWPAW-----KALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred ----------------------------------------cccchH-----HHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 000000 11111122221111 11111111111111
Q ss_pred cceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHH
Q 008096 337 QGTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLV 415 (577)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~ 415 (577)
.+.+ .++ . +.+ ...+.+.....+..++...+ .+++.||+++|+ .+..+.++.+++.++
T Consensus 228 ~~~~-------~~~-~--g~s~~~~g~~~~~~~~~~~~~~~~----~g~l~~r~~~~~-------~l~~~~~~~~~~~~~ 286 (382)
T PRK11128 228 SAIY-------WQA-A--GYSASTIGYLWSLGVVAEVLIFAF----SNRLFRRWSARD-------LLLLSAICGVVRWGL 286 (382)
T ss_pred HHHH-------HHH-C--CCCHhHHHHHHHHHHHHHHHHHHH----HHHHHHHCCHHH-------HHHHHHHHHHHHHHH
Confidence 1111 111 1 111 11222333333333333333 445666654332 366777777776665
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH-HHHhHHHH
Q 008096 416 AGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW-TANSIGNY 494 (577)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~-~~~~lg~~ 494 (577)
....+ +.+.+++..++++++.+...+....+..+. |++.+++++++.+ ....+|..
T Consensus 287 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ 343 (382)
T PRK11128 287 MGSTT----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIA 343 (382)
T ss_pred HHhhh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHH
Confidence 55443 555666678889999998888888888887 5555789999887 55778889
Q ss_pred HHHHHHHHHhhhc
Q 008096 495 VSTLLVTLVHKFS 507 (577)
Q Consensus 495 l~~~i~~~v~~~~ 507 (577)
+++.+.|.+.+..
T Consensus 344 ig~~i~G~l~~~~ 356 (382)
T PRK11128 344 IMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987654
No 83
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=2.4e-18 Score=187.55 Aligned_cols=178 Identities=14% Similarity=0.137 Sum_probs=141.9
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc----cchhHH-HHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY----AGRFWT-ITV 89 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~----~Grk~~-~~~ 89 (577)
+||..+.++...+......+.....+|.+++ +.|.|.++.+.+... ... .+..++.|.++||+ .||||. +.+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~-~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLV-GQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHH-HHH-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 4455666777888888888888888999986 459999999997333 333 26889999999996 177775 667
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 169 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (577)
+.+...++...+++.. +..+++.+.+.+++.+++.+...+...++..|++|+++ |
T Consensus 87 ~~i~~~~~~~~~a~~~-------------------~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------r 141 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE-------------------PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------R 141 (491)
T ss_pred HHHHHHHHHHHHHHcC-------------------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------h
Confidence 7777777777777653 11257778889999999999999999999999999887 9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhcc-cccchhhhHHHHHHHHHHHHHHHH
Q 008096 170 WKYFNWYYFVMGAAVLVAVTVLVYIQD-NVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 170 ~~~~~~~~~~~~ig~~lg~~i~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
+++.++...+..+|.++++.+++++.+ ..|||..|++.++..++..+....
T Consensus 142 g~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 142 GAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999988 579999999988776665554443
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.84 E-value=2.7e-19 Score=187.99 Aligned_cols=157 Identities=13% Similarity=0.101 Sum_probs=117.6
Q ss_pred HHHHHHHHhcC--CChHHHHHHHHHH-----hHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008096 39 NMISYLTTQLH--MPLTKAANTLTNF-----GGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLR 111 (577)
Q Consensus 39 ~l~~~l~~~lg--~s~~~~~~i~~~~-----~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 111 (577)
++..++.+++. .++++.+.+.+.. .+...+++++.|+++||+ |||+++.++.++..++.++++++.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~-- 90 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT-- 90 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh--
Confidence 34445544433 4456666555432 233346789999999998 9999999999999999999988763221
Q ss_pred CCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 112 PPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
........+++.|+++|++.+...+...+++.|.+|+++ |++..++.+.+..+|..+++.+.
T Consensus 91 ------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 91 ------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred ------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 000112357889999999999999999999999999888 99999999999999999999887
Q ss_pred Hhhc--------ccccchhhhHHHHHHHHHHHH
Q 008096 192 VYIQ--------DNVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 192 ~~l~--------~~~gw~~~f~~~~~~~~~~~~ 216 (577)
+.+. +.++||+.|++.++..++..+
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 6553 357899999887766554443
No 85
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.84 E-value=6.3e-24 Score=228.97 Aligned_cols=398 Identities=14% Similarity=0.137 Sum_probs=238.6
Q ss_pred HHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHH
Q 008096 53 TKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAIL 132 (577)
Q Consensus 53 ~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (577)
.+.+++.+...++..+++++.|+++||+ |||++++++.++..++.++.++++.. .+.+.+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-------------------~~~~~~ 105 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-------------------NNFWML 105 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-------------------cccccc
Confidence 4678999999999999999999999999 99999999999999999999987511 256779
Q ss_pred HHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcc---cccchhhhHHHHH
Q 008096 133 YASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQD---NVGWNWGLGIPTV 209 (577)
Q Consensus 133 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~---~~gw~~~f~~~~~ 209 (577)
.++|++.|++.|+..+....++.|..|++. |++..++.+.+..+|..++..+.-.+.. +.+||..+++..+
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAI 179 (451)
T ss_pred cccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999888 9999999999999998888776544432 2459999888877
Q ss_pred HHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhh
Q 008096 210 AMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAA 289 (577)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 289 (577)
..++.++... ..||||+|++.+++.++++...++.+..+..+. +...
T Consensus 180 ~~l~~~~~~~--------------------------------~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~-~~~~ 226 (451)
T PF00083_consen 180 PSLLVLLLRF--------------------------------FLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDE-EIEE 226 (451)
T ss_pred cccccccccc--------------------------------ccccccceecccccccccccccccccccccccc-cccc
Confidence 6554333322 245666666666655555555444322111000 0000
Q ss_pred hccccccC-CCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeeccccccccccccccccc-hhhhhh
Q 008096 290 IVTEEDDI-KSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQIPAG-SMSVFT 367 (577)
Q Consensus 290 ~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 367 (577)
..++..+. +....|+....++. .+++.+..+.+..... .........+.....+ ..+ .... ......
T Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~-----~~g~~~~~~~~~~i~~-~~~----~~~~~~~~~~~ 295 (451)
T PF00083_consen 227 IKAEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQ-----FSGINFIFYYSPSIFE-NAG----ISNSFLATLIL 295 (451)
T ss_pred cccccccccccceeeeecccccc-cccccccccccccccc-----cccccccccccccccc-ccc----ccccccccccc
Confidence 00000000 01122332222111 2223322222211110 0000000011111111 110 1111 111111
Q ss_pred HHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCCccccchhhH
Q 008096 368 MVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAG-FVEMKRKQAALAHGLVDKPHIIIPISVLW 446 (577)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (577)
.+..++...+ ...+.||++||+. +..+..+.+++++..+ .... ..++ ....+...
T Consensus 296 ~~~~~~~~~~----~~~~~~~~GRr~~-------~i~~~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~ 351 (451)
T PF00083_consen 296 GLVNFLGTLL----AIFLIDRFGRRKL-------LIIGLLLMAICSLILGIIFFL------GVSS-------SSWWSILS 351 (451)
T ss_pred cccccccccc----ccccccccccccc-------ccccccccccccccccccccc------cccc-------cccccccc
Confidence 1111112222 2236677776654 6667666666655553 1110 0000 00112222
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchh
Q 008096 447 LVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKL 526 (577)
Q Consensus 447 l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~ 526 (577)
+....++.........+..+.+..|.+|++.|+++.|+....+++++++++.+.+.+.+..+ .
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-----------------~ 414 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-----------------G 414 (451)
T ss_pred ceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------------c
Confidence 22222223334446677888899999999999999999999999999999888766533221 1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhcccccccccccc
Q 008096 527 EYFYWLITLLQVVNVIYYFFCAKIYTFKPIQMHQK 561 (577)
Q Consensus 527 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 561 (577)
...+..++++.++..++.+++.||+|+++.+|.++
T Consensus 415 ~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 415 WGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred cccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 23367777888888888899999999999998764
No 86
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.84 E-value=2.2e-18 Score=183.54 Aligned_cols=165 Identities=12% Similarity=0.055 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLS 104 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~ 104 (577)
..+...+. +.+...+.+.+++++|+|..+.+++.+.+.++..+++++.|++.||+ |||+++.++.++++++.+++..+
T Consensus 11 ~f~~~G~~-~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~ 88 (410)
T TIGR00885 11 LFALWGFA-NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPA 88 (410)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH
Confidence 33333333 45555555677899999999999999999999999999999999998 99999999999999998876544
Q ss_pred hhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHH
Q 008096 105 AILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAV 184 (577)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 184 (577)
. ...+++.+++.|++.|+|.|...+...+++.+..|+++ |++..++.+...++|.
T Consensus 89 ~-------------------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~ 143 (410)
T TIGR00885 89 A-------------------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPFGS 143 (410)
T ss_pred H-------------------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHHHH
Confidence 3 01267889999999999999999999999999988776 7788889889999999
Q ss_pred HHHHHHHHhhcc--------------------------cccchhhhHHHHHHHHHHHH
Q 008096 185 LVAVTVLVYIQD--------------------------NVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 185 ~lg~~i~~~l~~--------------------------~~gw~~~f~~~~~~~~~~~~ 216 (577)
.+||.+++.+.. ..+||++|.+.++..++..+
T Consensus 144 ~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 144 IIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred HHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999876632 13699999877765554433
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.83 E-value=3.2e-19 Score=186.23 Aligned_cols=147 Identities=12% Similarity=0.145 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 008096 35 GFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPP 114 (577)
Q Consensus 35 ~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 114 (577)
.....+.+.+.+++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++.+.+ .+.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~--------- 85 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP--------- 85 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc---------
Confidence 3333344556779999999999999999999999999999999998 99999999998887777666 333
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 115 CQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
+.+.+++.|++.|++.+...+...+++.|.+| ++ |+++.++++.+.++|..+++.+++.+
T Consensus 86 -------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 86 -------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778899999999999988888888888886 45 88999999999999999999998888
Q ss_pred cccc--cchhhhHHHHHHHH
Q 008096 195 QDNV--GWNWGLGIPTVAMF 212 (577)
Q Consensus 195 ~~~~--gw~~~f~~~~~~~~ 212 (577)
.+.. +||+.|.+.++..+
T Consensus 146 ~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 146 AQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHhhhhhHHHHHHHHHHHHH
Confidence 7654 39988876655443
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=1.4e-18 Score=181.33 Aligned_cols=154 Identities=13% Similarity=0.131 Sum_probs=120.6
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc----cchhHH-HHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 008096 39 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY----AGRFWT-ITVASIIYQIGMFSLTLSAILPQLRPP 113 (577)
Q Consensus 39 ~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~----~Grk~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~ 113 (577)
.+|.+ .+++|+|.+|.++.... .+...+ .++.|.++||+ +||||. +..+.++..+....+++..+
T Consensus 10 ~~~~~-~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~------- 79 (356)
T TIGR00901 10 TLPYW-LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP------- 79 (356)
T ss_pred HHHHH-HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-------
Confidence 34444 45789999999999755 444444 88999999997 388887 45667667777666665531
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 008096 114 PCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVY 193 (577)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~ 193 (577)
..+.+.+....++.+++.+...+...+++.|++|+++ |+++.++...+.++|.++++.+++.
T Consensus 80 ------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 80 ------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1245666677778888889899999999999999877 9999999999999999999999999
Q ss_pred hccccc--------chhhhHHHHHHHHHHHHHHHH
Q 008096 194 IQDNVG--------WNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 194 l~~~~g--------w~~~f~~~~~~~~~~~~~~~~ 220 (577)
+....| ||..|++.++..++..+...+
T Consensus 142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 888777 999999888876665554443
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.82 E-value=2.8e-17 Score=174.70 Aligned_cols=168 Identities=13% Similarity=0.106 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhcc----chhH-HHHHHHHHHHH
Q 008096 22 IFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYA----GRFW-TITVASIIYQI 96 (577)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~----Grk~-~~~~~~~~~~i 96 (577)
++...+.....+.-...-+|.|+++ .|+|.+|.|++...... .+..++.|+++||+. |||| .+.++.++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 3456666677777778889999985 59999999999777776 688999999999972 5654 78888888888
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+...+++.. ...+.+.+++..++.++..+...+...+++.|++|+++ |+++.++.
T Consensus 81 ~~~~l~~~~-------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~ 135 (402)
T PRK11902 81 SIAAMAFCP-------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVK 135 (402)
T ss_pred HHHHHHhcC-------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHH
Confidence 888777653 11246667777777888889899999999999999888 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhccc-ccchhhhHHHHHHHHHHHHH
Q 008096 177 YFVMGAAVLVAVTVLVYIQDN-VGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~ 217 (577)
.++..+|.++++.+++++.+. .|||..|++.++..++..+.
T Consensus 136 ~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 136 VLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888875 59999999888766554443
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.80 E-value=6.4e-17 Score=173.13 Aligned_cols=442 Identities=10% Similarity=0.029 Sum_probs=249.1
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhh----ccchhHHHHHH-HHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADT----YAGRFWTITVA-SII 93 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr----~~Grk~~~~~~-~~~ 93 (577)
++.+-...+..++.+-...++++.|+ +++|.+..+.+++..+..+...+.+++.|+++|| + ||||.++++ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 34444455666777777777888877 5799999999999999999999999999999994 8 999988775 566
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
..++..+++++.++.....+.- -........+..+++..+..++....++...++++|++|+++++ ++.+.
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~-----~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~ 154 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNL-----DKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIAN 154 (477)
T ss_pred HHHHHHHHHhCchhhhhccccc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHH
Confidence 6677777777653221110000 00000111234455555667788888888999999999987511 35789
Q ss_pred hHHHHHHHHHHHHHHHHHHhh--cccc-------------cchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHH
Q 008096 174 NWYYFVMGAAVLVAVTVLVYI--QDNV-------------GWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRL 238 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l--~~~~-------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (577)
++.+...++|+++|+.++++. .+.+ +.+..|++.++..++..++..+..+|.+..++++. .++
T Consensus 155 ~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~-~~~- 232 (477)
T TIGR01301 155 AYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF-INS- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc-hhh-
Confidence 999999999999999988864 2111 56788988888777766665555444322111100 000
Q ss_pred HHHHHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhh-hhh
Q 008096 239 MQVCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEEL-KSV 317 (577)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~~ 317 (577)
+ ..+ .++ + +. ...++... +...+. |.+
T Consensus 233 -----------~--~~~-------~~~------------~-~~------------------~~~~~~i~-~~~~~mP~~m 260 (477)
T TIGR01301 233 -----------E--AAP-------PSK------------H-GE------------------EAFFGELF-GAFKYLPRPV 260 (477)
T ss_pred -----------h--ccc-------ccc------------c-ch------------------hhhHHHHH-HHHHHCCHHH
Confidence 0 000 000 0 00 00000000 000000 111
Q ss_pred hhhhhHHHHHHHHHHHhhccceeEEeecccc-ccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCC
Q 008096 318 IRMGPIWASGILLITAYAQQGTFSLQQAKSM-DRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGI 396 (577)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 396 (577)
.+.+...++...-|..+....+.+..+..+- +..-...++. ..-..+...+...+...+.+.++.++.+|+++|++
T Consensus 261 ~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~-gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~-- 337 (477)
T TIGR01301 261 WILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDD-GVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR-- 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh--
Confidence 1122222222222222222222211111000 0000001111 10112222222222222444445557777664322
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC--ccccch-hhHHHHHHHHHHHHHHHHhhhhhhhhhccc
Q 008096 397 TFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPH--IIIPIS-VLWLVPQYSLHGIAEAFMSVGHLEFLYDQA 473 (577)
Q Consensus 397 ~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~ 473 (577)
.-.++.++.++++....+.. ..+.+....|.+. ...+.. .+..+..+.+.|+.....+...++++.+..
T Consensus 338 ----~~~~s~~~~~~~l~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~ 409 (477)
T TIGR01301 338 ----LWGIVNIILAICLAATVLVT----YVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRS 409 (477)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH----hhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHc
Confidence 13667777777776666554 1111000011000 111112 255566778899999999999999999999
Q ss_pred Cc--ccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 008096 474 PE--SMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIY 551 (577)
Q Consensus 474 P~--~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 551 (577)
|+ +..|..+|+.|++-.+...+..+..|.+.+..+++ ..+.+.+-++.++++++..++..|+.
T Consensus 410 ~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~---------------~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 410 SNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGG---------------NLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred cccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCC---------------CeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 95 55699999999999999999998888865555321 13446777777888888887777754
No 91
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.80 E-value=4e-17 Score=177.29 Aligned_cols=364 Identities=10% Similarity=0.026 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhh----hccch-hHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----TYAGR-FWTITVASIIYQIGM 98 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laD----r~~Gr-k~~~~~~~~~~~i~~ 98 (577)
..++..++....+.++++.|+++.+|+|..++|.+..+.-+..++..|+.|+++| || || |+.+.++.+..+++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 3566677778888899999999999999999999999999999999999999999 66 77 566777777777776
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCC-CCchhhhhhhhhhhHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWYY 177 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~ 177 (577)
.++....+.+ .+.....+++..++.+++.........++.+|+.++ +| |.+..++-.
T Consensus 92 ~llf~~p~~~----------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~l~~~~~ 149 (473)
T PRK10429 92 FLLFSAHLFE----------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQLVPYPR 149 (473)
T ss_pred HHHHcCCCCC----------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHHHHHHHH
Confidence 5554221010 011233455556677888888899999999999864 34 788888767
Q ss_pred HHHHHHHHHHHHHHHhhcc-------cccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhcc
Q 008096 178 FVMGAAVLVAVTVLVYIQD-------NVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRN 250 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~-------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (577)
...++|+.+.+.+...+.. ..+|+....+.++..++..++.+...++... ++..++.
T Consensus 150 ~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~-~~~~~~~--------------- 213 (473)
T PRK10429 150 FFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS-SDNQVSA--------------- 213 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC-ccccccc---------------
Confidence 7777776666555433221 1245555555544444433333332222100 0000000
Q ss_pred ccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHH
Q 008096 251 LDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILL 330 (577)
Q Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~ 330 (577)
++ .+.+++.. .+...+.|.+...+...+.....
T Consensus 214 ----~~------------------------------------------~~~~~~~~-~~~~~~n~~~~~ll~~~~~~~~~ 246 (473)
T PRK10429 214 ----EG------------------------------------------SHLTLKDI-VALIYKNDQLSCLLGMALAYNIA 246 (473)
T ss_pred ----cc------------------------------------------cCCCHHHH-HHHHhcCHHHHHHHHHHHHHHHH
Confidence 00 00000000 00011112222222221111111
Q ss_pred HHHhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHH
Q 008096 331 ITAYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISV 410 (577)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~ 410 (577)
.........++...... +. ...+.+.....+..+++.++. .++.+|+++|+. +.++.++..
T Consensus 247 ~~~~~~~~~y~~~y~~~-~~-------~~~~~~~~~~~i~~ii~~~~~----~~l~~r~gkk~~-------~~~~~~~~~ 307 (473)
T PRK10429 247 SNIINGFAIYYFTYVIG-DA-------DLFPYYLSYAGAANLVTLILF----PRLVKSLSRRIL-------WAGASIFPV 307 (473)
T ss_pred HHHHhhheeeEEEEECC-CH-------HHHHHHHHHHHHHHHHHHHHH----HHHHHHcCcHHH-------HHHHHHHHH
Confidence 11121122222211111 00 011223333444455555654 447777765542 555665555
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccC-------cccHHHHHH
Q 008096 411 LATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAP-------ESMRSTATA 483 (577)
Q Consensus 411 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P-------~~~rg~~~g 483 (577)
++.+....... ..+.+.+.+++..++.+++.+...+..++++.|..+ ++..|...|
T Consensus 308 ~~~~~~~~~~~-----------------~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 308 LSCGVLLLMGL-----------------AAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHHhc-----------------cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 44443332110 001234445556677888999898999999999876 455677889
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhhcCC
Q 008096 484 LFWTANSIGNYVSTLLVTLVHKFSAG 509 (577)
Q Consensus 484 i~~~~~~lg~~l~~~i~~~v~~~~~~ 509 (577)
...+...+|..+++.+.+.+.+..+.
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999998876643
No 92
>PRK09848 glucuronide transporter; Provisional
Probab=99.79 E-value=7.5e-17 Score=173.95 Aligned_cols=358 Identities=10% Similarity=0.049 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc---cchhHHH-HHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY---AGRFWTI-TVASIIYQIGMF 99 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~~-~~~~~~~~i~~~ 99 (577)
..++..++......++++.|+++.+|++..++|.+.+...+...+..++.|+++||. +||||.. .++.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 366677777777888889999999999999999999999999999999999999995 2666644 555554544444
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
++. .. |... .........++..++.+++.+...+...++..++.++.++ |.+..++-.++
T Consensus 95 ~~~-~~--~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~~~~~~r~~~ 154 (448)
T PRK09848 95 LVF-WV--PTDW------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RARLGAARGIA 154 (448)
T ss_pred HHH-hC--cCCC------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HHHHHHHHHHH
Confidence 332 11 1100 0011233345556677888888888888888888776431 55555554433
Q ss_pred -----HHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCC
Q 008096 180 -----MGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMV 254 (577)
Q Consensus 180 -----~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (577)
..++..++|++.+.........+..+. .+..+++.++.+......++..+.+++.....+.
T Consensus 155 ~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~------------- 220 (448)
T PRK09848 155 ASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVAQPSLKIS------------- 220 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCccCCCHHHH-------------
Confidence 345666666665543221111111111 1112222222222111111100000000000000
Q ss_pred CCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhh-HHHHHHHHHHH
Q 008096 255 SDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGP-IWASGILLITA 333 (577)
Q Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-l~~~~~~~~~~ 333 (577)
+ +.....|.+..... .++....+..
T Consensus 221 ------------------------------------------------~-----~~l~~n~~f~~~~~~~~~~~~~~~~- 246 (448)
T PRK09848 221 ------------------------------------------------L-----QTLKRNRPLFMLCIGALCVLISTFA- 246 (448)
T ss_pred ------------------------------------------------H-----HHHhCCchHHHHHHHHHHHHHHHHH-
Confidence 0 00111122211111 1111111111
Q ss_pred hhccceeEEeeccccccccccccccccchhhhhh-HHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHH
Q 008096 334 YAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFT-MVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLA 412 (577)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~ 412 (577)
......++.... . +.+.....+...+ .+..++..++.+ ++.+|+++|+ .+.+|.++..++
T Consensus 247 ~~~~~~~~~~~~------~--g~~~~~~~~~~~~~~~~~~~~~~l~~----~l~~r~g~~~-------~~~~g~~~~~i~ 307 (448)
T PRK09848 247 VSASSLFYVRYV------L--NDTGLFTVLVLVQNLVGTVASAPLVP----GMVARIGKKN-------TFLIGALLGTCG 307 (448)
T ss_pred HhhhheeeEeee------c--CChHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhCcHH-------HHHHHHHHHHHH
Confidence 111112222111 1 1000011111122 233444555544 4666665433 267787777777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcc-------cHHHHHHHH
Q 008096 413 TLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPES-------MRSTATALF 485 (577)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~-------~rg~~~gi~ 485 (577)
+++..+.. ..+.+..+...++.++|++...+..++...|..|++ .+|.+.|+.
T Consensus 308 ~~~~~~~~--------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~ 367 (448)
T PRK09848 308 YLLFFWVS--------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLF 367 (448)
T ss_pred HHHHHHcC--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHH
Confidence 65554322 124445555667789999999999999999988754 469999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhhcC
Q 008096 486 WTANSIGNYVSTLLVTLVHKFSA 508 (577)
Q Consensus 486 ~~~~~lg~~l~~~i~~~v~~~~~ 508 (577)
++.+.+|..+++.+.+.+.+..+
T Consensus 368 ~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 368 SFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999877653
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=4e-17 Score=179.53 Aligned_cols=140 Identities=14% Similarity=0.064 Sum_probs=127.9
Q ss_pred HhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccc
Q 008096 46 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEAD 125 (577)
Q Consensus 46 ~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (577)
+..+.+.....+..+.+.++..+++++.|.++||+ |||+++.+++++..++.++.+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 56678899999999999999999999999999997 999999999999999999999987
Q ss_pred cchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhH
Q 008096 126 TGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLG 205 (577)
Q Consensus 126 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~ 205 (577)
+++.+++.|++.|++.++...+...+++|+++++. |+.+..+ ......++.+++.+++++.. +||+.++
T Consensus 170 --~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~ 238 (521)
T KOG0255|consen 170 --NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFW 238 (521)
T ss_pred --cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 88889999999999999999999999999999988 9999999 78888888999999999886 7999999
Q ss_pred HHHHHHHHHHHH
Q 008096 206 IPTVAMFLSIIA 217 (577)
Q Consensus 206 ~~~~~~~~~~~~ 217 (577)
+..+..++.++.
T Consensus 239 ~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 239 IISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHH
Confidence 988776655555
No 94
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=2.9e-18 Score=175.13 Aligned_cols=448 Identities=12% Similarity=0.010 Sum_probs=241.3
Q ss_pred CcceehHHHHHHHH---HHHHHHHHHHHHHHHHHHhcC-------CChHHHHHHHHHHhHhhhhchhhhhhhhhhccchh
Q 008096 15 GIITMPFIFANEVC---EKLAVVGFHANMISYLTTQLH-------MPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRF 84 (577)
Q Consensus 15 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~lg-------~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk 84 (577)
.|+.+..++...+. +....+.+....+.+-....| ++....+.+..+..++..++|++.|+++||+ |||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cch
Confidence 67777776663333 333334444444433322322 6677888999999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCch
Q 008096 85 WTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPK 164 (577)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 164 (577)
+++-..++++.+++++++++. |......-++.+...|+++|+|.|+-+|...+..+|..-.+.
T Consensus 115 ~vYG~~liImIi~t~~~~~s~---------------~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~-- 177 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSV---------------GTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT-- 177 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCC---------------CCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc--
Confidence 999999999999999777543 112222467788899999999999999999999999776655
Q ss_pred hhhhhhhhhhH----HHHHHHHHHHHHHHHHHhhccc-----------ccchhhhHHHHHHHHHHHHHHHHccccccccC
Q 008096 165 QATKTWKYFNW----YYFVMGAAVLVAVTVLVYIQDN-----------VGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLN 229 (577)
Q Consensus 165 ~~~~r~~~~~~----~~~~~~ig~~lg~~i~~~l~~~-----------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (577)
|+...+. ..++.-.|++++-++.+-+-.. .=||..|.+.++..++.++. |....+
T Consensus 178 ----RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~------Rl~M~E 247 (538)
T KOG0252|consen 178 ----RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF------RLKMPE 247 (538)
T ss_pred ----ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh------hhcCCc
Confidence 6666555 4444555555555554433221 13898887777654433221 111111
Q ss_pred CCCChhhHHH-HHHHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccch
Q 008096 230 PAGSPFVRLM-QVCVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTV 308 (577)
Q Consensus 230 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (577)
++ ..+.+. +....+..+. .+.. +. -++.++ + . .. +...+..++-+..
T Consensus 248 t~--~Y~al~~~~~~~a~~d~-~k~~-~~--~~~~~~-----~----------------~---~~--~~~~~~~~~~~F~ 295 (538)
T KOG0252|consen 248 TA--RYTALVSKKLKQAAGDM-KKVL-SV--DIEAES-----T----------------A---ES--DVPPPSNSFGLFS 295 (538)
T ss_pred ch--hHHHHhhcCHhhhhhcc-cccc-cc--ccchhh-----c----------------c---cc--CCCCcccccchHH
Confidence 10 000000 0000000000 0000 00 000000 0 0 00 0011111111111
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeeccccccccc-cccccc-cchhhhhhHHHHHHHHHh-hhhhhhhc
Q 008096 309 HRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAKSMDRHLT-KSFQIP-AGSMSVFTMVSMLSTIAL-YDRIIIPV 385 (577)
Q Consensus 309 ~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~ 385 (577)
+...+ . .-.-++.+...|+..........+.|...++...- ++-... .....+........++.+ .-++..-+
T Consensus 296 ~~f~~---~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 296 RLFLR---W-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred HHHHH---H-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 10001 1 11122233333333332222222333222221000 000000 000111111222222222 22333345
Q ss_pred cccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhh
Q 008096 386 ARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGH 465 (577)
Q Consensus 386 ~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~ 465 (577)
.|+++||.. .+.|+.++.+.+++++..- .+ + . ...-.++..-+...+++-.-+.+.
T Consensus 372 id~iGRk~i-------q~~GF~~~~i~~~~~~~~y--------~~-~-------~-~~~Gf~v~y~l~~ff~NFGPn~tt 427 (538)
T KOG0252|consen 372 IDIIGRKYI-------QLMGFFIMTIFFFVIAGPY--------NQ-L-------E-NTIGFVVLYSLTFFFGNFGPNATT 427 (538)
T ss_pred eehhhhHHH-------HHhhHHHHHHHHHHHcCCc--------cc-c-------c-ccCceeehHHHHHHHHhcCCCcee
Confidence 677776553 6778888877766665432 00 0 0 011111222233334555556667
Q ss_pred hhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 008096 466 LEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYF 545 (577)
Q Consensus 466 ~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 545 (577)
..+.+|.+|.+.||++-|+...++-.|+.++........+.. +.+ ..+..+.++.++++.+++.++.+
T Consensus 428 fivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~-------yp~-----~~g~~~v~~i~~~~~~~gi~~T~ 495 (538)
T KOG0252|consen 428 FIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN-------YPP-----NIGVRNVFIILAGCMLLGILFTL 495 (538)
T ss_pred EEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc-------CCc-----cccchHHHHHHHHHHHHhHheeE
Confidence 778999999999999999999999999999999877764421 111 23456778999999999988888
Q ss_pred hhhhccccccccccccCC
Q 008096 546 FCAKIYTFKPIQMHQKGG 563 (577)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~ 563 (577)
++. |.|++..+|.+.+.
T Consensus 496 l~p-Etk~~~leei~~e~ 512 (538)
T KOG0252|consen 496 LIP-ETKGKSLEEISNEE 512 (538)
T ss_pred Eee-cccccCHHHhcChh
Confidence 765 99999988875443
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=8.4e-17 Score=173.40 Aligned_cols=172 Identities=9% Similarity=0.076 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhh----ccch-hHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADT----YAGR-FWTITVASIIYQIGM 98 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr----~~Gr-k~~~~~~~~~~~i~~ 98 (577)
..++..++....+..+++.|+++.+|+|..++|.+..+.-+..++..|+.|+++|| + || |+.+..+.+..+++.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHH
Confidence 35566677777778899999999999999999999999999999999999999999 5 76 455667777777766
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+++....+.+ .......+++..++.+.+..+......++.+|+.++.+ +|.+..++...
T Consensus 95 ~l~f~~p~~~----------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~ 153 (444)
T PRK09669 95 LLTFYTPDFG----------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFA 153 (444)
T ss_pred HHHHhCCCCC----------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHH
Confidence 5544322110 11234555666666777777788888899999886532 17777888777
Q ss_pred HHHHHHHHHHHHHHhhcc-------cccchhhhHHHHHHHHHHHHH
Q 008096 179 VMGAAVLVAVTVLVYIQD-------NVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~-------~~gw~~~f~~~~~~~~~~~~~ 217 (577)
..++|..+++.+...+.. ..||+..+.+.+++.++..++
T Consensus 154 ~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 154 LSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 788887777665433222 246777776666555444433
No 96
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.78 E-value=8.3e-17 Score=174.20 Aligned_cols=386 Identities=15% Similarity=0.131 Sum_probs=222.8
Q ss_pred CCCcceehHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccc-----hhHH
Q 008096 13 KGGIITMPFIFA-NEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAG-----RFWT 86 (577)
Q Consensus 13 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~G-----rk~~ 86 (577)
..+++..+.+++ ..+...+. +.+...++.++.+++|+|.++.+...+...+...+.++ .|.++||+ + ||+.
T Consensus 21 ~~~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~ 97 (468)
T TIGR00788 21 SFHPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWY 97 (468)
T ss_pred cCCcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHH
Confidence 334444444444 77888887 88888899999999999999999999999999999766 99999998 7 7777
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhh
Q 008096 87 ITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQA 166 (577)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 166 (577)
+.++.++.. ......++. + +.......+.+++.+++.+..-.+..++..|..+ ++++.
T Consensus 98 l~~~~~l~~-~~~~~~l~~--~-----------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~- 155 (468)
T TIGR00788 98 LVLSGLLGS-AILYGLLPG--K-----------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSA- 155 (468)
T ss_pred HHHHHHHHH-HHHHHhccc--c-----------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCc-
Confidence 777766553 122222221 0 0123334457888999999999999999999999 44222
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccc-cCCCCChhhHHHHHHHHH
Q 008096 167 TKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRN-LNPAGSPFVRLMQVCVAA 245 (577)
Q Consensus 167 ~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 245 (577)
++...+..+...++|.++|+.++|.+.+.++|+..|++.+...++..+...+..++ ++ ..|+.++...
T Consensus 156 --~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~-~~~~~~~~~~~~~-------- 224 (468)
T TIGR00788 156 --GPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKER-RAFVRPRIGTYLE-------- 224 (468)
T ss_pred --CCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccc-cccccccccccch--------
Confidence 44556666667789999999999999998999999998887776664443333221 10 1111000000
Q ss_pred HhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHH
Q 008096 246 FRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWA 325 (577)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~ 325 (577)
.+.... .....+.. ++ .....| ....++.+...+.+
T Consensus 225 --------------~~~~~~---------------~~~~~~~~---~~----~~~~l~------~~l~~~~i~~~l~f-- 260 (468)
T TIGR00788 225 --------------MNMALL---------------TLGVLANV---KV----QILGLR------GAIQLLEIAKPLIF-- 260 (468)
T ss_pred --------------hhhhhh---------------hhhHHHHH---HH----HHHHHH------HHHhcHHHHHHHHH--
Confidence 000000 00000000 00 000000 00011111111111
Q ss_pred HHHHHHHHhhcc-ceeEEeeccccccccccccc-cccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHH
Q 008096 326 SGILLITAYAQQ-GTFSLQQAKSMDRHLTKSFQ-IPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMG 403 (577)
Q Consensus 326 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 403 (577)
..+.+...... ...+..... .+ +++ ...+.......+..+++..+.++ +.+|+ +..+.+.
T Consensus 261 -ifl~~~~~~~~~~~~f~~~~~----~l--G~s~~~~G~~~~~~~v~~i~g~~~~~~----~~~~~-------~~r~~l~ 322 (468)
T TIGR00788 261 -IFLSYANLPGASGSVFCATTQ----CL--PGGPSFSGMSKVVGNLGSLCGVGGYDR----FLKTF-------PYRLLFG 322 (468)
T ss_pred -HHHHHhhcCCCCceeEEEEcc----cC--CCCcchhhhHHHHHHHHHHHHHHHHHH----HHhhC-------CHHHHHH
Confidence 11101111111 122222111 12 111 12333344444555555555444 44443 2333366
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHH
Q 008096 404 IGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATA 483 (577)
Q Consensus 404 ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~g 483 (577)
++.++.+++.+...... + .++...+ ..+.+.+....++.+++.++...+...++.+..|++.+|+..|
T Consensus 323 ~~~~l~~~~~~~~~~l~-~--~~~~~~g---------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~a 390 (468)
T TIGR00788 323 VTTLLYTLSSLFDLILV-K--RWNLAFG---------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFA 390 (468)
T ss_pred HHHHHHHHHHhCceeee-e--ccccccC---------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHH
Confidence 66666655543321110 0 0110000 0122344455677888888888889999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhhcC
Q 008096 484 LFWTANSIGNYVSTLLVTLVHKFSA 508 (577)
Q Consensus 484 i~~~~~~lg~~l~~~i~~~v~~~~~ 508 (577)
+.+...++|..+++.+.+.+.+..+
T Consensus 391 l~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 391 LLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999998877663
No 97
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.78 E-value=2.1e-17 Score=172.90 Aligned_cols=177 Identities=8% Similarity=-0.022 Sum_probs=149.2
Q ss_pred CCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHH-HHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 14 GGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTK-AANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~-~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
..|+...+++|...+.. -+=...++...|+.+++|+|.+| .+.+.+++..++.++.+++|+++||+ |.|+++.++++
T Consensus 23 ~~W~~~~~~lC~fGF~~-e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l 100 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMA-QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQAL 100 (511)
T ss_pred cchhHHHHHHHHHHHHH-HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 46777777666543332 22345566778999999999999 99999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
.+.+..++++++. +...+.+.|++.|++.|... +...++..++|+++ |+++
T Consensus 101 ~Wsl~t~L~~fa~----------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ra 151 (511)
T TIGR00806 101 SFVCVWLLLLLGT----------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRA 151 (511)
T ss_pred HHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHH
Confidence 9999999999987 67889999999999999999 99999999999887 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccchhhh---HHHHHHHHHHHHHHHHcc
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGL---GIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f---~~~~~~~~~~~~~~~~~~ 222 (577)
.++...+..+|.++++++++++ ..+||++-+ ++......+++++.++..
T Consensus 152 tsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 152 AAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999994 568988655 344445555555555543
No 98
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=2e-17 Score=165.31 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=107.5
Q ss_pred CCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccch
Q 008096 49 HMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQ 128 (577)
Q Consensus 49 g~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (577)
+.+..-+|.+-+.|++...+.++.+|.++||| |||+++..+.+..++...+.+.+. +
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~----------------------~ 120 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR----------------------N 120 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------H
Confidence 34567789999999999999999999999999 999999999999999988888887 6
Q ss_pred hHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 008096 129 LAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQD 196 (577)
Q Consensus 129 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~ 196 (577)
...+.++|++.|+..|- .....++++|.+++++ |+.+++....+..+|.++||.++|++.+
T Consensus 121 F~afv~aR~l~Gi~kgn-l~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGN-LSVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhhccCc-hHHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 66677889999999886 4778899999999988 9999999999999999999999999987
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=1.9e-16 Score=167.17 Aligned_cols=384 Identities=12% Similarity=0.113 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 008096 22 IFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSL 101 (577)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 101 (577)
+-...++..+.+-...++++.|++ +.|+|..|+|.+.+...+...+.+++.|+++||+..+||.+.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 344555555666667789999997 5689999999999999999999999999999998567888877777766655555
Q ss_pred HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHH
Q 008096 102 TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 181 (577)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (577)
.... +.+.++...++..+......|...++..+...++ +++ ++-......
T Consensus 86 ~~~~----------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~--~~~------YG~iRlwGS 135 (400)
T PF03825_consen 86 AFSS----------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDR--GKD------YGRIRLWGS 135 (400)
T ss_pred HHhc----------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc--cCC------CCcchhhhh
Confidence 5443 4555666777778888888889999888877642 223 444444555
Q ss_pred HHHHHHHHH-HHhhccccc---chhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCC
Q 008096 182 AAVLVAVTV-LVYIQDNVG---WNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDP 257 (577)
Q Consensus 182 ig~~lg~~i-~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (577)
+|.+++.+. ++++....+ ....+++.+...++.... .+..|+.+.++..+++.++
T Consensus 136 iGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~-~l~lp~~~~~~~~~~~~~~-------------------- 194 (400)
T PF03825_consen 136 IGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGF-ALFLPKTPPKRSAKESVKK-------------------- 194 (400)
T ss_pred HHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHH-HHhCCCCccccccCCCccc--------------------
Confidence 666666443 222322222 223455554433222211 1222221110000000000
Q ss_pred cccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhh-HHHHHHHHHHHhhc
Q 008096 258 NVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGP-IWASGILLITAYAQ 336 (577)
Q Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-l~~~~~~~~~~~~~ 336 (577)
....+.+ +..+.++...++. .++........+..
T Consensus 195 ---------------------------------------~~~~~~~------~llk~~~~~~Fll~~~l~~~~~~~~~~f 229 (400)
T PF03825_consen 195 ---------------------------------------LLGLDAL------KLLKNPRFLVFLLAAFLIGISHAAYYTF 229 (400)
T ss_pred ---------------------------------------ccchHHH------HHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0111122211111 11112222221111
Q ss_pred cceeEEeecccccccccccccc-ccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHH
Q 008096 337 QGTFSLQQAKSMDRHLTKSFQI-PAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLV 415 (577)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~ 415 (577)
...+ .+... ++.. ..+...++..+.-+..... .+++.+|++ ..+.+.++.+..++-..+
T Consensus 230 ~~~y-------l~~~g--g~~~~~~g~~~~l~~~aEi~~f~~----~~~~~~r~g-------~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 230 FSIY-------LQELG--GYSGSTIGILWALGVVAEIPFFFF----SGRFLKRFG-------IKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHH-------HHHcc--cchhhHHHHHHHHHHHHHHHHHHH----HHHHHHhcC-------HHHHHHHHHHHHHHHHHH
Confidence 1111 11100 1100 1112222222222222222 344555553 445588999999998888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHH-HHhHHHH
Q 008096 416 AGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWT-ANSIGNY 494 (577)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~-~~~lg~~ 494 (577)
++.... +.+..+.......+++|+..+........|+.+.+|++.|++++|+.+. ..++|..
T Consensus 290 ~a~~~~-----------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~ 352 (400)
T PF03825_consen 290 YAYFSD-----------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGA 352 (400)
T ss_pred HHHhcC-----------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHH
Confidence 776630 0001111223345679999999999999999999999999999999884 5899999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 008096 495 VSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKI 550 (577)
Q Consensus 495 l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 550 (577)
+|..+.|.+.|..+..+. -.+..+|.+.+++.++..++++++.|+
T Consensus 353 iG~~igG~l~~~~g~~~~-----------~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 353 IGSLIGGWLYDAFGARGM-----------FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHhcchhh-----------hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999887643221 123345666666666666666666553
No 100
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=3.7e-16 Score=155.15 Aligned_cols=425 Identities=12% Similarity=0.071 Sum_probs=242.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLS 104 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~ 104 (577)
..++.....-.....+..-+.+..|++..|..++......+..+++-.+|.++|++ |||+...+......+..++-..+
T Consensus 85 ~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s 163 (528)
T KOG0253|consen 85 MGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS 163 (528)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC
Confidence 44445555556666677777888899999999999999999999999999999998 99999988876665555554443
Q ss_pred hhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHH
Q 008096 105 AILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAV 184 (577)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 184 (577)
. |+..+.+.|.+.|+|.|+ .|...++-.|..|... |+.-.-.. ....+|.
T Consensus 164 p----------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~ 213 (528)
T KOG0253|consen 164 P----------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQ 213 (528)
T ss_pred C----------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHH
Confidence 3 778899999999999999 8999999999999766 55544444 5678888
Q ss_pred HHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHc--cccccccCCCCChhhHHHHHHHHHHhhccccCCCCCccccc
Q 008096 185 LVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFG--YPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQ 262 (577)
Q Consensus 185 ~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (577)
+++..+.=....++||||..........+.....+.. .+|+...+ +++.+. ...+....+.++..+|.-....+.
T Consensus 214 v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~--G~~~kA-letL~kiArmNg~qlplgvl~~s~ 290 (528)
T KOG0253|consen 214 VFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAK--GDDYKA-LETLHKIARMNGKQLPLGVLESSA 290 (528)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhc--CChHHH-HHHHHHHHHhcCCCCCcceeeeeh
Confidence 8888777666678899987766665433332322222 33333222 222222 223333444455555543333332
Q ss_pred ccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHH-------HHHHHHHhh
Q 008096 263 NEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWAS-------GILLITAYA 335 (577)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~-------~~~~~~~~~ 335 (577)
..+..+++..+....... +.++...... .-..+-||+.+..+.+++. .++.-.-..
T Consensus 291 ~~~~e~e~~~~~~~~~~a---------------~ke~rg~~~n--Llsp~lrkttlllw~iwfgnafsyyg~VLlttelf 353 (528)
T KOG0253|consen 291 IDRQEQEESDLDDSKSSA---------------AKEVRGGTTN--LLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELF 353 (528)
T ss_pred hhhhhhhhhchhhhhhcc---------------ccccccchHh--hcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 221111111111110000 0000000000 0011223333322222221 112212222
Q ss_pred ccc----eeEEeeccccccccccccccc----cchhhhhhHH-HHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHH
Q 008096 336 QQG----TFSLQQAKSMDRHLTKSFQIP----AGSMSVFTMV-SMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGF 406 (577)
Q Consensus 336 ~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~ 406 (577)
|.. .+....+...+....-..... ...+.+..-+ +.++... +.+|+|||+. |..++
T Consensus 354 qsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~--------iverlGRKkT-------Mal~l 418 (528)
T KOG0253|consen 354 QSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGV--------IVERLGRKKT-------MALSL 418 (528)
T ss_pred hccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHH--------HHHHhcchhH-------HHHHH
Confidence 221 111122222222110000000 1111121111 1222323 4445555554 77777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH
Q 008096 407 VISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW 486 (577)
Q Consensus 407 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~ 486 (577)
++..+..++..... +........+..-++....+.+.|.|..|..|+..|+++.|...
T Consensus 419 ~~f~iflfll~~c~----------------------~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcS 476 (528)
T KOG0253|consen 419 ILFGIFLFLLTTCK----------------------TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCS 476 (528)
T ss_pred HHHHHHHHHHHHhc----------------------CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhh
Confidence 77777766655443 11122222334445566777889999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhccccccc
Q 008096 487 TANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFKPI 556 (577)
Q Consensus 487 ~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 556 (577)
.++.+|+.+.|++. ...... ...+ -.++..+.+++.+..+++..|+|+|..
T Consensus 477 smaRIggI~~p~iA-~~~e~s------~sl~------------i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 477 SMARIGGIFSPVIA-MRAELS------TSLP------------IFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hHHhhhhhhhhHHH-HHhccc------eeeh------------HHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999999999997 332211 1111 366777788888888888778777653
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.76 E-value=4e-17 Score=182.36 Aligned_cols=201 Identities=14% Similarity=0.192 Sum_probs=153.8
Q ss_pred CCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 14 GGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
..++.+++.++...+....+.++.......++++++++.++.|++.+.+.+++.++.++.|+++||+ |||+.+.+++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 3444444545555566666677888888889999999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhcCC-C---------------CCCCCCCC-----------Ccccccc--cchhHHHHHHHHHHHhccC
Q 008096 94 YQIGMFSLTLSAILPQ-L---------------RPPPCQGD-----------QVCKEAD--TGQLAILYASLLLAALGSG 144 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~-~---------------~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~~l~g~g~g 144 (577)
++++.+++++...+.. + ....|..+ ..|.... ...+..++++|+++|+|.+
T Consensus 108 ~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~ 187 (633)
T TIGR00805 108 MGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT 187 (633)
T ss_pred HHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC
Confidence 9999999886531110 0 01122111 1222211 1246678899999999999
Q ss_pred CcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccc----------------------cchh
Q 008096 145 GIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNV----------------------GWNW 202 (577)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~----------------------gw~~ 202 (577)
...+...+++.|.+|+++ |++++++++.+..+|..+|+++++++.+.+ +|+.
T Consensus 188 ~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl 261 (633)
T TIGR00805 188 PIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI 261 (633)
T ss_pred cchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence 999999999999999988 999999999999999999999999876532 2777
Q ss_pred hhHHHHHHHHHHHHHHHHc
Q 008096 203 GLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 203 ~f~~~~~~~~~~~~~~~~~ 221 (577)
.|++.+++.++..+.++..
T Consensus 262 ~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 262 GFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7877776665554444443
No 102
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.75 E-value=4.5e-16 Score=169.05 Aligned_cols=150 Identities=11% Similarity=0.150 Sum_probs=119.2
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
.....++..++|-+ ....|+.+...+...+..++.|+++|.| |||..++.+.++..+|.+.++-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34456888899865 6788999999999999999999999998 999999999999999999999876
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN 197 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~ 197 (577)
+...++++-.+.|+|.|... .....++|..|.+. |.....+.....-+....++.++..+..+
T Consensus 130 ----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 192 (599)
T PF06609_consen 130 ----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAH 192 (599)
T ss_pred ----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccC
Confidence 67779999999999977665 45666899998655 66666655554444444566666566556
Q ss_pred ccchhhhHHHHHHHHHHHHHH
Q 008096 198 VGWNWGLGIPTVAMFLSIIAF 218 (577)
Q Consensus 198 ~gw~~~f~~~~~~~~~~~~~~ 218 (577)
.+|||.|++..+...++++..
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 789999999988766665443
No 103
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.74 E-value=2.4e-15 Score=159.16 Aligned_cols=178 Identities=12% Similarity=-0.034 Sum_probs=121.4
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH--HHHhHhhhhchhhh-hhhhhhccchhHHHHHHHHHH-
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTL--TNFGGTGSLTPLIG-AFVADTYAGRFWTITVASIIY- 94 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~--~~~~~~~~~~~~~~-G~laDr~~Grk~~~~~~~~~~- 94 (577)
...+.+..+...+.+....+.+|.|++ +.|.|.++.|.+. ....+...+.+++. ++.+||+ ||||..++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 345556788888888888899999996 5699999999973 45566666666666 6689998 9999876665332
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.+....+++.. +. ......++...++.++..+...+...++..|..++++ ++.+.+
T Consensus 81 ~~~~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~ 136 (390)
T TIGR02718 81 SACLASLALVG--PD----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNA 136 (390)
T ss_pred HHHHHHHHcCC--cc----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHH
Confidence 22222222111 00 0112223344445556666666666777777666554 677778
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
...++..+|..+|+...+++.+.+||+..|++.++..++..+......
T Consensus 137 ~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 137 VQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888999999998888999999999999998887766555544433
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.73 E-value=6.8e-16 Score=165.53 Aligned_cols=396 Identities=14% Similarity=0.111 Sum_probs=240.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhh----hccchhHH-HHHHHHHHHHHHHH
Q 008096 26 EVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----TYAGRFWT-ITVASIIYQIGMFS 100 (577)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laD----r~~Grk~~-~~~~~~~~~i~~~~ 100 (577)
.+..++.......++..|+++.+|+++...+.+..+..+..++..|+.|+++| |+ ||||. +.+|.++.+++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 45566666667778999999999999999999999999999999999999999 77 76665 56777878887777
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
+.... |. ..........+.+..++..++.........++.+|+.++++ +|.+..++-....
T Consensus 89 lf~~~--p~------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~ 149 (428)
T PF13347_consen 89 LFSPP--PA------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFS 149 (428)
T ss_pred hhccc--cc------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHH
Confidence 76531 10 00011133445667777799999999999999999998643 1788888887888
Q ss_pred HHHHHHHHHHHHhhcccc-------cchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccC
Q 008096 181 GAAVLVAVTVLVYIQDNV-------GWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDM 253 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~-------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (577)
.+|.++...+.+.+.+.. +|++...+.+++.++..++..+..|+.+.+++..++..++
T Consensus 150 ~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~--------------- 214 (428)
T PF13347_consen 150 MIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISL--------------- 214 (428)
T ss_pred HHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccccccc---------------
Confidence 888876666655444322 5777777777666655555555444310000000000000
Q ss_pred CCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHH
Q 008096 254 VSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITA 333 (577)
Q Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~ 333 (577)
+..++ ...+.|.....+..... .+..
T Consensus 215 ----------------------------------------------~~~~~-----~~~~nr~~~~l~~~~~~---~~~~ 240 (428)
T PF13347_consen 215 ----------------------------------------------RDSLR-----SLFRNRPFRILLLAFFL---QWLA 240 (428)
T ss_pred ----------------------------------------------ccchh-----hhcccchHHHHHHHHHH---HHhh
Confidence 00000 00111112111111111 1111
Q ss_pred hhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHH
Q 008096 334 YAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLAT 413 (577)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~ 413 (577)
.....+...+ +.+..++ .+...+.+.....+..++..++. .++.+|+++|+. +..+.++.+++.
T Consensus 241 ~~~~~~~~~y---~~~~vl~--~~~~~~~~~~~~~~~~~v~~~~~----~~l~~r~gk~~~-------~~~~~~~~~~~~ 304 (428)
T PF13347_consen 241 FALMNTFLPY---YFTYVLG--NEGLISIFMLIFFVASIVGSPLW----GRLSKRFGKKKV-------YIIGLLLAALGF 304 (428)
T ss_pred hhhhhhHHHH---HHHHHhc--CchhhHHHHHHHHHHHHHHHHHH----HHHHHHccceee-------hhhhHHHHHHHH
Confidence 1100111010 1111111 11112233334455556666664 447777777665 778888888877
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCc-------ccHHHHHHHHH
Q 008096 414 LVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPE-------SMRSTATALFW 486 (577)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~-------~~rg~~~gi~~ 486 (577)
++..+.. ..+.+++.+..++.+++.+......+++..|..+. +..|...|+.+
T Consensus 305 ~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~ 364 (428)
T PF13347_consen 305 LLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNS 364 (428)
T ss_pred HHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhh
Confidence 7666554 13667777888999999999999999999998873 55799999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 008096 487 TANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIY 551 (577)
Q Consensus 487 ~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 551 (577)
....++..+++.+.+.+.+..+...+.. ..+..........++..-++..++..++..++
T Consensus 365 ~~~k~~~~la~~i~g~~l~~~Gy~~~~~-----~q~~~~~~~i~~~~~~~p~~~~~~~~i~~~~y 424 (428)
T PF13347_consen 365 FFIKIGQGLAGAIVGLLLALVGYDANAA-----VQSASALSGIRILFSIVPAIFLLLAIIFMRFY 424 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHhCcCCCcC-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998877664332110 12223333344444444444444444444444
No 105
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.7e-15 Score=164.08 Aligned_cols=419 Identities=15% Similarity=0.091 Sum_probs=254.9
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHA---NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF 99 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~---~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 99 (577)
....|..++..+++.. .+-..++++++.+.++++|+.++......+..++.+.+.||| |.|++.++|.++..+|.+
T Consensus 48 ~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~ 126 (509)
T KOG2504|consen 48 VFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLL 126 (509)
T ss_pred eHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHH
Confidence 3344444444444433 334566778999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHH-HHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYAS-LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+.++++ +++.+++. =++.|+|.|+....+...++.+|+. + |+.+.|+-..
T Consensus 127 lssF~~----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-k------R~lA~Gia~~ 177 (509)
T KOG2504|consen 127 LSSFAT----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-K------RALATGIAVS 177 (509)
T ss_pred HHHHHh----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-H------HHHHHhhhhc
Confidence 999988 56666655 4567999999999999999977763 2 8999999989
Q ss_pred HHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCc
Q 008096 179 VMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPN 258 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (577)
+..+|.++=|.+.-++.+.+|||+.+++...+.+-........+|.....++. ..++... .....+..+.
T Consensus 178 GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~~~~~~~~~~ 247 (509)
T KOG2504|consen 178 GTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------SAASVESTPK 247 (509)
T ss_pred cCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------cccccccccc
Confidence 99999999888999999999999999888877766556656655533322222 0011000 0000000000
Q ss_pred ccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCC--cccccc----hhhhhhhhhhhhhhhHHHHHHHHHH
Q 008096 259 VLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPN--LWRLNT----VHRVEELKSVIRMGPIWASGILLIT 332 (577)
Q Consensus 259 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~k~~~~~~~l~~~~~~~~~ 332 (577)
..+. + . ..+...+.+ ........... ...... +-+... .+..++++.+...+...+..+.+..
T Consensus 248 -~~~~-~--~---~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~ 316 (509)
T KOG2504|consen 248 -PVEL-R--I---SERDSGLKK-LSLSNLATLKR---GPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV 316 (509)
T ss_pred -cccc-c--c---ccCCCCCCc-ccccchhhhhh---CCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 0000 0 0 000000000 00000000000 000000 000000 0111111111111111111222222
Q ss_pred HhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHH
Q 008096 333 AYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLA 412 (577)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~ 412 (577)
.....+.+ .. +.+ ..+...+.+.++..+..+++-++.++ +.|+... +......++++..+++
T Consensus 317 p~~~l~~~-------~~-~~g-~~~~~aa~l~Siigi~~i~gRi~~G~----laD~~~~-----~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 317 PFVYLPSY-------AK-SLG-LSSNDAAFLLSIIGVSDIIGRIILGL----LADKPGI-----RALVLFLLTLLIAGLA 378 (509)
T ss_pred HHHHHHHH-------Hh-hcC-CChhhhHHHHHHHHHhhhhhhhhhhh----hcCcccc-----chHHHHHHHHHHHHHH
Confidence 21111111 11 110 11122445555566666666666555 4554321 2334456777777777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHH
Q 008096 413 TLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIG 492 (577)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg 492 (577)
.+...... +++.++...++.|+..+.........+.+..+.+.-+.+.|+...+.+++
T Consensus 379 ~~~~p~~~----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~ 436 (509)
T KOG2504|consen 379 RLFLPFAT----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIG 436 (509)
T ss_pred HHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHH
Confidence 65555444 56667777788889888888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhh
Q 008096 493 NYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCA 548 (577)
Q Consensus 493 ~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 548 (577)
..++|.+.+.+.|.. ++|...|+..+...+++..++++..
T Consensus 437 ~l~gpPiag~~~d~t----------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 437 ALVGPPIAGLLYDIT----------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHcCcccceeeeecc----------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999988776654 2234447777777777776666554
No 106
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.72 E-value=4.4e-15 Score=150.61 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008096 33 VVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRP 112 (577)
Q Consensus 33 ~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 112 (577)
.....-.+.+++++.+++|..|++++...+..++.+++++.|++.+|+ |+|+.+++|+.+++++..+..=+.
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa------- 99 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAA------- 99 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhh-------
Confidence 356677788999999999999999999999999999999999999998 999999999999999988875333
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 113 PPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
...++..++.+.++.+.|.+....++.++++.+.|+++ -..=+++.+....+|+++||++++
T Consensus 100 ------------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 100 ------------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred ------------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 12367888899999999999999999999999999865 233367777788999999999998
Q ss_pred hhcc
Q 008096 193 YIQD 196 (577)
Q Consensus 193 ~l~~ 196 (577)
++..
T Consensus 162 ~lil 165 (422)
T COG0738 162 SLIL 165 (422)
T ss_pred HHHH
Confidence 8765
No 107
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.71 E-value=2.5e-15 Score=161.26 Aligned_cols=152 Identities=17% Similarity=0.157 Sum_probs=126.5
Q ss_pred HHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccc
Q 008096 44 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKE 123 (577)
Q Consensus 44 l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (577)
+.+++++...+.+.+.++|.++++++.+++|++.||+ .-.+.+....+.+.+-.++.....
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------ 132 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------ 132 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 3467889999999999999999999999999999998 866666666665555444444443
Q ss_pred cccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh------ccc
Q 008096 124 ADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI------QDN 197 (577)
Q Consensus 124 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l------~~~ 197 (577)
+.+.+++.|++.|+.++..+|+...+++.+|.+++ |+.-+++++....+|+++|.++...+ ...
T Consensus 133 ----s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 133 ----SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred ----hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 67789999999999999999999999999999988 99999999999999999999998765 335
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHcccc
Q 008096 198 VGWNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 198 ~gw~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
.||||.|++.+++.++..++.++..|.
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecC
Confidence 699999999998876666555555443
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.71 E-value=6.8e-16 Score=160.66 Aligned_cols=390 Identities=11% Similarity=0.037 Sum_probs=218.7
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH--
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI-- 96 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i-- 96 (577)
.+..-...++..+.+-...++++.++++..|+|.+++|.+.++..+...+.+++.|.++||. |.||-++....+..+
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l~ 87 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLLF 87 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHHH
Confidence 34444455555566667789999999988999999999999999999999999999999998 866654433322222
Q ss_pred HHHHH-HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 97 GMFSL-TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 97 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
+-+.. .+.+.+.. | +.++.++.++..+......... .|.+-++.+|+ .+.=+|-
T Consensus 88 ~pff~~v~~pll~~------------------n---~~lg~iig~i~l~~~f~~~~~~-~Ea~~er~sr~---~~feYG~ 142 (412)
T PF01306_consen 88 GPFFIYVFGPLLQS------------------N---FWLGAIIGGIYLGLVFNAGVPL-SEAYAERVSRR---NGFEYGR 142 (412)
T ss_dssp HHHHHHTHHHHHHT------------------T----HHHHHHTTTTTTTTTTTHHHH-HHHHHHHHHHH---HSS-HHH
T ss_pred HHHHHHHHHHHHHH------------------H---HHHHHHHHHHHHHHHHcccchH-HHHHHHHHHHH---hcCCcch
Confidence 21111 11110000 1 2233333333333333222221 13333222222 3344666
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCC
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVS 255 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (577)
..+...+|.+++..++|.+.+ .+-+..||+.....++..++....++..+++.+..+.
T Consensus 143 ~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~--------------------- 200 (412)
T PF01306_consen 143 ARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA--------------------- 200 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT---------------------
T ss_pred HHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc---------------------
Confidence 667788999999999999875 4556778877665554444444433321111100000
Q ss_pred CCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhh
Q 008096 256 DPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYA 335 (577)
Q Consensus 256 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~ 335 (577)
+ +.+.++.......+....|+......+.......|..+.
T Consensus 201 -~---------------------------------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfd 240 (412)
T PF01306_consen 201 -L---------------------------------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFD 240 (412)
T ss_dssp -S---------------------------------------SS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -c---------------------------------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000000011112222222222233333344433
Q ss_pred -ccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHH
Q 008096 336 -QQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATL 414 (577)
Q Consensus 336 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~ 414 (577)
|.+.++... .+ .-+..+..++..+.+.+++-.+.+-. ..++.+|++ +.+.++++..++++-..
T Consensus 241 qqf~~y~~~~---f~-----~~~~g~~~~G~l~s~~v~~E~~~m~~-~p~li~rig-------~k~~Lllag~i~~iRi~ 304 (412)
T PF01306_consen 241 QQFPIYFASF---FQ-----SAGQGNQMYGYLWSVQVFLEALMMFF-SPWLINRIG-------AKNLLLLAGVIMAIRII 304 (412)
T ss_dssp HHHHHHHHHT---SS-----SHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---hc-----ccccChhHHhHHHHHHHHHHHHHHHH-HHHHHHhcC-------hHhHHHHHHHHHHHHHH
Confidence 333332111 01 11122344444444444333332221 344666664 33337777777777776
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHH-HHHHhHHH
Q 008096 415 VAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALF-WTANSIGN 493 (577)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~-~~~~~lg~ 493 (577)
..++.+ +++++.+.-+++++-..+......-|+.+.+|++..++...+. +...++|.
T Consensus 305 ~~~~~~----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~ 362 (412)
T PF01306_consen 305 GSGFAT----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGI 362 (412)
T ss_dssp HHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHH
T ss_pred HHhhhc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHH
Confidence 666655 7788888999999999999999999999999999999999996 68899999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 008096 494 YVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIY 551 (577)
Q Consensus 494 ~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 551 (577)
.+.+.+.|.++|..+ .+..|++++++.++..++..+..++.
T Consensus 363 ~i~s~~~G~lyd~~G-----------------~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 363 IILSPLAGYLYDRIG-----------------FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHhhhHHhhHhhcC-----------------cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999999988652 24568888888888888877776643
No 109
>PTZ00207 hypothetical protein; Provisional
Probab=99.70 E-value=5.4e-14 Score=153.82 Aligned_cols=175 Identities=11% Similarity=0.023 Sum_probs=128.8
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
.++|..+...+.+..+.. ..|++. .....+++++|+|..|.+++.+... ...+++++.|+++||+ |+|+++.++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g-~~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTS-FMYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 344443333333333332 234444 4455788999999999999988744 4456777899999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
++.++.++++++.+ . ....+.+.+++.|++.|+|.+...+.....+.++|| ++ |+++
T Consensus 100 l~~iG~ll~ala~~--~--------------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a 156 (591)
T PTZ00207 100 VFCLGTLLFALTFQ--E--------------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAV 156 (591)
T ss_pred HHHHHHHHHHHHhc--c--------------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHH
Confidence 99999999998630 0 001378889999999999999999999999999997 45 8999
Q ss_pred hhHHHHHHHHHHHH-HHHHHHhhcccccchhhhHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLV-AVTVLVYIQDNVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 173 ~~~~~~~~~ig~~l-g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~ 216 (577)
.++...+.++|+.+ +++..+++. .+|+..|++.++..++..+
T Consensus 157 ~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 157 VAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 99999999999975 555555654 3577777666665444333
No 110
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.70 E-value=1.2e-14 Score=145.34 Aligned_cols=367 Identities=13% Similarity=0.145 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLT 102 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 102 (577)
+++.+=.+..+-+ ...+...+++++|+|.+++|.+.+.-.++..+.+++..+++.|+ |.++.+..++++.++|..+=.
T Consensus 18 vlia~NLR~~its-vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~ 95 (395)
T COG2807 18 VLIAFNLRPAITS-VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRS 95 (395)
T ss_pred HHHHhccchhhhh-hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHh
Confidence 3333334444433 34445677889999999999999999999999999999999998 999999999999988877665
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHH
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 182 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 182 (577)
.. +...++.+-.+.|.|.+..+...++.+-+.||.+ .+..+++|.+..++
T Consensus 96 ~~-----------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~ 145 (395)
T COG2807 96 LG-----------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGA 145 (395)
T ss_pred cc-----------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHH
Confidence 42 4667899999999999999999999999999965 47889999999999
Q ss_pred HHHHHHHHHHhhcccc-cchhhhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccc
Q 008096 183 AVLVAVTVLVYIQDNV-GWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLY 261 (577)
Q Consensus 183 g~~lg~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (577)
|+.+|+.+...+.++. |||..+.+=+...+++++.++.-..+.+ .++.+..
T Consensus 146 ~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~--~~~~~~~-------------------------- 197 (395)
T COG2807 146 GAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQ--AASIATK-------------------------- 197 (395)
T ss_pred HHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccc--ccccccc--------------------------
Confidence 9999999988888776 7999998888877777777765422111 1110000
Q ss_pred cccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeE
Q 008096 262 QNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFS 341 (577)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~ 341 (577)
...+..-|+ +.......+.+=+....+|+...+.+.++
T Consensus 198 ----------------------------------~~~~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~il 235 (395)
T COG2807 198 ----------------------------------LVSVRKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAIL 235 (395)
T ss_pred ----------------------------------ccccccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 000011221 11111111122233455666666665543
Q ss_pred EeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008096 342 LQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEM 421 (577)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~ 421 (577)
..+. ++. ...+.+.++..+..+........ +.+|..+++ +. ......++.+++.-..+.+
T Consensus 236 i~~G--~sa-------~~aG~llsl~~l~~~~~~ll~P~----la~R~~n~r----~~--~~~~~~~~l~G~~G~~~~P- 295 (395)
T COG2807 236 IDRG--LSA-------AEAGSLLSLMQLAQLPTALLIPL----LARRSKNQR----PL--VVLALLLMLVGLVGLLLAP- 295 (395)
T ss_pred HHcC--CCH-------HHhhhHHHHHHHHHHHHHHHHHH----HHHHhcccc----hH--HHHHHHHHHHHHHHHHHhh-
Confidence 3221 111 12333333333333333332222 444432222 22 3444445555554444443
Q ss_pred HHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccC-cccHHHHHHHHHHHHhHHHHHHHHHH
Q 008096 422 KRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAP-ESMRSTATALFWTANSIGNYVSTLLV 500 (577)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P-~~~rg~~~gi~~~~~~lg~~l~~~i~ 500 (577)
..++++ . .+++|+|.+..+|....++.+..+ ++..+...|+.+..+.+=..+||.++
T Consensus 296 -------------------~~~~~l-w--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~ 353 (395)
T COG2807 296 -------------------GQLPIL-W--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLF 353 (395)
T ss_pred -------------------hhHHHH-H--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhH
Confidence 112221 2 478999999999999988777765 57778888999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008096 501 TLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAK 549 (577)
Q Consensus 501 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 549 (577)
|.++|.+ +.|... +..++...++..++-+...|
T Consensus 354 G~lhDa~-----gsw~~~-----------~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 354 GFLHDAT-----GSWSAP-----------LVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred hHHHHhc-----CChHHH-----------HHHHHHHHHHHHHHHhhcch
Confidence 9999987 455444 56666666666555555433
No 111
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=7.8e-16 Score=154.92 Aligned_cols=149 Identities=13% Similarity=0.062 Sum_probs=136.1
Q ss_pred HhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccc
Q 008096 46 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEAD 125 (577)
Q Consensus 46 ~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (577)
+.++-++++.|++.+.+.+...+..++.|.+.||+ |+|-.+++|..++..+++++++..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~-------------------- 157 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN-------------------- 157 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc--------------------
Confidence 35677899999999999999999999999999998 999999999999999999999987
Q ss_pred cchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhH
Q 008096 126 TGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLG 205 (577)
Q Consensus 126 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~ 205 (577)
+++.++++|.++|+|.++...+..++++|.||++. .|++++|+.-.+..+|-++||..+|.+.+..|.+.+|.
T Consensus 158 --sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFl 230 (464)
T KOG3764|consen 158 --SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFL 230 (464)
T ss_pred --hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHH
Confidence 67779999999999999999999999999999865 18999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcc
Q 008096 206 IPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 206 ~~~~~~~~~~~~~~~~~ 222 (577)
+.+..+++...+-++..
T Consensus 231 VL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 231 VLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHHhee
Confidence 99988877766655443
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.67 E-value=7.5e-14 Score=146.84 Aligned_cols=368 Identities=12% Similarity=0.079 Sum_probs=232.9
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc---cchhH-HHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY---AGRFW-TITVA 90 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~---~Grk~-~~~~~ 90 (577)
++++-+---..++..++.+-....++..|.++.+|+|...+|.+..+.=+.-++.-|+.|.+.||. +||+| -+.++
T Consensus 10 s~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g 89 (467)
T COG2211 10 SLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG 89 (467)
T ss_pred cHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH
Confidence 444444445578888888889999999999999999999999999999999999999999999984 25544 56777
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
.+..++...++..+..+. .+.+....++.-.+.+++.........++.+|+-++.+ +|.
T Consensus 90 ~ip~~i~~~l~F~~p~~~----------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~ 148 (467)
T COG2211 90 AIPFAIVAVLLFITPDFS----------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERA 148 (467)
T ss_pred hHHHHHHHHHHHcCCCcc----------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHH
Confidence 777887777776554111 12355556677888899999999999999999987643 288
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcc-------cccchhhhHHHHHHHHHHHHHHHHccccccccCC-CCC-hhhHHHHH
Q 008096 171 KYFNWYYFVMGAAVLVAVTVLVYIQD-------NVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNP-AGS-PFVRLMQV 241 (577)
Q Consensus 171 ~~~~~~~~~~~ig~~lg~~i~~~l~~-------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 241 (577)
+..++-..+.++|..+...+.+.+.. ..||+..-.+.+++..+.++.+++..+|...++. ..+ ...++.+.
T Consensus 149 ~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~ 228 (467)
T COG2211 149 SLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDS 228 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHH
Confidence 88999888888887776666554432 2366666555555555555554444332111111 100 00110100
Q ss_pred HHHHHhhccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhh
Q 008096 242 CVAAFRKRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMG 321 (577)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 321 (577)
+. ...+.|..+..+
T Consensus 229 ~~------------------------------------------------------------------~~~~Nrp~~~~l 242 (467)
T COG2211 229 FL------------------------------------------------------------------LIFKNRPLLLLL 242 (467)
T ss_pred HH------------------------------------------------------------------HHHccchHHHHH
Confidence 00 011122222222
Q ss_pred hHHHHHHHHHHHhhccceeEEeeccccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhH
Q 008096 322 PIWASGILLITAYAQQGTFSLQQAKSMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHR 401 (577)
Q Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 401 (577)
...+..............++...... +.. ..+...........+++.++ ..++.+|++||+.
T Consensus 243 ~~~l~~~~~~~i~~s~~~yy~~y~lg-~~~------l~~~~~~~~~~~~~l~~~~~----~p~L~~~~gkk~~------- 304 (467)
T COG2211 243 LMNLLLFIAFNIRGSIMVYYVTYVLG-DPE------LFAYLLLLASGAGLLIGLIL----WPRLVKKFGKKKL------- 304 (467)
T ss_pred HHHHHHHHHHHHHhhhhheeEEEEcC-ChH------HHHHHHHHHHHHHHHHHHHh----HHHHHHHhchHHH-------
Confidence 22222222222222222232222111 111 11222222222222333344 3447777776654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccC-------
Q 008096 402 MGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAP------- 474 (577)
Q Consensus 402 ~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P------- 474 (577)
+.+|.++.+++.++.-+.+ ..+.+.+++..++.+++.+...+..|+++.|...
T Consensus 305 ~~~~~~~~~i~~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG 364 (467)
T COG2211 305 FLIGLLLLAVGYLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTG 364 (467)
T ss_pred HHHHHHHHHHHHHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhC
Confidence 7888888888877766654 2244555556688889999999999999888765
Q ss_pred cccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 008096 475 ESMRSTATALFWTANSIGNYVSTLLVTLVHKFS 507 (577)
Q Consensus 475 ~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~ 507 (577)
.+.-|...|...+++-+|.+++..+.+++.+..
T Consensus 365 ~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 365 VRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 366788889999999999999999999987765
No 113
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=5.7e-14 Score=151.93 Aligned_cols=175 Identities=11% Similarity=0.177 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc---cchhHH-HHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY---AGRFWT-ITVASIIYQIGMF 99 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~-~~~~~~~~~i~~~ 99 (577)
..++..++.+..+..++..|+++.+|++...+|.+..+.-+.-++.-|+.|+++||. +||||. +.++.+.++++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 466677777788888999999999999999999999999999999999999999973 377654 5567677777766
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
++......+ .......+++.-++..++..+......++.+|+.++.+ +|.+..++...+
T Consensus 96 llf~~p~~s----------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~ 154 (460)
T PRK11462 96 LAYSTPDLS----------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVL 154 (460)
T ss_pred HHHhCCCCC----------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHH
Confidence 655322000 01123345556667788999999999999999988643 288999999989
Q ss_pred HHHHHHHHHHHHHhhccc-------ccchhhhHHHHHHHHHHHHHHH
Q 008096 180 MGAAVLVAVTVLVYIQDN-------VGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~-------~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
.++|..+++.+...+... .||+....+.+++.++..++.+
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999888887775444332 2466555444444444333333
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.58 E-value=5e-15 Score=142.22 Aligned_cols=147 Identities=11% Similarity=0.117 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 008096 28 CEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAIL 107 (577)
Q Consensus 28 ~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 107 (577)
+.+...|.--.-+..+...+.+.+.++..++.+.++.-..+.+.++|++.||.+|-|..-++-+.+..+|.+..+.-.
T Consensus 54 fgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg-- 131 (459)
T KOG4686|consen 54 FGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG-- 131 (459)
T ss_pred ccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch--
Confidence 344444555566777888888899999999999999999999999999999988988776666777778888887543
Q ss_pred CCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 008096 108 PQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVA 187 (577)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg 187 (577)
...+.|.+.++|++.|+|.-....+-.+++.-+|..+| .+..+|++.....+|+..-
T Consensus 132 -----------------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvN 188 (459)
T KOG4686|consen 132 -----------------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVN 188 (459)
T ss_pred -----------------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceee
Confidence 23378999999999999999888888999999999999 9999999999999999888
Q ss_pred HHHHHhhccccc
Q 008096 188 VTVLVYIQDNVG 199 (577)
Q Consensus 188 ~~i~~~l~~~~g 199 (577)
-.+.+++.+..+
T Consensus 189 f~lm~~ly~~~~ 200 (459)
T KOG4686|consen 189 FLLMPFLYDTMG 200 (459)
T ss_pred eeecHHHHHHHH
Confidence 888888776543
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.55 E-value=7.5e-12 Score=134.95 Aligned_cols=362 Identities=13% Similarity=0.055 Sum_probs=195.2
Q ss_pred HHHHHHHHHhHhhhhchhhhhhhhhhccchhH-HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHH
Q 008096 54 KAANTLTNFGGTGSLTPLIGAFVADTYAGRFW-TITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAIL 132 (577)
Q Consensus 54 ~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (577)
-.++..++..+..++..|+.|-++|+- |+|| .+.+..++..++.+++.+.. +.+++..
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--------------------~~~~~~~ 129 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--------------------PGQWWLA 129 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--------------------cchHHHH
Confidence 346778888999999999999999987 6555 55556666666777777653 2255555
Q ss_pred HHHHHHHHhccCCcccchhhhhhccCCCCCchhhh--------------------hhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 133 YASLLLAALGSGGIRPCVVAFGADQFDETDPKQAT--------------------KTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 133 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
.+..++..++.+.......+++.|..++++..++. .|++..+.-.....+|+++..++.-
T Consensus 130 ~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l 209 (477)
T PF11700_consen 130 LVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISL 209 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 56666667888888899999999999887631111 0166666666667777777766543
Q ss_pred hhccc--------ccchhhhHHHHHHHH-HHHHHHHHcccccc-ccCCCCC-hhhHHHHHHHHHHhhccccCCCCCcccc
Q 008096 193 YIQDN--------VGWNWGLGIPTVAMF-LSIIAFVFGYPLYR-NLNPAGS-PFVRLMQVCVAAFRKRNLDMVSDPNVLY 261 (577)
Q Consensus 193 ~l~~~--------~gw~~~f~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (577)
.+... .+.|..+.+.++.-+ +++..+...+++.+ +..|.+. ..+.-.+.++..+++
T Consensus 210 ~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~------------- 276 (477)
T PF11700_consen 210 LLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE------------- 276 (477)
T ss_pred HHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH-------------
Confidence 33211 224666666555433 33333344333322 1111111 111111111111111
Q ss_pred cccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhH-HHHHHHHHHHhhcccee
Q 008096 262 QNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPI-WASGILLITAYAQQGTF 340 (577)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l-~~~~~~~~~~~~~~~~~ 340 (577)
..+.|.+.+++.- ++..-....... .
T Consensus 277 -------------------------------------------------~~~~~~~~~fLia~~l~~dg~~ti~~-~--- 303 (477)
T PF11700_consen 277 -------------------------------------------------IRKLRQLFLFLIAYFLYSDGVNTIIS-F--- 303 (477)
T ss_pred -------------------------------------------------HHhChHHHHHHHHHHHHHHHHHHHHH-H---
Confidence 1111222222111 111101111000 0
Q ss_pred EEeecccccccccccccccc-chhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 008096 341 SLQQAKSMDRHLTKSFQIPA-GSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFV 419 (577)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~ 419 (577)
...+....+ +++... ..+..+..+..+++..+ ..++.||++.|. .+.+.+++++..+..+...+.
T Consensus 304 ---~~i~a~~~l--g~s~~~l~~~~l~~~i~a~~Ga~~----~g~l~~r~g~k~-----~~~l~~~l~~~~~i~~~g~~G 369 (477)
T PF11700_consen 304 ---AGIYATEVL--GMSTTQLIVFGLVVQIVAIIGALL----FGWLQDRFGPKT-----KRTLLISLILWIIIPLYGLFG 369 (477)
T ss_pred ---HHHHHHHhc--CcCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhCCch-----hHHHHHHHHHHHHHHHHHHHH
Confidence 000111111 111111 11222233334444444 444677766442 122444444443322222221
Q ss_pred HHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHH
Q 008096 420 EMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLL 499 (577)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i 499 (577)
. ..... ...+.+.+.+.-++.|+..+...+..-++..++.|++..+...|++.+.+...+++||++
T Consensus 370 ~-----~~~~~---------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll 435 (477)
T PF11700_consen 370 F-----WPSFF---------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLL 435 (477)
T ss_pred h-----hhccc---------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 012333345556778999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhh
Q 008096 500 VTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFF 546 (577)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 546 (577)
++.+.+.++. ..+-+..+.++.++++++++.
T Consensus 436 ~g~i~~~tg~----------------~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 436 FGLITDATGS----------------QRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHhCC----------------chhHHHHHHHHHHHHHHHHhh
Confidence 9999887632 233355666666666655543
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.54 E-value=1.2e-13 Score=150.92 Aligned_cols=181 Identities=10% Similarity=0.071 Sum_probs=134.8
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
+|+.....+...++..+.+|++..++|.|+++.+|++..+.+++.....++..++.++.|+++||+ |||+.+..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 455544444455667788899999999999999999999989888888899999999999999998 9999988887655
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+.+.... ...+...+++++++.+++.+...+...+++.|.+|++. |+++++
T Consensus 327 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g 381 (490)
T PRK10642 327 FVLAIPAFILI-------------------NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALA 381 (490)
T ss_pred HHHHHHHHHHH-------------------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHH
Confidence 54433322111 01145567788888888777777778888999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc-cchhhhHHHHHHHHHHHHHHHHc
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNV-GWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
+.+....+++.++|.+.+++.+.. +|+.++++..+..++..+..++.
T Consensus 382 ~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 382 AAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 865556677788999999887654 46766665555555554444443
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.51 E-value=3.9e-11 Score=123.24 Aligned_cols=345 Identities=16% Similarity=0.123 Sum_probs=207.9
Q ss_pred HHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccc-----hhH-HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 44 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAG-----RFW-TITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 44 l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~G-----rk~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
|..+++.+..-.+...+...+.+. ..+..|+.||++ + ||. -++.|.+.+..+..+.+++...-.- .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~---~--- 77 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAE---S--- 77 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcc---c---
Confidence 456889999888888887777665 589999999998 5 444 4667777777777777776422110 0
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN 197 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~ 197 (577)
++..............+...+.|+|.+....+..++++|..|+++ |+++.++.+...-+|.+++.++.+.+.+.
T Consensus 78 ~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~ 151 (403)
T PF03209_consen 78 GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDP 151 (403)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 000000111122334455667899999999999999999999988 99999999999999999999999988877
Q ss_pred ccchhhh----HHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccchhhhhhcC
Q 008096 198 VGWNWGL----GIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEELDASICLD 273 (577)
Q Consensus 198 ~gw~~~f----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 273 (577)
++-.-.. .++.+..++..+..+-..++.++..+..+ .
T Consensus 152 ~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~----------------------~----------------- 192 (403)
T PF03209_consen 152 FSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAE----------------------R----------------- 192 (403)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCC----------------------C-----------------
Confidence 6532222 22223333333333333332221110000 0
Q ss_pred CcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhh-HHHHHHHHHHHhhccceeEEeecccccccc
Q 008096 274 GKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGP-IWASGILLITAYAQQGTFSLQQAKSMDRHL 352 (577)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (577)
+..++.+ .|+... ..++..+++. +++....+++ |+...+++-
T Consensus 193 ------~~~~f~~---------------a~~~~~-----~~~~a~~f~~fl~l~t~a~~~-----------QD~iLEPyg 235 (403)
T PF03209_consen 193 ------PRPPFRE---------------AWRQVW-----ASPQARRFFVFLFLGTLAFFM-----------QDVILEPYG 235 (403)
T ss_pred ------CCccHHH---------------HHHHHH-----hCCChhHHHHHHHHHHHHHHh-----------hHHHcCCch
Confidence 0000110 010000 0011111111 1222222222 222233333
Q ss_pred ccccccccc---hhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008096 353 TKSFQIPAG---SMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALA 429 (577)
Q Consensus 353 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~ 429 (577)
+.-++.+.+ .+..+-..+.+++....++ +..|.. ++.+...+|....++++.++....
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~----~l~~~~------~~~~~a~~G~~~~~~~f~lii~a~--------- 296 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGF----LLSRRL------GKKRTAALGCLLGALAFALIILAG--------- 296 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCC------CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 212233333 3334444455555555444 222221 222335677777777776655544
Q ss_pred cCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 008096 430 HGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFS 507 (577)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~ 507 (577)
..-+.+.+....++.|++.+...........++.+++..|+.+|.+..++.++..++..+.+.+.|..
T Consensus 297 ----------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 297 ----------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred ----------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11245667788899999999999999999999999999999999999999999999999999988765
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=1.2e-12 Score=138.86 Aligned_cols=179 Identities=15% Similarity=0.101 Sum_probs=136.5
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+.+++..+..+...+.....++....++|.|+++++|++..+.+++.+...+...++.++.|+++||+ |||+.+..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~ 290 (393)
T PRK15011 212 RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAV 290 (393)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHH
Confidence 33445444444444444455556667899999999999999999998888888888999999999998 99998887766
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
...+....+.+.. +.+.+++.+++.+++.|...+...++..|.+|+ + |+++
T Consensus 291 ~~~~~~~~~~~~~----------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~ 341 (393)
T PRK15011 291 AGVCFYAGMLMAH----------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSA 341 (393)
T ss_pred HHHHHHHHHHHHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchH
Confidence 5555443333322 455566778877777777667777888888874 4 7788
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHc
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
.++++...++|..+||.++|.+.+.+||+..|++..+..+++.+.....
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9998888999999999999999998999999988887777766665543
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.43 E-value=1.4e-12 Score=137.50 Aligned_cols=193 Identities=15% Similarity=0.123 Sum_probs=154.8
Q ss_pred CCCcccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccch-h
Q 008096 7 SHVNRKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGR-F 84 (577)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Gr-k 84 (577)
..+++++.+||.+++.....+...+.+....+-+-.|+++ +.+.+.+..|+++++..++.++..+..|+.+.|. ++ |
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k 102 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVK 102 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcc
Confidence 3445779999999999999999999999999999999986 5889999999999999999999999999999997 64 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCch
Q 008096 85 WTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPK 164 (577)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 164 (577)
+.+++|.++.++|.++.......|. ...+.++++|++.|+|.|. ....-+|+++....+|
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~-----------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d-- 162 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPN-----------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED-- 162 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc-----------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc--
Confidence 8888899999999999844442332 3678899999999999776 4777889999887777
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc------------c-cchhhhHHHHHHHHHHHHHHHHcccc
Q 008096 165 QATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN------------V-GWNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 165 ~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~------------~-gw~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
|.++++....+..+|.++||.+...+... + -+..+-|+.+++.++.++.+.+..++
T Consensus 163 ----R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 163 ----RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred ----hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 88999988888888888888886554321 1 13445567777666666665555544
No 120
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.39 E-value=4.9e-12 Score=134.16 Aligned_cols=168 Identities=13% Similarity=0.081 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008096 27 VCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAI 106 (577)
Q Consensus 27 ~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~ 106 (577)
.+..+.++....+++.|+.+ .|+ .+.++..+.+.++..++.++.|++.||+ |+|+.+..+.++..++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 34455566677788888864 465 3456677788888899999999999998 999999988888888777766543
Q ss_pred cCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHH
Q 008096 107 LPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLV 186 (577)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 186 (577)
+.+.+++.+++.|++.+...|...+...|.+|+++ |+++.++++...++|..+
T Consensus 301 ---------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~ 353 (399)
T PRK05122 301 ---------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGI 353 (399)
T ss_pred ---------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHH
Confidence 45567778889999999888888888889888777 999999999999999999
Q ss_pred HHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccccc
Q 008096 187 AVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYR 226 (577)
Q Consensus 187 g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 226 (577)
++.+.|++.+..||++.|++.++..+++.+......++.+
T Consensus 354 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 354 TGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999899999999888877777666655554433
No 121
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=5e-12 Score=137.22 Aligned_cols=174 Identities=13% Similarity=0.008 Sum_probs=130.9
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
++.+....++....++++..++|.|+++++|+|..++++......++..++.+++|+++||+ |||+.+.....+..++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHH
Confidence 45555566677777788889999999999999999999999999999999999999999998 98887766544444333
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
..+.+.. . .+....++.+++.|++.............|.+|+++ |+++.++.+.
T Consensus 339 ~~~~~~~--~------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~ 392 (467)
T PRK09556 339 TLGVYQH--A------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGT 392 (467)
T ss_pred HHHHHHh--c------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHH
Confidence 2222211 1 134455567777776543333333456679999888 9999999999
Q ss_pred HHHH-HHHHHHHHHHhhcc------------cccchhhhHHHHHHHHHHHHHHH
Q 008096 179 VMGA-AVLVAVTVLVYIQD------------NVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 179 ~~~i-g~~lg~~i~~~l~~------------~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
..++ |..++|.+.|++.+ ..||+..|++..+..+++.+...
T Consensus 393 ~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 393 FAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 9886 77999999999988 57899999888777766655544
No 122
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=8.5e-12 Score=128.58 Aligned_cols=172 Identities=18% Similarity=0.244 Sum_probs=152.3
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhH-HHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFW-TITVASIIYQI 96 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~-~~~~~~~~~~i 96 (577)
.++......++..........+++.++.+.+|.+..+.+++.....++..++.++.|++.||+ |||+ .+..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 344455566777777888889999999988899999999999999999999999999999998 9999 99999999888
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+.+.+.+.. +.+..++..++.|++.+...+...+++.|.+|+++ |++.++++
T Consensus 255 ~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 306 (352)
T cd06174 255 GLLLLALAP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLF 306 (352)
T ss_pred HHHHHHHhc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHH
Confidence 888887654 56778889999999999999999999999999877 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHH
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAF 218 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 218 (577)
+...++|..+++.+.+.+.+..+|+..+++.++..+++.+..
T Consensus 307 ~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 307 NTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999988999999998888777665554
No 123
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.36 E-value=1.4e-11 Score=129.03 Aligned_cols=167 Identities=13% Similarity=0.060 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTL 103 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 103 (577)
...++...........+|.|+++++|.+..+.+++.+...+...++.++.|+++||+ |||+.+.++.++..+......+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 206 VACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHH
Confidence 333444444445566789999999999999999998888778888889999999998 9999988877665555444443
Q ss_pred hhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHH
Q 008096 104 SAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 183 (577)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 183 (577)
.. +.+.+++.+++.|++.+...+...++..|..|+ + ++++.++++...++|
T Consensus 285 ~~----------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 285 DN----------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGRVG 335 (375)
T ss_pred HH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHHHH
Confidence 33 556677778888988888888888888998874 3 568899999999999
Q ss_pred HHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 184 VLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 184 ~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
..++|.+.|++.+..||+..|++.++..+++.+...+
T Consensus 336 ~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 336 WIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999999999999899999999888877766665443
No 124
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.36 E-value=5.2e-12 Score=132.58 Aligned_cols=170 Identities=14% Similarity=0.038 Sum_probs=132.4
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
+++..+......++.....+....++|.|+++++|++..+.+.+.....++..++.++.|+++||+ |||+.+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~ 295 (394)
T TIGR00883 217 HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLA 295 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 333455556677777788888889999999999999999999999999999999999999999998 9999877655544
Q ss_pred HHHHH-HH-HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 95 QIGMF-SL-TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 95 ~i~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
.+... .. .+.. ..+.+.+++..++.+++.+...+...+++.|.+|+++ |+++
T Consensus 296 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~ 349 (394)
T TIGR00883 296 ALLAVPLLMALLD--------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTG 349 (394)
T ss_pred HHHHHHHHHHHhc--------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeE
Confidence 43331 11 1111 1145556677788888888889999999999999887 8888
Q ss_pred hhH-HHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHH
Q 008096 173 FNW-YYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAM 211 (577)
Q Consensus 173 ~~~-~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~ 211 (577)
.++ ++.+..+|..++|.++|++.+..| |+..++......
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 888 455567899999999999998888 887666555443
No 125
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=1.1e-11 Score=131.48 Aligned_cols=168 Identities=17% Similarity=0.145 Sum_probs=132.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF 99 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 99 (577)
+++....++.....+++..++|.|+++++|+|..+.+++.+.+.++..++.+++|+++||+ +||+.+.....+..+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~ 286 (394)
T PRK03699 208 LFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVLMY 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHH
Confidence 3334455566667788889999999999999999999999999999999999999999998 999998877766666555
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
+..... +...+.+..++.|++.+...+...++..|..|++ +++..+.....
T Consensus 287 ~~~~~~----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~ 337 (394)
T PRK03699 287 LFVNTD----------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILTC 337 (394)
T ss_pred HHHHcC----------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHHh
Confidence 444332 3444555667788888888888888888776633 34557777888
Q ss_pred HHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHH
Q 008096 180 MGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 217 (577)
.++|..++|.+.|++.+..||+..+++.++..+++.+.
T Consensus 338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 89999999999999999999999998877766655443
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=7.1e-12 Score=141.24 Aligned_cols=136 Identities=11% Similarity=-0.001 Sum_probs=110.4
Q ss_pred HHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHH
Q 008096 56 ANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYAS 135 (577)
Q Consensus 56 ~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (577)
.....+..++..++.+++|+++||+ |||+++.++.++.+++.++++++. +...+++.
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~----------------------s~~~ll~~ 654 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN----------------------SESAMIAL 654 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc----------------------cHHHHHHH
Confidence 3445566688899999999999998 999999999999888888877755 34456677
Q ss_pred HHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHH
Q 008096 136 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSI 215 (577)
Q Consensus 136 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~ 215 (577)
+++.+++.++..+...++++|++|.+. |++++++.+....+|.++||.+++.+... +...+|++.+++.+++.
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ 727 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGG 727 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 778888888888999999999999887 99999999999999999999999987653 45667777776666655
Q ss_pred HHHHHc
Q 008096 216 IAFVFG 221 (577)
Q Consensus 216 ~~~~~~ 221 (577)
++..+.
T Consensus 728 ll~~~L 733 (742)
T TIGR01299 728 LLALKL 733 (742)
T ss_pred HHHHhC
Confidence 554443
No 127
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=1.4e-11 Score=132.48 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=133.7
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
+++.....+...++..+.+|...++++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 444444445566777888899999999999999999998777777777777888889999999998 9999988887665
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+.+...... ..+...+++..++.+++.+...+...++.+|.+|.+. |+.+.+
T Consensus 327 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g 382 (438)
T PRK09952 327 TLSAFPFFMALEA------------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAG 382 (438)
T ss_pred HHHHHHHHHHHHc------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHh
Confidence 5544433332100 0123344455666788888888888999999999877 888888
Q ss_pred HHH-HHHHHHHHHHHHHHHhhcccc--cchhhhHHHHHHHHHHHHHHHHc
Q 008096 175 WYY-FVMGAAVLVAVTVLVYIQDNV--GWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 175 ~~~-~~~~ig~~lg~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
+.+ .+..+|+.++|.+.+++.+.. +|...+.+.++..+++.+..+..
T Consensus 383 ~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 383 VGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 844 445689999999999987643 47777777766666665555443
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.36 E-value=8.7e-12 Score=130.07 Aligned_cols=168 Identities=11% Similarity=0.092 Sum_probs=135.0
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+....++..+.......+.+.|. +++|.+.++.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHH
Confidence 33444444455555555566667775 56899999999999999999999999999999998 99999999988888887
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+++.+..+ .+...++...++.+++.+...+..+++..|.+|+++ |+++.++++.
T Consensus 285 ~~~~~~~~--------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~ 338 (377)
T TIGR00890 285 AAMLFIPM--------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYT 338 (377)
T ss_pred HHHHHccc--------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHH
Confidence 77665431 122334456777888888888888999999999887 9999999999
Q ss_pred HHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHH
Q 008096 179 VMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLS 214 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~ 214 (577)
..++|..++|.+.|.+.+..||++.|.+.+++.+++
T Consensus 339 ~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 339 AKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999999999999999999999999998877765554
No 129
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.36 E-value=2e-10 Score=117.72 Aligned_cols=344 Identities=13% Similarity=0.037 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHhcCC-------ChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 008096 36 FHANMISYLTTQLHM-------PLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILP 108 (577)
Q Consensus 36 ~~~~l~~~l~~~lg~-------s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 108 (577)
...++|.|+++..+- +.+-.+...++..+..++..|+.|.++|+..-||+.+.+...+..++++++.++.+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~-- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP-- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC--
Confidence 345668888876543 33455677788888888999999999999833666677777777788888887651
Q ss_pred CCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 008096 109 QLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAV 188 (577)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~ 188 (577)
..+++...+...+..++..+......+++.+..++++.+|.++++.+++ .+|+.+.-
T Consensus 112 -----------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~g------ylgs~i~l 168 (438)
T COG2270 112 -----------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALG------YLGSVILL 168 (438)
T ss_pred -----------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccc------cccchHHH
Confidence 1256777777888899999999999999999999887555555444443 34444433
Q ss_pred HHH--Hh-hc---------------ccccchhhhHHHHHHHHHHHHHHHHccccccccC-CCCChhhHHHHHHHHHHhhc
Q 008096 189 TVL--VY-IQ---------------DNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLN-PAGSPFVRLMQVCVAAFRKR 249 (577)
Q Consensus 189 ~i~--~~-l~---------------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 249 (577)
+.+ +. .. +...-|.++.++++..++..+-++...++....+ +..+..+.-.+.+...++
T Consensus 169 i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k-- 246 (438)
T COG2270 169 IFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTFK-- 246 (438)
T ss_pred HHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHHH--
Confidence 332 11 11 1112344444444443333333333332221111 111111110111111111
Q ss_pred cccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHH-HHH
Q 008096 250 NLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWA-SGI 328 (577)
Q Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~-~~~ 328 (577)
...++|.+.+++.-.. ..=
T Consensus 247 ------------------------------------------------------------~i~~~~~i~~FLiA~~~~~D 266 (438)
T COG2270 247 ------------------------------------------------------------EIRGRKNLVLFLIARFFYID 266 (438)
T ss_pred ------------------------------------------------------------HHhcccchHHHHHHHHHHHh
Confidence 1111122221111100 000
Q ss_pred HHHHHhhccceeEEeeccccccccccccccc-cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHH
Q 008096 329 LLITAYAQQGTFSLQQAKSMDRHLTKSFQIP-AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFV 407 (577)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~ 407 (577)
........ .+. +-...+ +++.. -..+.....+..+++..+ ..++.+|++-|++ +.++++
T Consensus 267 Gv~til~~-~~~------fg~~~~--gls~~~lll~g~~~~vvA~lg~ii----~g~Ld~rfg~k~v-------l~~~lv 326 (438)
T COG2270 267 GVNTILAM-GGV------FGAADL--GLSSTELLLIGIALSVVAALGAII----AGFLDERFGSKPV-------LMIGLV 326 (438)
T ss_pred hHHHHHHH-HHH------HHHHHc--CccHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhCCcee-------ehHHHH
Confidence 00000000 000 000001 11111 112233333334444444 3347777765554 677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHH
Q 008096 408 ISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWT 487 (577)
Q Consensus 408 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~ 487 (577)
...+.++...+.. .....++.-++.|...+.....+=++..+++|+++-+...|++++
T Consensus 327 i~~~~~~~~~~~~----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyal 384 (438)
T COG2270 327 ILSIAALYLIFLE----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYAL 384 (438)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhh
Confidence 7666555444443 112223334667777788888888899999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhhcC
Q 008096 488 ANSIGNYVSTLLVTLVHKFSA 508 (577)
Q Consensus 488 ~~~lg~~l~~~i~~~v~~~~~ 508 (577)
.+..+.+++|.+++.+.+.++
T Consensus 385 tgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhc
Confidence 999999999999999988774
No 130
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.35 E-value=7.9e-11 Score=121.26 Aligned_cols=387 Identities=12% Similarity=0.038 Sum_probs=225.5
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 008096 37 HANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQ 116 (577)
Q Consensus 37 ~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (577)
.+.+..|....+| +...+-|..-+|.+.+....+++-|+.|++ |=|.++.++..+..+|..+=.++. .|.+-
T Consensus 64 ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~----- 135 (480)
T KOG2563|consen 64 YAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVP----- 135 (480)
T ss_pred ehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Ccccc-----
Confidence 3455667777788 888889999999999999999999999998 999999999999999988777664 33211
Q ss_pred CCCcccccccchhH--HHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 117 GDQVCKEADTGQLA--ILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 117 ~~~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
...+ +...+-.+.+.+.-++....+-..+-+||+++ |..+..+-.++..+|..+|.++...+
T Consensus 136 ----------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 136 ----------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred ----------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhcccee
Confidence 1334 77788888899888888887888889999998 99999888888778877777666655
Q ss_pred cccc------cchh--hhHHHHHHHHHHHHHHHHccccccccCCCCChhhHHHHHHHHHHhhccccCCCCCcccccccch
Q 008096 195 QDNV------GWNW--GLGIPTVAMFLSIIAFVFGYPLYRNLNPAGSPFVRLMQVCVAAFRKRNLDMVSDPNVLYQNEEL 266 (577)
Q Consensus 195 ~~~~------gw~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 266 (577)
..+. .|.. .|+....+..+.++...+.+++.++.+|..+..+. +
T Consensus 200 V~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~------------~---------------- 251 (480)
T KOG2563|consen 200 VPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL------------Q---------------- 251 (480)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh------------h----------------
Confidence 5432 3543 23323333333333344444443333333211110 0
Q ss_pred hhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHHHHHHHHhhccceeEEeecc
Q 008096 267 DASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQAK 346 (577)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 346 (577)
..++.... .+-.++++.++....+-.....|+....-+.. +
T Consensus 252 --------------~~~f~~si-------------------~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~-----~- 292 (480)
T KOG2563|consen 252 --------------DASFPKSI-------------------KSCFKNRQFIILAICYGIGLGLFNSLSTLLNL-----A- 292 (480)
T ss_pred --------------cCcHHHHH-------------------HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhh-----c-
Confidence 00000000 00112222222222222222233333221110 0
Q ss_pred ccccccccccccccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008096 347 SMDRHLTKSFQIPAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQA 426 (577)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~ 426 (577)
..... .-++.++.......+..++++.+.+. +.||..+ .+..+.+......++...+....
T Consensus 293 l~~sg---Y~~~~aG~ig~l~iv~Gmlga~~~gi----i~Dktk~------fk~~~~v~~~~~~v~~~~l~~~t------ 353 (480)
T KOG2563|consen 293 LCPSG---YEGVFAGYIGALMIVAGMLGALASGI----IADKTKK------FKLTTLVLYLFALVGTLMLLTCT------ 353 (480)
T ss_pred ccccc---CCccccchhHHHHHHHHHHHHHHHHh----hhhhhhh------HHHHHHHHHHHHHHHHHHHHHhh------
Confidence 00111 11134566666666666666666555 6666421 12123333333333321111111
Q ss_pred HHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Q 008096 427 ALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKF 506 (577)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~ 506 (577)
.. .-+.+.++....+.|.+.....|..+++..|..=|..-++..|+.++.+++=+.+-..+.+...+-
T Consensus 354 -~~-----------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~ 421 (480)
T KOG2563|consen 354 -LF-----------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAED 421 (480)
T ss_pred -cc-----------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhc
Confidence 11 123344455556677788888999999999987778889999998888777766666666664432
Q ss_pred cCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhccccccccc
Q 008096 507 SAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFKPIQM 558 (577)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 558 (577)
.+.. +.+.+. -+.++..+++..++..++.+.+++++.|+
T Consensus 422 ~~~~--~~~~~~-----------~i~~~~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 422 LGPP--GNTFPA-----------NIFLTVSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred cCCC--CCCccc-----------hhHhHHHHHHHHHHHhhhhhhHHhHhhhh
Confidence 2111 011111 24556667777777888877777766654
No 131
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.34 E-value=5.4e-11 Score=130.54 Aligned_cols=201 Identities=12% Similarity=0.210 Sum_probs=154.4
Q ss_pred CCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 14 GGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
...+.++.+++...+......+.+......+++.|+++.++.|++.+.+-++..+...+..|.+-|. -|-+.+-+|+++
T Consensus 93 ~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~ 171 (735)
T KOG3626|consen 93 ANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVL 171 (735)
T ss_pred cCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhH
Confidence 3345556666666666666668889999999999999999999999999999999999999999997 788889999999
Q ss_pred HHHHHHHHHHhhhcCCCCC------------------------------CCCCCCCc-c---cccccchhHHHHHHHHHH
Q 008096 94 YQIGMFSLTLSAILPQLRP------------------------------PPCQGDQV-C---KEADTGQLAILYASLLLA 139 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~------------------------------~~~~~~~~-~---~~~~~~~~~~~~~~~~l~ 139 (577)
++++.+++++- +.+. +.|++... | ...+...+.+++++.++.
T Consensus 172 m~lgsll~alP----Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~ 247 (735)
T KOG3626|consen 172 MGLGSLLFALP----HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLL 247 (735)
T ss_pred HHHHHHHHhCh----HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHh
Confidence 99999988853 2111 12222211 1 122223455788999999
Q ss_pred HhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc------------------cc-c
Q 008096 140 ALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN------------------VG-W 200 (577)
Q Consensus 140 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~------------------~g-w 200 (577)
|+|...+++...+|+=|-...++ -..++|+.+....+|.++|.++++++... .| |
T Consensus 248 GIG~Tpi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAW 321 (735)
T KOG3626|consen 248 GIGATPIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAW 321 (735)
T ss_pred hcCCCCCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHH
Confidence 99999999999999999888776 77889999999999999999888875421 23 7
Q ss_pred hhhhHHHHHHHHHHHHHHHHccccc
Q 008096 201 NWGLGIPTVAMFLSIIAFVFGYPLY 225 (577)
Q Consensus 201 ~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (577)
...|++.+.+.+++.+.++++.+++
T Consensus 322 WlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 322 WLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccC
Confidence 7788888877777766666655543
No 132
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.33 E-value=1.9e-11 Score=130.63 Aligned_cols=177 Identities=8% Similarity=0.021 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------hHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMP--------LTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s--------~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
.++...++..........+++.|+++ .|.+ .++.+.+.+...+...++.++.|+++||+ |||+++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34444555444444555777888864 4443 46779999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++..++.... + +..+.+.+++.+++.|++.+...+....++.|.+|+++ |+++
T Consensus 290 ~~~v~~~l~~~~~--~----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~ 345 (418)
T TIGR00889 290 AWALRFGFFAYGD--P----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASA 345 (418)
T ss_pred HHHHHHHHHHHcC--c----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHH
Confidence 8888776666532 0 01134567778999999999988999999999999877 9999
Q ss_pred hhHHH-HHHHHHHHHHHHHHHhhccc------ccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 173 FNWYY-FVMGAAVLVAVTVLVYIQDN------VGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 173 ~~~~~-~~~~ig~~lg~~i~~~l~~~------~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
+++.+ ....+|..+||.++|++.+. +||+.+|.+.+++.++..+.+.+..+
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 56789999999999999876 46999998877766555555444443
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.33 E-value=3.1e-11 Score=128.13 Aligned_cols=170 Identities=10% Similarity=0.013 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChH---HHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSL 101 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg~s~~---~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 101 (577)
..++.........++++.|+.+..+.... ..+.+.+...++..++.++.|+++||+ |||+.+..+.++..++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 305 (408)
T PRK09874 227 TTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPM 305 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHH
Confidence 34444455556667788888765443221 245566667778888899999999998 99999999888777776666
Q ss_pred HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHH
Q 008096 102 TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 181 (577)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (577)
.+.. +.+.+++.+++.|++.+...|...+++.+..|++. |++.+++++...+
T Consensus 306 ~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~ 357 (408)
T PRK09874 306 SFVQ----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRD 357 (408)
T ss_pred HHhc----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHH
Confidence 5543 45667788899999999999999999998888777 8999999999999
Q ss_pred HHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 182 AAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 182 ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
+|..+||.++|++.+.+||++.|++.+++.+++.+..+...+
T Consensus 358 ~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 358 IGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988887777666554433
No 134
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=1.5e-11 Score=125.79 Aligned_cols=180 Identities=16% Similarity=0.161 Sum_probs=146.7
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhcc-chhHHH-HHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYA-GRFWTI-TVASIIY 94 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~-Grk~~~-~~~~~~~ 94 (577)
|.+|++...+++..+.-|++..+.|.|++|..|+|..++++..+.|-.++..++++.||+|||++ |||... ++.++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 45677777889999999999999999999999999999999999999999999999999999987 666654 3444444
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.+..-+++ +.+..+..+..+++|+..-+.+-..-....|..|.+. -|++.|
T Consensus 332 ~~~~~~~w~~~--------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~G 385 (448)
T COG2271 332 TASLVLYWLAP--------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATG 385 (448)
T ss_pred HHHHHHHHcCC--------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhc
Confidence 45555444433 2256777788888888887777666777788888776 889999
Q ss_pred HHHHHHHH-HHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 175 WYYFVMGA-AVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 175 ~~~~~~~i-g~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
+...+..+ |..++....|++.+.+||...|++..+..+++.+++....
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999888 9999999999999999999999988888777766655544
No 135
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.32 E-value=4.4e-12 Score=112.43 Aligned_cols=134 Identities=14% Similarity=0.193 Sum_probs=115.2
Q ss_pred HHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHH
Q 008096 59 LTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLL 138 (577)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (577)
.+.+.++..++.++.|+++||+ |||+.+..+..+..++.+.+.+.. +.+.+.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 60 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS----------------------NITVLIIARFL 60 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc----------------------cHHHHHHHHHH
Confidence 3456678888999999999998 999999999988888887777654 56778889999
Q ss_pred HHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHH
Q 008096 139 AALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAF 218 (577)
Q Consensus 139 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 218 (577)
.|++.+...+...+++.|.+|+++ |++..++.+....+|..++|.+.+++.+..+|++.+++.....++..+..
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 99999999999999999999999999988899999988877666655554
Q ss_pred HHc
Q 008096 219 VFG 221 (577)
Q Consensus 219 ~~~ 221 (577)
...
T Consensus 135 ~~~ 137 (141)
T TIGR00880 135 AFL 137 (141)
T ss_pred hhc
Confidence 443
No 136
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.31 E-value=6.5e-11 Score=125.55 Aligned_cols=175 Identities=12% Similarity=0.021 Sum_probs=135.5
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+....++....+++...++|.|+++ +|+|..+++...+.+.++..++.++.|+++||+ |||+.+..+..+..++.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Confidence 3444445556677888999999999976 899999999999999999999999999999998 99999988887777766
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCC-CCchhhhhhhhhhhHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWYY 177 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~ 177 (577)
.++.... . +.... ..++.|++.+...|.......+.+++ ++ |++.+++.+
T Consensus 285 ~~~~~~~---~------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 335 (393)
T PRK09705 285 CGFIWLP---L------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVAFMQ 335 (393)
T ss_pred HHHHHcc---c------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHHHHH
Confidence 6554322 1 11111 23456888888888887777887753 34 889999999
Q ss_pred HHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHHcccc
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
...+++..++|.+.|++.+..| |+..|++.+...++...+.....++
T Consensus 336 ~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 336 GIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999876 7888888777666665555554443
No 137
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.30 E-value=1.8e-11 Score=130.98 Aligned_cols=160 Identities=12% Similarity=0.045 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 008096 31 LAVVGFHANMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAIL 107 (577)
Q Consensus 31 ~~~~~~~~~l~~~l~~~l---g~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 107 (577)
..+......++.|+.+.+ +.+..+.+++.+...+...++.++.|+++||+ |+|+.+..+.++..++.++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~-- 313 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT-- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc--
Confidence 333344445677776543 67778899999999999999999999999998 999999999988888888877654
Q ss_pred CCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH-HHHHHHHHHHH
Q 008096 108 PQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW-YYFVMGAAVLV 186 (577)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~~l 186 (577)
+.+.+++.+++.+++.+...+....++.|.+|++. |+...+. ++...++|.++
T Consensus 314 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~i 367 (420)
T PRK09528 314 --------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAVF 367 (420)
T ss_pred --------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHHH
Confidence 56677888999999888888888889999998766 6666655 67778999999
Q ss_pred HHHHHHhhcccccchhhhHHHHHHHHHHHHHHH
Q 008096 187 AVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 187 g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
+|.+.|++.+.+||+..|.+.++..++..++..
T Consensus 368 g~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 368 LSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887776655444443
No 138
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.30 E-value=2.8e-13 Score=148.03 Aligned_cols=199 Identities=14% Similarity=0.211 Sum_probs=3.0
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
|.++..++...+.+....+.......-++++|+++.++.|++.+.+.++..+..++..++++|. -|-|.+-.|.+++++
T Consensus 2 k~fl~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 2 KWFLVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHH
Confidence 3445555555555577888888888899999999999999999999999999999999999996 788889999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCC-------------CCcc-------------------cccccchhHHHHHHHHHHHhccC
Q 008096 97 GMFSLTLSAILPQLRPPPCQG-------------DQVC-------------------KEADTGQLAILYASLLLAALGSG 144 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~-------------------~~~~~~~~~~~~~~~~l~g~g~g 144 (577)
|.+++++ |+...++=+. ...| .......+..++++.++.|+|..
T Consensus 81 g~~l~~l----Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~ 156 (539)
T PF03137_consen 81 GSLLFAL----PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGAT 156 (539)
T ss_dssp ---------------------------------------------------------------------------SSS--
T ss_pred HHHHHhc----cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhcccc
Confidence 9988884 4433321000 0111 11122346788899999999999
Q ss_pred CcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc---------------------cc-chh
Q 008096 145 GIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN---------------------VG-WNW 202 (577)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~---------------------~g-w~~ 202 (577)
..++...+|+=|.+++++ -+.+.|+++....+|.++|.++++.+... .| |-.
T Consensus 157 pl~tLG~tYiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWL 230 (539)
T PF03137_consen 157 PLYTLGITYIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWL 230 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccceeeeecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHH
Confidence 999999999999999877 77889999999999999998888754421 23 666
Q ss_pred hhHHHHHHHHHHHHHHHHcccccc
Q 008096 203 GLGIPTVAMFLSIIAFVFGYPLYR 226 (577)
Q Consensus 203 ~f~~~~~~~~~~~~~~~~~~~~~~ 226 (577)
.|.+.+.+.++..+.+..+.++.+
T Consensus 231 Gfli~g~~~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 231 GFLICGILLFLSAIPLFFFPKKLP 254 (539)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCccCC
Confidence 777666666555555555444443
No 139
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=9.7e-11 Score=123.95 Aligned_cols=171 Identities=8% Similarity=-0.004 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 008096 22 IFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSL 101 (577)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 101 (577)
.....++.....++...+++.|+.+.+|+|..+.+++.+.+.++..++.++.|+++||+ |||+.+ .+..+..++....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~~l 287 (390)
T PRK03545 210 LYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHHHH
Confidence 34445555566666778888999888999999999999999999999999999999998 887654 4444444443333
Q ss_pred -HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 102 -TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
.... +.+.+++..++.|++.+...+...+.+.+..| ++ |+++.++++...
T Consensus 288 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~ 338 (390)
T PRK03545 288 LPAAN----------------------SEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGIF 338 (390)
T ss_pred HHHhc----------------------hHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHHH
Confidence 2222 45667778888899888877888888888766 35 788899999889
Q ss_pred HHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 181 GAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
++|..+||.++|++.+.+|++..|++.+++.+++.+......+
T Consensus 339 ~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 339 NIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999988887777766655443
No 140
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.29 E-value=5.5e-11 Score=126.33 Aligned_cols=167 Identities=10% Similarity=-0.030 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTL 103 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 103 (577)
...++.....+....++|.|+++ .|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+..+.+...++.....+
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 34445556667778888999875 799999999999999999999999999999998 9999988876666665555544
Q ss_pred hhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHH
Q 008096 104 SAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 183 (577)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 183 (577)
.. +.+.+.+..++.|++.++..+...++..|.+|+++ |++..++.+....+|
T Consensus 305 ~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g 356 (406)
T PRK11551 305 AP----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLG 356 (406)
T ss_pred cC----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHH
Confidence 32 34455666777888888888899999999999888 999999999999999
Q ss_pred HHHHHHHHHhhcccc-cchhhhHHHHHHHHHHHHHHHH
Q 008096 184 VLVAVTVLVYIQDNV-GWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 184 ~~lg~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
..++|.+.|++.+.. +|...++......+++.++.+.
T Consensus 357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998764 3555555555555554444443
No 141
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.29 E-value=2.3e-11 Score=128.54 Aligned_cols=158 Identities=13% Similarity=0.111 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
.+.....+.....+....++|.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 320 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIP 320 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHH
Confidence 333444445555667778899999999999999999999999999999999999999998 9999988887655332222
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
..... .+.+.+.+..++.++..+...+..++++.|.+|+++ |++++++.+...
T Consensus 321 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~ 373 (405)
T TIGR00891 321 VFAIG---------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLG 373 (405)
T ss_pred HHHhC---------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHH
Confidence 11111 144556666677777777778888899999999888 999999999999
Q ss_pred HHHHHHHHHHHHhhccccc-chhhhHH
Q 008096 181 GAAVLVAVTVLVYIQDNVG-WNWGLGI 206 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~g-w~~~f~~ 206 (577)
++|..++|.+.|++.+..| |+..+..
T Consensus 374 ~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 374 NLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999888 7765544
No 142
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.29 E-value=6.4e-11 Score=129.36 Aligned_cols=150 Identities=17% Similarity=0.138 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 008096 34 VGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPP 113 (577)
Q Consensus 34 ~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 113 (577)
+....++|.|+++++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.++.....
T Consensus 292 ~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 362 (496)
T PRK03893 292 WPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG-------- 362 (496)
T ss_pred chHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc--------
Confidence 34678899999989999999999999999999999999999999998 999998887766555544333221
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 008096 114 PCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVY 193 (577)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~ 193 (577)
..+.+.+.+..++.+....+..+..++++.|.+|+++ |++.+++++...++|..+||.+.|+
T Consensus 363 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~ 424 (496)
T PRK03893 363 ------------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGAL 424 (496)
T ss_pred ------------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHH
Confidence 1133334444444443333445677888999999877 9999999999999999999999999
Q ss_pred hcccccchhhhHHHHHH
Q 008096 194 IQDNVGWNWGLGIPTVA 210 (577)
Q Consensus 194 l~~~~gw~~~f~~~~~~ 210 (577)
+.+.+||+..+.+.+..
T Consensus 425 l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 425 IAQRLDLGTALASLSFS 441 (496)
T ss_pred HhccCChHHHHHHHHHH
Confidence 99999999887655443
No 143
>PRK12382 putative transporter; Provisional
Probab=99.28 E-value=3.7e-11 Score=127.17 Aligned_cols=161 Identities=17% Similarity=0.173 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 008096 28 CEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAIL 107 (577)
Q Consensus 28 ~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 107 (577)
+.......+..+.+.|+++ .|++. .+.....+.++..+++++.|++.||+ |+|+.+..+..+..++.++..+..
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~-- 300 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP-- 300 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc--
Confidence 3445556667778888864 56654 45666777888889999999999998 999999998888888877766543
Q ss_pred CCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 008096 108 PQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVA 187 (577)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg 187 (577)
+.+.+++..++.|++.+...|...+...|.+|+++ |+++.++++....+|..++
T Consensus 301 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 301 --------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred --------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 45566778889999999888888888999998777 9999999999999999999
Q ss_pred HHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 188 VTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 188 ~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
|.+.|++.+..||+..|.+.+...+++.+....
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988877776665544
No 144
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.28 E-value=6.4e-11 Score=124.00 Aligned_cols=177 Identities=13% Similarity=0.031 Sum_probs=129.8
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHH-HHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWT-ITVASIIYQ 95 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~-~~~~~~~~~ 95 (577)
+..+......++.....+.+..++|.|+++.+|.|..+.+++.+...++..++.++.|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3445556677777888888899999999999999999999999999999999999999999998 88861 111111111
Q ss_pred HHH---HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 96 IGM---FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 96 i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
++. ....+..+. ..+.+.......+.+.+.+ ..+...++.+|.+|+++ |+++
T Consensus 294 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~ 348 (399)
T TIGR00893 294 IAGLVLSLLMFATNY------------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLT 348 (399)
T ss_pred HHHHHHHHHHHHhcc------------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHH
Confidence 111 111111100 0123333333444444444 78999999999999888 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~ 219 (577)
.++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..+
T Consensus 349 ~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 349 GGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888 99999888777666555443
No 145
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.27 E-value=1.4e-10 Score=122.42 Aligned_cols=158 Identities=13% Similarity=0.162 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 008096 30 KLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQ 109 (577)
Q Consensus 30 ~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (577)
...+.....++|.|+++ .|.+.++.+++.+...++..+++++.|+++||+ |+|+.+..+.++..++.+... .
T Consensus 213 ~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~--~---- 284 (381)
T PRK03633 213 GIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML--S---- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh--h----
Confidence 33444555678888875 699999999999999999999999999999998 999999888877776654432 1
Q ss_pred CCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 008096 110 LRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVT 189 (577)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 189 (577)
.......+++.|++.+...|...+.+.|..|+++ ++...+.++...++|..+||.
T Consensus 285 -------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 285 -------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred -------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 1123345667777777788999999999888765 667778888888999999999
Q ss_pred HHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 190 VLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 190 i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
++|++.++.||++.|.+.+.+.++..+..+.
T Consensus 340 ~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 340 FTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998877776655544443
No 146
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.25 E-value=3.1e-09 Score=113.67 Aligned_cols=366 Identities=11% Similarity=0.051 Sum_probs=213.9
Q ss_pred ceehHHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCh-HHHHHHHHHH----hHhhhhchhhhhhhhhhccchhHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFH---ANMISYLTTQLHMPL-TKAANTLTNF----GGTGSLTPLIGAFVADTYAGRFWTIT 88 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~---~~l~~~l~~~lg~s~-~~~~~i~~~~----~~~~~~~~~~~G~laDr~~Grk~~~~ 88 (577)
.....+....+...++.+... .....+.....+.+. ...+...... .+...+.++..|.++||| |||..+.
T Consensus 18 ~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~ 96 (463)
T KOG2816|consen 18 ASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLL 96 (463)
T ss_pred chhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHH
Confidence 344455556666666655555 444555555444322 1222333333 577788899999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhh
Q 008096 89 VASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 168 (577)
Q Consensus 89 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (577)
..+....+..+...+.. +|.+. ..-..-+.+...+...++++|....++
T Consensus 97 ~~~~~~~l~~~~~~~~~-----------------------~~~~~--~~~l~g~~~~~~s~~~a~vadis~~~~------ 145 (463)
T KOG2816|consen 97 LPLFGTILPALCLLFQG-----------------------YWFFL--LLGLSGGFSAIFSVGFAYVADISSEEE------ 145 (463)
T ss_pred HHHHHHHHhHHHHHHHH-----------------------HHHhh--hcccccchhhhhhhhhhheeeccchhH------
Confidence 99988888877777643 23222 111233445566777888999988887
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccccccCCCC-ChhhHHHHHHHHHHh
Q 008096 169 TWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNLNPAG-SPFVRLMQVCVAAFR 247 (577)
Q Consensus 169 r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 247 (577)
|...+++.+.....+..++|.+++.+.+..|.-..|.++.+..+++.+......|+...++... .+.++
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~---------- 215 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE---------- 215 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc----------
Confidence 9999999999999999999999999999999999999999888887777666665533322211 00000
Q ss_pred hccccCCCCCcccccccchhhhhhcCCcccccccchhhhhhhhccccccCCCCCcccccchhhhhhhhhhhhhhhHHHHH
Q 008096 248 KRNLDMVSDPNVLYQNEELDASICLDGKLLHTKHMKFLDKAAIVTEEDDIKSPNLWRLNTVHRVEELKSVIRMGPIWASG 327 (577)
Q Consensus 248 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~~~~ 327 (577)
..+.+. .+. ...+++...+. ...+|..+. +....
T Consensus 216 ----~~~~~~-------------------~~~------------------~~~~~~~~~~~--~~~~r~~l~---l~l~~ 249 (463)
T KOG2816|consen 216 ----LTPGSL-------------------DSS------------------HVADAFQSLTK--VGPDRLLLL---LLLVA 249 (463)
T ss_pred ----cCCCcc-------------------cch------------------hhhhhhhhhcc--cCCCccchH---HHHHH
Confidence 000000 000 00011110000 111121111 11111
Q ss_pred HHHHHHhhccceeEEeecccccccccccccc-ccchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHH
Q 008096 328 ILLITAYAQQGTFSLQQAKSMDRHLTKSFQI-PAGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGF 406 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~ 406 (577)
............... ..+.+..+ +++. ..+.+.........+...+.- ..+.+..+.++. +.+|+
T Consensus 250 ~~~~~~~~~~~~~~~--~~yl~~~f--~w~~~~~s~~~~~~~~~~~i~~l~~~---~~l~~~l~~~~~-------i~lGl 315 (463)
T KOG2816|consen 250 FLSSLPEAGGASDVL--LLYLKAKF--GWNKKEFSDLLSLVSILGIISQLLLL---PLLSSILGEKRL-------ISLGL 315 (463)
T ss_pred HHHHHHHhcCceeEE--EEEEeeec--CcCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhhhH-------hhHHH
Confidence 122222211111001 11112222 2221 122233333332222222211 013333333322 78899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH
Q 008096 407 VISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW 486 (577)
Q Consensus 407 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~ 486 (577)
..-.+..+..++.+ +.|..+.. ........+..|..-+++...+.++.+|..+++..
T Consensus 316 ~~~~~~~~~~af~~----------------------~~w~~~~~-~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is 372 (463)
T KOG2816|consen 316 LSEFLQLLLFAFAT----------------------ETWMMFAA-GVVVALAGIVFPAIRAFASILVSPEEQGKVFGIIS 372 (463)
T ss_pred HHHHHHHHHHHHhc----------------------cchhhhHH-HHHHHhhcchhHHHHhHHHhhcccccccchhhHHH
Confidence 88888888888876 44444444 33344457888888999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhc
Q 008096 487 TANSIGNYVSTLLVTLVHKFS 507 (577)
Q Consensus 487 ~~~~lg~~l~~~i~~~v~~~~ 507 (577)
....+.+.+++.+.+.+...+
T Consensus 373 ~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 373 GIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHHhhhhhHHHHHHHHHHH
Confidence 999999999999999887665
No 147
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=7.1e-11 Score=126.13 Aligned_cols=162 Identities=6% Similarity=-0.087 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008096 33 VVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRP 112 (577)
Q Consensus 33 ~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 112 (577)
.++...++|.|+++.+|.+..+.+++.+...++..++.++.|++.||. ++++.+..+.++..++.+++.+..
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 456677889999988999999999999999999999999999999997 888888888877777766665533
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 113 PPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
+.+...+..++.|++.+...+...+++.|.+|++. |++++++++...++|..+||.+.|
T Consensus 311 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 311 ---------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHH
Confidence 55666777888888888877888889999999777 999999999999999999999999
Q ss_pred hhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 193 YIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 193 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
++.+.+|++..++..+...++..++.....+
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 9999989888887766655444444333333
No 148
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.25 E-value=1.6e-10 Score=122.09 Aligned_cols=169 Identities=8% Similarity=-0.042 Sum_probs=142.4
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
|..+......++.........++.+.|+++ +|.|..+.+.+.+...++..+..++.|++.||+ |.|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 334555556666777778888899999965 899999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
...+++++. +.+.+++..++.|+..+...+....++.+. |+++ |+++.+++
T Consensus 283 ~~~~~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~ 333 (382)
T TIGR00902 283 RWAIIGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALY 333 (382)
T ss_pred HHHHHHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHH
Confidence 988888765 678888899999999999999999999987 7666 78888887
Q ss_pred H-HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHH
Q 008096 177 Y-FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 177 ~-~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 217 (577)
+ ....+|..+|+.++|++.+.+|+ ..|.+.+...+++.++
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 6 45689999999999999999886 5566666665555443
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.24 E-value=1.3e-10 Score=124.90 Aligned_cols=177 Identities=11% Similarity=-0.009 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhcc--chhHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYA--GRFWTITVASIIYQIG 97 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~--Grk~~~~~~~~~~~i~ 97 (577)
+.+....++.....+++..++|.|+.+++|+|..+++...+.+.++..++.++.|+++||+. +|+.......+...+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 246 WLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 33344455555666677889999999899999999999999999999999999999999972 2333322222111222
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
........ . .+.....+..++.|++..........+.+|.+|+++ |+++.++.+
T Consensus 326 ~~~~~~~~---~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 379 (434)
T PRK11663 326 VGSLWLMP---F-----------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVG 379 (434)
T ss_pred HHHHHHcc---c-----------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHH
Confidence 11111111 0 022223333334444332222233456688888777 999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
...++|..++|.+.|++.+..||+..|++.+++.+++.+....+.
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888887766655554443
No 150
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.24 E-value=3.6e-09 Score=113.41 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=121.4
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc--cc--hhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 008096 39 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY--AG--RFWTITVASIIYQIGMFSLTLSAILPQLRPPP 114 (577)
Q Consensus 39 ~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~--~G--rk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 114 (577)
-...|+++++|+|+++...+.+...+--.+- ++.|.++|.+ +| ||+-++++.++..++.+.++.....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~------- 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS------- 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-------
Confidence 3456789999999999999888877766665 7789999996 23 5555666777766666666654311
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 115 CQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
..+.....+..++..+|....-..+.++..|....+.. . |+...+..+....+|.+++..+.|.+
T Consensus 83 -----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~-~---~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 83 -----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE-S---RGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred -----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc-h---hHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 12445556677778899999999999999998865431 1 67888888889999999999999999
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 195 QDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 195 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
.+..+++..|.+.+++.++..+...+..+
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999998888776666555444444
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.22 E-value=2.8e-10 Score=121.00 Aligned_cols=175 Identities=13% Similarity=0.061 Sum_probs=129.6
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHH-HHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTIT-VASIIYQIG 97 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~-~~~~~~~i~ 97 (577)
++......++....++++..++|.|++ ++|++..+.+++.+...++..++.++.|+++||+ |||+.+. .+.+...++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~ 301 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHH
Confidence 344455667777888999999999985 5899999999999999999999999999999998 9888764 333333333
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
...+.+..... ..+.+..++..++.|++.+...+ ..+...|..| ++ |++++++++
T Consensus 302 ~~~l~~~~~~~-----------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~------~g~~~g~~~ 356 (402)
T TIGR00897 302 TLALYYIPQHF-----------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KH------KGAAMSVLN 356 (402)
T ss_pred HHHHHHHHHcc-----------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-ch------hHHHHHHHH
Confidence 33333221000 11455566677778887776654 3455666544 45 899999999
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
...++|..++|.+.+.+.+.+||...+++.+++.+++.+...+
T Consensus 357 ~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 357 LSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888777665555443
No 152
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.22 E-value=2.4e-10 Score=123.33 Aligned_cols=187 Identities=15% Similarity=0.122 Sum_probs=152.7
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchh--HHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRF--WTITVASI 92 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk--~~~~~~~~ 92 (577)
+.|.+...++..++.+-+...+......|.++++|+|..+...+....++.+.++.++.|++.||+ |.| +++.++++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 446777777788888899999999999999999999999999999999999999999999999998 988 88888777
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
++.+..+.-.+.. .+.. ....+.+.+++.-++.|+..|..++..-++.+|+.|+++ .+..
T Consensus 358 ~~~~i~~~g~~G~-~~~~-------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~ef 417 (477)
T PF11700_consen 358 LWIIIPLYGLFGF-WPSF-------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEF 417 (477)
T ss_pred HHHHHHHHHHHHh-hhcc-------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHH
Confidence 6633222222100 0100 011256678888889999999999999999999999988 8999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHHcc
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
+|+|.......+.+||++.|.+.+..| -|+.+....++.+++++++....
T Consensus 418 Fgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 418 FGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999998876 88888877777777777765543
No 153
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.21 E-value=1.5e-10 Score=125.21 Aligned_cols=175 Identities=15% Similarity=0.127 Sum_probs=121.5
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhcc-chhHH-HHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYA-GRFWT-ITVASIIYQI 96 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~-Grk~~-~~~~~~~~~i 96 (577)
++...+..++.....+++..++|.|+++++|++..+++++...+.++..++.++.|+++||+. |||+. ....+.+..+
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~ 334 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI 334 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence 444455666666777888999999999999999999999999999999999999999999971 33432 2222333333
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+.+.+.+.. ..+....++..++.|.+.....+....+..|.+|+++ |+++.++.
T Consensus 335 ~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 388 (452)
T PRK11273 335 ATIVYWLNP--------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 388 (452)
T ss_pred HHHHHHHhc--------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHH
Confidence 333322211 0123333344445554433323333456779999888 99999999
Q ss_pred HHHHHHHHHH-HHHHHHhhcccccchhhhHHHHHHHHHHHHHHH
Q 008096 177 YFVMGAAVLV-AVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 177 ~~~~~ig~~l-g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
+...++|+.+ +|.+.|++.+.+||+..|++.++..+++.+...
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9888888654 799999999999999999888776666655443
No 154
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.21 E-value=3.8e-10 Score=115.61 Aligned_cols=80 Identities=8% Similarity=-0.133 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc----------
Q 008096 128 QLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN---------- 197 (577)
Q Consensus 128 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~---------- 197 (577)
++..++++.++.|.|.+..++++.+++++..|+++ +.+.+++......+|..+||++++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 67889999999999999999999999999999877 77889999999999999999999876621
Q ss_pred ------ccchhhhHHHHHHHHH
Q 008096 198 ------VGWNWGLGIPTVAMFL 213 (577)
Q Consensus 198 ------~gw~~~f~~~~~~~~~ 213 (577)
.+|+++|++.+.+.++
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~ 104 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAV 104 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 4688888855554333
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.20 E-value=4.5e-10 Score=122.59 Aligned_cols=179 Identities=12% Similarity=0.039 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH-HHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLT-NFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~-~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
+.+....++.....+....+.+.|+.+++|+|..+.+++.. ...++..++.+++|+++||+ |+|+.+.++.++..++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33344445555666666778888988889999999999985 55678999999999999998 99998877666555544
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+.+......+ .+...+.+..++..++.|...+...++..+..+++. +++.+++.+.
T Consensus 304 l~~~~l~~~~------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s 359 (491)
T PRK11010 304 AGYWLLSITD------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSA 359 (491)
T ss_pred HHHHHHHhcc------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHH
Confidence 3332211000 134444555556555555555677888888888777 6778999999
Q ss_pred HHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 179 VMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
..++|..+++.+.|++.+.+||+..|.+.+++.+++.+.....++
T Consensus 360 ~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 360 LSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999988899999999999999998888888777776665543
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=5.4e-10 Score=115.59 Aligned_cols=179 Identities=12% Similarity=0.095 Sum_probs=148.4
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
+.+.++..+...++...+.|...+|+.+++++..|+|.++.+++...+.++..++.+++|+++|| +.|+++....++.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 34556777778888888999999999999999999999999999999999999999999999998 7888888888888
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
++....+.+.. .+.+...+..++.|++.+......+.-.++..| ++ +..+.+
T Consensus 287 a~~~l~l~~~~---------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~------~~~a~s 338 (394)
T COG2814 287 ALALLALTFTG---------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAP-DA------ADLAGS 338 (394)
T ss_pred HHHHHHHHHhc---------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-Cc------hHHHHH
Confidence 87777776654 145566666777888877766666666666333 33 678899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
++....|+|..+|..++|.+.+++|+....++.++..+++.++.....+
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988888777665544
No 157
>PRK15075 citrate-proton symporter; Provisional
Probab=99.20 E-value=3.2e-10 Score=121.90 Aligned_cols=152 Identities=12% Similarity=0.067 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH-HHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF-SLT 102 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~-~~~ 102 (577)
...++....++.+..++|.|+++.+|++..+.+++...+.++..++.+++|+++||+ |||+.+..+.++..+..+ ...
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH
Confidence 344456667788899999999988999999999999899999999999999999998 999988776554433221 111
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH-H
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM-G 181 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~ 181 (577)
... + ..+........++.+++.+...+....+..|.+|++. |+.+.++.+... .
T Consensus 324 ~~~--~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~ 378 (434)
T PRK15075 324 WLV--A-----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATA 378 (434)
T ss_pred HHH--c-----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHH
Confidence 111 0 0122223333445556666666777788999999888 889999855444 4
Q ss_pred HHHHHHHHHHHhhcccccch
Q 008096 182 AAVLVAVTVLVYIQDNVGWN 201 (577)
Q Consensus 182 ig~~lg~~i~~~l~~~~gw~ 201 (577)
+++.++|.+.+++.+..|++
T Consensus 379 ~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 379 IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHhhhHHHHHHHHHHhcCCc
Confidence 46788999999999888864
No 158
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.19 E-value=1.8e-10 Score=124.53 Aligned_cols=170 Identities=11% Similarity=0.028 Sum_probs=133.1
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc-cchhHHHHHH--HHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY-AGRFWTITVA--SIIYQ 95 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~-~Grk~~~~~~--~~~~~ 95 (577)
++......++..+.++....+++.|++ ++|++..+++++.+...++..++.+++|+++||+ .++|+...++ .++..
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 321 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 344444556666777778889999986 4799999999999999999999999999999984 1334333333 33333
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
++.+++.+.. +.+.+++.+++.|++.+...++..+++.|.+|+++ +++.+++
T Consensus 322 l~~ll~~~~~----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~ 373 (455)
T TIGR00892 322 LTHLLCALAG----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGL 373 (455)
T ss_pred HHHHHHHHhc----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhH
Confidence 4444444333 56777888999999999999999999999999877 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-cchhhhHHHHHHHHHHHHH
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNV-GWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~ 217 (577)
++...++|..+||.++|++.+.. +|++.|++.+++.+++.+.
T Consensus 374 ~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 374 VTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 99999999999999999998877 4999998888776655543
No 159
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.18 E-value=5.5e-10 Score=119.96 Aligned_cols=168 Identities=14% Similarity=0.017 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH-h
Q 008096 26 EVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTL-S 104 (577)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~-~ 104 (577)
.++....+|++..++|.|+.+++|++..+.+...+...++..++.++.|+++||+ |||+.+.++.++..+..+.... .
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677889999999999999999999999999888888889999999999998 9999887766544333322211 1
Q ss_pred hhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHH-H
Q 008096 105 AILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA-A 183 (577)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i-g 183 (577)
.+. .+....+....+...+.+...+...++.+|.+|++. |+.++|+.+...++ +
T Consensus 331 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~ 385 (432)
T PRK10406 331 QNV-------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALF 385 (432)
T ss_pred HcC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHH
Confidence 100 011211211222223333334566788899999988 99999997766553 3
Q ss_pred HHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHH
Q 008096 184 VLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 184 ~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~ 220 (577)
+...|.+.+++. ..| |...+++.++..+++.+...+
T Consensus 386 g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 386 GGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 445777777664 445 555566555555555555444
No 160
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.17 E-value=3.9e-10 Score=121.47 Aligned_cols=166 Identities=13% Similarity=0.049 Sum_probs=120.2
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCC
Q 008096 39 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGD 118 (577)
Q Consensus 39 ~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 118 (577)
+...+..+++|++..+.++......++..++.+++|+++||+ |||+.+.+++++..++.+++.+...... .
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 375 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV-T------- 375 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-C-------
Confidence 334444567899999999999999999999999999999998 9999999998888887777764320000 0
Q ss_pred CcccccccchhHHHHH-HHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc
Q 008096 119 QVCKEADTGQLAILYA-SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN 197 (577)
Q Consensus 119 ~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~ 197 (577)
......+...+.. ..+..+.+. +..+...++..|.+|+++ |+++.++.+...++|.+++|.+.+++.++
T Consensus 376 ---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 376 ---GSSKSSGNVAIVFILLFIAFFAM-GWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred ---CcccchhHHHHHHHHHHHHHHHc-cccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000002222222 222233333 345777788899999877 99999999999999999999999999888
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 198 VGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 198 ~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
.+|++.|++.+++.+++.++..+..+
T Consensus 446 ~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 446 IGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred cCccceehhHHHHHHHHHHHHheecc
Confidence 89999998888777666666554444
No 161
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=8.1e-10 Score=119.94 Aligned_cols=157 Identities=11% Similarity=0.042 Sum_probs=125.2
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.....+...++..........+.|.|++..+|.+..+.+++.....++..++.++.|+++||+ |||+++..+.++..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 445555566666666666666788888888999999999999999999888889999999998 9999999888877777
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
..++.+.. . ..+.+.+.+..++.|++.+...+...++..+.+|+++ ++.++++++
T Consensus 341 ~~~~~~~~---~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~ 395 (471)
T PRK10504 341 SLLFMLVA---L----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLS 395 (471)
T ss_pred HHHHHhcc---c----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHH
Confidence 66665432 0 1133334455667788888888889999999999877 899999999
Q ss_pred HHHHHHHHHHHHHHHhhcccccc
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGW 200 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw 200 (577)
....+|..+|+.++|.+.+..|+
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999988766554
No 162
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.13 E-value=9.4e-10 Score=120.02 Aligned_cols=172 Identities=15% Similarity=0.133 Sum_probs=147.0
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
+..++...++.++....+...+|.+..+.+|.+....|++.+.+.+|+.++.++.+++.+|+ ++++.+..+.++++++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33344444555555556677889999999999999999999999999999999999999998 99999999998888888
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+.++++. +.+...+..++.|++.....+...+.+.+..|++. ||+.++++++
T Consensus 299 ~~lal~~----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~ 350 (524)
T PF05977_consen 299 LLLALSP----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQM 350 (524)
T ss_pred HHHhcch----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHH
Confidence 8888765 67778888899999999999999999999999888 9999999999
Q ss_pred HHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHH
Q 008096 179 VMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
....+..+|.++.|.+.+.+|-+.++.++++..+++.++..
T Consensus 351 ~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888887776655555443
No 163
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.12 E-value=8.9e-10 Score=106.50 Aligned_cols=185 Identities=12% Similarity=0.059 Sum_probs=147.4
Q ss_pred CCCcccCCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHH
Q 008096 7 SHVNRKKGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWT 86 (577)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~ 86 (577)
+..+.++.....++.+...+++..++.+=+.+.-+.++++.+|+|...++.+.+.......+.+++.|.++||+ |++-.
T Consensus 254 pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~ 332 (459)
T KOG4686|consen 254 PKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLW 332 (459)
T ss_pred cccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceeh
Confidence 34456688888999999999999999998999999999999999999999999999999999999999999999 99887
Q ss_pred HHHHH-HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh
Q 008096 87 ITVAS-IIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ 165 (577)
Q Consensus 87 ~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 165 (577)
.+.+. +....+..++.++. +.=+.+..++|+.......+.+.+++...|+++
T Consensus 333 wv~~a~~~tl~~H~~l~Ft~------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~q--- 385 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFFTF------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ--- 385 (459)
T ss_pred hHHHHHHHHHHHhhhHHhhh------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH---
Confidence 65554 44556777777654 223466777888888777778888999999988
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhhccccc---chhhhHHHHHHH-HHHHHHHHHcc
Q 008096 166 ATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVG---WNWGLGIPTVAM-FLSIIAFVFGY 222 (577)
Q Consensus 166 ~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~g---w~~~f~~~~~~~-~~~~~~~~~~~ 222 (577)
.|++++..+.-.|+|-.+-|++.|++.+.-| |--.|.+....+ +.+..+++...
T Consensus 386 ---LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 386 ---LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred ---hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 9999999999999999999999999987654 444555444433 33333344433
No 164
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.10 E-value=8.9e-10 Score=118.59 Aligned_cols=180 Identities=13% Similarity=0.093 Sum_probs=120.8
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
++.+....++.....++...++|.|+++..|+|..+++++...+.+...++.+++|+++||+ ++++....+..+..+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~ 331 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVT 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHH
Confidence 33444455566667788899999999998999999999999999999999999999999998 65442223332222211
Q ss_pred HH-HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 99 FS-LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 99 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
+. ..+.. .+. .+.+......+..|.+..+..........|.+|+++ |+.+.++++
T Consensus 332 ~~~~~~~~-~~~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 387 (438)
T TIGR00712 332 IAVIVYWM-NPA-----------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG 387 (438)
T ss_pred HHHHHHHh-cCC-----------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhc
Confidence 11 11111 000 122333334444454433322222345778899877 999999998
Q ss_pred HHHHHH-HHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 178 FVMGAA-VLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 178 ~~~~ig-~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
...++| .++||.+.|.+.+..||...|++.....+++.+...+..+
T Consensus 388 ~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 388 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred hHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 888876 4689999999999899999998877766666555554443
No 165
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.09 E-value=9e-10 Score=114.40 Aligned_cols=153 Identities=14% Similarity=0.105 Sum_probs=127.2
Q ss_pred ehHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFH-ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
++......++.....+... .+.|.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+.++..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 290 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLA 290 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Confidence 3444445555566666665 7778888878999999999999999999999999999999998 9999998887777776
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
.....+.. + +.+.+++..++.|++.+...+...+++.|.+|+++ |+++.++++
T Consensus 291 ~~~~~~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~ 343 (365)
T TIGR00900 291 ILVVGLTP--------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQF 343 (365)
T ss_pred HHHHHhhc--------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHH
Confidence 66666543 0 26667788899999999999999999999999877 999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccc
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVG 199 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~g 199 (577)
...++|..++|.+.|++.+.+|
T Consensus 344 ~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 344 SLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999987653
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.09 E-value=1.9e-09 Score=117.31 Aligned_cols=171 Identities=8% Similarity=0.029 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhH-------HHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFW-------TITVASII 93 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~-------~~~~~~~~ 93 (577)
.+.+..++.....+.+..++|.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ...+..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~l 334 (476)
T PLN00028 256 ILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQTL 334 (476)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHHH
Confidence 333343444444566777899999999999999999999999999999999999999998 8652 22222222
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
..+..++.+... +.....+..++.+++.+...+...++..+..| +. |+...
T Consensus 335 ~~i~~~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 385 (476)
T PLN00028 335 GGVFCIWLGRAN----------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVIS 385 (476)
T ss_pred HHHHHHHhcccc----------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhh
Confidence 222222222111 33334444455555554445555566666544 33 88889
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
++.+.+.++|+.+++.+.+ .....+|+..|++.+++.+++.++.++.+
T Consensus 386 g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 386 GLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 9987777778777776644 22334699999998887777766666554
No 167
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.08 E-value=2.8e-09 Score=112.54 Aligned_cols=165 Identities=7% Similarity=-0.021 Sum_probs=129.0
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+....++..........+++.|++ +.|++..+.+.+.+...++..+..++.|++.||+ |+|+.+..+.+...++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 344444555555666667788888995 5899999999999999999999999999999998 99999999998888887
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH-
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY- 177 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 177 (577)
++++.++ +.+.+++..++.|++.+...+....+..+. ++++ +++..+.+.
T Consensus 285 ~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~ 335 (382)
T PRK11128 285 GLMGSTT----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSA 335 (382)
T ss_pred HHHHhhh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHH
Confidence 7776554 677788889999999998888888888875 4444 567777765
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHH
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSI 215 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~ 215 (577)
....+|..+||.++|.+.+.+|+. .++..+++.++++
T Consensus 336 ~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 336 LAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 445778899999999999988874 5555555444443
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.07 E-value=2.8e-09 Score=113.94 Aligned_cols=148 Identities=16% Similarity=0.071 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008096 32 AVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLR 111 (577)
Q Consensus 32 ~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 111 (577)
..+.+..++|.|+++ .|++..+.+.+.+...++..++.++.|+++||+ |||+.+..+.++..+..+...... .
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~---~-- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP---Q-- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc---c--
Confidence 334567788999875 699999999999999999999999999999998 999999888877665544443221 0
Q ss_pred CCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 112 PPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
.+...+....+..+.+..+..+..++++.|.+|++. |++++++.+....+|..++|.+.
T Consensus 319 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 319 ---------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred ---------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHH
Confidence 122222222222333334445667788899999877 99999999999999999999999
Q ss_pred HhhcccccchhhhHHH
Q 008096 192 VYIQDNVGWNWGLGIP 207 (577)
Q Consensus 192 ~~l~~~~gw~~~f~~~ 207 (577)
|++.+.+|+....++.
T Consensus 378 g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 378 TWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHcccHHHHHHHH
Confidence 9999888866543333
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.07 E-value=6.3e-09 Score=110.67 Aligned_cols=168 Identities=11% Similarity=-0.067 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTL 103 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 103 (577)
....+.....+....+.|.|+.+++|++..+.++......++..++.++.|+++||+ |+|+.+.++.++..++..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~~ 300 (406)
T PRK15402 222 LALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAAL 300 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455556667788899889999999999988888888889999999999998 9999999998888877777765
Q ss_pred hhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHH
Q 008096 104 SAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 183 (577)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 183 (577)
..... ..+.+.++++.++.|+|.+...+...+..... ++++ |++..+.+++...+|
T Consensus 301 ~~~~~-----------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~~~~~~~ 356 (406)
T PRK15402 301 ATVIS-----------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMGMLSMLI 356 (406)
T ss_pred HHHcc-----------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHHHHHHHH
Confidence 43111 12455567788889999888777766655433 3355 899999999999999
Q ss_pred HHHHHHHHHhhcccccchhhhHHHHHHHHHHHH
Q 008096 184 VLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 184 ~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~ 216 (577)
..+|+.+.+++.+..++....+...+..++...
T Consensus 357 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 357 FTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 999999999998887776555555444444433
No 170
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.06 E-value=2e-09 Score=110.53 Aligned_cols=176 Identities=14% Similarity=0.160 Sum_probs=145.1
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
|+| ++++..+...++.+=+..++.+....|-..++|++..+...+....++.+++++++.|++.||+ |-|+++..+.+
T Consensus 249 ~~~-~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lv 326 (438)
T COG2270 249 RGR-KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLV 326 (438)
T ss_pred hcc-cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHH
Confidence 444 4777778888888888899999999999999999999999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
++.+..+...+.. ....+.+.-++.|...|+.++.+-++.++++|+++ -++.
T Consensus 327 i~~~~~~~~~~~~----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~f 378 (438)
T COG2270 327 ILSIAALYLIFLE----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRF 378 (438)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccce
Confidence 8776655555432 22334555567899999999999999999999988 7889
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAF 218 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~ 218 (577)
+|+|+.....++.+||.+.+.+.+..| -|..+....++..++++.+
T Consensus 379 Fglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 379 FGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred eehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 999999999999999999999887665 5555554444444444443
No 171
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.05 E-value=1.8e-09 Score=115.35 Aligned_cols=162 Identities=9% Similarity=-0.041 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHH-HHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWT-ITVASIIYQIG 97 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~-~~~~~~~~~i~ 97 (577)
+......++....++++.+++|.|+++ ..|+|..+++.+.....++..++.+++|+++||+ +||+. +....++..++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~~~ 323 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAAAG 323 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHHHH
Confidence 344556677778889999999999987 3578899999999999999999999999999998 87664 34343333333
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
. ...... + +....+....+.++|.....+.......|.+|+++ |+.++++.+
T Consensus 324 ~-~~~~~~--~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~ 375 (412)
T TIGR02332 324 W-LLASAT--D-------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVIN 375 (412)
T ss_pred H-HHHHhc--C-------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHH
Confidence 2 222111 0 11111222223333333333444455567788776 999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccc-chhhhHHHHHH
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVA 210 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~ 210 (577)
...++|.+++|.+.|.+.+..| |++.|++.++.
T Consensus 376 ~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 376 ATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999999999999999998775 99988776654
No 172
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.04 E-value=3.1e-09 Score=109.13 Aligned_cols=186 Identities=15% Similarity=0.048 Sum_probs=147.5
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ 95 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (577)
-+..|.+...++...-++-++..++|.|++++++.+..+++.+...+.+.+.+..+.+|+++||+ |.+|+..+....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 46677878888888888899999999999999999999999999999999999999999999999 88887777777777
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
++.....+...... ...+...++...+..++..|.-+.....++...+|++ -+...++
T Consensus 296 ~~~~~l~~~~~~~~---------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~ 353 (417)
T COG2223 296 LAAALLSLFLTGFG---------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGI 353 (417)
T ss_pred HHHHHHHccccccc---------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHH
Confidence 77777665431110 1234555555556666666666677788888888753 6788999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHHcccc
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
.....++|+..-|...+...+..| +..+|++.....+++....+..+.+
T Consensus 354 vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 354 VGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998999998888887 8899988888777777765555443
No 173
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.04 E-value=4.6e-09 Score=114.15 Aligned_cols=160 Identities=13% Similarity=0.017 Sum_probs=114.9
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
.+.|.+ .+++|++.....+......+...++.+++|+++||+ |||+.++.+.++.+++.++++.....+
T Consensus 292 ~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~--------- 360 (479)
T PRK10077 292 YYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ--------- 360 (479)
T ss_pred HHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC---------
Confidence 344444 457899888888888888888899999999999998 999999999999888888776543100
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCC-cccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHh---
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGG-IRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVY--- 193 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~--- 193 (577)
.... ....+.++.+.+.+. ..|...++++|.+|+++ |+++.++.+...++|.++++.+.+.
T Consensus 361 --------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~ 425 (479)
T PRK10077 361 --------APGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDK 425 (479)
T ss_pred --------cccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 0111 222333344444433 34778899999999877 9999999999888888888666543
Q ss_pred ---hcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 194 ---IQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 194 ---l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
+.+.++|++.|++.++..+++.++.+...|
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 426 NSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred ccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 445788988888877766666555544443
No 174
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.03 E-value=6.5e-09 Score=109.72 Aligned_cols=167 Identities=9% Similarity=0.044 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTL 103 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 103 (577)
...++.....+....+++.|+.+.+|+|..+.+++.+...++..++.++.|++.||+ |+|+.+..+..+..++.++...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~ 284 (382)
T PRK10091 206 AATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHH
Confidence 334444455555667778899888999999999999999999999999999999998 9999999888887777665543
Q ss_pred hhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccC-CCCCchhhhhhhhhhhHHHHHHHH
Q 008096 104 SAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQF-DETDPKQATKTWKYFNWYYFVMGA 182 (577)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~i 182 (577)
.. .+.+...+..++.+.|..+..+.......+.. +++. ++.+ ..+...++
T Consensus 285 ~~---------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~ 335 (382)
T PRK10091 285 FG---------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQIAFNL 335 (382)
T ss_pred HH---------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHHHHHH
Confidence 22 02333444555556655544444443333333 3222 3333 33566789
Q ss_pred HHHHHHHHHHhhccc-ccchhhhHHHHHHHHHHHHHHHH
Q 008096 183 AVLVAVTVLVYIQDN-VGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 183 g~~lg~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
|..+||.++|++.+. .+|++.+.+.++..++...+...
T Consensus 336 g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 336 GSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 999999999998875 68999998887766655554443
No 175
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.03 E-value=2.7e-09 Score=111.34 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=117.9
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHH-HHHH-HH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITV-ASII-YQ 95 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~-~~~~-~~ 95 (577)
.++.+....++.....+++..++|.|+.+.+|++..+.+.+.+.+.++..++.++.|+++||+.+||+.... .... ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 344455566666677778888999999999999999999999999999999999999999985234433222 1111 11
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 96 IGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
++....... + ..+.....+..++.|+...+..+....+..|.+|+++ |+++.++
T Consensus 297 ~~~~~~~~~---~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 350 (379)
T TIGR00881 297 VSLLVYWLN---P-----------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGF 350 (379)
T ss_pred HHHHHHhcC---c-----------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHH
Confidence 111111110 0 1133445555666676666666667788999999888 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhh
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWNWGL 204 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~~~f 204 (577)
++...++|..++|.+.|.+.+.+||++.|
T Consensus 351 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 351 VGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999998765
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.03 E-value=6.8e-09 Score=109.83 Aligned_cols=174 Identities=16% Similarity=0.052 Sum_probs=124.7
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhH-hhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.+..+...++...+......+.+.|+.+ +|+|.++.+++...... ...++.+++|++.||+ |+|+.+.++.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3444445556666666777788889975 79999999999888765 5566789999999998 9999998877665333
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCC-CCchhhhhhhhhhhHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWY 176 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~ 176 (577)
.+......+... ..+....+....+.+++.+...+...++..+..++ +. +++.++.+
T Consensus 288 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~ 345 (390)
T TIGR02718 288 ALLWFAQAAFWL----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAV 345 (390)
T ss_pred HHHHHHHHHccc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHH
Confidence 222221110000 01223334444555667777778888888777765 45 78899999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHH
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSII 216 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~ 216 (577)
+...++|..+||.++|++.+..||+..|++.+++.+++.+
T Consensus 346 ~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 346 QSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999989999998887766555443
No 177
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.02 E-value=4.5e-09 Score=107.70 Aligned_cols=160 Identities=11% Similarity=0.069 Sum_probs=121.1
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
.++.....++....-.++..+++.|+.+. +|++.++.++..+.+..+.+++.++++++.||+ |+|+.+.++.++..+
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 33333333443334457788899999854 799999999999999999999999999999998 999998888877777
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+.++..... +.. ...+.++.|++.+..+|...++..+.+|++. +.+.++.
T Consensus 221 ~~~l~~~~~----------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~ 270 (310)
T TIGR01272 221 LSIGAALTH----------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL 270 (310)
T ss_pred HHHHHHHcC----------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH
Confidence 665444322 111 2235557899999999999999999888542 2333443
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhhhHHHHHH
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVA 210 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~ 210 (577)
....+|+.++|.+.|.+.+..|.+.+|++..++
T Consensus 271 -~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 271 -CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred -HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 456799999999999999988988888765554
No 178
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.02 E-value=5e-09 Score=111.07 Aligned_cols=164 Identities=12% Similarity=0.084 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSL 101 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~l---g~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 101 (577)
..++....+......++.|+++.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++..++..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~ 301 (396)
T TIGR00882 223 YVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGS 301 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHH
Confidence 333344444445556788887765 55667788888888889999999999999998 99999999988888877766
Q ss_pred HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH-HHHHH
Q 008096 102 TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW-YYFVM 180 (577)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~ 180 (577)
+++. +.+.+++..++.|++..........+..+.++++. ++...+. ++...
T Consensus 302 ~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~~~~~ 353 (396)
T TIGR00882 302 SFAT----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGFQFAK 353 (396)
T ss_pred HhcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHHHHHH
Confidence 6543 55667778888888866555555556666666544 5665655 56778
Q ss_pred HHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHH
Q 008096 181 GAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 181 ~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 217 (577)
.+|..+++.++|++.+.+||+.+|.+.++..++..+.
T Consensus 354 ~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 354 QLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887776554443
No 179
>PRK10054 putative transporter; Provisional
Probab=99.01 E-value=5.4e-09 Score=110.93 Aligned_cols=174 Identities=10% Similarity=-0.009 Sum_probs=132.2
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTT--QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIY 94 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (577)
|..+......++..+.......+++.|+.+ +.+.+....+.+...........+++.|++.||+ ++|+.+..++++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 345555555666555555555566677653 3466777778888888888888888999999998 9999999998888
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++.....++. .+.+.+.+..++.++|.+...|...+++.+..|++. |+++++
T Consensus 285 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~ 337 (395)
T PRK10054 285 VIGLVGFIFSG---------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFS 337 (395)
T ss_pred HHHHHHHHHcc---------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHh
Confidence 88777666532 145566777889999999888999999999999877 788887
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHH
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
.+. ...+|..+||.++|++.+..|....|++.+....++++..+
T Consensus 338 ~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 338 AQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 654 56689999999999999999988888776666555555544
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.01 E-value=3e-09 Score=115.73 Aligned_cols=156 Identities=13% Similarity=0.114 Sum_probs=128.6
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
+.+.......++..+.+++...++|.|+++.+|+|..+.+++.....++..++.++.|++.||+ |||+.+.++.++..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3444555566777788888889999999999999999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+..++.+... + ..+.+.+....++.|+|.+...+.......+.+|+++ |+.+.+++
T Consensus 334 ~~~~~~~~~~-~-----------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~ 389 (485)
T TIGR00711 334 GFYWRAFTFT-P-----------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLS 389 (485)
T ss_pred HHHHHhccCC-C-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHH
Confidence 7776663210 0 1144556667788999999888888888888888777 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 008096 177 YFVMGAAVLVAVTVLVYIQDN 197 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~ 197 (577)
+...++|..+|+.+.+.+.++
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888654
No 181
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.00 E-value=4.6e-09 Score=114.94 Aligned_cols=154 Identities=8% Similarity=0.008 Sum_probs=129.5
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
|.+.......++....+++...++|.|+++.+|+|..+++.......++..++.++.|++.||+ |+|+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3445555666777777888889999999999999999999999999999999999999999998 999999989888888
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
+.+++.... .. .+.+......++.|+|.|...+....++.+..|+++ ++.+.+.+
T Consensus 338 ~~~~l~~~~-~~------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~ 392 (495)
T PRK14995 338 SFYGLAMTD-FS------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIE 392 (495)
T ss_pred HHHHHHHhc-CC------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHH
Confidence 777665432 11 134445667888999999999999999999999887 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 008096 177 YFVMGAAVLVAVTVLVYIQD 196 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~ 196 (577)
+...++|..+|+.+.+.+.+
T Consensus 393 ~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 393 TMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888854
No 182
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=1.5e-08 Score=107.76 Aligned_cols=154 Identities=11% Similarity=0.198 Sum_probs=108.1
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHh-HhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQ 116 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~-~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (577)
.+.+.|+.+++|++.++.+++.+... ++..++.+++|++.||+ |+|+.+.++.++..+..+.+......+.
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~~------- 301 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTPK------- 301 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 44556777889999999999987654 45788899999999998 9999888777766655444332210111
Q ss_pred CCCcccccccchhHHHHHHH----HHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 117 GDQVCKEADTGQLAILYASL----LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
+.+.+++.. +..|++.+...+....++.+.+|.++ .++++....+|..+++.++|
T Consensus 302 -----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 302 -----------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YALLSALASVGRVYVGPTSG 360 (402)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HHHHHHHHHHHHHHHHHHHH
Confidence 334444443 34566666667777778887777544 34445555677776677899
Q ss_pred hhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 193 YIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 193 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
.+.+.+||+..|.+.+++.+++.++...
T Consensus 361 ~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 361 YLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888877776555443
No 183
>TIGR00895 2A0115 benzoate transport.
Probab=98.98 E-value=4e-09 Score=110.92 Aligned_cols=146 Identities=14% Similarity=0.040 Sum_probs=114.4
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+.+..++....++....++| ++.+++|++..+.+.+.+...++..++.++.|+++||+ |||+.+.... +..+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~~ 328 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLL-LGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHH-HHHHHH
Confidence 34444555666677777778887 66678999999999999999999999999999999998 9885544333 333333
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
.++.... .+....++..++.|++.+...+...+++.|.+|+++ |++++++.+.
T Consensus 329 ~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~ 381 (398)
T TIGR00895 329 VLVGSTL---------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIG 381 (398)
T ss_pred HHHHHHh---------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHH
Confidence 3332211 134556677788999999999999999999999877 9999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 008096 179 VMGAAVLVAVTVLVYI 194 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l 194 (577)
...+|..+||.+.|++
T Consensus 382 ~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 382 IGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhHHhc
Confidence 9999999999998875
No 184
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.98 E-value=3e-09 Score=114.05 Aligned_cols=161 Identities=16% Similarity=0.113 Sum_probs=123.6
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.++.++...++.....+....+.+.|.+..++ +..+.+++.+...++..++.++.|+++||+ |+|+++.++.++..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 34445556666666666665566666665566 666778888888999999999999999998 9999999998888887
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCch-hhhhhhhhhhHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWY 176 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~ 176 (577)
.+.+.+.. .+.+.+++..++.|++.+...+...++++|..+.++.+ .++.++.+++++
T Consensus 301 ~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 301 YLIFFFAG---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred HHHHHHcc---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 76665532 14555667778889999999999999999988754321 122368899999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccch
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGWN 201 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw~ 201 (577)
++...+|..+++.+.|++.+..||.
T Consensus 360 ~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 360 TFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999988777764
No 185
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=1.3e-08 Score=106.24 Aligned_cols=152 Identities=12% Similarity=0.032 Sum_probs=116.6
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+.....+....+++...++|.|+++ +|+|..+.+.+.+.+.++..+++++.|+++||+.+||+.+.++.++..++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 3444445555667778888999999975 799999999999999999999999999999998346667777777777777
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+.+.+.. +.... ...++.|++.|...|...+.+.+..++++ + ++...++.+.
T Consensus 278 ~~~~~~~----------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~--~---~g~~~~~~~~ 329 (355)
T TIGR00896 278 CGLLFAP----------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA--Q---AAALSAMAQS 329 (355)
T ss_pred HHHHHhh----------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH--H---HHHHHHHHHH
Confidence 7666543 11111 23467899999999988887776555422 1 6778888888
Q ss_pred HHHHHHHHHHHHHHhhccccc
Q 008096 179 VMGAAVLVAVTVLVYIQDNVG 199 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~~~g 199 (577)
..++|..++|.+.|++.+..|
T Consensus 330 ~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 330 IGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 889999999999999988775
No 186
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.95 E-value=2.3e-07 Score=94.21 Aligned_cols=153 Identities=14% Similarity=0.141 Sum_probs=105.8
Q ss_pred HhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccc
Q 008096 46 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEAD 125 (577)
Q Consensus 46 ~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (577)
+++|++..|++.+.........+...+.|.++||+ |||+..+..++++.++-+.-- .
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~--------------------- 118 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-S--------------------- 118 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-c---------------------
Confidence 67999999999999999999999999999999999 999999988888877654322 2
Q ss_pred cchhHHHHHHHHHHHhccCCcccchhhhh-hccCCCCCchhhhhhhhhhhHHH-HHHHHHHHHHHHHHHhhcccccc--h
Q 008096 126 TGQLAILYASLLLAALGSGGIRPCVVAFG-ADQFDETDPKQATKTWKYFNWYY-FVMGAAVLVAVTVLVYIQDNVGW--N 201 (577)
Q Consensus 126 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~lg~~i~~~l~~~~gw--~ 201 (577)
.++..++++|++.|++.....++--+.. .|+-..+-+++. .+.-++... ..+.+-++++..++-++.+..+. .
T Consensus 119 -~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~--L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~v 195 (354)
T PF05631_consen 119 -SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW--LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPV 195 (354)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH--HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCc
Confidence 2688899999999999999888877765 443222111111 222232222 12223334444445555555554 7
Q ss_pred hhhHHHHHHHHHHHHHHHHcccc
Q 008096 202 WGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 202 ~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
.+|..+.++..++.+++....++
T Consensus 196 aPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 196 APFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred chHHHHHHHHHHHHHHHHhcccc
Confidence 78888888777776665554443
No 187
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.95 E-value=6.5e-09 Score=113.94 Aligned_cols=167 Identities=16% Similarity=0.088 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH------------HHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLHMPLTKAAN------------TLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~------------i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
..++..+.+|+...++|.+++ +.|++..+.+. ......++..++.+++++++||+ |||++++++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 334456677888888888885 67876543221 12333445566778899999998 99999988887
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+..++..+..+...... +...+....+...++..+..+....+.+|.+|.+. |+++
T Consensus 374 ~~~~~~~~l~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~ 429 (502)
T TIGR00887 374 ILTVLFFVLGFAYNHLS------------------THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTA 429 (502)
T ss_pred HHHHHHHHHHHHHHhcc------------------hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHH
Confidence 77776666654320000 11111111111222223345667788899999988 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccc----------ccchhhhHHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDN----------VGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~----------~gw~~~f~~~~~~~~~~~~~ 217 (577)
.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 430 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 430 HGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988763 34455666666655555443
No 188
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.95 E-value=3.4e-08 Score=103.81 Aligned_cols=137 Identities=15% Similarity=0.229 Sum_probs=102.5
Q ss_pred hhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Q 008096 362 SMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIP 441 (577)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (577)
.....+..+-++.=+.. .++.+|+++-+. +..|+.+.++-++.+...+
T Consensus 410 v~~a~~~~gEI~~~ffs----~klI~kiGHv~v-------~~lgLa~~~~Rf~~~S~L~--------------------- 457 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFS----FKLIEKIGHVNV-------MYLGLACNVGRFLYYSYLQ--------------------- 457 (618)
T ss_pred ehhhhhccchHHHHHHH----HHHHHHhcccce-------eeehhhHHHHHHHHHHHhc---------------------
Confidence 44445555545444443 357777776655 8889998888888888877
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHH-HHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCC
Q 008096 442 ISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFW-TANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNN 520 (577)
Q Consensus 442 ~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~-~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~ 520 (577)
++|.+++.-++.++..+.+..+.-+|+...+|++.|.+++|+.. ...++|-.+|.++.|.+....+.
T Consensus 458 -n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~----------- 525 (618)
T KOG3762|consen 458 -NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA----------- 525 (618)
T ss_pred -CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh-----------
Confidence 88888999999999999999999999999999999999999997 56888889999888887554322
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHhhhh
Q 008096 521 LNKGKLEYFYWLITLLQVVNVIYYFFCA 548 (577)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 548 (577)
...|..+++.+++.++++....
T Consensus 526 ------~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 526 ------RTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhh
Confidence 3346666665555555555443
No 189
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.95 E-value=1.4e-08 Score=110.06 Aligned_cols=177 Identities=15% Similarity=-0.010 Sum_probs=121.4
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHH--------HH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWT--------IT 88 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~--------~~ 88 (577)
+.++.+....++....++.+..++|.|+.+.+|++..+.++..+...++..++.+++|+++||+ ++|+. +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 3456666778888888999999999999999999999999999999999999999999999997 54421 11
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhh
Q 008096 89 VASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 168 (577)
Q Consensus 89 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (577)
.+......+..++.... .. .+....++...+.+.+.++..+.......|..|. .
T Consensus 340 ~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------ 393 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPY-LS------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------ 393 (465)
T ss_pred HHHHHHHHHHHHHHHHH-cC------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------
Confidence 11111111111111111 00 1233334444555555555555555555565553 3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhcccc---cchhhhHHHHHHHHHHHHHHHH
Q 008096 169 TWKYFNWYYFVMGAAVLVAVTVLVYIQDNV---GWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 169 r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
++.+.++.+...++|..++|.+.|++.+.. +|+..|.+.++..+++.++...
T Consensus 394 ~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 899999999999999999999999887643 3888888877776666555443
No 190
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.95 E-value=3.1e-08 Score=105.11 Aligned_cols=164 Identities=12% Similarity=0.075 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF 99 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 99 (577)
+..+...++.....++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +++ .+..+.++..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~~~ 296 (394)
T PRK10213 219 MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVSAL 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHHHH
Confidence 3333344444455566666765555578899999999999999999999999999999995 544 44444444333333
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
.+.... .+.+.+.+..++.|++.+...+..++++.+..|+ + +++..+.++..
T Consensus 297 ~l~~~~---------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 348 (394)
T PRK10213 297 VLTLWG---------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAGSIQVAV 348 (394)
T ss_pred HHHHHh---------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHHHHHHHH
Confidence 332221 1456677788889999999999999999988874 3 34556666777
Q ss_pred HHHHHHHHHHHHHhhcccccchhhhHHHHHHHHH
Q 008096 180 MGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFL 213 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~ 213 (577)
.++|..+|+.++|++.+..|++..++..+...++
T Consensus 349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 7899999999999999989988888777655433
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.92 E-value=3.5e-08 Score=103.56 Aligned_cols=159 Identities=11% Similarity=0.119 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
.......+....++....+.|.|+++++|++..+.+++.....++..++.++.|++.||+ |||+.+..+..+..++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~ 288 (385)
T TIGR00710 210 GYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVL 288 (385)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHH
Confidence 333344455556677777889999999999999999999999999999999999999998 9999999888887777776
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
+.+....+ ......+++..++.|++.+...+...+...|.+| ++ |+++.++++...
T Consensus 289 ~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~ 344 (385)
T TIGR00710 289 LEITAILG-----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTLR 344 (385)
T ss_pred HHHHHHhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHHH
Confidence 66543111 0134445566777889999988999998888876 34 788888877776
Q ss_pred HH-HHHHHHHHHHhhcccccchhhhH
Q 008096 181 GA-AVLVAVTVLVYIQDNVGWNWGLG 205 (577)
Q Consensus 181 ~i-g~~lg~~i~~~l~~~~gw~~~f~ 205 (577)
.. |.+.++ +.+.+.++.+|...+.
T Consensus 345 ~~~g~i~~~-~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 345 LVLGAIVGY-LVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHH-HHHhccccChHHHHHH
Confidence 54 555555 4555555545544433
No 192
>PRK10133 L-fucose transporter; Provisional
Probab=98.92 E-value=2.2e-08 Score=107.79 Aligned_cols=164 Identities=13% Similarity=0.101 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF 99 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l-~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 99 (577)
......++.....++...+++.|+ ++.+|+|+.++++....+.++..++.+++|++.||+ |+|+++..+.++..++..
T Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 262 WAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 334444555566666778888895 667899999999999999999999999999999998 999999888777666555
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
+..+.. +. ..+....+.|++.+...|...+...+.+|++. +.+.++..+
T Consensus 341 ~~~~~~----------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~~- 389 (438)
T PRK10133 341 ISAFAG----------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIVM- 389 (438)
T ss_pred HHHHcC----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHhH-
Confidence 544432 11 22456678899999999999999999887532 334444433
Q ss_pred HHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHH
Q 008096 180 MGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSII 216 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~ 216 (577)
..+|+.++|.+.|.+.+..| -+..|++..++.+...+
T Consensus 390 ~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 390 TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 34678888899999988887 78888776665544333
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.91 E-value=1.6e-08 Score=122.00 Aligned_cols=161 Identities=11% Similarity=0.032 Sum_probs=129.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChH-HHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLT-KAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~-~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
+..+...++.....+....+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++.+.++.++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~ 313 (1146)
T PRK08633 235 WLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSL 313 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHH
Confidence 3333344445555667778899999999999999 999999999999999999999999998 99998888888887777
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
+++.+.. +.+.+++..++.|++.++..+...+++.+.+|++. |++++++.++
T Consensus 314 ~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~ 365 (1146)
T PRK08633 314 FLLPTAP----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNF 365 (1146)
T ss_pred HHHHHhh----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHH
Confidence 7776544 56667788888999999999999999999999888 9999999999
Q ss_pred HHHHHHHHHHHHHHhhcc-cccchhhhHHHHH
Q 008096 179 VMGAAVLVAVTVLVYIQD-NVGWNWGLGIPTV 209 (577)
Q Consensus 179 ~~~ig~~lg~~i~~~l~~-~~gw~~~f~~~~~ 209 (577)
..++|.++++.+++.+.. .+++...|++.+.
T Consensus 366 ~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 366 LQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999888877776643 2344445554443
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.90 E-value=2.3e-08 Score=106.31 Aligned_cols=153 Identities=9% Similarity=-0.004 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 008096 35 GFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPP 114 (577)
Q Consensus 35 ~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 114 (577)
....++|.|+++..+ ++.+.+++.+...++...+..+.+++.||.++.++.+..+.++..++..+++++.
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 345678888877655 7788888888877766665566666666533667777778877777777666554
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 115 CQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
+.+.+.+...+.+++.+...|...+++.|..|+++ |++++++++...++|..+||.++|++
T Consensus 296 -------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 296 -------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHH
Confidence 45556666777888888888999999999999888 99999999999999999999999999
Q ss_pred cccc---c-chhhhHHHHHHHHHHHH
Q 008096 195 QDNV---G-WNWGLGIPTVAMFLSII 216 (577)
Q Consensus 195 ~~~~---g-w~~~f~~~~~~~~~~~~ 216 (577)
.+.. + ....++...+..++..+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 357 FDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 8763 2 23444444444444433
No 195
>PRK09848 glucuronide transporter; Provisional
Probab=98.88 E-value=8.9e-09 Score=111.14 Aligned_cols=162 Identities=12% Similarity=0.129 Sum_probs=124.2
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.+.......++....++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..++
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCG 307 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 344445556666666677777778888888998877666666555677788999999999998 9999999999888888
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh-hhhhhhhhhHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWY 176 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~ 176 (577)
.+.+.+.. ..+.+.+++..++.|+|.+...+...++.+|..|.++.+. ++.++..++.+
T Consensus 308 ~~~~~~~~--------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~ 367 (448)
T PRK09848 308 YLLFFWVS--------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLF 367 (448)
T ss_pred HHHHHHcC--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHH
Confidence 77666532 1245666777888999999999999999999988654322 22258888999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccc
Q 008096 177 YFVMGAAVLVAVTVLVYIQDNVGW 200 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~~~gw 200 (577)
+....+|..+|+.+.+.+.+..||
T Consensus 368 ~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 368 SFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999998887655555
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.88 E-value=2e-08 Score=121.06 Aligned_cols=182 Identities=9% Similarity=-0.016 Sum_probs=131.6
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.++..+...++..+..+++..++|.|+++.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 304 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLF 304 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHH
Confidence 444455555666666778888999999999999999999999999999999999999999987 7777666666665555
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCccc-ccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCK-EADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 176 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (577)
.+.+++.. ... ..+.-+- .... .....+.+.+++..++.|++.+...+...+++.+.+|++. |+++++.+
T Consensus 305 ~~~l~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~ 375 (1140)
T PRK06814 305 GLDLAFAS-SSV-PAEPAQL-KSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAAN 375 (1140)
T ss_pred HHHHHhcc-ccc-ccccccc-cchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHH
Confidence 55444420 000 0000000 0000 0001245667788888999999999999999999999988 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc-cccchhhhHHHHH
Q 008096 177 YFVMGAAVLVAVTVLVYIQD-NVGWNWGLGIPTV 209 (577)
Q Consensus 177 ~~~~~ig~~lg~~i~~~l~~-~~gw~~~f~~~~~ 209 (577)
+....+|..+++++.+.+.. ..++...+++.++
T Consensus 376 ~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 376 NVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999999999999888863 3455655554444
No 197
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.86 E-value=7.8e-08 Score=102.86 Aligned_cols=184 Identities=14% Similarity=0.089 Sum_probs=126.6
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.|++....++..-++.++..++|.|+++.+ +............+...+..+++|+++||+ |++|++.++.+...++.
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHH
Confidence 455555666665566667778999998866 344444445556788899999999999998 99999998888777766
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCc---------------
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDP--------------- 163 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~--------------- 163 (577)
....... |. ....+.+.+.+..+...++.|.-+.+...++.+.||+++.
T Consensus 331 ~~~~l~l--p~--------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 331 ALLFLTL--PG--------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred HHHHHHh--cc--------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence 5443322 21 0113566666766666777777778888888888874111
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHHc
Q 008096 164 KQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 164 ~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 221 (577)
+.+++-+...|+......+|+.+-|.+.|...+..| +...|+...+..++...+.+..
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 011235678888888889999999988887766554 7778887777665555554433
No 198
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.86 E-value=8.8e-08 Score=101.61 Aligned_cols=160 Identities=11% Similarity=0.004 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 008096 30 KLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQ 109 (577)
Q Consensus 30 ~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (577)
..........++.|+++.+|.|..+.+++.+...++..+++++.+++.||+ ++++.+..+.+ ..+..+.+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh----
Confidence 344455566778889999999999999999999999999999999999998 98888877753 333333334332
Q ss_pred CCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 008096 110 LRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVT 189 (577)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 189 (577)
+.+...+..++.|++.+...+...+.+.+..|++. +++++.++.+...++|..++..
T Consensus 292 ------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 292 ------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred ------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHH
Confidence 45556677778899999988888888887544321 1688899999999999999998
Q ss_pred HHHhhcccccchhhhHHHHHHHHHHHHHHH
Q 008096 190 VLVYIQDNVGWNWGLGIPTVAMFLSIIAFV 219 (577)
Q Consensus 190 i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 219 (577)
+.+.+ +..|-+..+++.....++.+....
T Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 349 LYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 88866 467777777776665555444433
No 199
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.84 E-value=1.3e-07 Score=95.39 Aligned_cols=173 Identities=14% Similarity=0.062 Sum_probs=135.4
Q ss_pred CCCccee--hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHH
Q 008096 13 KGGIITM--PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVA 90 (577)
Q Consensus 13 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (577)
++-||+- |.+..-....++.+|..+.++|.++. +.|+|..++|+..+..++......+..-.+++|...+|+..+..
T Consensus 202 ~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~ 280 (395)
T COG2807 202 RKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA 280 (395)
T ss_pred cccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 4456654 55555566688999999999999997 66999999999999999999999999999999887889999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
+..+.+|.+.+.+.. ....+...+++|+|.|+.+|.+.+++.+..++.+ + -+
T Consensus 281 ~~~~l~G~~G~~~~P-----------------------~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~--~---Aa 332 (395)
T COG2807 281 LLLMLVGLVGLLLAP-----------------------GQLPILWALLLGLGQGGAFPLALTLILLRSSDAA--I---AA 332 (395)
T ss_pred HHHHHHHHHHHHHhh-----------------------hhHHHHHHHHHhCccchHHHHHHHHHHhhcCChH--H---HH
Confidence 999999999998764 1123333588999999999999999999877543 1 34
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHH
Q 008096 171 KYFNWYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLS 214 (577)
Q Consensus 171 ~~~~~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~ 214 (577)
+..+.-+....+=+.+||++.|++.|..| |+.+....+...++.
T Consensus 333 ~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 333 ALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 44555555566667889999999988764 887766555544433
No 200
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.84 E-value=2.6e-08 Score=103.84 Aligned_cols=144 Identities=14% Similarity=0.065 Sum_probs=111.3
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh-HhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~-~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.+.+....++..+.++....+++.|+++ +|++..+.+.+..... +...++.+++|+++||+ |||+.+..++++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 4555556666788888899999999987 9999999998888766 56788999999999998 9999999888887776
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
..+..+..+..+. ......+.+.+....++.+++.+...+...+++.|.+|+++ |++.+++++
T Consensus 289 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 351 (356)
T TIGR00901 289 NAGFVWLASNGHH-----------DGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLS 351 (356)
T ss_pred HHHHHHHHhcCcc-----------cccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHH
Confidence 6655543211000 00000145667777888999999999999999999999998 999999987
Q ss_pred HHHH
Q 008096 178 FVMG 181 (577)
Q Consensus 178 ~~~~ 181 (577)
...+
T Consensus 352 ~~~~ 355 (356)
T TIGR00901 352 SLSA 355 (356)
T ss_pred HHHh
Confidence 7654
No 201
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.82 E-value=1.1e-07 Score=99.89 Aligned_cols=166 Identities=11% Similarity=-0.047 Sum_probs=113.2
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccch---hHHHHH-HHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGR---FWTITV-ASI 92 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Gr---k~~~~~-~~~ 92 (577)
+..+.+....++....+|++..++|.|+++ .|+|.. .+.......+.+.++ .++++||. .| |+.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 445666678888999999999999999964 678865 566655555555544 47777775 43 333332 333
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
+.++.....++.. +....++...+.+++.....+...++.+|.+|++. |+++
T Consensus 266 ~~a~~~~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~ 317 (368)
T TIGR00903 266 LIAAFFLALAFEL----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKA 317 (368)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcc
Confidence 3333333333222 12223444556677777777888899999999988 9999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHH
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAF 218 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 218 (577)
.|+.+...++|+..+|.+.+.+.. |-...|.+.++..+++.+..
T Consensus 318 ~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 318 AGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887763 55566766666555555544
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.82 E-value=6.1e-08 Score=103.99 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=135.6
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
|....+++..++..+......+..+.|.+..+|.+ ...+.+.....+...++.++.++++||+ |+|+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 45666677888888888888888888888888877 5778888899999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCch-hhhhhhhhhhH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNW 175 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~ 175 (577)
+.++..+.. +.+.+.+++..++.|++.+...+...++++|..+.++.+ .++..+..++.
T Consensus 303 ~~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~ 362 (428)
T PF13347_consen 303 GFLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSV 362 (428)
T ss_pred HHHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHh
Confidence 988888764 126788999999999999999999999999999865433 12335788899
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccch
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWN 201 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~ 201 (577)
+.....+|..+++.+.+.+.+..|+.
T Consensus 363 ~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 363 NSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999999988776555443
No 203
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=4.4e-08 Score=106.57 Aligned_cols=176 Identities=14% Similarity=0.146 Sum_probs=151.1
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccc--hhHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAG--RFWTITVASIIY 94 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~G--rk~~~~~~~~~~ 94 (577)
+.++.+.....+..++++....+++.|.. .++++..+++.++++..+...++.++.|+++|+. . ++....++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 44555555777788888888899999987 8999999999999999999999999999999997 6 445567777777
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhh
Q 008096 95 QIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 174 (577)
Q Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (577)
.++...+++.. +++.++..-++.|++.|...+.....+.|+.+.++ ...++|
T Consensus 376 gl~~~~~p~~~----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~G 427 (509)
T KOG2504|consen 376 GLARLFLPFAT----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYG 427 (509)
T ss_pred HHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHH
Confidence 77777777766 67788888889999999998888889999999888 889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccc-chhhhHHHHHHHHHHHHHHHHcc
Q 008096 175 WYYFVMGAAVLVAVTVLVYIQDNVG-WNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 175 ~~~~~~~ig~~lg~~i~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
+......++.++||.+.|++.+..| |...|+...+..+++..++++..
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999988887 99999999988888777666554
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.76 E-value=3.7e-08 Score=101.79 Aligned_cols=141 Identities=17% Similarity=0.247 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 22 IFANEVCEKLAVVGFHANMISYLTTQLHMP-LTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s-~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
++...++..+.++....++|.|+.+.+|++ ..+.+.+.+...+...++.++.|+++||+ |+|+...+......++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 444555566677788999999999999999 89999999999999999999999999998 9888887777777766666
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 180 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (577)
+.+... ..+....++..++.|++.+...+...+++.|.+|+++ |+++.++++...
T Consensus 290 ~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 344 (352)
T PF07690_consen 290 LLLLPF-------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIG 344 (352)
T ss_dssp HCCSHH-------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHH
T ss_pred HHHHHH-------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHH
Confidence 655431 1245556667888999999999999999999999887 999999999999
Q ss_pred HHHHHHHH
Q 008096 181 GAAVLVAV 188 (577)
Q Consensus 181 ~ig~~lg~ 188 (577)
++|..+||
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999987
No 205
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=1.4e-07 Score=94.88 Aligned_cols=175 Identities=11% Similarity=0.077 Sum_probs=119.8
Q ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------C--CChHHHHHHHHHHhHhhhhchhhhhh
Q 008096 15 GIITMPFIFANEVCEKLAVVGFHANMISYLTTQL-----------------H--MPLTKAANTLTNFGGTGSLTPLIGAF 75 (577)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l-----------------g--~s~~~~~~i~~~~~~~~~~~~~~~G~ 75 (577)
.+|..+++....+.+.+++|+.+-+.....+... + .+...--.=....++....+.++.++
T Consensus 324 lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ 403 (528)
T KOG0253|consen 324 LRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGV 403 (528)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHH
Confidence 3456677788999999999999887655554321 1 11111112233456778889999999
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhh
Q 008096 76 VADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGA 155 (577)
Q Consensus 76 laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 155 (577)
+.||+ |||+++..+.+++.+..+++.... ..+. ....++.+|+.. .+.+.+++.|..
T Consensus 404 iverl-GRKkTMal~l~~f~iflfll~~c~-----------------~rn~-~tvllf~arafi----sg~fqvaYvYtP 460 (528)
T KOG0253|consen 404 IVERL-GRKKTMALSLILFGIFLFLLTTCK-----------------TRNA-YTVLLFTARAFI----SGAFQVAYVYTP 460 (528)
T ss_pred HHHHh-cchhHHHHHHHHHHHHHHHHHHhc-----------------Ccch-hHHHHHHHHHHH----hchheEEEEecC
Confidence 99997 999999999999888777776543 1111 112233445443 344568899999
Q ss_pred ccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 156 DQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 156 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
|.||... |+.+.|.......+|+++.|.++ ...+ -+-..+..+...+.+++.++..+
T Consensus 461 EVyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 461 EVYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred cccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHhee
Confidence 9999988 99999999999999999999888 3333 33444555666666555555443
No 206
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.70 E-value=5.2e-07 Score=94.65 Aligned_cols=143 Identities=11% Similarity=-0.071 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 008096 24 ANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTL 103 (577)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 103 (577)
...++.....+....+.|.++.+.+|++..+.+++.+...++..++.++.|++.||+ |||+.+..+..+..+..+....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 279 (377)
T PRK11102 201 LASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVV 279 (377)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455566666778888888999999999999999999999999999999998 9999998888765544333322
Q ss_pred hhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH-HHH
Q 008096 104 SAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MGA 182 (577)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~i 182 (577)
....+ .+.+.+.++..+.+.+.+...+.....+.|..| ++ ++++.++.+.. ..+
T Consensus 280 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~~~ 334 (377)
T PRK11102 280 SALLD------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRFGI 334 (377)
T ss_pred HHHHh------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHHHH
Confidence 21011 133444444445555555556666677777666 44 67777775544 356
Q ss_pred HHHHHHHHHH
Q 008096 183 AVLVAVTVLV 192 (577)
Q Consensus 183 g~~lg~~i~~ 192 (577)
|..+++.+++
T Consensus 335 g~~~g~~~~~ 344 (377)
T PRK11102 335 GAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHh
Confidence 6667665543
No 207
>TIGR00898 2A0119 cation transport protein.
Probab=98.69 E-value=7.5e-08 Score=105.48 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=102.7
Q ss_pred HhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccc
Q 008096 46 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEAD 125 (577)
Q Consensus 46 ~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (577)
+.++.+.... .....+...++.++.+++.||+ |||+.+.++.++..++.+++.+.. .
T Consensus 351 ~~~~~~~~~~---~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~---~---------------- 407 (505)
T TIGR00898 351 GNLGGNIYLD---LFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP---V---------------- 407 (505)
T ss_pred cccCCChHHH---HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC---C----------------
Confidence 3455554333 3344566677888999999998 999999999888888777666543 1
Q ss_pred cchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhH
Q 008096 126 TGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLG 205 (577)
Q Consensus 126 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~ 205 (577)
...+...+..++.+++.+...+...++.+|.+|++. |+.++++.+....+|.+++|.+.+ +. ..++..+++
T Consensus 408 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~ 478 (505)
T TIGR00898 408 -DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLV 478 (505)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHH
Confidence 112334444555666666777888899999999877 999999999999999999999988 43 456666777
Q ss_pred HHHHHHHHHHHHHHH
Q 008096 206 IPTVAMFLSIIAFVF 220 (577)
Q Consensus 206 ~~~~~~~~~~~~~~~ 220 (577)
+.++..+++.++..+
T Consensus 479 ~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 479 LFGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHHHHc
Confidence 766666555444443
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.68 E-value=6e-07 Score=95.14 Aligned_cols=179 Identities=11% Similarity=0.036 Sum_probs=132.0
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
++..+...+....+.-....+.+.|+++.-|.+....+.+.+...+.-.+.-...+++-.|+ |-|+++.++++..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33444455555666666678888899755448888888888888888888889999999998 99999999999988877
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
.+.+..++ |. +..+....++-.++|+..|....+...++.+..|++. |+++.++++.
T Consensus 288 ~l~a~~~~-~~----------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~ 344 (400)
T PF03825_consen 288 LLYAYFSD-PW----------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSA 344 (400)
T ss_pred HHHHHhcC-Cc----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHH
Confidence 77776520 00 0011223344567999999999999999999999988 8999999877
Q ss_pred H-HHHHHHHHHHHHHhhcccccchh------hhHHHHHHHHHHHHHHHHc
Q 008096 179 V-MGAAVLVAVTVLVYIQDNVGWNW------GLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 179 ~-~~ig~~lg~~i~~~l~~~~gw~~------~f~~~~~~~~~~~~~~~~~ 221 (577)
. ..+|..+|..++|++.+.+|-+. .+.+.+...++..+++.+.
T Consensus 345 ~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 345 LSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 5 58999999999999998876443 3344444444444444443
No 209
>PRK11043 putative transporter; Provisional
Probab=98.67 E-value=1e-06 Score=93.46 Aligned_cols=146 Identities=13% Similarity=0.069 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008096 27 VCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAI 106 (577)
Q Consensus 27 ~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~ 106 (577)
.+....++....++|.|++ ++|++..+.++......++..++.++.+++.||+ |+|+.+....+...++.+.+.+...
T Consensus 213 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred HHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455666677888875 5899999999988888888899999999999998 9999877666665555444333221
Q ss_pred cCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHH
Q 008096 107 LPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLV 186 (577)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 186 (577)
.+ ..+.+.+++...+.+++.+...|...+...|..| ++ ++++.++++.....+...
T Consensus 291 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~~~~~ 346 (401)
T PRK11043 291 LS-----------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLGLCFL 346 (401)
T ss_pred hc-----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHHHHHH
Confidence 11 1134445566677888888888988888877776 35 788999998888888888
Q ss_pred HHHHHHhhcccc
Q 008096 187 AVTVLVYIQDNV 198 (577)
Q Consensus 187 g~~i~~~l~~~~ 198 (577)
++.+.+.+.+..
T Consensus 347 ~~~~~g~l~~~~ 358 (401)
T PRK11043 347 ASLLVSALISTP 358 (401)
T ss_pred HHHHHHHccCCC
Confidence 888888887643
No 210
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.67 E-value=7.6e-07 Score=94.16 Aligned_cols=143 Identities=11% Similarity=0.057 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008096 33 VVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRP 112 (577)
Q Consensus 33 ~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 112 (577)
......+.|.|+++++|++..+.+.+.....++..++.++.|++.||+ |||+.+.++.++..++.+.+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~------- 290 (392)
T PRK10473 219 ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP------- 290 (392)
T ss_pred HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 344455667788889999999999999999999999999999999998 999999999988888877777654
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 113 PPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
+....+....+.+.|.+...+. .+..+..|.++ + .+.+.++ ..++..+|+.+++
T Consensus 291 ---------------~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~--~---~g~~~~~----~~~~~~~g~~~~~ 344 (392)
T PRK10473 291 ---------------SHAVSLFGITLICAGFSVGFGV--AMSQALGPFSL--R---AGVASST----LGIAQVCGSSLWI 344 (392)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcc--c---ccHHHHH----HHHHHHHHHHHHH
Confidence 2222333333333333332222 22333445433 1 1333333 4456666666666
Q ss_pred hhcccccchhhhHHHHH
Q 008096 193 YIQDNVGWNWGLGIPTV 209 (577)
Q Consensus 193 ~l~~~~gw~~~f~~~~~ 209 (577)
++.+..|+.....+.+.
T Consensus 345 ~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 345 WLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHhccchhHHHHHH
Confidence 77666666544433333
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.66 E-value=1.2e-07 Score=103.25 Aligned_cols=165 Identities=14% Similarity=0.073 Sum_probs=120.3
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
|.++.+++..++.+...+....+.+.|.+..++ +....+++.+...++..++.++.++++||+ |+|+++.++.++..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556666667777777777666666655544444 666777777777788899999999999998 999999988887776
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCch-hhhhhhhhhhH
Q 008096 97 GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNW 175 (577)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~ 175 (577)
+.+...+....+ +.+.+.+++.-++.|++.+...+...++++|..+.++.+ .++..+..++.
T Consensus 309 ~~~~~~~~~~~~-----------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 309 SCGVLLLMGLAA-----------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHhccC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 665554321001 124556667777889999999999999999998754321 12224668888
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccc
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGW 200 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw 200 (577)
..+...+|..+|+.+.|++.+..|+
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999988765555
No 212
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1.9e-08 Score=104.21 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=121.0
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHII 439 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (577)
.+.++....+.-+++.|+.++ +++|..|+.. +.+|..++.++.+.-++..
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gy----LadryNR~~v-------~~vG~~iW~~Av~~~~fs~------------------- 119 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGY----LADRYNRKRV-------IAVGIFIWTLAVFASGFSN------------------- 119 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHH----HHhhcCcceE-------EeeHHHHHHHHHHHHHHHH-------------------
Confidence 456666777777889999888 7777655544 8999999999988888776
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCC
Q 008096 440 IPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDN 519 (577)
Q Consensus 440 ~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~ 519 (577)
++|.+.+.-.+.|+||..+.|..+.++.|++|+..|++..++++++..+|..+|......+.+..
T Consensus 120 ---~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~------------ 184 (493)
T KOG1330|consen 120 ---HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT------------ 184 (493)
T ss_pred ---HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc------------
Confidence 78888888899999999999999999999999999999999999999999888877765553332
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhhhhhccccccccc
Q 008096 520 NLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFKPIQM 558 (577)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 558 (577)
.++.|.|...++++++.++..+++.++..++..++
T Consensus 185 ----~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 185 ----FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred ----cceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 22566688889999999888888877655444443
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=98.61 E-value=2.9e-07 Score=99.27 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 008096 21 FIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFS 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 100 (577)
.++...++...+........+.|.+..++ +.+..+.+.....+...++.++.++++||+ |+|+.+.++.++..++.+.
T Consensus 233 ~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~ 310 (444)
T PRK09669 233 IMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSAL 310 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHH
Confidence 33334444444443333333333333333 344445566666677788889999999998 9999999887766554433
Q ss_pred HHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh-hhhhhhhhhHHHHH
Q 008096 101 LTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWYYFV 179 (577)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~ 179 (577)
..+.. +.+.+.+++..++.|++.+...+...++++|..+.+|.+. ++..+..++.++..
T Consensus 311 ~~~~~--------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~ 370 (444)
T PRK09669 311 IFFIP--------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFA 370 (444)
T ss_pred HHHhC--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHH
Confidence 33221 1256667777888999999999999999999987544222 22246778889999
Q ss_pred HHHHHHHHHHHHHhhcccccch
Q 008096 180 MGAAVLVAVTVLVYIQDNVGWN 201 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~gw~ 201 (577)
..+|..+|+.++|++.+..|+.
T Consensus 371 ~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 371 IKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999887766663
No 214
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1e-06 Score=94.12 Aligned_cols=194 Identities=11% Similarity=0.075 Sum_probs=134.1
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASI 92 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (577)
+.+++....++.+.++..+.---...+....+-++-|++..++.++....+....++.+.+.++.||+ |||+.++.+..
T Consensus 265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~ 343 (485)
T KOG0569|consen 265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLS 343 (485)
T ss_pred cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHH
Confidence 45555556666666666665544444445555567899999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHH--HhccCCcccchhhhhhccCCCCCchhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLA--ALGSGGIRPCVVAFGADQFDETDPKQATKTW 170 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (577)
++.+..+++.....+.. .......+..+++.++. .++.| ..|..+-+.+|++|++. |.
T Consensus 344 ~~~~~~~~~~~~~~l~~-------------~~~~~~~y~~i~~~~~~~~~f~~G-~gpi~~fi~aELf~~~~------R~ 403 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSN-------------SFGSWLSYLCIAAIFLFIISFAIG-PGPIPWFIGAELFPQSA------RS 403 (485)
T ss_pred HHHHHHHHHHHHHHHHH-------------HhhhHHHHHHHHHHHHHHHhhhcC-CCchhHHHHHHhCCccc------hH
Confidence 99888887776542211 00000111223333333 33333 35788888999999988 99
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccccccc
Q 008096 171 KYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLYRNL 228 (577)
Q Consensus 171 ~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 228 (577)
.+.++-+....+..++-......+.+.+|= +.|++..+...+..+..++..|+++.+
T Consensus 404 aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 404 AAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 999988777777777666666667666664 456666666666666666666665443
No 215
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.59 E-value=3.3e-05 Score=82.00 Aligned_cols=104 Identities=10% Similarity=0.145 Sum_probs=79.7
Q ss_pred HHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHH
Q 008096 58 TLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLL 137 (577)
Q Consensus 58 i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (577)
-..+-.....+.+++++.+.|+. |.|..+.++...+..-.+..-+- |-+.++.+-.
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-----------------------N~y~~yfssa 110 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-----------------------NSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-----------------------chHHHHHHHH
Confidence 36667777888899999999997 99999999988777665555542 5677899999
Q ss_pred HHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 138 LAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 138 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
+.|+|.+..+..--.++++...++. +++..++.-.....+.++|.++.
T Consensus 111 llG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 9999999999999999999888766 55555554444455555554443
No 216
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.57 E-value=9.3e-07 Score=77.89 Aligned_cols=132 Identities=19% Similarity=0.245 Sum_probs=91.5
Q ss_pred hHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhH
Q 008096 367 TMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLW 446 (577)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (577)
..+..++..+..++ +.||.++|+. +..+..+..++.+...... +.+.
T Consensus 7 ~~~~~~~~~~~~g~----~~d~~g~~~~-------~~~~~~~~~~~~~~~~~~~----------------------~~~~ 53 (141)
T TIGR00880 7 YALGQLIYSPLSGL----LTDRFGRKPV-------LLVGLFIFVLSTAMFALSS----------------------NITV 53 (141)
T ss_pred ehhHHHHHHhhHHH----HHhhcchhHH-------HHHHHHHHHHHHHHHHHhc----------------------cHHH
Confidence 34445556666555 5556554432 5666666666655544333 4455
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchh
Q 008096 447 LVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKL 526 (577)
Q Consensus 447 l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~ 526 (577)
.....++.+++.+...+..+.++.|..|++.|+++.++.++...+|..+++.+.+.+.+.. ++
T Consensus 54 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------------~~ 116 (141)
T TIGR00880 54 LIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-----------------GW 116 (141)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-----------------ch
Confidence 5666788889988889999999999999999999999999999999999999988864321 22
Q ss_pred hHHHHHHHHHHHHHHHHHhhhh
Q 008096 527 EYFYWLITLLQVVNVIYYFFCA 548 (577)
Q Consensus 527 ~~~~~~~~~~~~~~~i~~~~~~ 548 (577)
.+.|+..+...++..+..++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 117 RAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC
Confidence 4456666666666655555543
No 217
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.56 E-value=3.2e-06 Score=83.05 Aligned_cols=162 Identities=10% Similarity=0.099 Sum_probs=117.0
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
+.....+++.+|+|.+|...+..+..++..+ .++.|.+.|++ |.+.++.+|.+...+|..++.++- ...
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~--~~~------- 90 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAV--SGR------- 90 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHH--hCc-------
Confidence 4457788999999999999999999999986 58999999998 999999999999999988887764 111
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN 197 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~ 197 (577)
....++|.+.+..++.+.+.+....++.....+.||+ + ||++.++.-....+++.+-..+...+.++
T Consensus 91 ------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 91 ------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred ------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 1123677788888888888887777777777788984 5 89999997777666655544444333333
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 198 VGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 198 ~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
-.-...+.++....++.++...+.++
T Consensus 158 ~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 158 DPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhheec
Confidence 22333444444445555555555544
No 218
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.52 E-value=7.9e-07 Score=92.76 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=102.4
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+....++.....+.+..+++.|+++.+|++..+++++.....+...++.+++|+++||+ |||+.+..+......+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 33444445555556677888999999999999999999999999999999999999999998 99988887777666666
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 178 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (577)
.++.+.. . +..+...+.....+.+++.|...+...+++++.+| ++ ++.+.|+.+.
T Consensus 306 ~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~~~~ 360 (366)
T TIGR00886 306 FLVVLGL--V----------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGLVGA 360 (366)
T ss_pred HHHHhcC--C----------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHHHHH
Confidence 6555432 0 00034444555555666666666777788888877 34 8888998877
Q ss_pred HHHHH
Q 008096 179 VMGAA 183 (577)
Q Consensus 179 ~~~ig 183 (577)
..++|
T Consensus 361 ~~~~g 365 (366)
T TIGR00886 361 IGNLG 365 (366)
T ss_pred hccCC
Confidence 77665
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.48 E-value=4.8e-06 Score=88.09 Aligned_cols=141 Identities=8% Similarity=-0.042 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 008096 34 VGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPP 113 (577)
Q Consensus 34 ~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 113 (577)
.......+.|+++.+|++..+.+++......+..++.++.+++.||+ +++.... .....++.+.........
T Consensus 224 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~----- 295 (394)
T PRK11652 224 AVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQS--VICCLLAGLLMWIPGWFG----- 295 (394)
T ss_pred HHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHhc-----
Confidence 33345567788888999999999998888888888999999999998 7433332 222222222211111000
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 008096 114 PCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVY 193 (577)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~ 193 (577)
..+.+.+.+..++.++|.+...|...++..|.+|+ + ++...++.+...++|..+++.+++.
T Consensus 296 ------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~ 356 (394)
T PRK11652 296 ------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAM 356 (394)
T ss_pred ------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01345567778889999999999999999998873 4 7788899998999999999999988
Q ss_pred hcccccch
Q 008096 194 IQDNVGWN 201 (577)
Q Consensus 194 l~~~~gw~ 201 (577)
+.+...+.
T Consensus 357 ~~~~~~~~ 364 (394)
T PRK11652 357 LPQTGQFS 364 (394)
T ss_pred ccCCchHH
Confidence 87654443
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.47 E-value=1.9e-06 Score=90.43 Aligned_cols=178 Identities=11% Similarity=0.096 Sum_probs=137.1
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLH---MPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg---~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
|.++.+..........++..-.-.+.|.+..++ .++...|.+.+...+.-.++-.+..++.+|+ |.|+.++++..+
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHH
Confidence 344444443344444455555557788876553 4566788899999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
+.+=.+++++++ +.+.+.+...+.++-.+....++.-|+++.+|++. ..+.+
T Consensus 299 ~~iRi~~~~~~~----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y 350 (412)
T PF01306_consen 299 MAIRIIGSGFAT----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLY 350 (412)
T ss_dssp HHHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHH
T ss_pred HHHHHHHHhhhc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHH
Confidence 999889999877 78889999999999999999999999999999765 55666
Q ss_pred hH-HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 174 NW-YYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 174 ~~-~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
.+ ++.+.++|..+.+.++|.+.|++|++.+|++.+.+.++..++.++..+
T Consensus 351 ~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 351 LVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 66 467779999999999999999999999998777766555555444443
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.42 E-value=2.1e-06 Score=92.37 Aligned_cols=175 Identities=13% Similarity=0.068 Sum_probs=119.4
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccc-------hhHHH-HH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAG-------RFWTI-TV 89 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~G-------rk~~~-~~ 89 (577)
.++.+....+++++.++.++.++|.|+.+.+|++..+.|++.++-.+...+..+++|.++||... +||.+ .+
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i 338 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTI 338 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhH
Confidence 35667779999999999999999999999999999999999999999999999999999999733 22222 22
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccc--hhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhh
Q 008096 90 ASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTG--QLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 167 (577)
Q Consensus 90 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (577)
+....++..+.+++.. . ++. ....+.++..+.|+..++ ...-..|..|.+
T Consensus 339 ~~~~~ai~l~~l~~~~---~---------------~~~~~a~~~l~~~~~~~g~~~~G----f~~~~~~~apq~------ 390 (466)
T KOG2532|consen 339 AFGGPAVFLLVLAFTS---D---------------EHRLLAVILLTIAIGLSGFNISG----FYKNHQDIAPQH------ 390 (466)
T ss_pred HHHHHHHHHHeeeecC---C---------------CcchHHHHHHHHHHHHcccchhh----hHhhhhhccchH------
Confidence 3322333333333322 1 011 112222222222333222 222223323432
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhhccc---ccchhhhHHHHHHHHHHHHHHHHc
Q 008096 168 KTWKYFNWYYFVMGAAVLVAVTVLVYIQDN---VGWNWGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 168 ~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~---~gw~~~f~~~~~~~~~~~~~~~~~ 221 (577)
-+..+++.+...++..+++|.+.+.+..+ ..|+..|++.++..+++-+.+.+.
T Consensus 391 -a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 -AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 57889999999999999999999998843 369999999998887776554443
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.6e-06 Score=90.28 Aligned_cols=161 Identities=17% Similarity=0.199 Sum_probs=128.6
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
....+...++...++....+.+..|.+..+|.++.+..+.......+..++.++..++++|+ |+|+++.++.++.+++.
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHH
Confidence 33444467777777777777778888888899999998998888888888899999999998 99999999999999999
Q ss_pred HHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh-hhhhhhhhhHHH
Q 008096 99 FSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWYY 177 (577)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~ 177 (577)
++..+.. .++...+++..++.++|.+...+...++++|..+-+|.+. ++.-|..++...
T Consensus 317 ~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~t 376 (467)
T COG2211 317 LLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMT 376 (467)
T ss_pred HHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHH
Confidence 9988865 2378888899999999999999999999999987654332 222356677777
Q ss_pred HHHHHHHHHHHHHHHhhcccccc
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGW 200 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw 200 (577)
...=+|..+|..+.|++....|+
T Consensus 377 F~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 377 FFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 77778888888777776554443
No 223
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.39 E-value=2.7e-06 Score=92.57 Aligned_cols=187 Identities=9% Similarity=0.021 Sum_probs=130.1
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHH----HHHHHHHHhHhhhhchhhhh----hhhhhccchhHH--H
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTK----AANTLTNFGGTGSLTPLIGA----FVADTYAGRFWT--I 87 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~----~~~i~~~~~~~~~~~~~~~G----~laDr~~Grk~~--~ 87 (577)
.+..+++...+....+.-..+.++.|.+++.+.+... .+++.+.-.+...+.+++.. ++.||..+.+.. +
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 3444455555666666666777888887765544222 56777777777777776655 445541122333 4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhh
Q 008096 88 TVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 167 (577)
Q Consensus 88 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (577)
.+|+++..++.+.++++..... .....+.+.++...++.++|+....|...+++.+..|++.
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~----- 414 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFAD-------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL----- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH-----
Confidence 7788888888877776421100 0012378889999999999999999999999999999887
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 168 KTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 168 ~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
|++++++++....+|..+++.+........+|...|...++.+++..+++++..|
T Consensus 415 -~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 -MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887766667877776666655555555444444
No 224
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.38 E-value=5.5e-06 Score=88.38 Aligned_cols=158 Identities=11% Similarity=0.004 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQL-HMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSL 101 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~l-g~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 101 (577)
....++......+..++++.|+++.. +.+....+...+.+.....++.+++|+++||+ ++|+.+.++.++..+..++.
T Consensus 238 ~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~ 316 (410)
T TIGR00885 238 VIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGS 316 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHH
Confidence 33444444444467788999987532 55666666677777788899999999999998 99999988888777776666
Q ss_pred HHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHH
Q 008096 102 TLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 181 (577)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (577)
.+.. +. ......++.|++.+.++|...++..+..+++. +.. .+...++ .
T Consensus 317 ~~~~----------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~-s~~l~~~-~ 365 (410)
T TIGR00885 317 IFAG----------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYG-AAGLVMA-I 365 (410)
T ss_pred HHcC----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhh-HHHHHHH-H
Confidence 6543 22 23466677788888888999999999888643 222 2222333 3
Q ss_pred HHHHHHHHHHHhhcccc------cchhhhHHHHHHHH
Q 008096 182 AAVLVAVTVLVYIQDNV------GWNWGLGIPTVAMF 212 (577)
Q Consensus 182 ig~~lg~~i~~~l~~~~------gw~~~f~~~~~~~~ 212 (577)
+|+.+.|.+.|++.|.. +.+..|+++.++.+
T Consensus 366 ~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 366 IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 99999999999999853 47778877666544
No 225
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.34 E-value=1e-05 Score=80.37 Aligned_cols=153 Identities=19% Similarity=0.241 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 008096 31 LAVVGFHANMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILP 108 (577)
Q Consensus 31 ~~~~~~~~~l~~~l~~~lg~s~--~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 108 (577)
.........++.+.. +++.+. .+.+++.+.+.+...++.++.|.++||+ |||+.+..+.....++.+.+++..+
T Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-- 91 (338)
T COG0477 16 LDLGLLSPALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-- 91 (338)
T ss_pred HhcchHHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--
Confidence 333333344444444 444444 5889999999999999999999999998 9998888888766666666666541
Q ss_pred CCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCC-CCchhhhhhhhhhhHHHH-HHHHHHHH
Q 008096 109 QLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWYYF-VMGAAVLV 186 (577)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~l 186 (577)
...+.+++.|+.+|++.+...+...+++.|.+|+ ++ |+...+.... ...+|..+
T Consensus 92 ------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 147 (338)
T COG0477 92 ------------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLAL 147 (338)
T ss_pred ------------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHH
Confidence 2578888999999999999999999999999997 33 7888888777 57788888
Q ss_pred HHHHHHhhccc--ccchhhhHHHHHHH
Q 008096 187 AVTVLVYIQDN--VGWNWGLGIPTVAM 211 (577)
Q Consensus 187 g~~i~~~l~~~--~gw~~~f~~~~~~~ 211 (577)
++.+++.+... .+|+..|.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 148 GPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 88777666543 57888555555443
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.28 E-value=4.3e-06 Score=85.37 Aligned_cols=144 Identities=17% Similarity=0.224 Sum_probs=115.3
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHII 439 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (577)
.+.+...-++.-++..|+++. +.+|++.|-+ |.+|+..+.++.++.++..
T Consensus 108 iG~LFaskA~~qllvnp~~G~----l~~~iGy~ip-------m~~Gl~vmf~sTilFafg~------------------- 157 (464)
T KOG3764|consen 108 IGLLFASKALVQLLVNPFFGN----LIDRIGYKIP-------MVAGLFVMFLSTILFAFGN------------------- 157 (464)
T ss_pred hhHHHHHHHHHHHHhcccchh----hHHHhccccH-------HHHHHHHHHHHHHHHHHcc-------------------
Confidence 344444555555666666554 6667766655 9999999999999999887
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCccc-HHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCC
Q 008096 440 IPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESM-RSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPD 518 (577)
Q Consensus 440 ~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~-rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~ 518 (577)
++..++++-.+.|+|..+......+++++.+|++. ||+++|+....-++|-.++|.+.|.+++.. |....
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~------Gk~aP 228 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA------GKSAP 228 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc------CCcCc
Confidence 77788999999999999999999999999999765 799999999999999999999999998876 22223
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 008096 519 NNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTF 553 (577)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 553 (577)
|++++.+.++-...-++..+.++.
T Consensus 229 -----------FlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 229 -----------FLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred -----------HHHHHHHHHHHHHHHHheeCcccc
Confidence 889888888888777776554333
No 227
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.27 E-value=0.00038 Score=72.89 Aligned_cols=155 Identities=16% Similarity=0.142 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC------C-----------------ChHHHHHHHHHHhHhhhhchhhhhhhhhh
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLH------M-----------------PLTKAANTLTNFGGTGSLTPLIGAFVADT 79 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg------~-----------------s~~~~~~i~~~~~~~~~~~~~~~G~laDr 79 (577)
.+..+|+++.|..+.+-.-.-+.++.+ . ..-..+.+..+-.+-..+.-+..-++.+|
T Consensus 6 w~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~~ 85 (402)
T PF02487_consen 6 WLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFIHR 85 (402)
T ss_pred HHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhhhh
Confidence 446678888877666665444442111 0 11123445555666777777888889998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCC
Q 008096 80 YAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFD 159 (577)
Q Consensus 80 ~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 159 (577)
. ..+.-+.+..++..+|.++.+++. +.+.-+++..+.+++.|.......++.+ .++
T Consensus 86 v-~y~~Ri~~~~~l~~~g~l~va~~~----------------------~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 86 V-PYWIRILICVALSAAGMLLVAFSP----------------------SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred c-cchHHHHHHHHHHHHHHhheeecc----------------------chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 6 655555666667788888888765 6777889999999999998888888755 566
Q ss_pred CCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccc--hhhhHHHHHHHH
Q 008096 160 ETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGW--NWGLGIPTVAMF 212 (577)
Q Consensus 160 ~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw--~~~f~~~~~~~~ 212 (577)
+.. .+.+..+...++++|+..-..+.. .|+ |..+.+..++-+
T Consensus 142 ~~~----------l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~ 185 (402)
T PF02487_consen 142 KSS----------LSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPA 185 (402)
T ss_pred ccc----------cccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHH
Confidence 422 555666677777777766555554 444 556655554433
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.25 E-value=2.4e-05 Score=83.55 Aligned_cols=165 Identities=18% Similarity=0.044 Sum_probs=107.3
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
++......++....++.....+|.++++.+|++..+.++.......+..++..+.+++.++. ++++.+.....+..++.
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig~ 298 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVGL 298 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHH
Confidence 34444445556666677778889999999999999999998888888888888888876554 44454443333444444
Q ss_pred HHHHHhhh-cCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHH
Q 008096 99 FSLTLSAI-LPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 177 (577)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (577)
.++.+... .++ ++...+++.++.++|.+...|+..+..- .+.+. .++++.++++
T Consensus 299 ~l~~~~~~~~~~------------------~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~-----~~G~a~a~~~ 353 (413)
T PRK15403 299 ALLIVGNLLWPH------------------VWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNL-----PKGTVSASLN 353 (413)
T ss_pred HHHHHHHHHccc------------------cHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCC-----CCcHHHHHHH
Confidence 44433210 011 3334567888889999888888875332 22221 1567777777
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhhhHHHHHH
Q 008096 178 FVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVA 210 (577)
Q Consensus 178 ~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~ 210 (577)
.....+..+++...+++... +-.++|....++
T Consensus 354 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 354 MVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 77777888888888888654 555566554443
No 229
>PRK11462 putative transporter; Provisional
Probab=98.18 E-value=2.6e-05 Score=84.48 Aligned_cols=156 Identities=12% Similarity=0.045 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLT 102 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 102 (577)
+...++..+...........|.+..+| +....+.+...+.++..++.+++++++||+ |+|+++..+..+..+..++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~ 311 (460)
T PRK11462 234 GLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMF 311 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444443444 344556777788888889999999999998 998887755554444333333
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh-hhhhhhhhhHHHHHHH
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWYYFVMG 181 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~ 181 (577)
+.. . .+...+++..++.|++.+...+...++++|..+.+|.+. ++..+..++.......
T Consensus 312 ~~~---~-----------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~K 371 (460)
T PRK11462 312 FVP---M-----------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLK 371 (460)
T ss_pred Hhc---h-----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHH
Confidence 221 1 122234445566788877777777888888776443222 1113455677777889
Q ss_pred HHHHHHHHHHHhhcccccc
Q 008096 182 AAVLVAVTVLVYIQDNVGW 200 (577)
Q Consensus 182 ig~~lg~~i~~~l~~~~gw 200 (577)
+|..+|+.+.|++.+..|+
T Consensus 372 lg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 372 LGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999888877654454
No 230
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.11 E-value=0.00049 Score=72.07 Aligned_cols=155 Identities=10% Similarity=0.027 Sum_probs=108.1
Q ss_pred HHHHHHHHHh-cCCChHHHH-HHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 008096 38 ANMISYLTTQ-LHMPLTKAA-NTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPC 115 (577)
Q Consensus 38 ~~l~~~l~~~-lg~s~~~~~-~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (577)
+++..|+.+. .|++..|.. -+.-...-.+....++...+.|.. |.|++++++.+...+...++.+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 6678899887 999999987 344444445666778889999987 999999999988888888877765
Q ss_pred CCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc
Q 008096 116 QGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ 195 (577)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~ 195 (577)
+...+.+.-+..|++.+. ..+..+++=...|+++ -.++.+....+.-+|-.++.+++-.+.
T Consensus 93 ------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 93 ------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred ------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667788888888887665 3555566655555544 445566666666666666665554443
Q ss_pred c--cccchhhhHHHHHHHHHHHHHHHHcc
Q 008096 196 D--NVGWNWGLGIPTVAMFLSIIAFVFGY 222 (577)
Q Consensus 196 ~--~~gw~~~f~~~~~~~~~~~~~~~~~~ 222 (577)
. ..+++...++......+++++.++.+
T Consensus 154 s~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 154 SFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3 34566666777776666666555443
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.08 E-value=0.00011 Score=76.21 Aligned_cols=155 Identities=13% Similarity=0.159 Sum_probs=127.1
Q ss_pred HHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCc
Q 008096 41 ISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQV 120 (577)
Q Consensus 41 ~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 120 (577)
=+|--+.||+|..|..-+......+..++-...|++..|..+.+++..+++....++..+..++...
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~------------- 298 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL------------- 298 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 3444446899999999999999999999999999998865588999999999999998888877622
Q ss_pred ccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc---
Q 008096 121 CKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN--- 197 (577)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~--- 197 (577)
++.+.+..+.++.|+|.|.+.....+...|+.++++ -+.++|....+..++..+|..++|.+.|.
T Consensus 299 ------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~ 366 (403)
T PF03209_consen 299 ------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGLGTFLGGALRDLVRA 366 (403)
T ss_pred ------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 257889999999999999999999999999998877 78999999999999999988888765431
Q ss_pred -------ccchhhhHHHHHHHHHHHHHHHH
Q 008096 198 -------VGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 198 -------~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
.+|...|.+-++.++++++++..
T Consensus 367 ~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~ 396 (403)
T PF03209_consen 367 LFGNSPALAYGVVFALEAVLLLAALVLLGR 396 (403)
T ss_pred hccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777777776666655443
No 232
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.07 E-value=3.2e-05 Score=84.69 Aligned_cols=178 Identities=13% Similarity=0.014 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCCCh------HHHHHHHHHHhHhhhhchhhh----hhhhhhccchhHHHHHHHHH
Q 008096 26 EVCEKLAVVGFHANMISYLTTQ--LHMPL------TKAANTLTNFGGTGSLTPLIG----AFVADTYAGRFWTITVASII 93 (577)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~~--lg~s~------~~~~~i~~~~~~~~~~~~~~~----G~laDr~~Grk~~~~~~~~~ 93 (577)
.+.....+|.+..-++.++..+ .+.+. ...+++.+.-.+...+..++. +++.||+ +..+.+.+|+++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 3355556666666666665531 11111 124555555555555665665 6667775 677889999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
.+++.+.++++..... .....+.+.++...+++++|+++..|...+++.+..|++. |++++
T Consensus 360 ~~l~f~~l~~~~~~~~-------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~ 420 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN-------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIM 420 (500)
T ss_pred HHHHHHHHHHHHHhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHH
Confidence 9999988887653221 0012346678889999999999999999999999999887 99999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcc----------cccchhhhHHHHHHHHHHHHHHHHccc
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQD----------NVGWNWGLGIPTVAMFLSIIAFVFGYP 223 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~----------~~gw~~~f~~~~~~~~~~~~~~~~~~~ 223 (577)
|.+..+..+|..++..+...... ..++...|...++..++..++++...+
T Consensus 421 g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888877777777666543221 113556665555554433333344333
No 233
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.07 E-value=1.7e-05 Score=86.62 Aligned_cols=149 Identities=11% Similarity=0.062 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCh----HHHHHHHHHHhHhhhhchhhhhhhhhhccchhH-------HHHHHHHHH
Q 008096 26 EVCEKLAVVGFHANMISYLTTQLHMPL----TKAANTLTNFGGTGSLTPLIGAFVADTYAGRFW-------TITVASIIY 94 (577)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~l~~~lg~s~----~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~-------~~~~~~~~~ 94 (577)
..+....+......++.|.++..+.+. -..+++.+...+...+..++.|++.||+ ++|+ -+.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 444555555565778888875433211 0234454555566667888889999998 8886 377788887
Q ss_pred HHHHHHHHHhhh-cCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 95 QIGMFSLTLSAI-LPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 95 ~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
.++.+.++.... ... .....+.+.+....+++|+|+++..|...+++.+..|++. ++.++
T Consensus 357 ~~~~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~ 417 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD-------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFIL 417 (489)
T ss_pred HHHHHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHH
Confidence 777665432210 000 0011245667788889999999999999999999999877 89999
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 008096 174 NWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l 194 (577)
++++...++|..+|..+....
T Consensus 418 g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 418 GMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998777655
No 234
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.06 E-value=1.8e-05 Score=82.30 Aligned_cols=167 Identities=14% Similarity=0.111 Sum_probs=126.0
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhc---cchhHH-HHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTY---AGRFWT-ITVASI 92 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~-~~~~~~ 92 (577)
+.+..+..+.+...+.+-.=..++++|++ .+|.+.+-.+.+.....+.+.+.+++.|..+||. +||||. +..+.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 45555555666677777677788899986 8899999999999999999999999999999984 376665 555666
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhh
Q 008096 93 IYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 172 (577)
Q Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 172 (577)
..+++.+++.++..+...+. + +......+-....++++..+.=++.-..+..+-++++|+..++++++ | +
T Consensus 111 ~i~~~l~Lig~aaDig~~lg---d--~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~---~--A 180 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLG---D--NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT---R--A 180 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhc---C--CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh---c--c
Confidence 67788888888765544221 1 22222333466778888888888888888999999999997665222 3 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l 194 (577)
.+.+.....+|+.+|..++++.
T Consensus 181 ns~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 181 NSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred chhHHHHHHhcceeeeeccccc
Confidence 8889899999999998877744
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.04 E-value=0.00011 Score=79.40 Aligned_cols=204 Identities=11% Similarity=-0.043 Sum_probs=145.5
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCh------HH----HHHHHHHHhHhhhhchhhhhhhhhhcc
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQ-LHMPL------TK----AANTLTNFGGTGSLTPLIGAFVADTYA 81 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-lg~s~------~~----~~~i~~~~~~~~~~~~~~~G~laDr~~ 81 (577)
|.-++.++.+..++++.+++++.+..+...|+.++ ++-++ .+ ..+....+.+...+.+++.-++.+|+
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 66678888988999999999999999999999754 44322 11 23455555556567777788889998
Q ss_pred c-hhHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCCCCCCCcc-cccccchhHHHHHHHHHHHhccCCcccchhhhhhccC
Q 008096 82 G-RFWTITVASIIYQIGMFSLTLSAILPQ-LRPPPCQGDQVC-KEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQF 158 (577)
Q Consensus 82 G-rk~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 158 (577)
| ||++..++.++.+++.....+..++++ .++ +++... ........+..++...+.|+..+.....-.+++++..
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~ 409 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY---YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRS 409 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc---ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHc
Confidence 8 477778898888888888877653221 000 000000 0001112466777788899999999999999999999
Q ss_pred CCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccccc--chhhhHHHHHHHHHHHHHHHHcccc
Q 008096 159 DETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVG--WNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 159 ~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
+++. ++.|..+|+++.+..+.+++..+..|.+.+.+| -.+++.+.++.++++.++..+..|+
T Consensus 410 ~~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 410 SNLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred cccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 8532 126899999999999999999988887655554 4567788888888887777766665
No 236
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.00022 Score=69.12 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=69.8
Q ss_pred HHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccc
Q 008096 43 YLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCK 122 (577)
Q Consensus 43 ~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (577)
|+-.++|+-..|++.+........+++..+.|-++|+- |||+..+.-++. .+++.+..
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycit----YiLsCiTK----------------- 119 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCIT----YILSCITK----------------- 119 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHH----HHHHHHhh-----------------
Confidence 45557788899999988888888889999999999997 999976655443 34444443
Q ss_pred ccccchhHHHHHHHHHHHhccCCcccchhhh-hhccCC
Q 008096 123 EADTGQLAILYASLLLAALGSGGIRPCVVAF-GADQFD 159 (577)
Q Consensus 123 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~ 159 (577)
.++.+..++++|.+-|+.....+++--+. ++|...
T Consensus 120 --hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 120 --HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred --cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 23467789999999999988877766554 455553
No 237
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.01 E-value=8.4e-06 Score=88.53 Aligned_cols=145 Identities=9% Similarity=-0.119 Sum_probs=112.2
Q ss_pred HHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccc
Q 008096 45 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEA 124 (577)
Q Consensus 45 ~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (577)
++.+|+|+.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++..++.+...+...-..+ ..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~------------~~ 346 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNL------------AF 346 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccc------------cc
Confidence 356899999999999999999999999999999998 99999999998888876554321100000 00
Q ss_pred ccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccccc-----
Q 008096 125 DTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVG----- 199 (577)
Q Consensus 125 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~g----- 199 (577)
...+.+.+...-++.+++.+........++.+..|++. ++..++++....++|..+++.+++++.+..|
T Consensus 347 gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~ 420 (468)
T TIGR00788 347 GISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDN 420 (468)
T ss_pred CCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 00123344555677888888888899999999999988 8999999999999999999999999988776
Q ss_pred chhhhHHHH
Q 008096 200 WNWGLGIPT 208 (577)
Q Consensus 200 w~~~f~~~~ 208 (577)
++..+....
T Consensus 421 ~~~~~~~i~ 429 (468)
T TIGR00788 421 SNNLWLLIL 429 (468)
T ss_pred ccchHHHHH
Confidence 554444333
No 238
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.98 E-value=4.2e-05 Score=86.11 Aligned_cols=137 Identities=14% Similarity=0.103 Sum_probs=95.4
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-------------H
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQ-------------A 426 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~-------------~ 426 (577)
.+.+.+...++..+..+++++ +++|.+||+. +.+|+++++++.++.++..-..+. .
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~----~~~r~~r~~~-------i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSY----FGTKLHRPIV-------IGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHH----hhcccCcceE-------EEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 456666677777777777665 6677665544 788888888888776543200000 0
Q ss_pred HHhcCCCCCC------------Cccc----cchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHh
Q 008096 427 ALAHGLVDKP------------HIII----PISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANS 490 (577)
Q Consensus 427 ~~~~~~~~~~------------~~~~----~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~ 490 (577)
...+.+|+.. .+.. ...+..+++.-++.|+|.+...+....++.|.+|++.|+.+.|+.+....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0011223100 0000 12345566788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 008096 491 IGNYVSTLLVTLVHKFS 507 (577)
Q Consensus 491 lg~~l~~~i~~~v~~~~ 507 (577)
+|..+|+.+.+.+.+..
T Consensus 219 iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQIY 235 (633)
T ss_pred hhhHHHHHHHHHHHhcc
Confidence 99999999999887644
No 239
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.93 E-value=0.0018 Score=68.86 Aligned_cols=187 Identities=9% Similarity=-0.076 Sum_probs=107.5
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
.+.+....++.++.--+...-.+.|+.+-+.-+.--.+.....-.+...++.+..|...||. -|.+++..+.+..-++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 45556666666666666666677888877655666666666667778888899999999998 99999888776654433
Q ss_pred HHHHHh----hhcCCCCCCCCCCCCcccccccchhHHHHHH-HHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 99 FSLTLS----AILPQLRPPPCQGDQVCKEADTGQLAILYAS-LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 99 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
...+.. -..+. . ...+......+++. .++..+..=.......+.=-|+...=..+++..+.+..
T Consensus 83 ~~s~~~~~~l~~~~~---~--------~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~N 151 (432)
T PF06963_consen 83 AASCALFLLLLSYPS---S--------SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMN 151 (432)
T ss_pred HHHHHHHHHHHhCCc---c--------ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHH
Confidence 332221 10110 0 00001112222222 22222222222222333334444321111122255555
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHH
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIA 217 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 217 (577)
+...---.+--++||++.|.+....|...+.++.+...++++.+
T Consensus 152 A~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 152 ATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 55544456689999999999988888887777777776666665
No 240
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.92 E-value=0.00026 Score=75.35 Aligned_cols=101 Identities=16% Similarity=0.072 Sum_probs=82.4
Q ss_pred HHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHH
Q 008096 369 VSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLV 448 (577)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 448 (577)
.+-.+.....++ +.||++-|+. +.++++...+..++.++.. +...+.
T Consensus 73 ysYal~qIp~Gl----LaDrlG~K~v-------L~l~~l~Wsl~t~L~~fa~----------------------Sl~~L~ 119 (511)
T TIGR00806 73 YSHLAVLVPVFL----LTDYLRYKPV-------LVLQALSFVCVWLLLLLGT----------------------SVWHMQ 119 (511)
T ss_pred HHHHHHHHHHHH----HHHHhCchHH-------HHHHHHHHHHHHHHHHHHH----------------------HHHHHH
Confidence 333444444444 6666654443 7888888888888877765 677888
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008096 449 PQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLV 503 (577)
Q Consensus 449 ~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v 503 (577)
+.-+++|++++... ..+.++.+.+|++.|++++|+++.+..+|.++++.+.+.+
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999 9999999999999999999999999999999999998884
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00015 Score=74.71 Aligned_cols=139 Identities=14% Similarity=0.102 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 008096 35 GFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPP 114 (577)
Q Consensus 35 ~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 114 (577)
.+-.+++.|+.+..|++..+++...+.+..+.+++..++-++-.|+ ...|.+.+..++..+-.+..+++.
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~--------- 323 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIG--------- 323 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 3447889999988999999999999999999999999999999998 888887777655544444444443
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 115 CQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
+ ..-+.+.++.|+..+..+|...+...+-.|++. ...+..-...-.|+.+-|.+.|++
T Consensus 324 -------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 324 -------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGLLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred -------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccceeeeeheecchHHHHHHHHH
Confidence 2 334456678899999999999999999999433 112222223457889999999999
Q ss_pred cccccchhhhH
Q 008096 195 QDNVGWNWGLG 205 (577)
Q Consensus 195 ~~~~gw~~~f~ 205 (577)
.|..|-...+.
T Consensus 382 ~d~~g~~~~~~ 392 (422)
T COG0738 382 ADMFGIQLTFL 392 (422)
T ss_pred HHhhhhHHHHH
Confidence 99988776665
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.90 E-value=7.4e-05 Score=59.39 Aligned_cols=67 Identities=19% Similarity=0.117 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 25 NEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
..++...+...+.++++.|++ +.|+|..|+|.+.++..+...+++++.|.++||+ ++++.+.....+
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 455555666678899999997 6999999999999999999999999999999999 888877665543
No 243
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.89 E-value=1.7e-07 Score=101.10 Aligned_cols=187 Identities=14% Similarity=0.088 Sum_probs=115.7
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
+.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||+.++.+.++.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccc
Confidence 4444445555555555444555555566667777776 3333344566667778888999998 999999999988887
Q ss_pred HHHHHH-HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhH
Q 008096 97 GMFSLT-LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 175 (577)
Q Consensus 97 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (577)
+.+.++ .....+. .+ ...+...+............+..+....+.+|.+|.+. |+++.++
T Consensus 329 ~~~~~~~~~~~~~~--~~-----------~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~ 389 (451)
T PF00083_consen 329 CSLILGIIFFLGVS--SS-----------SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGL 389 (451)
T ss_pred cccccccccccccc--cc-----------cccccccceeeeeccccccccccccccccccccccccc------ccccccc
Confidence 776665 1110010 00 00012111111111112222445777788999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHccccc
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPLY 225 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (577)
.+....++.++++.+...+.+..+-...+.+.+..+++..+..+...|++
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET 439 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPET 439 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeC
Confidence 99988999999988888887776623445555555555555555555543
No 244
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.87 E-value=0.0033 Score=64.18 Aligned_cols=156 Identities=15% Similarity=0.089 Sum_probs=93.2
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhh--chhhhhhhhh-----hccchhH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSL--TPLIGAFVAD-----TYAGRFW 85 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~--~~~~~G~laD-----r~~Grk~ 85 (577)
|+-++++.++++.......- +|....+|..++ .-|.|-++.+... +.+.. .-+++..+.| |+ ||||
T Consensus 27 ~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS----~ay~P~sLKllWaPiVDs~y~k~~-Grrk 99 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFS----FAYWPFSLKLLWAPIVDSVYSKRF-GRRK 99 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhh----hhhhHHHHHHHHHhhhHHHHHHhh-cccc
Confidence 55567777877777776654 566666666665 5677777665432 22222 2356677777 87 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchh
Q 008096 86 TITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQ 165 (577)
Q Consensus 86 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 165 (577)
.-++=+ -+.+|.++..++-..+... .+... .++...+....++.-+..+.-=.+.....-.+..+++
T Consensus 100 sWvvp~-q~llG~~mllLs~~v~~~~--------g~ng~-~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~--- 166 (510)
T KOG3574|consen 100 SWVVPC-QYLLGLFMLLLSYLVDRGL--------GGNGG-LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN--- 166 (510)
T ss_pred ceeeeh-HHHHHHHHHHHhhCCCccc--------ccCCC-CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh---
Confidence 644322 1234445555554222211 11111 2234444445566666666655666777777777777
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 166 ATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 166 ~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
.+.+......+.+.|.+++..+.
T Consensus 167 ---lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 ---LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred ---cCchhHHHHHHHhhhHHhhccee
Confidence 77888888888888888887654
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.80 E-value=0.00012 Score=79.46 Aligned_cols=133 Identities=12% Similarity=0.116 Sum_probs=85.2
Q ss_pred hHHHHHHHHHhhhhhhhhccccc-cCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhh
Q 008096 367 TMVSMLSTIALYDRIIIPVARKF-TGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVL 445 (577)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (577)
......++.++.++ +.||+ ++|+. +.+|.++.+++.+++.... .+..
T Consensus 54 ~~~~~~l~~ligG~----LaDRilGrrr~-------iliG~il~~lg~lll~~~~---------------------~~~~ 101 (493)
T PRK15462 54 YCSLVYVTPILGGF----LADKVLGNRMA-------VMLGALLMAIGHVVLGASE---------------------IHPS 101 (493)
T ss_pred HHHHHHHHHHHHHH----HHHHccCcHHH-------HHHHHHHHHHHHHHHHHhh---------------------cchh
Confidence 33444555555555 56665 44433 7788888877765544221 1112
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcccCcc--cHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCc
Q 008096 446 WLVPQYSLHGIAEAFMSVGHLEFLYDQAPES--MRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNK 523 (577)
Q Consensus 446 ~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~--~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~ 523 (577)
.+.....+..+|.+...+....++.|..|++ .|.++.+++.+..++|+.++|.+.+.+.+..
T Consensus 102 ~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~---------------- 165 (493)
T PRK15462 102 FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY---------------- 165 (493)
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------
Confidence 2333344455666777777788999999975 7999999999999999999999999875432
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhh
Q 008096 524 GKLEYFYWLITLLQVVNVIYYFFCA 548 (577)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~i~~~~~~ 548 (577)
++.+.|...++..+++++.+++..
T Consensus 166 -Gw~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 166 -SWAMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHhh
Confidence 234456665555555555555433
No 246
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.80 E-value=5e-05 Score=77.35 Aligned_cols=112 Identities=15% Similarity=0.097 Sum_probs=86.9
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHII 439 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (577)
.+.+++..++.=.+..|. ++.+.||.|||+. +.+|.+..++++++.+...
T Consensus 70 aGflGSsF~ilQ~~sS~~----~G~~SD~yGRkpv-------ll~c~~~va~s~ll~~~S~------------------- 119 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPL----WGCLSDRYGRKPV-------LLACLIGVALSYLLWALSR------------------- 119 (451)
T ss_pred hhhHhhHHHHHHHHhhhh----hhhhhhhhCchHH-------HHHHHHHHHHHHHHHHHHH-------------------
Confidence 445555566655666666 4457777777765 8889998888888877665
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 008096 440 IPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHK 505 (577)
Q Consensus 440 ~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~ 505 (577)
++..++..-++.|+..+-.+ ..-+++.|.++++.|+.+++...++.++|..+||.+.+++..
T Consensus 120 ---~F~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 ---NFAAFVLARFLGGIFKGNLS-VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ---HHHHHHHHHHhhhhccCchH-HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 66555665777888765444 456789999999999999999999999999999999998765
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.77 E-value=6.2e-05 Score=79.83 Aligned_cols=172 Identities=9% Similarity=-0.028 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLT 102 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 102 (577)
+...++.....-.+.++|--++ ++++-...-.|.....--.+-.+.-++.+++..|+ |+-+++.+++....+=.+...
T Consensus 377 f~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S 454 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYS 454 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHH
Confidence 3444444455445555664455 46665555555444444455566778889999998 999999999988887777777
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH-HH
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MG 181 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~ 181 (577)
... |.|..+-.-+++|+..+..+.+..+|++...|++- |..+-++.... -.
T Consensus 455 ~L~----------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 455 YLQ----------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHG 506 (618)
T ss_pred Hhc----------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcc
Confidence 665 78888889999999999999999999999999987 67777775444 48
Q ss_pred HHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHcccc
Q 008096 182 AAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 182 ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
+|-.+|.+|+|.+.+++|-+..|...++.+++.++..+.+.+.
T Consensus 507 lG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred cCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 8999999999999999999999999998888777766655544
No 248
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.71 E-value=0.011 Score=63.75 Aligned_cols=164 Identities=7% Similarity=-0.017 Sum_probs=100.3
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----ChHHHHHHHHHHhHhhhhc-hhhhhhhhhhccchhHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHM-----PLTKAANTLTNFGGTGSLT-PLIGAFVADTYAGRFWTITVA 90 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~-----s~~~~~~i~~~~~~~~~~~-~~~~G~laDr~~Grk~~~~~~ 90 (577)
+.++......+|-.+.++.+.+ +.|.+.. ......++-+...+...+. .++-+++++|+ +|++.+-+.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~ 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTV 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHH
Confidence 4445555566666666654443 4555555 3356777777666655554 78899999998 999998877
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccc--c-cc---------hhHHHHHHHHHHHhccCCccc-chhhhhhcc
Q 008096 91 SIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEA--D-TG---------QLAILYASLLLAALGSGGIRP-CVVAFGADQ 157 (577)
Q Consensus 91 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~---------~~~~~~~~~~l~g~g~g~~~~-~~~~~~~~~ 157 (577)
...+..-..++++.- .|. .+..|++..|+.. . +. +.|...+.-+...+-.....+ .-+++.+|.
T Consensus 81 ~~~F~~~f~lF~~vl-~p~--~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi 157 (472)
T TIGR00769 81 ISPFLGFFALFAFVI-YPL--SDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHH-hcc--hhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777776666666553 221 1222333222111 0 00 111111222222222223333 678899999
Q ss_pred CCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc
Q 008096 158 FDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ 195 (577)
Q Consensus 158 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~ 195 (577)
+..+| -.+.+++++.+.|+|.++++.+..++.
T Consensus 158 ~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 158 TTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99877 667899999999999999998888776
No 249
>PTZ00207 hypothetical protein; Provisional
Probab=97.70 E-value=0.0004 Score=76.81 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=85.3
Q ss_pred hhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHH
Q 008096 382 IIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFM 461 (577)
Q Consensus 382 ~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~ 461 (577)
.+++.||++.|+. +.+|.++..+++++.++... + ....+.+.+.+..++.|++.+..
T Consensus 81 ~G~L~Dr~G~R~v-------llig~ll~~iG~ll~ala~~---------~-------~i~~s~~~l~l~r~l~G~G~~~~ 137 (591)
T PTZ00207 81 YSFIYDYLGPRPI-------FVLSMTVFCLGTLLFALTFQ---------E-------VIEGSVVRLSVYNGLMTLGCMLF 137 (591)
T ss_pred HHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHHHhc---------c-------cccCcHHHHHHHHHHHHHHHHHH
Confidence 3456677665443 88899999998887766420 0 00125666677778899999888
Q ss_pred hhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 008096 462 SVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNV 541 (577)
Q Consensus 462 ~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (577)
.+.....+.+.+| +.||.+.|+..+...+|+.+.+.+...+.. .++..+++..++..++..
T Consensus 138 ~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~------------------~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 138 DLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS------------------DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HhHHHHHHHHHHHHHHHH
Confidence 8888888888887 679999999999999999865544443211 112445666666666655
Q ss_pred HHHhhhhh
Q 008096 542 IYYFFCAK 549 (577)
Q Consensus 542 i~~~~~~~ 549 (577)
++.+.+.+
T Consensus 199 ll~~~~vr 206 (591)
T PTZ00207 199 ILAIVFMR 206 (591)
T ss_pred HHHHhhee
Confidence 55555543
No 250
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.66 E-value=0.00087 Score=73.87 Aligned_cols=150 Identities=8% Similarity=-0.012 Sum_probs=110.7
Q ss_pred cceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChH---HHHHHHHHHhHhhhhchhhhhhhhhhccchhH-HHHHHH
Q 008096 16 IITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADTYAGRFW-TITVAS 91 (577)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~---~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~-~~~~~~ 91 (577)
+|.+...+.+.++..+.+|....+.|.....-++-|.. +.++......++..++.++.|.+..+. +|-| .++++.
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~~~ 387 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIFGS 387 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHHHH
Confidence 46677767788888888999988989888877766553 577888888888889999999999876 5544 456776
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhh
Q 008096 92 IIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 171 (577)
Q Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 171 (577)
+++.++...++... ++|....+...++.|+|.|...........-..|+++ .+.
T Consensus 388 ~~~ta~~Gama~~~--------------------~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~------ig~ 441 (599)
T PF06609_consen 388 VLMTAFCGAMAAVR--------------------PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED------IGT 441 (599)
T ss_pred HHHHHHHHHHHHcc--------------------CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH------HHH
Confidence 66665545554332 1233345566778899998887777777777778776 888
Q ss_pred hhhHHHHHHHHHHHHHHHHHH
Q 008096 172 YFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 172 ~~~~~~~~~~ig~~lg~~i~~ 192 (577)
+.++......+|+.+|..+..
T Consensus 442 a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 442 ATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHHH
Confidence 888888888888888877643
No 251
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.66 E-value=0.00018 Score=77.88 Aligned_cols=163 Identities=16% Similarity=0.140 Sum_probs=104.9
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhh----ccchhHHHHHHHHHH
Q 008096 19 MPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADT----YAGRFWTITVASIIY 94 (577)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr----~~Grk~~~~~~~~~~ 94 (577)
++...+..++....-|++..++|.|+++-.|+|..+++.+...+.+++.++.++.|+++|| . .+|..+...+.++
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLCLY 353 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHH
Confidence 4555667888888889999999999998677999999999999999999999999999999 5 6666666665554
Q ss_pred HH-HHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 95 QI-GMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 95 ~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
.+ +.+.+.... .......+.+....+.....++...-..+...++. + |-...
T Consensus 354 ~~~g~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~--k---~~~~~ 406 (495)
T KOG2533|consen 354 AIIGAISLLAAA----------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT--K---ALTTV 406 (495)
T ss_pred HHHHHHHHHhhc----------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH--H---hHHHH
Confidence 43 323333322 12223333333444455555666666666665433 1 33334
Q ss_pred hHHHHHHHHHHHH-HHHHHHhhcccccchhhhHHHHH
Q 008096 174 NWYYFVMGAAVLV-AVTVLVYIQDNVGWNWGLGIPTV 209 (577)
Q Consensus 174 ~~~~~~~~ig~~l-g~~i~~~l~~~~gw~~~f~~~~~ 209 (577)
+.+..+.+.+++. +++.-+.....++|...|+....
T Consensus 407 ~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 407 SAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred hhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 4444444444433 33334455556788888844433
No 252
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.0005 Score=75.65 Aligned_cols=195 Identities=14% Similarity=0.121 Sum_probs=108.7
Q ss_pred CCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 14 GGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
..++..........+.++.-+-...+....+-+..|.+... .+......+...++..++.++.||+ |||+.++.+...
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 34555555555666655554444444444444566666443 4455555566667777779999998 999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
+.++.++++........... ...............++..+. .+..|....+.+|.+|.+- |+++.
T Consensus 369 m~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~f~-~g~g~v~w~~~sEifp~~~------r~~~~ 433 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPN--------SSKGAGWLAIVFLCLFIFSFA-IGWGPVPWVIVSEIFPLRL------RSKGA 433 (513)
T ss_pred HHHHHHHHHHHHHHhccCCC--------cccchhHHHHHHHHHHHHHHh-cccccchhhhhhccCcHhH------HhhhH
Confidence 99999988876522210000 000011122222223333333 3334666678899999877 77777
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHH-HHHHccccc
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSII-AFVFGYPLY 225 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~-~~~~~~~~~ 225 (577)
++-.....+...+-......+.+..++...|........+..+ ..++..|+.
T Consensus 434 s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 434 SLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 7754444443333222222333333334556555555555555 445555543
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.41 E-value=0.00052 Score=75.60 Aligned_cols=128 Identities=9% Similarity=0.167 Sum_probs=96.7
Q ss_pred hhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccc
Q 008096 363 MSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPI 442 (577)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (577)
..++..++.+++..+ .+++.||+|||+. +..++++..++-++.++..
T Consensus 123 ~~s~~~~G~~vG~~i----~g~lsD~~GRk~~-------~~~~~~~~~i~~~~~a~a~---------------------- 169 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLI----FGPLSDRFGRKPV-------LLVSLLLFIIFGILTAFAP---------------------- 169 (521)
T ss_pred HHHHHHHHHHHHHhh----heehHhhcccHHH-------HHHHHHHHHHHHHHHHHhC----------------------
Confidence 344455555555555 4557777766654 7788888777776666665
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCC
Q 008096 443 SVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLN 522 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~ 522 (577)
++....+.-++.|++........+.++.|..+++.|+.+..+ ......++.+++.+.+++..
T Consensus 170 ~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~----------------- 231 (521)
T KOG0255|consen 170 NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR----------------- 231 (521)
T ss_pred cHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-----------------
Confidence 788888888999999999999999999999999999999999 88888888888888777532
Q ss_pred cchhhHHHHHHHHHHHHHHHH
Q 008096 523 KGKLEYFYWLITLLQVVNVIY 543 (577)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~i~ 543 (577)
++.+.++...+..++.+++
T Consensus 232 --~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 232 --DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred --hHHHHHHHHHHHHHHHHHH
Confidence 3456677766666666555
No 254
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.38 E-value=0.0012 Score=69.04 Aligned_cols=182 Identities=15% Similarity=0.030 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 008096 20 PFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMF 99 (577)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 99 (577)
..+..+.......+|++.+.+-.-+ ..-|++...+|++.....++++++..+.|.++||....|.+..+......++..
T Consensus 269 ~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 269 IILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3334444555555555555553333 345788889999999999999999999999999986666666666666555532
Q ss_pred HHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHH
Q 008096 100 SLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 179 (577)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (577)
.....+. .....++++..-.+.|.+..+..|...-+..|..-+.. -+...|+.+..
T Consensus 348 ~l~~~t~------------------~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsGll~~~ 403 (480)
T KOG2563|consen 348 MLLTCTL------------------FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSGLLNLS 403 (480)
T ss_pred HHHHhhc------------------cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------CcccceeEEee
Confidence 2221111 11245567777778888888899998888888764433 23446666555
Q ss_pred HHHHHHHHHHHHHhhccccc----chhhhHHHHHHHHHHHHHHHHcccccc
Q 008096 180 MGAAVLVAVTVLVYIQDNVG----WNWGLGIPTVAMFLSIIAFVFGYPLYR 226 (577)
Q Consensus 180 ~~ig~~lg~~i~~~l~~~~g----w~~~f~~~~~~~~~~~~~~~~~~~~~~ 226 (577)
.++-.++=.++.+...+..+ |...-+.....+++..++..+.+++++
T Consensus 404 gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 404 GQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred hhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 66655555566677777665 443445555555556666566565543
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.00037 Score=72.81 Aligned_cols=173 Identities=14% Similarity=0.069 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH--------HHHHH-hHhhhhchhhhhhhhhhccchhHHHHHHHHH
Q 008096 23 FANEVCEKLAVVGFHANMISYLTTQLHMPLTKAAN--------TLTNF-GGTGSLTPLIGAFVADTYAGRFWTITVASII 93 (577)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~--------i~~~~-~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (577)
....|...+++|+.-.+...-++ ..|+.+++... ...+. ......+..++.++.|+. |||+..+.|.++
T Consensus 310 ~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq~~GF~~ 387 (538)
T KOG0252|consen 310 AGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQLMGFFI 387 (538)
T ss_pred HHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHHHhhHHH
Confidence 33666677888877777665554 44544333332 11111 223334667788899997 999999999998
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhh
Q 008096 94 YQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 173 (577)
Q Consensus 94 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (577)
+.+-.+.++..-+ + .. + ....+...-+.+-++.-+.......+.+|.||.+. |+...
T Consensus 388 ~~i~~~~~~~~y~--~------------~~-~--~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv------R~t~h 444 (538)
T KOG0252|consen 388 MTIFFFVIAGPYN--Q------------LE-N--TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV------RSTCH 444 (538)
T ss_pred HHHHHHHHcCCcc--c------------cc-c--cCceeehHHHHHHHHhcCCCceeEEeehhhchHHH------hhhhh
Confidence 8887776665321 0 00 1 11112222222334444455566677799999888 99999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcc-----cccchhhhHHHHHHHHHHHHHHHH
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQD-----NVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~-----~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
++-....-+|+++|.....++.+ ..|.+..|++.+.++++..+.-.+
T Consensus 445 GIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 445 GISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred hHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 99999999999999999999988 788999999999888877665443
No 256
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.14 E-value=0.015 Score=62.28 Aligned_cols=161 Identities=13% Similarity=0.120 Sum_probs=96.9
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHII 439 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (577)
.++..+...++..+..|++++ ...|.+. ..+.++.|.+++.++.+++...+.
T Consensus 73 fG~viaa~slg~~i~~liF~~----Ws~k~~~------~k~Pli~s~ii~~~g~llY~~l~~------------------ 124 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGI----WSNKTGS------VKKPLIVSFLIAIIGNLLYLALAY------------------ 124 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcc----cccccCC------cccCHHHHHHHHHHHHHHHHHHHh------------------
Confidence 455556677777778888666 4444442 112288899999999888865541
Q ss_pred ccc-hhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCC
Q 008096 440 IPI-SVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPD 518 (577)
Q Consensus 440 ~~~-~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~ 518 (577)
.+. .-+++....++.|+|.+. ....=.|+.+..-.+.|.++++.......+|..+||.+...+.... .++ -.+.+
T Consensus 125 ~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg-~~G-~~i~~- 200 (488)
T KOG2325|consen 125 VPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLG-EKG-FMILP- 200 (488)
T ss_pred cccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhc-CCc-eEEcC-
Confidence 112 445667788888888433 2344456777666666777777777777777777777766653322 110 12222
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 008096 519 NNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTF 553 (577)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 553 (577)
++..+-+...-|+.+.+.++.+++.+++.+|...
T Consensus 201 -~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 201 -GLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred -cceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 1223333334466677777777777777666433
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.98 E-value=0.012 Score=53.65 Aligned_cols=113 Identities=13% Similarity=0.205 Sum_probs=81.6
Q ss_pred ChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhH
Q 008096 51 PLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLA 130 (577)
Q Consensus 51 s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (577)
++.....-.++......+.+++...+.++. |.|+++++|.+.+.+-...... ++.+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-----------------------~~~~ 90 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-----------------------PNSY 90 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-----------------------hhHH
Confidence 333334444555556667777888888987 9999999998877754433321 1577
Q ss_pred HHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 008096 131 ILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVY 193 (577)
Q Consensus 131 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~ 193 (577)
.++.+-++.|+|.+..+.+.-.++.+..++++ |++..+++-...+.+.++|.++.-.
T Consensus 91 ~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 91 TLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999998877655 6666777666666666666655433
No 258
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.76 E-value=0.0092 Score=48.05 Aligned_cols=67 Identities=6% Similarity=0.024 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 008096 38 ANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSA 105 (577)
Q Consensus 38 ~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~ 105 (577)
+.+.+.|+++.++|.++.+++.+.-.+++.++.+...++.++. .+++.+..+.+...+..+.+++..
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3345567789999999999999999999999999999999986 888999999999999999999865
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.75 E-value=0.007 Score=65.22 Aligned_cols=127 Identities=15% Similarity=0.207 Sum_probs=109.5
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhh-hhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 008096 39 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGA-FVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQG 117 (577)
Q Consensus 39 ~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G-~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (577)
.++.|+...++++..+.+...+..+....+.+++.. .+.-.+ |-|+.+..|++...+.....+++.
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~~~~~~~~~~af~~------------ 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLLSEFLQLLLFAFAT------------ 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHHHHHHHHHHHHHhc------------
Confidence 446778888999999999999999999999999888 667666 999999999999999999999987
Q ss_pred CCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhc
Q 008096 118 DQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQ 195 (577)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~ 195 (577)
+.|.++....+.++. +...|...++.+.+.++++ +++.+++.+....+..+++|.+-+.+.
T Consensus 330 ----------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 ----------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred ----------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 566677777666655 5667999999999999998 999999999999999999999877654
No 260
>PRK03612 spermidine synthase; Provisional
Probab=96.66 E-value=0.078 Score=58.29 Aligned_cols=168 Identities=10% Similarity=0.009 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHH---HHHHHHHHh
Q 008096 28 CEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQ---IGMFSLTLS 104 (577)
Q Consensus 28 ~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~---i~~~~~~~~ 104 (577)
+..+..-+.-....-.++-.+|-+..+.+.+.+.+..+..+++.++|+++++- -++. ..+-..+.. ++..++...
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~-~~~e~~i~l~~~~~~~ll~~~ 102 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGF-VAVELLLALLGGLSALILYAA 102 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334445556667789999999999999999999999999887543 2222 222111111 111111111
Q ss_pred hhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHH
Q 008096 105 AILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAV 184 (577)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 184 (577)
..+. ......++...++.++..|+..|....+..+... ++ -++..|-.|....+|+
T Consensus 103 ~~~~-----------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ntlGa 158 (521)
T PRK03612 103 FAFQ-----------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAADYLGA 158 (521)
T ss_pred HHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhHHhHHH
Confidence 1000 0011223344455677778777777776654322 11 3455677778888889
Q ss_pred HHHHHHHHhhcc-cccch-hhhHHHHHHHHHHHHHHHHc
Q 008096 185 LVAVTVLVYIQD-NVGWN-WGLGIPTVAMFLSIIAFVFG 221 (577)
Q Consensus 185 ~lg~~i~~~l~~-~~gw~-~~f~~~~~~~~~~~~~~~~~ 221 (577)
++|.++.+++.- .+|-. ..+.++.+-.++++++++..
T Consensus 159 ~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 159 LVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888776543 56644 33444443344444444433
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.58 E-value=0.00037 Score=76.71 Aligned_cols=137 Identities=13% Similarity=0.163 Sum_probs=2.9
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-----H-------H
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQ-----A-------A 427 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~-----~-------~ 427 (577)
.+.+.+.+-++.++...++.+ +++|. ++.+++.+|.++++++.++.++-.-.... . .
T Consensus 40 ~G~i~s~~di~~~~~~~~vsy----~g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 40 SGLISSSYDIGSLVVVLFVSY----FGGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH----Hhhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 456666677777777776665 55442 23356888999888888776642100000 0 0
Q ss_pred HhcCCCC--------C--------CCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhH
Q 008096 428 LAHGLVD--------K--------PHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSI 491 (577)
Q Consensus 428 ~~~~~~~--------~--------~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~l 491 (577)
....+|+ + +.......+..++++.+++|+|..-..+...+|+-|.++++.-+.+.|+...+..+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 0112330 0 01112223455677889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 008096 492 GNYVSTLLVTLVHKFS 507 (577)
Q Consensus 492 g~~l~~~i~~~v~~~~ 507 (577)
|..+|-++.+...+..
T Consensus 189 GPa~Gf~lg~~~L~~y 204 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIY 204 (539)
T ss_dssp ----------------
T ss_pred cHHHHHHHHHHHHhce
Confidence 9999988887765543
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.17 E-value=0.048 Score=61.12 Aligned_cols=139 Identities=13% Similarity=0.130 Sum_probs=93.8
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHH----HHHHHHHH----hcC
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVE----MKRKQAAL----AHG 431 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~----~~~~~~~~----~~~ 431 (577)
.+.+.+.+-++..+....+++ ++.|. + ..+++.+|.++++++.++.++-. ........ .++
T Consensus 134 sG~I~s~~dig~~l~i~fVsY----fG~r~-H------rPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~ 202 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSY----FGSRG-H------RPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVEN 202 (735)
T ss_pred ceeEeeecccchhhhhHhHHH----hcccc-C------ccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccC
Confidence 456666666666666666666 55443 2 22347889999888877766431 11111111 001
Q ss_pred C---------------C--CCCCc----cc-cchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHH
Q 008096 432 L---------------V--DKPHI----II-PISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTAN 489 (577)
Q Consensus 432 ~---------------~--~~~~~----~~-~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~ 489 (577)
. + .+++. .. ...+..++.+.++.|+|..-.++....|+-|-+.++.-+.+.|+.++..
T Consensus 203 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 203 PSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred CccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 1 0 00111 11 1234456778899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhcCC
Q 008096 490 SIGNYVSTLLVTLVHKFSAG 509 (577)
Q Consensus 490 ~lg~~l~~~i~~~v~~~~~~ 509 (577)
.+|-++|-++.++..+....
T Consensus 283 ~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred HhhhHHHHHHHHHHHHeeec
Confidence 99999999998888776644
No 263
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.02 E-value=0.039 Score=62.21 Aligned_cols=66 Identities=35% Similarity=0.628 Sum_probs=60.7
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHH
Q 008096 437 HIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTL 502 (577)
Q Consensus 437 ~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~ 502 (577)
...+..+.+|.++++++.+.+|.+.....+++..+.+|+++|+.+.+++....++|+.+...+...
T Consensus 558 ~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~ 623 (654)
T TIGR00926 558 VSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEF 623 (654)
T ss_pred cCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999999999999999999999999999999888654
No 264
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.77 E-value=0.12 Score=50.91 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=64.1
Q ss_pred hhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHH
Q 008096 382 IIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFM 461 (577)
Q Consensus 382 ~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~ 461 (577)
.+.+.|+.+ |...+.+|.+...+++...-..- ++. ....+.|.+....++.+.+....
T Consensus 56 ~G~l~d~~g-------p~~~l~iG~~~~~~GY~~~~l~~--------~~~-------i~~~~~~~~~~~~~l~~~s~~~~ 113 (250)
T PF06813_consen 56 AGLLYDRFG-------PWVVLLIGAVLGFVGYGLLWLAV--------SGR-------IPSLPVWLMCLFLFLGGNSSCWF 113 (250)
T ss_pred HHHHHHhcc-------hHHHHHHHHHHHHHHHHHHHHHH--------hCc-------cCccchHHHHHHHHHHcccHHHh
Confidence 344666653 33337888888888887654432 110 11234455555555555666666
Q ss_pred hhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008096 462 SVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLV 503 (577)
Q Consensus 462 ~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v 503 (577)
+........+.+|+ .||++.|+.-...++++.+-..+...+
T Consensus 114 ~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 114 NTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred hhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 66666667788885 699999999999999888877775543
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.49 E-value=0.11 Score=54.60 Aligned_cols=124 Identities=15% Similarity=0.148 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcc---c
Q 008096 401 RMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPES---M 477 (577)
Q Consensus 401 ~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~---~ 477 (577)
.+.+|.++..++.+++..... . +......+...+.++..+.++|.++.=|....+..|+.+++ .
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~--------~-----~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~ 69 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAI--------P-----PSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSR 69 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHT--------S-----SSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTH
T ss_pred hhhHHHHHHHHHHHHhHHHHh--------c-----chhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhh
Confidence 367788888888877555430 0 00011234456777888899999999999999999999876 4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhccccc
Q 008096 478 RSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFK 554 (577)
Q Consensus 478 rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 554 (577)
|..+...+..+.++|+.++..+.+++.+. .++.+.|.+.++..+++.+.++...++++.+
T Consensus 70 ~~~~F~~fY~~in~G~~~~~~~~~~i~~~-----------------~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 70 RDSFFNWFYWGINIGSLFSPTLVPYIQQN-----------------YGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHC-----------------S-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhHHHHHHHHhhhhHhhcccchhhccc-----------------cchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 56666677788999999999888776532 2345667888888888888777776665554
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.34 E-value=5 Score=43.14 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHH
Q 008096 444 VLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLV 500 (577)
Q Consensus 444 ~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~ 500 (577)
-++.++..+++|+..|........+..+..+++.|..+..+...+-.+|-.+|..+.
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455678899999999999999999999999999999999988888888887774
No 267
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.20 E-value=0.02 Score=60.94 Aligned_cols=142 Identities=12% Similarity=0.119 Sum_probs=99.1
Q ss_pred hHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhH
Q 008096 367 TMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLW 446 (577)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (577)
....+.+...+.++ ++||...++ +.+..|.++++++.++++... ..+...
T Consensus 70 y~slVY~t~i~GG~----laDr~LG~~------~tI~lGail~~iGh~~L~~~~--------------------~~~~~g 119 (498)
T COG3104 70 YGSLVYLTPIIGGW----LADRVLGTR------RTIVLGAILMAIGHLVLAISS--------------------VSGPGG 119 (498)
T ss_pred HHHHHHHHHHHHHH----HHHHhcchh------HHHHHHHHHHHHHHHHHhccc--------------------cccccH
Confidence 33444555555555 444443222 237888899999988776531 024556
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcccCcc--cHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcc
Q 008096 447 LVPQYSLHGIAEAFMSVGHLEFLYDQAPES--MRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKG 524 (577)
Q Consensus 447 l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~--~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~ 524 (577)
+.+...+.++|.+..=+.....+.|..|++ .|-.+.+++.++.++|+.++|.+.+++.+..
T Consensus 120 l~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~----------------- 182 (498)
T COG3104 120 LYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY----------------- 182 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-----------------
Confidence 677788888999999999999999998853 3666777778888999999999999975543
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhcccccc
Q 008096 525 KLEYFYWLITLLQVVNVIYYFFCAKIYTFKP 555 (577)
Q Consensus 525 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 555 (577)
++...|.+.++-..++++.+++..+..+...
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 2345577778888888888888766555433
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.60 E-value=4.7 Score=43.50 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC
Q 008096 445 LWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSA 508 (577)
Q Consensus 445 ~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~ 508 (577)
..++...++..+.....+....++-++++.|.+-||+|.+.|+..++|+---..++-.+.|..+
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 4455677778888888888899999999999999999999999999988777777677666543
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.50 E-value=0.23 Score=53.32 Aligned_cols=113 Identities=22% Similarity=0.303 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhccc---CcccH
Q 008096 402 MGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQA---PESMR 478 (577)
Q Consensus 402 ~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~---P~~~r 478 (577)
+.+|.++.+++.+.++.... ...+........++..+|..+.-...-..+.|.+ |++ +
T Consensus 62 ~~i~~~~~~~~~~~~~~~~~------------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~ 122 (433)
T PF03092_consen 62 MIIGWLLGAVSALVLALLPA------------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-R 122 (433)
T ss_pred HHHHHHHHHHHHHHHHhccc------------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-h
Confidence 77787777666666655440 0112233344456667777777777776666665 444 8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 008096 479 STATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKI 550 (577)
Q Consensus 479 g~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 550 (577)
|..++....++.+|+.++..+.|.+.+.. +....|.+.+.+..+..+..+++.+|
T Consensus 123 g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 123 GDLQSFVWGVRSVGSLVGSLLSGPLLDSF-----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcC-----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 89999999999999999999988765432 11223556666666665555655554
No 270
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.93 E-value=0.22 Score=52.62 Aligned_cols=130 Identities=15% Similarity=0.152 Sum_probs=93.8
Q ss_pred cchhhhhhHHHHHHHHHhhhhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc-
Q 008096 360 AGSMSVFTMVSMLSTIALYDRIIIPVARKFTGLDRGITFLHRMGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHI- 438 (577)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 438 (577)
.+.+....++..++.+|+.+...|+.-.|++||++ . +..+....+++++++.+... . .+-++||+..
T Consensus 69 ~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP----f--I~~~s~~i~~~l~Lig~aaD----i--g~~lgd~~~~~ 136 (498)
T KOG0637|consen 69 SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP----F--ILAGSLLIAVSLFLIGYAAD----I--GLLLGDNERKP 136 (498)
T ss_pred ccccccccccccceecccccccccccccccccccc----h--HHHhhHHHHHHHhhhhhHhh----h--hHHhcCCcccc
Confidence 34556667888889999999999999999998864 2 56677777788877776541 1 1223345443
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHH-HHHHHHHHHhHHHHHHHHHHH
Q 008096 439 IIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRST-ATALFWTANSIGNYVSTLLVT 501 (577)
Q Consensus 439 ~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~-~~gi~~~~~~lg~~l~~~i~~ 501 (577)
.........++.+-+.-+..-....++=++..|+.-++.+.+ +.+.+...-++|+.+|-.+.+
T Consensus 137 ~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 137 VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 333444455566666777777777888889999987777777 999999999999999877744
No 271
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.82 E-value=1.8 Score=43.57 Aligned_cols=158 Identities=12% Similarity=0.125 Sum_probs=87.1
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CC-----hHHHHHHHHHHhHhhhhchhhhhhhhhhccch
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLH---------MP-----LTKAANTLTNFGGTGSLTPLIGAFVADTYAGR 83 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg---------~s-----~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Gr 83 (577)
.........+|+++.|..+..---.-+.++.+ .| ....+.+..+=.+-..+..+..-.+-||+ -.
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rf-pf 91 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRF-PF 91 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhc-cc
Confidence 34445567788888876554443333333332 00 11134455555556666667777888887 32
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCc
Q 008096 84 FWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDP 163 (577)
Q Consensus 84 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 163 (577)
-+-+.+..++.+.+..+.+++. +.+.-+++..+..++.|.-...-.++-+ .+|...
T Consensus 92 ~~Ri~~~v~~sa~s~~lVafs~----------------------s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~~~- 147 (409)
T KOG3880|consen 92 GFRIALVVLLSALSFFLVAFSN----------------------SVPMSLLGVVFASISSGLGEITFLALSS-RYPSIV- 147 (409)
T ss_pred chHHHHHHHHHhcceEEEEecc----------------------chhHHHhhhhhhhhcCCcceeehhhhhc-cCCCce-
Confidence 2223334455566767777665 5666888888888888887666666544 355433
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccc--ccchhhhHHHHH
Q 008096 164 KQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDN--VGWNWGLGIPTV 209 (577)
Q Consensus 164 ~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~--~gw~~~f~~~~~ 209 (577)
.+....+..-++++|..--..+.+. ++-+....+...
T Consensus 148 ---------i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~ 186 (409)
T KOG3880|consen 148 ---------IAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLF 186 (409)
T ss_pred ---------eccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHH
Confidence 3333333344455554444445442 344445544443
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.96 E-value=1.9 Score=46.08 Aligned_cols=138 Identities=12% Similarity=0.021 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 008096 35 GFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPP 114 (577)
Q Consensus 35 ~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 114 (577)
+.-..+..|+..+ |+|..+.|..-+...+.+..+.....++.+|+ |-.|+=.++......+..++..+-..|.
T Consensus 276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~----- 348 (432)
T PF06963_consen 276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPG----- 348 (432)
T ss_pred cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 3345577888766 99999999999999999999999999999998 9988888887776666665554432222
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 008096 115 CQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLV 192 (577)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~ 192 (577)
...+..+...++.+..+.=+|.=++=-+..-++.|..|+++ |+...+..+...++.-.+...++-
T Consensus 349 -------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 349 -------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred -------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 00012355556666666666666666777888999999888 999999999999998888765543
No 273
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.87 E-value=3.6 Score=42.56 Aligned_cols=84 Identities=11% Similarity=-0.017 Sum_probs=55.9
Q ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 17 ITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
+..+++.+..+..++.--+...-...||..=.|=|..-.+.-...-+....+..++.|..-|+. .|+|++...+.+.=+
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~-sr~Kvi~~~L~lqNl 105 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGM-SRVKVIQTWLLLQNL 105 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcch-hHHHHHHHHHhhccH
Confidence 4456667777777666666666667788654453444444444455566677778888899997 999999888776444
Q ss_pred HHHHH
Q 008096 97 GMFSL 101 (577)
Q Consensus 97 ~~~~~ 101 (577)
+.+.+
T Consensus 106 Sv~va 110 (503)
T KOG2601|consen 106 SVIVA 110 (503)
T ss_pred HHHHH
Confidence 44333
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.55 E-value=2.4 Score=38.59 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=52.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 008096 443 SVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLV 503 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v 503 (577)
+.+.+++.-++.|++.+......-.++.+..+++.+++-.|++......+..+|..+.-.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788889999999999988888999999999999999999999888888887775443
No 275
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.40 E-value=8.1 Score=42.12 Aligned_cols=136 Identities=7% Similarity=-0.032 Sum_probs=77.4
Q ss_pred ChHHHHHHHHHHhH-hhhhchhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccc---cc
Q 008096 51 PLTKAANTLTNFGG-TGSLTPLIGAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEA---DT 126 (577)
Q Consensus 51 s~~~~~~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 126 (577)
.+.....+-....+ .+.+...+-.+++|++ +|.+.+-+....+..-..+.++.- +|. .+.-|++..+... .+
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vl-yP~--~~~lhp~~~~~~~~~~~~ 131 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVL-YPN--RDILHPDAFADKLLAILP 131 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHH-hhc--hhhcCCCHHHHHhhhhcc
Confidence 44444444443333 5556677889999998 999988776666665555555543 231 1112233222110 01
Q ss_pred ch---------hHHHHHHHHHHHhccCCccc-chhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 008096 127 GQ---------LAILYASLLLAALGSGGIRP-CVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQD 196 (577)
Q Consensus 127 ~~---------~~~~~~~~~l~g~g~g~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~ 196 (577)
.. .|...+.-++.-+=.....+ .-+++..|.++.+| -.+.+++++.+.|+|.+++..+..++.+
T Consensus 132 ~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 132 PGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111111111111111122 34788899998777 6678999999999999999888877766
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.71 E-value=7.4 Score=42.21 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhh-hhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Q 008096 449 PQYSLHGIAEAFMSV-GHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKF 506 (577)
Q Consensus 449 ~~~~l~gi~~~~~~~-~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~ 506 (577)
..++...+...+... ..|.++.|....++-.+..++....+++|..+++.+...+.+.
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555555555554 8899999999999999999999999999999999998887653
No 277
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.66 E-value=0.54 Score=48.01 Aligned_cols=95 Identities=6% Similarity=-0.009 Sum_probs=54.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCC
Q 008096 443 SVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLN 522 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~ 522 (577)
+.|+..+.+++...-..+..+....-+++....+.-|...|++.++.-+ +=+++.-.+.|..+.+ .+--.+
T Consensus 325 ~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~---lQsilT~iVvd~~g~~------L~ir~Q 395 (433)
T KOG3810|consen 325 HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALI---LQSILTLIVVDDRGLG------LDIRTQ 395 (433)
T ss_pred ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHH---HHHhheEEEEcccccC------CCccee
Confidence 6777888888887777777777777777776777778888876654332 2222222233322110 000011
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhh
Q 008096 523 KGKLEYFYWLITLLQVVNVIYYFF 546 (577)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~i~~~~ 546 (577)
..-+..+|.+++++.++...+.+.
T Consensus 396 ~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 396 FVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred EEEEeehHHHHHHHHHHHHHHHHH
Confidence 122345677777777777655443
No 278
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=90.90 E-value=2.8 Score=42.64 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=70.1
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHH
Q 008096 18 TMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIG 97 (577)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 97 (577)
.-..++-..+...+..|.-..++......++| ....+.+....... +++.+.+..++ |.|.++.++...+...
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg--~~sl~~~y~~l~~s----~m~~~~~Ir~~-g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNYDLG--TVSLGALYLSLIDS----SMFMPLLIRFL-GTKWTMVLAVFPYALY 101 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc--cchhhhhhHHHHHH----HHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 33445556666666667666666665554333 33333333333333 33444666665 9999999887665542
Q ss_pred HHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCC
Q 008096 98 MFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDE 160 (577)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 160 (577)
.+.++. +.+..++-+-...|+|.+..+.+--+|++++-..
T Consensus 102 -----iA~Nl~------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 102 -----IAANLE------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred -----HHhhcc------------------hhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 233222 2566777778889999999998888888776543
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.79 E-value=24 Score=37.20 Aligned_cols=57 Identities=21% Similarity=0.225 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHH
Q 008096 443 SVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLL 499 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i 499 (577)
+-++.+....++|+..+-.......+..+..|++.+-.+..+....-..|-.+|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 445666677889999998888999999999999999988888887777777777655
No 280
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.72 E-value=27 Score=37.67 Aligned_cols=166 Identities=8% Similarity=-0.023 Sum_probs=98.4
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---ChHHHHHHHHHHhH-hhhhchhhhhhhhhhccchhHHHH
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHM---PLTKAANTLTNFGG-TGSLTPLIGAFVADTYAGRFWTIT 88 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~---s~~~~~~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~~ 88 (577)
|.-++.++.+.+..+|-.+.++.+.. +.|.+.+ .+.....+-+.... .+.+..++-+++.+++ .|.+++-
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~ 96 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFY 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHH
Confidence 44555666666666666555443322 3444543 44455555555555 6677888899999998 9999988
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCc--------c--------cccccchhHHHHHHHHHHHhccCCccc-chh
Q 008096 89 VASIIYQIGMFSLTLSAILPQLRPPPCQGDQV--------C--------KEADTGQLAILYASLLLAALGSGGIRP-CVV 151 (577)
Q Consensus 89 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~~~~~~l~g~g~g~~~~-~~~ 151 (577)
+-+..+....+++++.- .|. ...-|++.. . ...+.++...+++.-=+.| ....+ .-.
T Consensus 97 ~~~~~F~~fF~LFa~Vi-~P~--~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWg---slV~S~lFw 170 (509)
T COG3202 97 IILGFFLGFFALFAFVI-YPY--KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWG---SLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHHHHH-hcc--ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHH---HHHHHHHHH
Confidence 88877777777777765 332 111122200 0 0011112222222211111 11111 335
Q ss_pred hhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 008096 152 AFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQD 196 (577)
Q Consensus 152 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~ 196 (577)
....|....+| -.+.++.++.+.|++..++..+..++..
T Consensus 171 ~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 171 QFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66778777766 6688999999999999999888887765
No 281
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.62 E-value=1.8 Score=45.73 Aligned_cols=61 Identities=10% Similarity=0.004 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 008096 128 QLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYI 194 (577)
Q Consensus 128 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l 194 (577)
+.+..++..+.-|+..|..+.+....+.|..|+++ |..+++...++-.+|..+|.+++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67778888888999999999999999999888776 99999999999999999988776554
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.86 E-value=4.8 Score=43.33 Aligned_cols=112 Identities=20% Similarity=0.145 Sum_probs=71.0
Q ss_pred Hhhhhchhhhhhhh---hhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHH
Q 008096 64 GTGSLTPLIGAFVA---DTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAA 140 (577)
Q Consensus 64 ~~~~~~~~~~G~la---Dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 140 (577)
.+..++.++.+.++ +++ ||++++.++..+..++.++.-+.. |.- +| -.+.+.-..-.+++..+.++.-+++|
T Consensus 290 ~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~l~~--p~d-ap-~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIHLSF--PND-AP-LRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHhccc--ccc-CC-CCCCcccccccccchhHHHHHHHHHh
Confidence 33444455555555 455 899999999888777766665543 320 00 11112222223345667777788999
Q ss_pred hccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 008096 141 LGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVA 187 (577)
Q Consensus 141 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg 187 (577)
++-+..+...+..+++.+| ++ |..+++++..-..++..++
T Consensus 365 ~~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred hHHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999995 44 6666777655555555444
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=89.81 E-value=12 Score=39.75 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHHH
Q 008096 402 MGIGFVISVLATLVAGFVEMKRKQAALAHGLVDKPHIIIPISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRSTA 481 (577)
Q Consensus 402 ~~ig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~ 481 (577)
++.+.+...+...++.+.. +..++-+..++.|++... -...++|+...+|++.--.+
T Consensus 74 iil~~~~~i~t~~lll~~~----------------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 74 IILQALSYIITWLLLLFGT----------------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHHHHHHHHHHHC----------------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHH
Confidence 6666666666655555544 666666677777777443 56677899999999888888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhh
Q 008096 482 TALFWTANSIGNYVSTLLVTLVHK 505 (577)
Q Consensus 482 ~gi~~~~~~lg~~l~~~i~~~v~~ 505 (577)
++....+.-+|..++..+...+..
T Consensus 131 ts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 131 TSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888888888777666543
No 284
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=86.88 E-value=35 Score=35.40 Aligned_cols=93 Identities=12% Similarity=0.005 Sum_probs=47.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhh-----hhcccCcccHHHHHHHHH-HHHhHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 008096 443 SVLWLVPQYSLHGIAEAFMSVGHLEF-----LYDQAPESMRSTATALFW-TANSIGNYVSTLLVTLVHKFSAGPNGSNWL 516 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~~~~~~~~~~-----v~~~~P~~~rg~~~gi~~-~~~~lg~~l~~~i~~~v~~~~~~~~~~~~~ 516 (577)
+...+++.-++.|++....+...-+. -.+-.|++..+...+... ..+.+-..++..+.-.+.+..+.+.
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~----- 194 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP----- 194 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC-----
Confidence 56667778888888887777764443 223345554444444333 2334444444444434333222110
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 008096 517 PDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKI 550 (577)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 550 (577)
..-|.....+.+++.++....++|
T Consensus 195 ----------vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 195 ----------VAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred ----------cchHHHHHHHHHHHHHHHHhcccc
Confidence 112556666666666655554444
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=86.75 E-value=4.3 Score=40.19 Aligned_cols=141 Identities=10% Similarity=0.041 Sum_probs=88.2
Q ss_pred HHHHHHHHhHhhhhchhhhhhhhhhccchh--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHH
Q 008096 55 AANTLTNFGGTGSLTPLIGAFVADTYAGRF--WTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAIL 132 (577)
Q Consensus 55 ~~~i~~~~~~~~~~~~~~~G~laDr~~Grk--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (577)
-|.+.+.+....++++-+..++..|- ..| +.+.+..++......+..+.. .. .|+ ..+...-
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~-~v-------sP~-------kes~~~s 347 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTS-SV-------SPS-------KESPSES 347 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHh-cc-------CCC-------cCCchHH
Confidence 37788888888888888777777653 222 234444433333333333222 11 111 1234445
Q ss_pred HHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHH
Q 008096 133 YASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMF 212 (577)
Q Consensus 133 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~ 212 (577)
+++..+.-.+.|.++|...-+=.+..|+++ |+..++++..-.++-..++-...-.=..-.+-|..|.++.+.+.
T Consensus 348 ~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~ 421 (454)
T KOG4332|consen 348 LIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLF 421 (454)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHH
Confidence 777788888999999999999999999988 99999999888887655432110000111356677888877776
Q ss_pred HHHHH
Q 008096 213 LSIIA 217 (577)
Q Consensus 213 ~~~~~ 217 (577)
++.+.
T Consensus 422 ~a~i~ 426 (454)
T KOG4332|consen 422 VASIL 426 (454)
T ss_pred HHHHH
Confidence 66554
No 286
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=85.68 E-value=12 Score=36.96 Aligned_cols=56 Identities=11% Similarity=0.202 Sum_probs=34.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhh---cc--cccchhhhHHHHHHHHHHHHHHHHcccc
Q 008096 169 TWKYFNWYYFVMGAAVLVAVTVLVYI---QD--NVGWNWGLGIPTVAMFLSIIAFVFGYPL 224 (577)
Q Consensus 169 r~~~~~~~~~~~~ig~~lg~~i~~~l---~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 224 (577)
|+....+..++.++|+++.-+..-.- .+ .-.|++.+.+.+++.++-+++.....++
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66667777778888888875442211 11 1249888877777666655555554443
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=85.67 E-value=8.8 Score=37.24 Aligned_cols=62 Identities=23% Similarity=0.209 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhcccCc-ccHHHHHHHHHH-HHhHHHHHHHHHHHHHhh
Q 008096 444 VLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPE-SMRSTATALFWT-ANSIGNYVSTLLVTLVHK 505 (577)
Q Consensus 444 ~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~-~~rg~~~gi~~~-~~~lg~~l~~~i~~~v~~ 505 (577)
.+.+.......+++.+...+....++.+..|+ +.|+...+.... ...+|..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555558888888999999999999998 678998888887 577788888877666544
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.37 E-value=10 Score=40.77 Aligned_cols=144 Identities=8% Similarity=-0.065 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCCh-HHHHHHHHHHhHhhhhchhhhhhhhhhccchh-HHHHHHHHHHHHHHHHHH
Q 008096 29 EKLAVVGFHANMISYLTTQL----HMPL-TKAANTLTNFGGTGSLTPLIGAFVADTYAGRF-WTITVASIIYQIGMFSLT 102 (577)
Q Consensus 29 ~~~~~~~~~~~l~~~l~~~l----g~s~-~~~~~i~~~~~~~~~~~~~~~G~laDr~~Grk-~~~~~~~~~~~i~~~~~~ 102 (577)
..+.+.......|.+..+.. +.+. .-.-.....|+++-.++..+..+.. +-++| +.+.+..+.=.+-..+..
T Consensus 278 vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~--~p~~~~~~l~i~s~~R~iFIPlf~ 355 (437)
T TIGR00939 278 VVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM--WPDEDSRWLPILSFLRVLFIPLFL 355 (437)
T ss_pred HHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE--eeCCCccchHHHHHHHHHHHHHHH
Confidence 33344444455566553321 1222 2445777788888888887665431 11222 133333333222222222
Q ss_pred HhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHH
Q 008096 103 LSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 182 (577)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 182 (577)
+...-|.. ...+.-.+-+..++..++.|+..|...+....+..+..+++| |..+-.+...+..+
T Consensus 356 lcn~~~~~----------~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~ 419 (437)
T TIGR00939 356 LCNYPQRS----------RLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLV 419 (437)
T ss_pred HhcCCccc----------cCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHH
Confidence 22200000 000011234556677889999999999999999988887665 66666666666777
Q ss_pred HHHHHHHH
Q 008096 183 AVLVAVTV 190 (577)
Q Consensus 183 g~~lg~~i 190 (577)
|-.+|..+
T Consensus 420 Gl~~Gs~l 427 (437)
T TIGR00939 420 GLALGAVL 427 (437)
T ss_pred HHHHHHHH
Confidence 77666544
No 289
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=73.18 E-value=14 Score=38.73 Aligned_cols=49 Identities=8% Similarity=0.055 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHH
Q 008096 452 SLHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLV 500 (577)
Q Consensus 452 ~l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~ 500 (577)
+++.+....--...-....++..++..|-+..........|-+++..+.
T Consensus 141 ~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 141 LLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 3334433333344444555566666666666665556666666665553
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=73.05 E-value=1.5e+02 Score=32.45 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=40.0
Q ss_pred HhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 008096 461 MSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVHK 505 (577)
Q Consensus 461 ~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~ 505 (577)
.+-..|.++-|..+.++..+..+++....++|..+++.++..+.+
T Consensus 161 lSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 161 LSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333578999999999999999999999999999999999888766
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.40 E-value=11 Score=31.50 Aligned_cols=43 Identities=19% Similarity=0.071 Sum_probs=31.2
Q ss_pred HHHHHHHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 008096 56 ANTLTNFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQIGM 98 (577)
Q Consensus 56 ~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 98 (577)
..-.+.-.+.+.+.....||+.|+|.|.++.-++..++..++.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 3444555677777788899999999999998766655554443
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=61.65 E-value=1.5e+02 Score=31.37 Aligned_cols=38 Identities=13% Similarity=-0.046 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccHHH
Q 008096 443 SVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPESMRST 480 (577)
Q Consensus 443 ~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~~~rg~ 480 (577)
..+......++.+++.+......+......-|+..++.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqav 153 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAV 153 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHH
Confidence 33444556667777888877777776665544444333
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=58.32 E-value=1.1e+02 Score=33.45 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=22.5
Q ss_pred hhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 008096 468 FLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVH 504 (577)
Q Consensus 468 ~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~ 504 (577)
.+..+..++.++.|..-......+|-+++-.+.-.+.
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 3444555666777766666666667777666655543
No 294
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.96 E-value=77 Score=26.66 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=28.2
Q ss_pred cCcccHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 008096 473 APESMRSTATALFWTANSIGNYVSTLLVTLVHKFS 507 (577)
Q Consensus 473 ~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~~~~ 507 (577)
.-++.++.++++-...-.+++.+..+..|++.|..
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577888888888888888888888888887765
No 295
>PRK03612 spermidine synthase; Provisional
Probab=53.90 E-value=1.9e+02 Score=31.86 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhhhhhhhhcccCcccHHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 008096 453 LHGIAEAFMSVGHLEFLYDQAPESMRSTATALFWTANSIGNYVSTLLVTLVH 504 (577)
Q Consensus 453 l~gi~~~~~~~~~~~~v~~~~P~~~rg~~~gi~~~~~~lg~~l~~~i~~~v~ 504 (577)
+.++..++..|...-...+.. .+.-|...|-....+.+|+.+|+++.+++.
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 344555555555444443321 122355667777888888888888888753
No 296
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=50.83 E-value=81 Score=31.16 Aligned_cols=16 Identities=25% Similarity=0.264 Sum_probs=7.5
Q ss_pred HHHHHHHHHHhhhhhc
Q 008096 535 LLQVVNVIYYFFCAKI 550 (577)
Q Consensus 535 ~~~~~~~i~~~~~~~~ 550 (577)
++.+++.+++.+..++
T Consensus 123 ~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 123 ALVLVSGIIFSFIKSE 138 (254)
T ss_pred HHHHHHHHheeeecCC
Confidence 3344555555554433
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=50.72 E-value=95 Score=34.68 Aligned_cols=97 Identities=14% Similarity=0.250 Sum_probs=67.1
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhhhhcccCc----ccHH--HHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCC
Q 008096 442 ISVLWLVPQYSLHGIAEAFMSVGHLEFLYDQAPE----SMRS--TATALFWTANSIGNYVSTLLVTLVHKFSAGPNGSNW 515 (577)
Q Consensus 442 ~~~~~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~----~~rg--~~~gi~~~~~~lg~~l~~~i~~~v~~~~~~~~~~~~ 515 (577)
.....+...+-+.++|.+..-|+..++..|+.++ ..+. ..+..+....++|..++..+..++-+. .+|
T Consensus 150 ~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~------~~w 223 (571)
T KOG1237|consen 150 LQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN------VGW 223 (571)
T ss_pred HHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhc------ccc
Confidence 3444556666777789999999999999999982 2222 455566677888888888776665332 255
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHHHHHHhhhhhcccccc
Q 008096 516 LPDNNLNKGKLEYFYWLITLLQVVNVIYYFFCAKIYTFKP 555 (577)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 555 (577)
... |...++..++++++++...+.++.++
T Consensus 224 ~lg-----------f~i~~~~~~lai~iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 224 KLG-----------FGIPTVLNALAILIFLPGFPFYRYKK 252 (571)
T ss_pred eee-----------ccHHHHHHHHHHHHHHcCceeEEeeC
Confidence 544 77788888888888777766665444
No 298
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=44.57 E-value=51 Score=32.70 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=52.3
Q ss_pred CCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhHhhhhchhhhhhh---------hhhccch
Q 008096 13 KGGIITMPFIFANEVCEKLAVVGFHANMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFV---------ADTYAGR 83 (577)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~s~~~~~~i~~~~~~~~~~~~~~~G~l---------aDr~~Gr 83 (577)
.++|+.+...++ -+.+....-...+++-.|++ +.|.++++..+++.+..++-++..++.|.+ .||+ ||
T Consensus 14 igr~svf~yGvG-HmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~ 90 (412)
T KOG4830|consen 14 IGRTSVFAYGVG-HMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GR 90 (412)
T ss_pred ccceeeeeechh-HHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cc
Confidence 566677666555 22233333334577778886 678899899999999999999999998754 5787 88
Q ss_pred hHHHH
Q 008096 84 FWTIT 88 (577)
Q Consensus 84 k~~~~ 88 (577)
|+...
T Consensus 91 ~~~wh 95 (412)
T KOG4830|consen 91 RMSWH 95 (412)
T ss_pred eeeee
Confidence 87643
No 299
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=44.29 E-value=7.2 Score=39.78 Aligned_cols=116 Identities=9% Similarity=0.072 Sum_probs=3.8
Q ss_pred HHHHHHhHhhhhchhhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHH
Q 008096 57 NTLTNFGGTGSLTPLIGAFVADTYAG-RFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYAS 135 (577)
Q Consensus 57 ~i~~~~~~~~~~~~~~~G~laDr~~G-rk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (577)
.....|+++-.++..+.++. ++.+ +++.+.+..+.=.+-..++.+.+.-|. .......-.+-+..++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~--~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~---------~~~~~~~~~~d~~~~i~ 254 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP--RWPGPSPRWLWILSLLRFLFIPLFLLCNVQPR---------PRYLPVLFNSDAWFIIL 254 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhccee--EecccccccHHHHHHHHHHHHHHHHHHHhhcc---------cccCCCcccchHHHHHH
Confidence 35667889999998888875 2311 233333333322221222221110000 00000001133556777
Q ss_pred HHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 008096 136 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVT 189 (577)
Q Consensus 136 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 189 (577)
.+++|+..|...+....+..+..++++ |..+-.+......+|-.+|..
T Consensus 255 ~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 255 MLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp ------------HHHH--------------------------------------
T ss_pred HHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999998776 555555555555666655543
No 300
>PRK10263 DNA translocase FtsK; Provisional
Probab=40.42 E-value=67 Score=39.01 Aligned_cols=31 Identities=13% Similarity=-0.236 Sum_probs=16.8
Q ss_pred cccCCCcceehHHHHHHHHHHHHHHHHHHHH
Q 008096 10 NRKKGGIITMPFIFANEVCEKLAVVGFHANM 40 (577)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 40 (577)
..++.++..-+.-+..-++..++.|.+.+++
T Consensus 12 ~~~~~~~~rrL~E~~gIlLlllAlfL~lALi 42 (1355)
T PRK10263 12 TLTKLSSGRRLLEALLILIVLFAVWLMAALL 42 (1355)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555556656555554
No 301
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=40.19 E-value=75 Score=22.98 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=24.0
Q ss_pred HHhHhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 61 NFGGTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 61 ~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
.......+.....|+..|++.+.++...+..++..+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 344555666778899999988987766555444443
No 302
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=37.07 E-value=4.4e+02 Score=26.31 Aligned_cols=22 Identities=9% Similarity=0.246 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 008096 399 LHRMGIGFVISVLATLVAGFVE 420 (577)
Q Consensus 399 ~~~~~ig~~~~~l~~~~~~~~~ 420 (577)
.++-...+++..+++..+...+
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~ 157 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIP 157 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 3444556666777777776654
No 303
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=34.40 E-value=3.3e+02 Score=27.08 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=47.1
Q ss_pred HHHHHHHhHhhhhchhhhhhhhhhccchhHHHH----HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHH
Q 008096 56 ANTLTNFGGTGSLTPLIGAFVADTYAGRFWTIT----VASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAI 131 (577)
Q Consensus 56 ~~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (577)
......+..+..+++...|...-.-..||+-+. .++++..++.+....-. ..+..+...
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g-----------------~~~~~~~~~ 206 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVG-----------------PGNAAGFAF 206 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhC-----------------cchHHHHHH
Confidence 444555666666777777877655435555443 23333444333311111 011224566
Q ss_pred HHHHHHHHHhccCCcccchhhhhhccCCCCCc
Q 008096 132 LYASLLLAALGSGGIRPCVVAFGADQFDETDP 163 (577)
Q Consensus 132 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 163 (577)
+++.-++.|...=+++++...+-.| +++.++
T Consensus 207 f~I~~Fl~G~f~WgiQ~ViL~lPhE-yK~~~p 237 (267)
T PF07672_consen 207 FYIFGFLAGFFLWGIQGVILNLPHE-YKGYNP 237 (267)
T ss_pred HHHHHHHHHHHHHhhhHHHhcChhh-hcCCCc
Confidence 7777778777665566655554443 555543
No 304
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=33.09 E-value=88 Score=24.60 Aligned_cols=44 Identities=11% Similarity=0.332 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHH
Q 008096 174 NWYYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMFLSIIAFVF 220 (577)
Q Consensus 174 ~~~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 220 (577)
-+.+....++++++ .+.|++.++ .+.++++.++..++++++...
T Consensus 11 ~l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP 54 (76)
T PF06645_consen 11 KLMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVP 54 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeC
Confidence 34444556666666 567788776 455666666665555555433
No 305
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=32.78 E-value=76 Score=32.43 Aligned_cols=58 Identities=10% Similarity=-0.007 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHhccCCcccchhhhhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 008096 128 QLAILYASLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAVLVAVTVL 191 (577)
Q Consensus 128 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~lg~~i~ 191 (577)
+.+..++..+.=|+-.|....+..--+.+..++++ |..+++...+.-.+|..++..++
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~------rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDV------REFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchH------HHHhHhhheecchhhHHHHHHHh
Confidence 56666666666788878877777777777777666 88889888888788877776554
No 306
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=31.16 E-value=67 Score=25.36 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=30.2
Q ss_pred HHHHHHHhhhhhhhhccccccCCCCCC--------CchhHHHHHHHHHHHHHHHHHHH
Q 008096 370 SMLSTIALYDRIIIPVARKFTGLDRGI--------TFLHRMGIGFVISVLATLVAGFV 419 (577)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~r~~~~~~~~--------~~~~~~~ig~~~~~l~~~~~~~~ 419 (577)
..++.+.++.++.|+++.|.+||+.+. +....+..|+++.+..+.++...
T Consensus 8 ~l~~lgG~IA~~GD~iG~kvGKkrlslFgLRPr~Ta~lVti~TG~~Is~~tl~vl~~~ 65 (79)
T PF11283_consen 8 ALLLLGGLIAYLGDRIGSKVGKKRLSLFGLRPRYTAILVTILTGVLISALTLGVLFLL 65 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhcCCCccceeehHHHHhHHHHHHHHHHHHHH
Confidence 344556666777888888887765532 22334566777666665555443
No 307
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=29.98 E-value=4.7e+02 Score=24.56 Aligned_cols=36 Identities=14% Similarity=0.503 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhhhHHHHHHHH
Q 008096 176 YYFVMGAAVLVAVTVLVYIQDNVGWNWGLGIPTVAMF 212 (577)
Q Consensus 176 ~~~~~~ig~~lg~~i~~~l~~~~gw~~~f~~~~~~~~ 212 (577)
.+...-++..+|..+++.+.+..+. ++++++.+..+
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~ 202 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGF-WALLLPALLLL 202 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 3444556666666677777776664 44555554433
No 308
>PRK11588 hypothetical protein; Provisional
Probab=29.78 E-value=2e+02 Score=31.46 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=13.3
Q ss_pred HHHHHHHhhhhhhhhccccccCCC
Q 008096 370 SMLSTIALYDRIIIPVARKFTGLD 393 (577)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~r~~~~~ 393 (577)
.++.-.-.++..+.++.+|..+|.
T Consensus 124 ~vi~~TGAi~~~i~~l~~k~~~~~ 147 (506)
T PRK11588 124 GIVMRTGTIDNGILALIRKTRGNE 147 (506)
T ss_pred HHHHHhchHHHHHHHHHHHhCCCc
Confidence 334444445555666777765543
No 309
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=29.47 E-value=4.3e+02 Score=28.74 Aligned_cols=30 Identities=20% Similarity=0.110 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHhccCCcccchhhhhhccC
Q 008096 129 LAILYASLLLAALGSGGIRPCVVAFGADQF 158 (577)
Q Consensus 129 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 158 (577)
..++-.+|.+++.+.-+..|...+++...-
T Consensus 304 ~~ifs~SR~~~~~areG~LP~~~s~i~~~~ 333 (479)
T KOG1287|consen 304 SVIFSSSRLFYAGAREGHLPAFFSMISVRR 333 (479)
T ss_pred hHHHHHHHHHHHHHHccCccHHHHhhcCCC
Confidence 345677899999999999999999888654
No 310
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=29.19 E-value=4.8e+02 Score=24.64 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcccCc
Q 008096 446 WLVPQYSLHGIAEAFMSVGHLEFLYDQAPE 475 (577)
Q Consensus 446 ~l~~~~~l~gi~~~~~~~~~~~~v~~~~P~ 475 (577)
.........++.|++.+.....+....-|+
T Consensus 175 ~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP~ 204 (205)
T PF01891_consen 175 AYLPSHLLLAFPEGFLTGMVVTFLVVYRPE 204 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345566677888999988887777666553
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=26.55 E-value=3.1e+02 Score=24.83 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=46.8
Q ss_pred hhhhhhhccchhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccccchhHHHHHHHHHHHhccCCcccchhh
Q 008096 73 GAFVADTYAGRFWTITVASIIYQIGMFSLTLSAILPQLRPPPCQGDQVCKEADTGQLAILYASLLLAALGSGGIRPCVVA 152 (577)
Q Consensus 73 ~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 152 (577)
-=.++||. .|++.+.+.+-.++|...+...-.+-. ....+-+++..++.....+|+|.-+ ..+.
T Consensus 54 P~~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~-----------~~~~dvP~~~~~~~S~~~Fg~gllG---isYG 117 (153)
T PF11947_consen 54 PEVVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKS-----------RQIVDVPPWAVLLVSLVFFGLGLLG---ISYG 117 (153)
T ss_pred CHHHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHh-----------ccccccCchHHHHHHHHHHHHHHHh---hhhh
Confidence 34578998 445555455555555444433211111 0111223455555555555555433 3344
Q ss_pred hhhccCCCCCchhhhhhhhhhhHHHHHHHHHHHH
Q 008096 153 FGADQFDETDPKQATKTWKYFNWYYFVMGAAVLV 186 (577)
Q Consensus 153 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 186 (577)
.++.--++++ -|..+|+-..-.|++-+.
T Consensus 118 ilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 4444445554 678888877777776543
No 312
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=26.44 E-value=2.1e+02 Score=31.00 Aligned_cols=22 Identities=14% Similarity=0.307 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHhhhhhcccccc
Q 008096 534 TLLQVVNVIYYFFCAKIYTFKP 555 (577)
Q Consensus 534 ~~~~~~~~i~~~~~~~~~~~~~ 555 (577)
.+..++...+.....++.++++
T Consensus 205 ~i~~~i~~~~~~~ya~kv~~~p 226 (465)
T PF03606_consen 205 VIFTLIAIAYVHRYAQKVKKDP 226 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3334444433333344444443
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.41 E-value=1.3e+02 Score=25.09 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=19.5
Q ss_pred HhhhhchhhhhhhhhhccchhHHHHHHHHHHHH
Q 008096 64 GTGSLTPLIGAFVADTYAGRFWTITVASIIYQI 96 (577)
Q Consensus 64 ~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~i 96 (577)
++..+...+.|+.-|+.++.++.+.+.+++..+
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 334455566777778776877755555444333
No 314
>PRK11469 hypothetical protein; Provisional
Probab=25.58 E-value=4.4e+02 Score=24.65 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=32.2
Q ss_pred CCChHHHHHHHHHHhHhhhhchh-hhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 008096 49 HMPLTKAANTLTNFGGTGSLTPL-IGAFVADTYAGRFWTITVASIIYQIGMFSL 101 (577)
Q Consensus 49 g~s~~~~~~i~~~~~~~~~~~~~-~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 101 (577)
|.+.-....+.+...+....... ++.++.+++ |||.-+.-|.++..+|.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 44555556666666665555555 444455555 88888887777777765443
No 315
>PRK15049 L-asparagine permease; Provisional
Probab=24.41 E-value=7.4e+02 Score=26.98 Aligned_cols=15 Identities=13% Similarity=0.056 Sum_probs=6.7
Q ss_pred CchhHHHHHHHHHHH
Q 008096 397 TFLHRMGIGFVISVL 411 (577)
Q Consensus 397 ~~~~~~~ig~~~~~l 411 (577)
.|...+....++..+
T Consensus 351 ~P~~Ail~~~~i~~l 365 (499)
T PRK15049 351 VPYAGILATLVVYVV 365 (499)
T ss_pred CCHHHHHHHHHHHHH
Confidence 455444444443333
No 316
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.82 E-value=4.3e+02 Score=21.66 Aligned_cols=28 Identities=14% Similarity=0.084 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHhhhhhccccccccccc
Q 008096 533 ITLLQVVNVIYYFFCAKIYTFKPIQMHQ 560 (577)
Q Consensus 533 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 560 (577)
.++..++.+++.+--+|.+++.+....+
T Consensus 56 vg~~~v~t~li~LPpwP~y~rn~LkW~~ 83 (101)
T KOG4112|consen 56 VGAGFVFTLLITLPPWPWYRRNPLKWAQ 83 (101)
T ss_pred HHHHHHHHHHhcCCCchhhhcCcccccC
Confidence 3333444445555455666665555443
No 317
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.63 E-value=1.8e+02 Score=23.70 Aligned_cols=28 Identities=7% Similarity=0.195 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccch
Q 008096 173 FNWYYFVMGAAVLVAVTVLVYIQDNVGWN 201 (577)
Q Consensus 173 ~~~~~~~~~ig~~lg~~i~~~l~~~~gw~ 201 (577)
=-+++....+|+++| .+.|+..++++|-
T Consensus 25 Er~~q~ilti~aiVg-~i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 25 ERFQQLILTIGAIVG-FIYGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 334555667888888 4667777777774
Done!